BLASTX nr result

ID: Panax25_contig00032613 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00032613
         (427 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017249808.1 PREDICTED: THO complex subunit 7B-like [Daucus ca...    55   2e-06
KZM92898.1 hypothetical protein DCAR_016143 [Daucus carota subsp...    55   2e-06
XP_017244327.1 PREDICTED: THO complex subunit 7B-like isoform X2...    55   3e-06
XP_017244325.1 PREDICTED: THO complex subunit 7B-like isoform X1...    55   3e-06

>XP_017249808.1 PREDICTED: THO complex subunit 7B-like [Daucus carota subsp.
           sativus]
          Length = 240

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 25/34 (73%), Positives = 31/34 (91%)
 Frame = -2

Query: 387 KEPRSLIEDMRNAMDEHKNGVEDASGASEAMAVD 286
           +EPRSL+E+MRNAM++HKNGVEDAS   +AMAVD
Sbjct: 207 EEPRSLMEEMRNAMEDHKNGVEDASCGPDAMAVD 240


>KZM92898.1 hypothetical protein DCAR_016143 [Daucus carota subsp. sativus]
          Length = 296

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 25/34 (73%), Positives = 31/34 (91%)
 Frame = -2

Query: 387 KEPRSLIEDMRNAMDEHKNGVEDASGASEAMAVD 286
           +EPRSL+E+MRNAM++HKNGVEDAS   +AMAVD
Sbjct: 263 EEPRSLMEEMRNAMEDHKNGVEDASCGPDAMAVD 296


>XP_017244327.1 PREDICTED: THO complex subunit 7B-like isoform X2 [Daucus carota
           subsp. sativus]
          Length = 240

 Score = 55.1 bits (131), Expect = 3e-06
 Identities = 24/34 (70%), Positives = 31/34 (91%)
 Frame = -2

Query: 387 KEPRSLIEDMRNAMDEHKNGVEDASGASEAMAVD 286
           +EPRSL+E+MRNAM++HKNG+EDAS   +AMAVD
Sbjct: 207 EEPRSLMEEMRNAMEDHKNGIEDASCGPDAMAVD 240


>XP_017244325.1 PREDICTED: THO complex subunit 7B-like isoform X1 [Daucus carota
           subsp. sativus]
          Length = 277

 Score = 55.1 bits (131), Expect = 3e-06
 Identities = 24/34 (70%), Positives = 31/34 (91%)
 Frame = -2

Query: 387 KEPRSLIEDMRNAMDEHKNGVEDASGASEAMAVD 286
           +EPRSL+E+MRNAM++HKNG+EDAS   +AMAVD
Sbjct: 244 EEPRSLMEEMRNAMEDHKNGIEDASCGPDAMAVD 277


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