BLASTX nr result
ID: Panax25_contig00032465
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax25_contig00032465
(392 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_017236412.1 PREDICTED: probable pre-mRNA-splicing factor ATP-... 59 1e-07
CAA16726.1 RNA helicase - like protein [Arabidopsis thaliana] CA... 58 3e-07
XP_012091721.1 PREDICTED: probable ATP-dependent RNA helicase DH... 57 5e-07
XP_013652932.1 PREDICTED: probable ATP-dependent RNA helicase DH... 57 6e-07
XP_013652622.1 PREDICTED: probable ATP-dependent RNA helicase DH... 57 7e-07
XP_009131789.1 PREDICTED: probable pre-mRNA-splicing factor ATP-... 57 7e-07
XP_013725991.1 PREDICTED: probable ATP-dependent RNA helicase DH... 57 7e-07
XP_018471258.1 PREDICTED: probable pre-mRNA-splicing factor ATP-... 57 7e-07
XP_013671011.1 PREDICTED: probable ATP-dependent RNA helicase DH... 57 7e-07
CDX78859.1 BnaA01g09260D [Brassica napus] 57 7e-07
CDX99466.1 BnaC01g10860D [Brassica napus] 57 7e-07
EOY28093.1 RNA helicase family protein isoform 6, partial [Theob... 57 9e-07
EOY28090.1 RNA helicase family protein isoform 3 [Theobroma cacao] 57 9e-07
EOY28089.1 RNA helicase family protein isoform 2, partial [Theob... 57 9e-07
XP_017979401.1 PREDICTED: probable pre-mRNA-splicing factor ATP-... 57 9e-07
EOY28091.1 RNA helicase family protein isoform 4 [Theobroma cacao] 57 9e-07
XP_017979400.1 PREDICTED: probable pre-mRNA-splicing factor ATP-... 57 9e-07
XP_007025466.2 PREDICTED: probable pre-mRNA-splicing factor ATP-... 57 9e-07
EOY28088.1 RNA helicase family protein isoform 1 [Theobroma cacao] 57 9e-07
OMO65285.1 hypothetical protein COLO4_31356 [Corchorus olitorius] 57 9e-07
>XP_017236412.1 PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase DEAH9 [Daucus carota subsp. sativus]
Length = 692
Score = 58.9 bits (141), Expect = 1e-07
Identities = 29/30 (96%), Positives = 30/30 (100%)
Frame = +2
Query: 68 DPMISKMILASNELGCSEEILTIAAILSIQ 157
DPMISKMILASNELGCSEEILTIAA+LSIQ
Sbjct: 484 DPMISKMILASNELGCSEEILTIAAVLSIQ 513
>CAA16726.1 RNA helicase - like protein [Arabidopsis thaliana] CAB78848.1 RNA
helicase-like protein [Arabidopsis thaliana]
Length = 982
Score = 58.2 bits (139), Expect = 3e-07
Identities = 28/36 (77%), Positives = 32/36 (88%)
Frame = +2
Query: 68 DPMISKMILASNELGCSEEILTIAAILSIQVNILPP 175
DPMISKMILAS+ELGCS EI+TIAA+LS+QV L P
Sbjct: 744 DPMISKMILASSELGCSHEIITIAAVLSVQVKALYP 779
>XP_012091721.1 PREDICTED: probable ATP-dependent RNA helicase DHX35 isoform X2
[Jatropha curcas]
Length = 641
Score = 57.4 bits (137), Expect = 5e-07
Identities = 29/39 (74%), Positives = 33/39 (84%)
Frame = +2
Query: 41 SNRNSNFI*DPMISKMILASNELGCSEEILTIAAILSIQ 157
SN S I DPMISKMIL+SN+ GCSEEI+TIAA+LSIQ
Sbjct: 425 SNLVSTVIQDPMISKMILSSNQFGCSEEIITIAAVLSIQ 463
>XP_013652932.1 PREDICTED: probable ATP-dependent RNA helicase DHX35, partial
[Brassica napus]
Length = 456
Score = 57.0 bits (136), Expect = 6e-07
Identities = 27/30 (90%), Positives = 30/30 (100%)
Frame = +2
Query: 68 DPMISKMILASNELGCSEEILTIAAILSIQ 157
DPMISKMILASNELGCS+EI+TIAA+LSIQ
Sbjct: 251 DPMISKMILASNELGCSDEIITIAAVLSIQ 280
>XP_013652622.1 PREDICTED: probable ATP-dependent RNA helicase DHX35 [Brassica
napus]
Length = 615
Score = 57.0 bits (136), Expect = 7e-07
Identities = 27/30 (90%), Positives = 30/30 (100%)
Frame = +2
Query: 68 DPMISKMILASNELGCSEEILTIAAILSIQ 157
DPMISKMILASNELGCS+EI+TIAA+LSIQ
Sbjct: 409 DPMISKMILASNELGCSDEIITIAAVLSIQ 438
>XP_009131789.1 PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase DEAH9 [Brassica rapa]
Length = 693
Score = 57.0 bits (136), Expect = 7e-07
Identities = 27/30 (90%), Positives = 30/30 (100%)
Frame = +2
Query: 68 DPMISKMILASNELGCSEEILTIAAILSIQ 157
DPMISKMILASNELGCS+EI+TIAA+LSIQ
Sbjct: 489 DPMISKMILASNELGCSDEIITIAAVLSIQ 518
>XP_013725991.1 PREDICTED: probable ATP-dependent RNA helicase DHX35 [Brassica
napus]
Length = 694
Score = 57.0 bits (136), Expect = 7e-07
Identities = 27/30 (90%), Positives = 30/30 (100%)
Frame = +2
Query: 68 DPMISKMILASNELGCSEEILTIAAILSIQ 157
DPMISKMILASNELGCS+EI+TIAA+LSIQ
Sbjct: 489 DPMISKMILASNELGCSDEIITIAAVLSIQ 518
>XP_018471258.1 PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase DEAH9 [Raphanus sativus]
Length = 695
Score = 57.0 bits (136), Expect = 7e-07
Identities = 27/30 (90%), Positives = 30/30 (100%)
Frame = +2
Query: 68 DPMISKMILASNELGCSEEILTIAAILSIQ 157
DPMISKMILASNELGCS+EI+TIAA+LSIQ
Sbjct: 489 DPMISKMILASNELGCSDEIITIAAVLSIQ 518
>XP_013671011.1 PREDICTED: probable ATP-dependent RNA helicase DHX35 [Brassica
napus]
Length = 695
Score = 57.0 bits (136), Expect = 7e-07
Identities = 27/30 (90%), Positives = 30/30 (100%)
Frame = +2
Query: 68 DPMISKMILASNELGCSEEILTIAAILSIQ 157
DPMISKMILASNELGCS+EI+TIAA+LSIQ
Sbjct: 489 DPMISKMILASNELGCSDEIITIAAVLSIQ 518
>CDX78859.1 BnaA01g09260D [Brassica napus]
Length = 698
Score = 57.0 bits (136), Expect = 7e-07
Identities = 27/30 (90%), Positives = 30/30 (100%)
Frame = +2
Query: 68 DPMISKMILASNELGCSEEILTIAAILSIQ 157
DPMISKMILASNELGCS+EI+TIAA+LSIQ
Sbjct: 492 DPMISKMILASNELGCSDEIITIAAVLSIQ 521
>CDX99466.1 BnaC01g10860D [Brassica napus]
Length = 700
Score = 57.0 bits (136), Expect = 7e-07
Identities = 27/30 (90%), Positives = 30/30 (100%)
Frame = +2
Query: 68 DPMISKMILASNELGCSEEILTIAAILSIQ 157
DPMISKMILASNELGCS+EI+TIAA+LSIQ
Sbjct: 494 DPMISKMILASNELGCSDEIITIAAVLSIQ 523
>EOY28093.1 RNA helicase family protein isoform 6, partial [Theobroma cacao]
Length = 470
Score = 56.6 bits (135), Expect = 9e-07
Identities = 27/30 (90%), Positives = 30/30 (100%)
Frame = +2
Query: 68 DPMISKMILASNELGCSEEILTIAAILSIQ 157
+PMISKMILASNELGCSEEI+TIAA+LSIQ
Sbjct: 353 EPMISKMILASNELGCSEEIITIAAVLSIQ 382
>EOY28090.1 RNA helicase family protein isoform 3 [Theobroma cacao]
Length = 498
Score = 56.6 bits (135), Expect = 9e-07
Identities = 27/30 (90%), Positives = 30/30 (100%)
Frame = +2
Query: 68 DPMISKMILASNELGCSEEILTIAAILSIQ 157
+PMISKMILASNELGCSEEI+TIAA+LSIQ
Sbjct: 353 EPMISKMILASNELGCSEEIITIAAVLSIQ 382
>EOY28089.1 RNA helicase family protein isoform 2, partial [Theobroma cacao]
Length = 521
Score = 56.6 bits (135), Expect = 9e-07
Identities = 27/30 (90%), Positives = 30/30 (100%)
Frame = +2
Query: 68 DPMISKMILASNELGCSEEILTIAAILSIQ 157
+PMISKMILASNELGCSEEI+TIAA+LSIQ
Sbjct: 353 EPMISKMILASNELGCSEEIITIAAVLSIQ 382
>XP_017979401.1 PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase DEAH9 isoform X4 [Theobroma cacao]
Length = 561
Score = 56.6 bits (135), Expect = 9e-07
Identities = 27/30 (90%), Positives = 30/30 (100%)
Frame = +2
Query: 68 DPMISKMILASNELGCSEEILTIAAILSIQ 157
+PMISKMILASNELGCSEEI+TIAA+LSIQ
Sbjct: 353 EPMISKMILASNELGCSEEIITIAAVLSIQ 382
>EOY28091.1 RNA helicase family protein isoform 4 [Theobroma cacao]
Length = 575
Score = 56.6 bits (135), Expect = 9e-07
Identities = 27/30 (90%), Positives = 30/30 (100%)
Frame = +2
Query: 68 DPMISKMILASNELGCSEEILTIAAILSIQ 157
+PMISKMILASNELGCSEEI+TIAA+LSIQ
Sbjct: 489 EPMISKMILASNELGCSEEIITIAAVLSIQ 518
>XP_017979400.1 PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase DEAH9 isoform X2 [Theobroma cacao]
Length = 673
Score = 56.6 bits (135), Expect = 9e-07
Identities = 27/30 (90%), Positives = 30/30 (100%)
Frame = +2
Query: 68 DPMISKMILASNELGCSEEILTIAAILSIQ 157
+PMISKMILASNELGCSEEI+TIAA+LSIQ
Sbjct: 489 EPMISKMILASNELGCSEEIITIAAVLSIQ 518
>XP_007025466.2 PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase DEAH9 isoform X1 [Theobroma cacao]
Length = 697
Score = 56.6 bits (135), Expect = 9e-07
Identities = 27/30 (90%), Positives = 30/30 (100%)
Frame = +2
Query: 68 DPMISKMILASNELGCSEEILTIAAILSIQ 157
+PMISKMILASNELGCSEEI+TIAA+LSIQ
Sbjct: 489 EPMISKMILASNELGCSEEIITIAAVLSIQ 518
>EOY28088.1 RNA helicase family protein isoform 1 [Theobroma cacao]
Length = 697
Score = 56.6 bits (135), Expect = 9e-07
Identities = 27/30 (90%), Positives = 30/30 (100%)
Frame = +2
Query: 68 DPMISKMILASNELGCSEEILTIAAILSIQ 157
+PMISKMILASNELGCSEEI+TIAA+LSIQ
Sbjct: 489 EPMISKMILASNELGCSEEIITIAAVLSIQ 518
>OMO65285.1 hypothetical protein COLO4_31356 [Corchorus olitorius]
Length = 1181
Score = 56.6 bits (135), Expect = 9e-07
Identities = 27/30 (90%), Positives = 30/30 (100%)
Frame = +2
Query: 68 DPMISKMILASNELGCSEEILTIAAILSIQ 157
+PMISKMILASNELGCSEEI+TIAA+LSIQ
Sbjct: 463 EPMISKMILASNELGCSEEIITIAAVLSIQ 492