BLASTX nr result
ID: Panax25_contig00032410
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax25_contig00032410
(1449 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
OAY41279.1 hypothetical protein MANES_09G088300 [Manihot esculenta] 75 1e-20
OMO65780.1 reverse transcriptase [Corchorus capsularis] 76 4e-20
OAY22117.1 hypothetical protein MANES_S028300 [Manihot esculenta] 74 6e-20
OAY47186.1 hypothetical protein MANES_06G059200 [Manihot esculenta] 75 7e-20
XP_015385965.1 PREDICTED: uncharacterized protein LOC107177137 [... 67 9e-20
OMO88470.1 reverse transcriptase [Corchorus capsularis] 65 3e-19
EOY24207.1 Non-LTR retroelement reverse transcriptase [Theobroma... 67 6e-19
EOY25852.1 Non-LTR retroelement reverse transcriptase [Theobroma... 73 1e-18
XP_016200339.1 PREDICTED: uncharacterized protein LOC107641359 [... 86 5e-18
OMO81305.1 reverse transcriptase [Corchorus capsularis] 63 8e-18
EOY25817.1 Non-LTR retroelement reverse transcriptase [Theobroma... 70 2e-17
XP_016162229.1 PREDICTED: uncharacterized protein LOC107605009 [... 73 1e-16
OMP05267.1 reverse transcriptase [Corchorus capsularis] 69 1e-16
OMO85295.1 reverse transcriptase [Corchorus capsularis] 78 4e-16
AID60103.1 hypothetical protein [Brassica napus] 69 5e-16
OMO86377.1 reverse transcriptase [Corchorus capsularis] 60 6e-16
AAC63844.1 putative non-LTR retroelement reverse transcriptase [... 61 6e-16
XP_012461277.1 PREDICTED: uncharacterized protein LOC105781288 [... 87 1e-15
XP_015936169.1 PREDICTED: uncharacterized protein LOC107462117 [... 65 1e-15
GAU51253.1 hypothetical protein TSUD_412460, partial [Trifolium ... 60 2e-15
>OAY41279.1 hypothetical protein MANES_09G088300 [Manihot esculenta]
Length = 348
Score = 75.1 bits (183), Expect(3) = 1e-20
Identities = 36/93 (38%), Positives = 60/93 (64%)
Frame = +2
Query: 527 IRWFPPPTHTIKINTDSSVLPSSNFAGAAAVLRDSQGVWIAGTSRKLMGVSVPITELWAI 706
++W PP + IK+NTD + ++ A V+R+S+G W+AG +R + S+ ELWAI
Sbjct: 175 VKWNLPPVNWIKLNTDGAWDSTTGIGKAGGVIRNSEGAWLAGYNRLVGVSSIHNAELWAI 234
Query: 707 KDGLSLAWDMGFKSIIVESDVGTILDQRLLFTI 805
DGL+LAW+M F+ ++V+ D ++ +LL T+
Sbjct: 235 FDGLTLAWNMNFRRLVVDCDNARLV--KLLKTV 265
Score = 42.0 bits (97), Expect(3) = 1e-20
Identities = 25/101 (24%), Positives = 44/101 (43%), Gaps = 4/101 (3%)
Frame = +3
Query: 123 LLLSERKHKKGIRNSED----SIRSISNSNALRDCFFARKFWQRLHYYSAAEDFFRWAIS 290
+L +E + ++G+ N+E S + LRDC + W+ + + FF +++
Sbjct: 36 ILTNEERFRRGLTNNEACGLCGTHQESVLHVLRDCRMIKSVWREVVAPAKQGAFFSLSLT 95
Query: 291 NWLEKNLSLSSLEAFPHISWQLICTLGAWTLWLNRISQVFD 413
WL N+ S SW I ++ W W R VF+
Sbjct: 96 EWLNANICSSVKFNNEDFSWFSIFSIVCWFAWKQRNDLVFN 136
Score = 32.7 bits (73), Expect(3) = 1e-20
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +1
Query: 817 LLLDCRNLFDRPWVVDLRSIYREGNCMADVIAK 915
LL + L +R W+V + ++RE N +AD +AK
Sbjct: 274 LLARIKELLNRDWIVKFQYVFREANLVADSVAK 306
>OMO65780.1 reverse transcriptase [Corchorus capsularis]
Length = 1712
Score = 75.9 bits (185), Expect(3) = 4e-20
Identities = 38/86 (44%), Positives = 48/86 (55%)
Frame = +2
Query: 527 IRWFPPPTHTIKINTDSSVLPSSNFAGAAAVLRDSQGVWIAGTSRKLMGVSVPITELWAI 706
I W P +KINTD S +N A V+R S G W+ G S+ + S+ + ELW I
Sbjct: 1543 IGWEKPKEGQVKINTDGSWFQRTNEAAVGGVVRGSCGEWLLGFSQSVGECSIDLAELWGI 1602
Query: 707 KDGLSLAWDMGFKSIIVESDVGTILD 784
GLSLAW GF I+VESD T +D
Sbjct: 1603 LQGLSLAWSRGFNDIVVESDSATSVD 1628
Score = 42.4 bits (98), Expect(3) = 4e-20
Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Frame = +3
Query: 198 NALRDCFFARKFWQRLHYYSAAE-DFFRWAISNWLEKNLSLSSLEAFPHISWQLICTLGA 374
+ LRDC A++ W H+ A++ +FFR + + W NL W LI + A
Sbjct: 1435 HVLRDCPHAKEVWN--HWVGASDTNFFRCSEAQWWNANLIDQKNRLIGDWPWSLIFAVTA 1492
Query: 375 WTLWLNRISQVFDPKPVTISS 437
W +W R F K T+S+
Sbjct: 1493 WRIWKWRNEGCFANKSYTVST 1513
Score = 29.6 bits (65), Expect(3) = 4e-20
Identities = 18/68 (26%), Positives = 31/68 (45%)
Frame = +1
Query: 799 HNHLLPLLLDCRNLFDRPWVVDLRSIYREGNCMADVIAKNACNQPDVFCCFSVPLMYALK 978
H H ++ ++ + W L I RE N +AD +AKN+ ++ + ++ P L
Sbjct: 1638 HPHFC-IIAAIQDYLSKEWTCQLHYIPREKNFVADWMAKNSSDRHEGIMIYNTPPAGVLN 1696
Query: 979 SFEEDNVG 1002
D VG
Sbjct: 1697 LLIADAVG 1704
>OAY22117.1 hypothetical protein MANES_S028300 [Manihot esculenta]
Length = 547
Score = 73.6 bits (179), Expect(3) = 6e-20
Identities = 33/80 (41%), Positives = 53/80 (66%)
Frame = +2
Query: 527 IRWFPPPTHTIKINTDSSVLPSSNFAGAAAVLRDSQGVWIAGTSRKLMGVSVPITELWAI 706
++W PP + IK+NTD + ++ A V+R+S+G W+AG +R + S+ ELWAI
Sbjct: 374 VKWNLPPVNWIKLNTDGAWDSTTGIDKAGGVIRNSEGAWLAGYNRLVGVSSIYNAELWAI 433
Query: 707 KDGLSLAWDMGFKSIIVESD 766
DGL+LAW+M F+ ++V+ D
Sbjct: 434 FDGLTLAWNMNFRRLVVDCD 453
Score = 40.8 bits (94), Expect(3) = 6e-20
Identities = 25/101 (24%), Positives = 43/101 (42%), Gaps = 4/101 (3%)
Frame = +3
Query: 123 LLLSERKHKKGIRNSED----SIRSISNSNALRDCFFARKFWQRLHYYSAAEDFFRWAIS 290
+L +E + ++G+ N+E S + LRDC + W+ + + FF ++
Sbjct: 235 ILTNEERFRRGLTNNEACGLCGAHQESVLHVLRDCRMIKSVWREMVAPAKQGVFFSLSLI 294
Query: 291 NWLEKNLSLSSLEAFPHISWQLICTLGAWTLWLNRISQVFD 413
WL N+ S SW I ++ W W R VF+
Sbjct: 295 EWLNANICSSVKFNNEDFSWCSIFSIVCWFAWKQRNDLVFN 335
Score = 33.1 bits (74), Expect(3) = 6e-20
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +1
Query: 817 LLLDCRNLFDRPWVVDLRSIYREGNCMADVIAK 915
LL + L +R W+V + ++RE N +AD +AK
Sbjct: 473 LLARIKELLNRDWIVKFQHVFREANLVADSVAK 505
>OAY47186.1 hypothetical protein MANES_06G059200 [Manihot esculenta]
Length = 709
Score = 75.1 bits (183), Expect(3) = 7e-20
Identities = 36/93 (38%), Positives = 60/93 (64%)
Frame = +2
Query: 527 IRWFPPPTHTIKINTDSSVLPSSNFAGAAAVLRDSQGVWIAGTSRKLMGVSVPITELWAI 706
++W PP + IK+NTD + ++ A V+R+S+G W+AG +R + S+ ELWAI
Sbjct: 536 VKWNLPPVNWIKLNTDGAWDSTTGIGKAGGVIRNSEGAWLAGYNRLVGVSSIHNAELWAI 595
Query: 707 KDGLSLAWDMGFKSIIVESDVGTILDQRLLFTI 805
DGL+LAW+M F+ ++V+ D ++ +LL T+
Sbjct: 596 FDGLTLAWNMNFRRLVVDCDNARLV--KLLKTV 626
Score = 41.2 bits (95), Expect(3) = 7e-20
Identities = 25/101 (24%), Positives = 44/101 (43%), Gaps = 4/101 (3%)
Frame = +3
Query: 123 LLLSERKHKKGIRNSED----SIRSISNSNALRDCFFARKFWQRLHYYSAAEDFFRWAIS 290
+L +E + ++G+ N+E S + LRDC + W+ + + FF +++
Sbjct: 397 ILTNEERFRRGLTNNEACGLCGDHQESMLHVLRDCRMIKSVWREVVAPAKQGVFFSLSLT 456
Query: 291 NWLEKNLSLSSLEAFPHISWQLICTLGAWTLWLNRISQVFD 413
WL N+ S SW I ++ W W R VF+
Sbjct: 457 EWLNANICSSVKFNNEDFSWCSIFSIVCWFAWKQRNDLVFN 497
Score = 30.8 bits (68), Expect(3) = 7e-20
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +1
Query: 817 LLLDCRNLFDRPWVVDLRSIYREGNCMADVIAK 915
LL + L +R W+V + ++RE N +AD + K
Sbjct: 635 LLARIKELLNRDWIVKFQHVFREANLVADSMTK 667
>XP_015385965.1 PREDICTED: uncharacterized protein LOC107177137 [Citrus sinensis]
Length = 1277
Score = 67.0 bits (162), Expect(3) = 9e-20
Identities = 33/81 (40%), Positives = 44/81 (54%)
Frame = +2
Query: 524 FIRWFPPPTHTIKINTDSSVLPSSNFAGAAAVLRDSQGVWIAGTSRKLMGVSVPITELWA 703
+I W PPP K+NTD AGA+ ++RDS G WI G + SV + ELW
Sbjct: 1107 YIGWLPPPWPWCKLNTDGFCRKDKR-AGASGIIRDSVGHWITGFCMNIGESSVLMAELWG 1165
Query: 704 IKDGLSLAWDMGFKSIIVESD 766
+ GL L W+ G K ++VE D
Sbjct: 1166 LYQGLRLTWEAGIKRLLVEVD 1186
Score = 40.0 bits (92), Expect(3) = 9e-20
Identities = 21/57 (36%), Positives = 28/57 (49%)
Frame = +1
Query: 790 IIVHNHLLPLLLDCRNLFDRPWVVDLRSIYREGNCMADVIAKNACNQPDVFCCFSVP 960
++V N L++ R L R W V + IYRE N AD +A A + P FS P
Sbjct: 1198 VVVPNEFYALVVAIRELISRNWQVSITHIYREANSAADFMANMAHSYPHGLHLFSSP 1254
Score = 39.7 bits (91), Expect(3) = 9e-20
Identities = 21/82 (25%), Positives = 39/82 (47%)
Frame = +3
Query: 198 NALRDCFFARKFWQRLHYYSAAEDFFRWAISNWLEKNLSLSSLEAFPHISWQLICTLGAW 377
+ LRDC+ ++ W R+ FF+ ++ +W+ NL P +SW+ I + W
Sbjct: 999 HVLRDCYCIKRVWLRIVPARHHSSFFQSSLQDWIIANLQNKWNIPSP-LSWECIFGVAVW 1057
Query: 378 TLWLNRISQVFDPKPVTISSLF 443
LW R + + K S+++
Sbjct: 1058 RLWYWRNHFIVEGKLADSSTVY 1079
>OMO88470.1 reverse transcriptase [Corchorus capsularis]
Length = 1768
Score = 65.1 bits (157), Expect(3) = 3e-19
Identities = 31/85 (36%), Positives = 45/85 (52%)
Frame = +2
Query: 527 IRWFPPPTHTIKINTDSSVLPSSNFAGAAAVLRDSQGVWIAGTSRKLMGVSVPITELWAI 706
+ W PP K+N+D SV + AG+ +RD QG W+AG SRK+ S E W +
Sbjct: 1598 VSWIPPLQGWFKLNSDGSVEGNPGIAGSGGAIRDDQGQWVAGYSRKIGYTSSLQAEFWGL 1657
Query: 707 KDGLSLAWDMGFKSIIVESDVGTIL 781
+DGL LA G + + V D ++
Sbjct: 1658 RDGLILAHSKGIQKLEVNVDALNVI 1682
Score = 44.7 bits (104), Expect(3) = 3e-19
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Frame = +3
Query: 198 NALRDCFFARKFWQRLHYYSAAEDFF-RWAISNWLEKNLSLSSLEAFPHISWQLICTLGA 374
+ LRDC FA + WQ +S ++FF +I +W++ NLS S +F + W +
Sbjct: 1493 HVLRDCTFATEVWQS---FSLPDNFFDSLSIKDWIDLNLSSSM--SFRNTPWPTLFAYSC 1547
Query: 375 WTLWLNRISQVF 410
W +W R S+ F
Sbjct: 1548 WAIWKARNSRTF 1559
Score = 35.4 bits (80), Expect(3) = 3e-19
Identities = 20/62 (32%), Positives = 28/62 (45%)
Frame = +1
Query: 817 LLLDCRNLFDRPWVVDLRSIYREGNCMADVIAKNACNQPDVFCCFSVPLMYALKSFEEDN 996
++ DCR L R ++L +REGN +AD +A N Q F F V + D
Sbjct: 1698 IIYDCRMLMQRFPCLNLSHCFREGNMVADALANNGRVQQMSFSVFDVIPYFVFDLLMADT 1757
Query: 997 VG 1002
G
Sbjct: 1758 AG 1759
>EOY24207.1 Non-LTR retroelement reverse transcriptase [Theobroma cacao]
Length = 391
Score = 67.4 bits (163), Expect(3) = 6e-19
Identities = 32/80 (40%), Positives = 44/80 (55%)
Frame = +2
Query: 527 IRWFPPPTHTIKINTDSSVLPSSNFAGAAAVLRDSQGVWIAGTSRKLMGVSVPITELWAI 706
+ W PPP I +N+D ++ A A VLRD+ G WI G + KL S ELW
Sbjct: 252 VGWSPPPKDWIAVNSDGVFKSAARTAAAGGVLRDAHGTWIVGYACKLETSSGLRVELWGF 311
Query: 707 KDGLSLAWDMGFKSIIVESD 766
GL LAW+ GF+ + ++SD
Sbjct: 312 YKGLQLAWERGFRKVKLQSD 331
Score = 48.9 bits (115), Expect(3) = 6e-19
Identities = 28/118 (23%), Positives = 53/118 (44%), Gaps = 14/118 (11%)
Frame = +3
Query: 120 CLLLSERKHKKGIRNSEDSIRSISNS--------------NALRDCFFARKFWQRLHYYS 257
CL L HK+ + N+E +S+ + LRDC ++ W+ + S
Sbjct: 100 CLFLFFCLHKRILTNAEGVRHKMSSDASCPHYYGAKETCLHVLRDCPASKTLWRNILPQS 159
Query: 258 AAEDFFRWAISNWLEKNLSLSSLEAFPHISWQLICTLGAWTLWLNRISQVFDPKPVTI 431
FF+ + +WL NL+L +L F + W ++ + W W R +F+ + +++
Sbjct: 160 GINQFFQTPLIDWLSSNLNLKNLYVF-DVPWNIVFGIACWYTWKWRNLFIFEGRELSV 216
Score = 27.7 bits (60), Expect(3) = 6e-19
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 811 LPLLLDCRNLFDRPWVVDLRSIYREGNCMADVIA 912
L L+ + + R W V++ IYRE N AD ++
Sbjct: 350 LDLIRAIKGMLGRHWEVNISHIYREANTTADFMS 383
>EOY25852.1 Non-LTR retroelement reverse transcriptase [Theobroma cacao]
Length = 1011
Score = 72.8 bits (177), Expect(2) = 1e-18
Identities = 34/80 (42%), Positives = 46/80 (57%)
Frame = +2
Query: 527 IRWFPPPTHTIKINTDSSVLPSSNFAGAAAVLRDSQGVWIAGTSRKLMGVSVPITELWAI 706
+ W PPP I +N+D + + A A VLRDS G WI G + KL SV ELW +
Sbjct: 878 VGWSPPPEDWIAVNSDGAFKSAVGIAAAGGVLRDSHGTWIVGYACKLETSSVFRAELWGV 937
Query: 707 KDGLSLAWDMGFKSIIVESD 766
GL LAW+ GF+ + ++SD
Sbjct: 938 YKGLQLAWERGFRKVKLQSD 957
Score = 50.1 bits (118), Expect(2) = 1e-18
Identities = 30/118 (25%), Positives = 53/118 (44%), Gaps = 14/118 (11%)
Frame = +3
Query: 120 CLLLSERKHKKGIRNSEDSIRSISNS--------------NALRDCFFARKFWQRLHYYS 257
CL L HK+ + N+E R +S+ + LRDC W+R+ S
Sbjct: 726 CLFLFFCLHKRILTNAERVRRKMSSDASCPHCYGVEETCLHVLRDCPALETLWRRILPQS 785
Query: 258 AAEDFFRWAISNWLEKNLSLSSLEAFPHISWQLICTLGAWTLWLNRISQVFDPKPVTI 431
FF+ + +WL NL+L +L F + W ++ + W W R +F+ + +++
Sbjct: 786 GINQFFQIPLIDWLSSNLNLKNLYVF-DVPWNIVLGITCWYTWKWRNLFIFEGRELSV 842
>XP_016200339.1 PREDICTED: uncharacterized protein LOC107641359 [Arachis ipaensis]
Length = 1095
Score = 86.3 bits (212), Expect(2) = 5e-18
Identities = 36/86 (41%), Positives = 53/86 (61%)
Frame = +2
Query: 527 IRWFPPPTHTIKINTDSSVLPSSNFAGAAAVLRDSQGVWIAGTSRKLMGVSVPITELWAI 706
IRW PPP IKINTD S L + FAG ++RD G W+AG + S E+W +
Sbjct: 924 IRWNPPPHGWIKINTDGSSLGNPEFAGCGGLIRDEHGRWVAGFMHNIGTCSASQAEMWGL 983
Query: 707 KDGLSLAWDMGFKSIIVESDVGTILD 784
++GL++ W++GF+ ++VE D +LD
Sbjct: 984 RNGLNMTWELGFRKVVVEMDSSVVLD 1009
Score = 34.7 bits (78), Expect(2) = 5e-18
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +1
Query: 814 PLLLDCRNLFDRPWVVDLRSIYREGNCMADVIAKNACNQPDVFCCFSVP 960
P++ L +R W+++ R +R+GN AD +AK + P F +P
Sbjct: 1023 PIIRSIDGLINREWMIEFRHTFRKGNRGADFLAKESLKCPPGFQFVDLP 1071
>OMO81305.1 reverse transcriptase [Corchorus capsularis]
Length = 1538
Score = 63.2 bits (152), Expect(3) = 8e-18
Identities = 31/86 (36%), Positives = 46/86 (53%)
Frame = +2
Query: 527 IRWFPPPTHTIKINTDSSVLPSSNFAGAAAVLRDSQGVWIAGTSRKLMGVSVPITELWAI 706
+RW PP +K+NTD + + AGA V+R + G W+ G L S EL AI
Sbjct: 1367 VRWVPPEDAVVKLNTDGAAKGNPGVAGAGGVIRSAVGSWLMGFKLHLGVCSNVEAELQAI 1426
Query: 707 KDGLSLAWDMGFKSIIVESDVGTILD 784
+ GL +AW+ ++ II E+D +D
Sbjct: 1427 RQGLLVAWNCSYRDIICETDALIAID 1452
Score = 40.4 bits (93), Expect(3) = 8e-18
Identities = 21/48 (43%), Positives = 24/48 (50%)
Frame = +1
Query: 817 LLLDCRNLFDRPWVVDLRSIYREGNCMADVIAKNACNQPDVFCCFSVP 960
LL+D R L R W L+ YREGN AD +A AC D F P
Sbjct: 1467 LLIDIRQLLHREWRCKLQHTYREGNFCADWLANAACELDDNFELLPAP 1514
Score = 36.6 bits (83), Expect(3) = 8e-18
Identities = 21/76 (27%), Positives = 37/76 (48%)
Frame = +3
Query: 204 LRDCFFARKFWQRLHYYSAAEDFFRWAISNWLEKNLSLSSLEAFPHISWQLICTLGAWTL 383
LRDC +RK W Y+ + ++ WL+ NL+L +L + W++I + W +
Sbjct: 1266 LRDCPTSRKVWD---YFG--KPLNSDSLMQWLDDNLALRTLH--DRVEWRIIFGVTLWRI 1318
Query: 384 WLNRISQVFDPKPVTI 431
W R V + V++
Sbjct: 1319 WTRRCGFVMNEGDVSL 1334
>EOY25817.1 Non-LTR retroelement reverse transcriptase [Theobroma cacao]
Length = 874
Score = 69.7 bits (169), Expect(2) = 2e-17
Identities = 32/80 (40%), Positives = 45/80 (56%)
Frame = +2
Query: 527 IRWFPPPTHTIKINTDSSVLPSSNFAGAAAVLRDSQGVWIAGTSRKLMGVSVPITELWAI 706
+ W PPP I +N D + ++ A VLRD+ G WI G + KL SV ELW +
Sbjct: 750 VGWSPPPEDWITVNLDGAFKSAARTTAAGGVLRDAHGTWIVGYACKLETSSVFRAELWGV 809
Query: 707 KDGLSLAWDMGFKSIIVESD 766
GL LAW+ GF+ + ++SD
Sbjct: 810 YKGLQLAWERGFRKVKLQSD 829
Score = 49.7 bits (117), Expect(2) = 2e-17
Identities = 29/118 (24%), Positives = 52/118 (44%), Gaps = 14/118 (11%)
Frame = +3
Query: 120 CLLLSERKHKKGIRNSEDSIRSISNS--------------NALRDCFFARKFWQRLHYYS 257
CL L HK+ + N+E R +S+ + LRDC + W+R+ S
Sbjct: 598 CLFLFFCLHKRILTNAERVRRKMSSDASCPHCYGVEETCLHVLRDCLASETLWRRILPES 657
Query: 258 AAEDFFRWAISNWLEKNLSLSSLEAFPHISWQLICTLGAWTLWLNRISQVFDPKPVTI 431
FF+ + +WL NL+L +L F + W ++ W W +F+ + +++
Sbjct: 658 GINQFFQIPLIDWLSSNLNLKNLYVF-DVPWNIVFGTTCWYTWKRSNLFIFEGRELSV 714
>XP_016162229.1 PREDICTED: uncharacterized protein LOC107605009 [Arachis ipaensis]
Length = 1371
Score = 73.2 bits (178), Expect(3) = 1e-16
Identities = 33/85 (38%), Positives = 48/85 (56%)
Frame = +2
Query: 533 WFPPPTHTIKINTDSSVLPSSNFAGAAAVLRDSQGVWIAGTSRKLMGVSVPITELWAIKD 712
W PPP +K+NTD SV + AG +LR QG WI G + L + E+WA+
Sbjct: 1203 WEPPPRGWVKLNTDGSVKEEAKKAGCGGLLRTQQGEWIGGFTANLGYCQITQAEMWAVLY 1262
Query: 713 GLSLAWDMGFKSIIVESDVGTILDQ 787
GL +AW++G + +IVE D +L +
Sbjct: 1263 GLQMAWNLGMRRVIVEMDAIEVLKE 1287
Score = 40.0 bits (92), Expect(3) = 1e-16
Identities = 24/77 (31%), Positives = 36/77 (46%)
Frame = +3
Query: 198 NALRDCFFARKFWQRLHYYSAAEDFFRWAISNWLEKNLSLSSLEAFPHISWQLICTLGAW 377
+ALRDC +A W L SA FF ++ WL+ NLS ++ H +W + W
Sbjct: 1089 HALRDCPYAASIWVELVQPSAIAVFFGMNLAEWLDFNLSNQIGKSSNH-NWIDEFFVACW 1147
Query: 378 TLWLNRISQVFDPKPVT 428
+W R +F + T
Sbjct: 1148 RIWKWRNQDLFSQQQAT 1164
Score = 23.1 bits (48), Expect(3) = 1e-16
Identities = 11/38 (28%), Positives = 18/38 (47%)
Frame = +1
Query: 814 PLLLDCRNLFDRPWVVDLRSIYREGNCMADVIAKNACN 927
P+L + +R W + + RE N AD + K + N
Sbjct: 1299 PILREIEEYKERSWEIKFQYANRETNQCADWLGKISTN 1336
>OMP05267.1 reverse transcriptase [Corchorus capsularis]
Length = 1911
Score = 68.9 bits (167), Expect(3) = 1e-16
Identities = 32/90 (35%), Positives = 54/90 (60%)
Frame = +2
Query: 515 YIDFIRWFPPPTHTIKINTDSSVLPSSNFAGAAAVLRDSQGVWIAGTSRKLMGVSVPITE 694
Y I+W PPP +K+NTD + + AGA ++RDSQG+++ G +++ + E
Sbjct: 1716 YTKQIQWTPPPAGFLKMNTDGASHGNPGLAGAGGIIRDSQGLFVLGFQKRIGFATSTAVE 1775
Query: 695 LWAIKDGLSLAWDMGFKSIIVESDVGTILD 784
LWAI++ LSLA + +I++E+D +D
Sbjct: 1776 LWAIREELSLAKERNLNNIMLETDSQLAID 1805
Score = 34.7 bits (78), Expect(3) = 1e-16
Identities = 19/51 (37%), Positives = 28/51 (54%)
Frame = +1
Query: 808 LLPLLLDCRNLFDRPWVVDLRSIYREGNCMADVIAKNACNQPDVFCCFSVP 960
L+ LL DCR+L + + L+ +REGN AD +AK + + F F P
Sbjct: 1817 LIVLLDDCRSLMAQLRIQTLQHTFREGNYCADKLAKASTLMDEDFIVFEQP 1867
Score = 32.3 bits (72), Expect(3) = 1e-16
Identities = 27/108 (25%), Positives = 44/108 (40%), Gaps = 5/108 (4%)
Frame = +3
Query: 189 SNSNALRDCFFARKFWQRLHYYSAAEDFFRWAISNWLEKNLSLSSLEAFPHISWQLICTL 368
S + LR C A W+ L F + +WLE N+ + F I W ++ +
Sbjct: 1609 SVKHVLRGCKQAISIWRALKPPENIHQSFTSGLRDWLEFNMKHTDPAHFT-IPWNILFSF 1667
Query: 369 GAWTLWLNRISQVFDPKPV-----TISSLFGQHINNALTSDS*GLEKL 497
W +W I+ F K + + S+F Q +SD+ +KL
Sbjct: 1668 AIWEIW-KHINDNFFGKTLRSNNRILQSIFQQAAEFFASSDNANNKKL 1714
>OMO85295.1 reverse transcriptase [Corchorus capsularis]
Length = 1267
Score = 77.8 bits (190), Expect(2) = 4e-16
Identities = 40/85 (47%), Positives = 51/85 (60%)
Frame = +2
Query: 527 IRWFPPPTHTIKINTDSSVLPSSNFAGAAAVLRDSQGVWIAGTSRKLMGVSVPITELWAI 706
+ W PP K+N D S L + AGA ++LRD G WIAGTSR + S + ELWA+
Sbjct: 1149 VSWKPPDQGWFKVNCDGSSLGNPGKAGAGSLLRDEMGNWIAGTSRHIGRASNFLAELWAL 1208
Query: 707 KDGLSLAWDMGFKSIIVESDVGTIL 781
KDGL+LA + K IIVE D I+
Sbjct: 1209 KDGLALAKSLNVKKIIVELDATAII 1233
Score = 37.0 bits (84), Expect(2) = 4e-16
Identities = 21/68 (30%), Positives = 28/68 (41%)
Frame = +3
Query: 207 RDCFFARKFWQRLHYYSAAEDFFRWAISNWLEKNLSLSSLEAFPHISWQLICTLGAWTLW 386
RDC + FWQ+ + F WL+ NL P I + L+ T W +W
Sbjct: 1049 RDCIVTQTFWQQAGFIFQPTSPF----DLWLKDNLLRKDYHQNPSIPFSLLFTHLLWEIW 1104
Query: 387 LNRISQVF 410
L R VF
Sbjct: 1105 LERNQVVF 1112
>AID60103.1 hypothetical protein [Brassica napus]
Length = 620
Score = 68.9 bits (167), Expect(3) = 5e-16
Identities = 32/85 (37%), Positives = 46/85 (54%)
Frame = +2
Query: 527 IRWFPPPTHTIKINTDSSVLPSSNFAGAAAVLRDSQGVWIAGTSRKLMGVSVPITELWAI 706
I WF P +K+NTD + + A A LRD +G WI G S + S P+ ELW +
Sbjct: 450 IAWFVPENGWVKLNTDGASRGNPGLATAGGALRDEEGKWIGGFSLNIGICSAPLAELWGV 509
Query: 707 KDGLSLAWDMGFKSIIVESDVGTIL 781
GL +AWD G + + VE D +++
Sbjct: 510 YYGLCIAWDKGIRKLEVEVDSKSVV 534
Score = 35.0 bits (79), Expect(3) = 5e-16
Identities = 20/71 (28%), Positives = 32/71 (45%)
Frame = +3
Query: 198 NALRDCFFARKFWQRLHYYSAAEDFFRWAISNWLEKNLSLSSLEAFPHISWQLICTLGAW 377
+ LRDC A W++L + + FF + WL +N L++ ++ W + L W
Sbjct: 341 HVLRDCPAAAGLWRKLVLPTRQQRFFNLTLFEWLYEN--LANDKSVNGDQWPSLFALTVW 398
Query: 378 TLWLNRISQVF 410
W R VF
Sbjct: 399 WCWKWRCGYVF 409
Score = 30.0 bits (66), Expect(3) = 5e-16
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +1
Query: 787 TIIVHNHLLPLLLD-CRNLFDRPWVVDLRSIYREGNCMADVIAKNA 921
T I +H L L+ C R W+V+ +YRE N +AD +A A
Sbjct: 539 TGIHDSHPLSFLVRLCYGFVSRDWIVNFSHVYRETNRLADGLANYA 584
>OMO86377.1 reverse transcriptase [Corchorus capsularis]
Length = 3633
Score = 60.1 bits (144), Expect(3) = 6e-16
Identities = 26/85 (30%), Positives = 44/85 (51%)
Frame = +2
Query: 527 IRWFPPPTHTIKINTDSSVLPSSNFAGAAAVLRDSQGVWIAGTSRKLMGVSVPITELWAI 706
+ W PP K+N+D S L + +G+ +R+ G W+ G +R ++ + ELW +
Sbjct: 3489 VHWIPPSYGWFKLNSDGSTLDNPGLSGSGGCIRNEFGEWMYGYARNIVHATSVHAELWGL 3548
Query: 707 KDGLSLAWDMGFKSIIVESDVGTIL 781
+DGL LA D G + V D ++
Sbjct: 3549 RDGLKLALDKGISLLEVSIDAKVVI 3573
Score = 38.9 bits (89), Expect(3) = 6e-16
Identities = 23/99 (23%), Positives = 46/99 (46%), Gaps = 5/99 (5%)
Frame = +3
Query: 162 NSEDSIRSISNSNALRDCFFARKFWQRL-----HYYSAAEDFFRWAISNWLEKNLSLSSL 326
++E+S+ I LRDC A W ++ H++ ++ F W ++LS
Sbjct: 3376 DTEESVLHI-----LRDCTIAHSLWDKISHLPQHFFDC-DNVFDWF-------RINLSDP 3422
Query: 327 EAFPHISWQLICTLGAWTLWLNRISQVFDPKPVTISSLF 443
++ W + W+LW +R +++F K + +S+F
Sbjct: 3423 NVVNNLPWPCLFAYCCWSLWYSRNARLFQGKALDFNSVF 3461
Score = 34.7 bits (78), Expect(3) = 6e-16
Identities = 18/45 (40%), Positives = 24/45 (53%)
Frame = +1
Query: 817 LLLDCRNLFDRPWVVDLRSIYREGNCMADVIAKNACNQPDVFCCF 951
L++DCR L + + L YREGN +AD +A N D F F
Sbjct: 3589 LIIDCRTLMSQFHRLKLSHCYREGNRLADALANLGRNSGDNFIDF 3633
>AAC63844.1 putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1231
Score = 61.2 bits (147), Expect(3) = 6e-16
Identities = 27/80 (33%), Positives = 42/80 (52%)
Frame = +2
Query: 527 IRWFPPPTHTIKINTDSSVLPSSNFAGAAAVLRDSQGVWIAGTSRKLMGVSVPITELWAI 706
IRW P +KI TD + + A A +R+ QG W+ G + + + P+ ELW
Sbjct: 1061 IRWQVPSDGWVKITTDGASRGNHGLAAAGGAIRNGQGEWLGGFALNIGSCAAPLAELWGA 1120
Query: 707 KDGLSLAWDMGFKSIIVESD 766
GL +AWD GF+ + ++ D
Sbjct: 1121 YYGLLIAWDKGFRRVELDLD 1140
Score = 37.0 bits (84), Expect(3) = 6e-16
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +1
Query: 784 STIIVHNHLLPLLLD-CRNLFDRPWVVDLRSIYREGNCMADVIAKNACNQPDVFCCF 951
ST + + H L L+ C+ F R W+V + +YRE N +AD +A A P CF
Sbjct: 1149 STGVSNAHPLSFLVRLCQGFFTRDWLVRVSHVYREANRLADGLANYAFTLPLGLHCF 1205
Score = 35.4 bits (80), Expect(3) = 6e-16
Identities = 24/94 (25%), Positives = 39/94 (41%), Gaps = 7/94 (7%)
Frame = +3
Query: 165 SEDSIRSISNS------NALRDCFFARKFWQRLHYYSAAEDFFRWAISNWLEKNLS-LSS 323
SE++I S+ N + LRDC W+RL +FF ++ WL N+ +
Sbjct: 939 SENAICSVCNGAEETILHVLRDCPAMEPIWRRLLPLRRHHEFFSQSLLEWLFTNMDPVKG 998
Query: 324 LEAFPHISWQLICTLGAWTLWLNRISQVFDPKPV 425
+ W + +G W W R VF + +
Sbjct: 999 I-------WPTLFGMGIWWAWKWRCCDVFGERKI 1025
>XP_012461277.1 PREDICTED: uncharacterized protein LOC105781288 [Gossypium
raimondii]
Length = 246
Score = 87.0 bits (214), Expect = 1e-15
Identities = 43/86 (50%), Positives = 56/86 (65%)
Frame = +2
Query: 527 IRWFPPPTHTIKINTDSSVLPSSNFAGAAAVLRDSQGVWIAGTSRKLMGVSVPITELWAI 706
+ W PP +KINTD + + SS A A V+RD +G WI+G SR L +V +ELWAI
Sbjct: 131 VTWSRPPHGVLKINTDGAPIKSSAMASAGEVVRDDKGDWISGFSRSLGVATVLHSELWAI 190
Query: 707 KDGLSLAWDMGFKSIIVESDVGTILD 784
DGL+LAWD GF+ II+ESD +D
Sbjct: 191 LDGLNLAWDRGFRKIILESDSKEAID 216
>XP_015936169.1 PREDICTED: uncharacterized protein LOC107462117 [Arachis duranensis]
Length = 1250
Score = 64.7 bits (156), Expect(3) = 1e-15
Identities = 37/117 (31%), Positives = 56/117 (47%)
Frame = +2
Query: 434 LPFRTTHQQCVNIRFLGP*EIKNSIPCYIDFIRWFPPPTHTIKINTDSSVLPSSNFAGAA 613
LPF + + F + KN I I W PP +K+NTD + + AG
Sbjct: 1051 LPFILKQVKLIQEAFKKEGQRKNKIETNIC---WECPPEDWMKVNTDGAAKGNPGMAGCG 1107
Query: 614 AVLRDSQGVWIAGTSRKLMGVSVPITELWAIKDGLSLAWDMGFKSIIVESDVGTILD 784
++R+ QG WIAG + + ELW + GL AW++G + II+E D ++D
Sbjct: 1108 GLIRNYQGRWIAGFVANIGYCTAYYAELWGVYYGLKTAWELGMRKIILEVDSKAVVD 1164
Score = 44.3 bits (103), Expect(3) = 1e-15
Identities = 22/71 (30%), Positives = 35/71 (49%)
Frame = +3
Query: 204 LRDCFFARKFWQRLHYYSAAEDFFRWAISNWLEKNLSLSSLEAFPHISWQLICTLGAWTL 383
LRDC A + W +L ++ DFFR + W+ NL++ L +W + W L
Sbjct: 973 LRDCPVASRVWVKLIHHEHIHDFFRAPFNAWIRWNLAM-DLGTTKQGNWNTQFLVTCWWL 1031
Query: 384 WLNRISQVFDP 416
W R ++F+P
Sbjct: 1032 WKWRNQEIFNP 1042
Score = 23.9 bits (50), Expect(3) = 1e-15
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +1
Query: 838 LFDRPWVVDLRSIYREGNCMADVIAKNA 921
+ R W L YREGN AD +A +
Sbjct: 1186 ILQRKWQTKLVHSYREGNRGADCMANES 1213
>GAU51253.1 hypothetical protein TSUD_412460, partial [Trifolium subterraneum]
Length = 609
Score = 60.5 bits (145), Expect(3) = 2e-15
Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Frame = +2
Query: 509 PCYIDF--IRWFPPPTHTIKINTDSSVLPSSNFAGAAAVLRDSQGVWIAGTSRKLMGVSV 682
PC + I+W P + +NTD + + AG +LR+ G+WI G S+ L S
Sbjct: 441 PCQKELKDIKWIYPAKGWVCLNTDGAAKSDTGIAGCGGILRNDNGIWICGFSKFLGNTSA 500
Query: 683 PITELWAIKDGLSLAWDMGFKSIIVESD 766
+ E+W + +GLS+A ++G + + V+ D
Sbjct: 501 YMAEVWGLYEGLSMARNLGIERLEVQVD 528
Score = 35.8 bits (81), Expect(3) = 2e-15
Identities = 21/73 (28%), Positives = 33/73 (45%)
Frame = +3
Query: 198 NALRDCFFARKFWQRLHYYSAAEDFFRWAISNWLEKNLSLSSLEAFPHISWQLICTLGAW 377
+ LRDC A + WQ L FF + W++ NLS +S+ + W + +
Sbjct: 339 HVLRDCPLAVEVWQHLLEEEHRGRFFIGQLHQWIDLNLS-TSIGIRRDLDWDAVWVTTCF 397
Query: 378 TLWLNRISQVFDP 416
LW R +V +P
Sbjct: 398 WLWKWRNKRVHEP 410
Score = 35.4 bits (80), Expect(3) = 2e-15
Identities = 17/37 (45%), Positives = 22/37 (59%)
Frame = +1
Query: 832 RNLFDRPWVVDLRSIYREGNCMADVIAKNACNQPDVF 942
R L D W V ++ I+ EGN ADV+A CNQ V+
Sbjct: 554 RALLDLNWEVRIKHIFCEGNRCADVLANMGCNQDAVW 590