BLASTX nr result
ID: Panax25_contig00031846
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax25_contig00031846
(982 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ERN02875.1 hypothetical protein AMTR_s00334p00015220 [Amborella ... 131 3e-35
OIW17041.1 hypothetical protein TanjilG_00183 [Lupinus angustifo... 125 6e-33
XP_003620942.1 photosystem I assembly protein ycf3 [Medicago tru... 125 6e-33
XP_003599571.2 photosystem I assembly protein ycf3 [Medicago tru... 122 1e-31
pir||A05190 hypothetical protein 77 - common tobacco chloroplast... 121 3e-31
YP_006503792.1 photosystem I assembly protein Ycf3 (chloroplast)... 106 3e-24
YP_086967.1 photosystem I assembly protein Ycf3 [Panax ginseng] ... 105 6e-24
ADK89694.1 hypothetical chloroplast RF34 (chloroplast) [Hydrocot... 105 6e-24
YP_009241053.1 photosystem I assembly protein Ycf3 (chloroplast)... 105 6e-24
AIP85231.1 Ycf3 (chloroplast) [Camellia sinensis] 103 7e-24
YP_009162878.1 photosystem I assembly protein ycf3 (chloroplast)... 103 8e-24
YP_009170428.1 hypothetical chloroplast RF34 (chloroplast) [Humu... 104 2e-23
YP_009336379.1 hypothetical chloroplast RF34 (chloroplast) [Nico... 100 2e-23
YP_009326114.1 photosystem I assembly protein ycf3 (chloroplast)... 102 2e-23
YP_001837361.1 photosystem I assembly protein Ycf3 [Guizotia aby... 103 2e-23
YP_009342763.1 photosystem I assembly protein ycf3 (chloroplast)... 103 2e-23
YP_009245011.1 photosystem I assembly protein Ycf3 (chloroplast)... 103 2e-23
YP_009240795.1 photosystem I assembly protein Ycf3 (chloroplast)... 103 2e-23
YP_009235541.1 Ycf3 (chloroplast) [Cynanchum wilfordii] YP_00923... 103 2e-23
YP_009164578.1 photosystem I assembly protein Ycf3 (chloroplast)... 103 2e-23
>ERN02875.1 hypothetical protein AMTR_s00334p00015220 [Amborella trichopoda]
Length = 70
Score = 131 bits (330), Expect = 3e-35
Identities = 64/70 (91%), Positives = 65/70 (92%)
Frame = +2
Query: 728 MR*ETLKYGSKGRN*LAYSDRGEQAIRQGDSEIAEAWFDQAAEYWKQAMALTPGNSIEAH 907
MR ETLKYGSKGRN AYSDRGEQAIRQGDSEIAEAWFDQAAEYWKQA+ALTPGN IEA
Sbjct: 1 MRSETLKYGSKGRNLSAYSDRGEQAIRQGDSEIAEAWFDQAAEYWKQALALTPGNYIEAQ 60
Query: 908 NWLKITRRFE 937
NWLKITRRFE
Sbjct: 61 NWLKITRRFE 70
>OIW17041.1 hypothetical protein TanjilG_00183 [Lupinus angustifolius]
Length = 70
Score = 125 bits (315), Expect = 6e-33
Identities = 62/70 (88%), Positives = 63/70 (90%)
Frame = +2
Query: 728 MR*ETLKYGSKGRN*LAYSDRGEQAIRQGDSEIAEAWFDQAAEYWKQAMALTPGNSIEAH 907
MR ETLKYGSKGRN L YSDRGEQAIRQG SEIAEAWFDQAAEYWKQA+ALTPGN IEA
Sbjct: 1 MRQETLKYGSKGRNLLTYSDRGEQAIRQGYSEIAEAWFDQAAEYWKQAIALTPGNYIEAQ 60
Query: 908 NWLKITRRFE 937
NWLKIT RFE
Sbjct: 61 NWLKITGRFE 70
>XP_003620942.1 photosystem I assembly protein ycf3 [Medicago truncatula]
AES77160.1 photosystem I assembly protein ycf3 [Medicago
truncatula]
Length = 70
Score = 125 bits (315), Expect = 6e-33
Identities = 60/67 (89%), Positives = 62/67 (92%)
Frame = +2
Query: 737 ETLKYGSKGRN*LAYSDRGEQAIRQGDSEIAEAWFDQAAEYWKQAMALTPGNSIEAHNWL 916
ETLKYGSKGRN L YSDRGEQAIRQGDSEIAE+WFDQAAEYWKQA+ALTPGN IEA NWL
Sbjct: 4 ETLKYGSKGRNLLTYSDRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQNWL 63
Query: 917 KITRRFE 937
KIT RFE
Sbjct: 64 KITGRFE 70
>XP_003599571.2 photosystem I assembly protein ycf3 [Medicago truncatula]
AES69822.2 photosystem I assembly protein ycf3 [Medicago
truncatula]
Length = 70
Score = 122 bits (306), Expect = 1e-31
Identities = 59/67 (88%), Positives = 61/67 (91%)
Frame = +2
Query: 737 ETLKYGSKGRN*LAYSDRGEQAIRQGDSEIAEAWFDQAAEYWKQAMALTPGNSIEAHNWL 916
ETLKYGSKGRN L SDRGEQAIRQGDSEIAE+WFDQAAEYWKQA+ALTPGN IEA NWL
Sbjct: 4 ETLKYGSKGRNLLTNSDRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQNWL 63
Query: 917 KITRRFE 937
KIT RFE
Sbjct: 64 KITGRFE 70
>pir||A05190 hypothetical protein 77 - common tobacco chloroplast prf||1211235AD
ORF 77
Length = 77
Score = 121 bits (304), Expect = 3e-31
Identities = 64/77 (83%), Positives = 67/77 (87%)
Frame = -1
Query: 907 MRFNRITRSKRHSLFPILSGLIEPSLRYFRISLSNGLFSPVGIGESIPSLRTVLESFLPH 728
MRFN IT SKR+SLFPILSGLIEPSL FRISL NGLFSP GIG SIPSLRTVLE+FLPH
Sbjct: 1 MRFNIITGSKRYSLFPILSGLIEPSLCNFRISLLNGLFSPAGIGSSIPSLRTVLENFLPH 60
Query: 727 TAQQSILLVSPILIYHI 677
TAQQSILLVS +YHI
Sbjct: 61 TAQQSILLVSHFDLYHI 77
>YP_006503792.1 photosystem I assembly protein Ycf3 (chloroplast) [Datura
stramonium] AEQ36939.1 photosystem I assembly protein
Ycf3 (chloroplast) [Datura stramonium] AEQ37090.1
photosystem I assembly protein Ycf3 (chloroplast)
[Datura stramonium]
Length = 170
Score = 106 bits (264), Expect = 3e-24
Identities = 49/53 (92%), Positives = 51/53 (96%)
Frame = +2
Query: 779 YSDRGEQAIRQGDSEIAEAWFDQAAEYWKQAMALTPGNSIEAHNWLKITRRFE 937
YS RGEQAI+QGDSEIAEAWFDQAAEYWKQA+ALTPGN IEAHNWLKITRRFE
Sbjct: 118 YSGRGEQAIQQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 170
>YP_086967.1 photosystem I assembly protein Ycf3 [Panax ginseng] YP_004935553.1
photosystem I assembly protein Ycf3 (chloroplast)
[Eleutherococcus senticosus] YP_008814944.1 hypothetical
chloroplast RF34 (chloroplast) [Brassaiopsis hainla]
YP_008815031.1 hypothetical chloroplast RF34
(chloroplast) [Metapanax delavayi] YP_008815118.1
hypothetical chloroplast RF34 (chloroplast) [Schefflera
delavayi] YP_008815205.1 hypothetical chloroplast RF34
(chloroplast) [Kalopanax septemlobus] YP_009121174.1
hypothetical chloroplast RF34 (chloroplast) [Panax
notoginseng] YP_009122726.1 photosystem I assembly
protein Ycf3 (chloroplast) [Dendropanax dentiger]
YP_009155429.1 Ycf3 (chloroplast) [Panax quinquefolius]
YP_009159539.1 Ycf3 (chloroplast) [Dendropanax morbifer]
YP_009191854.1 photosystem I assembly protein ycf3
(chloroplast) [Panax japonicus] YP_009191941.1
photosystem I assembly protein ycf3 (chloroplast) [Panax
vietnamensis] YP_009266519.1 Ycf3 (chloroplast) [Panax
stipuleanatus] Q68S05.1 RecName: Full=Photosystem I
assembly protein Ycf3 AAT98510.1 ycf3 protein
(chloroplast) [Panax ginseng] AEO92620.1 photosystem I
assembly protein Ycf3 (chloroplast) [Eleutherococcus
senticosus] AGG39044.1 hypothetical chloroplast RF34
(chloroplast) [Brassaiopsis hainla] AGG39131.1
hypothetical chloroplast RF34 (chloroplast) [Metapanax
delavayi] AGG39218.1 hypothetical chloroplast RF34
(chloroplast) [Schefflera delavayi] AGG39305.1
hypothetical chloroplast RF34 (chloroplast) [Kalopanax
septemlobus] AGM15036.1 photosystem I assembly protein
Ycf3 (chloroplast) [Panax ginseng] AGM15122.1
photosystem I assembly protein Ycf3 (chloroplast) [Panax
ginseng] AGM15208.1 photosystem I assembly protein Ycf3
(chloroplast) [Panax ginseng] AGW31968.1 photosystem I
assembly protein Ycf3 (chloroplast) [Panax ginseng]
AIA24328.1 hypothetical chloroplast RF34 (chloroplast)
[Panax notoginseng] AIX97890.1 Ycf3 (chloroplast) [Panax
ginseng] AIX97977.1 Ycf3 (chloroplast) [Panax ginseng]
AIX98060.1 Ycf3 (chloroplast) [Panax ginseng] AIX98145.1
Ycf3 (chloroplast) [Panax ginseng] AIX98230.1 Ycf3
(chloroplast) [Panax ginseng] AIX98315.1 Ycf3
(chloroplast) [Panax ginseng] AIX98400.1 Ycf3
(chloroplast) [Panax ginseng] AIX98485.1 Ycf3
(chloroplast) [Panax ginseng] AIX98570.1 Ycf3
(chloroplast) [Panax ginseng] AJC99489.1 Ycf3
(chloroplast) [Panax quinquefolius] AJC99574.1 Ycf3
(chloroplast) [Panax ginseng] AJC99659.1 Ycf3
(chloroplast) [Panax ginseng] AJK29855.1 photosystem I
assembly protein Ycf3 (chloroplast) [Dendropanax
dentiger] AKB99073.1 photosystem I assembly protein ycf3
(chloroplast) [Panax notoginseng] AKB99160.1 photosystem
I assembly protein ycf3 (chloroplast) [Panax japonicus]
AKB99247.1 photosystem I assembly protein ycf3
(chloroplast) [Panax vietnamensis] AKB99334.1
photosystem I assembly protein ycf3 (chloroplast) [Panax
vietnamensis] AKG26601.1 photosystem I assembly protein
Ycf3 (chloroplast) [Panax notoginseng] AKQ20729.1 Ycf3
(chloroplast) [Dendropanax morbifer] AKU70776.1
hypothetical chloroplast RF34 (chloroplast) [Panax
notoginseng] AKZ29747.1 hypothetical chloroplast RF34
(chloroplast) [Panax quinquefolius] AMR97450.1 Ycf3
(chloroplast) [Panax vietnamensis] ANK78331.1 Ycf3
(chloroplast) [Panax japonicus var. bipinnatifidus]
ANK78417.1 Ycf3 (chloroplast) [Panax stipuleanatus]
ANS71770.1 Ycf3 (chloroplast) [Eleutherococcus
sessiliflorus] ANS71857.1 Ycf3 (chloroplast)
[Eleutherococcus gracilistylus]
Length = 168
Score = 105 bits (262), Expect = 6e-24
Identities = 49/50 (98%), Positives = 49/50 (98%)
Frame = +2
Query: 788 RGEQAIRQGDSEIAEAWFDQAAEYWKQAMALTPGNSIEAHNWLKITRRFE 937
RGEQAIRQGDSEIAEAWFDQAAEYWKQAMALTPGN IEAHNWLKITRRFE
Sbjct: 119 RGEQAIRQGDSEIAEAWFDQAAEYWKQAMALTPGNYIEAHNWLKITRRFE 168
>ADK89694.1 hypothetical chloroplast RF34 (chloroplast) [Hydrocotyle
verticillata]
Length = 168
Score = 105 bits (262), Expect = 6e-24
Identities = 49/50 (98%), Positives = 49/50 (98%)
Frame = +2
Query: 788 RGEQAIRQGDSEIAEAWFDQAAEYWKQAMALTPGNSIEAHNWLKITRRFE 937
RGEQAIRQGDSEIAEAWFDQAAEYWKQAMALTPGN IEAHNWLKITRRFE
Sbjct: 119 RGEQAIRQGDSEIAEAWFDQAAEYWKQAMALTPGNYIEAHNWLKITRRFE 168
>YP_009241053.1 photosystem I assembly protein Ycf3 (chloroplast) [Schefflera
heptaphylla] AMK46185.1 photosystem I assembly protein
Ycf3 (chloroplast) [Schefflera heptaphylla]
Length = 169
Score = 105 bits (262), Expect = 6e-24
Identities = 49/50 (98%), Positives = 49/50 (98%)
Frame = +2
Query: 788 RGEQAIRQGDSEIAEAWFDQAAEYWKQAMALTPGNSIEAHNWLKITRRFE 937
RGEQAIRQGDSEIAEAWFDQAAEYWKQAMALTPGN IEAHNWLKITRRFE
Sbjct: 120 RGEQAIRQGDSEIAEAWFDQAAEYWKQAMALTPGNYIEAHNWLKITRRFE 169
>AIP85231.1 Ycf3 (chloroplast) [Camellia sinensis]
Length = 126
Score = 103 bits (258), Expect = 7e-24
Identities = 48/50 (96%), Positives = 49/50 (98%)
Frame = +2
Query: 788 RGEQAIRQGDSEIAEAWFDQAAEYWKQAMALTPGNSIEAHNWLKITRRFE 937
RGEQAIRQGDSEIAEAWFDQAAEYWKQA+ALTPGN IEAHNWLKITRRFE
Sbjct: 77 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 126
>YP_009162878.1 photosystem I assembly protein ycf3 (chloroplast) [Rheum palmatum]
ABY79733.1 photosystem I assembly protein ycf3
(chloroplast) [Fagopyrum esculentum subsp. ancestrale]
AKT93624.1 photosystem I assembly protein ycf3
(chloroplast) [Rheum palmatum]
Length = 130
Score = 103 bits (258), Expect = 8e-24
Identities = 48/50 (96%), Positives = 49/50 (98%)
Frame = +2
Query: 788 RGEQAIRQGDSEIAEAWFDQAAEYWKQAMALTPGNSIEAHNWLKITRRFE 937
RGEQAIRQGDSEIAEAWFDQAAEYWKQA+ALTPGN IEAHNWLKITRRFE
Sbjct: 81 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 130
>YP_009170428.1 hypothetical chloroplast RF34 (chloroplast) [Humulus lupulus]
ALE29425.1 hypothetical chloroplast RF34 (chloroplast)
[Humulus lupulus]
Length = 169
Score = 104 bits (259), Expect = 2e-23
Identities = 48/55 (87%), Positives = 51/55 (92%)
Frame = +2
Query: 773 LAYSDRGEQAIRQGDSEIAEAWFDQAAEYWKQAMALTPGNSIEAHNWLKITRRFE 937
+ + DRGEQAIRQGDSEIAEAWFDQAAEYWKQA+ALTPGN IEA NWLKITRRFE
Sbjct: 115 ICHYDRGEQAIRQGDSEIAEAWFDQAAEYWKQALALTPGNYIEAQNWLKITRRFE 169
>YP_009336379.1 hypothetical chloroplast RF34 (chloroplast) [Nicotiana otophora]
ALT14474.1 hypothetical chloroplast RF34 (chloroplast)
[Nicotiana otophora]
Length = 50
Score = 100 bits (249), Expect = 2e-23
Identities = 46/49 (93%), Positives = 48/49 (97%)
Frame = +2
Query: 791 GEQAIRQGDSEIAEAWFDQAAEYWKQAMALTPGNSIEAHNWLKITRRFE 937
GEQAI+QGDSEIAEAWFDQAAEYWKQA+ALTPGN IEAHNWLKITRRFE
Sbjct: 2 GEQAIQQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 50
>YP_009326114.1 photosystem I assembly protein ycf3 (chloroplast) [Oxyria sinensis]
APD26343.1 photosystem I assembly protein ycf3
(chloroplast) [Oxyria sinensis]
Length = 130
Score = 102 bits (255), Expect = 2e-23
Identities = 47/50 (94%), Positives = 49/50 (98%)
Frame = +2
Query: 788 RGEQAIRQGDSEIAEAWFDQAAEYWKQAMALTPGNSIEAHNWLKITRRFE 937
RGEQAIRQGDSEIAEAWFDQAAEYWKQA++LTPGN IEAHNWLKITRRFE
Sbjct: 81 RGEQAIRQGDSEIAEAWFDQAAEYWKQAISLTPGNYIEAHNWLKITRRFE 130
>YP_001837361.1 photosystem I assembly protein Ycf3 [Guizotia abyssinica]
ACB86528.1 hypothetical chloroplast RF34 (chloroplast)
[Guizotia abyssinica]
Length = 168
Score = 103 bits (258), Expect = 2e-23
Identities = 48/50 (96%), Positives = 49/50 (98%)
Frame = +2
Query: 788 RGEQAIRQGDSEIAEAWFDQAAEYWKQAMALTPGNSIEAHNWLKITRRFE 937
RGEQAIRQGDSEIAEAWFDQAAEYWKQA+ALTPGN IEAHNWLKITRRFE
Sbjct: 119 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 168
>YP_009342763.1 photosystem I assembly protein ycf3 (chloroplast) [Pouteria
campechiana] APS85507.1 photosystem I assembly protein
ycf3 (chloroplast) [Pouteria campechiana]
Length = 168
Score = 103 bits (258), Expect = 2e-23
Identities = 48/50 (96%), Positives = 49/50 (98%)
Frame = +2
Query: 788 RGEQAIRQGDSEIAEAWFDQAAEYWKQAMALTPGNSIEAHNWLKITRRFE 937
RGEQAIRQGDSEIAEAWFDQAAEYWKQA+ALTPGN IEAHNWLKITRRFE
Sbjct: 119 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 168
>YP_009245011.1 photosystem I assembly protein Ycf3 (chloroplast) [Kolkwitzia
amabilis] AMR73752.1 photosystem I assembly protein Ycf3
(chloroplast) [Kolkwitzia amabilis]
Length = 168
Score = 103 bits (258), Expect = 2e-23
Identities = 48/50 (96%), Positives = 49/50 (98%)
Frame = +2
Query: 788 RGEQAIRQGDSEIAEAWFDQAAEYWKQAMALTPGNSIEAHNWLKITRRFE 937
RGEQAIRQGDSEIAEAWFDQAAEYWKQA+ALTPGN IEAHNWLKITRRFE
Sbjct: 119 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 168
>YP_009240795.1 photosystem I assembly protein Ycf3 (chloroplast) [Diplopanax
stachyanthus] AJO25214.1 photosystem I assembly protein
Ycf3 (chloroplast) [Diplopanax stachyanthus]
Length = 168
Score = 103 bits (258), Expect = 2e-23
Identities = 48/50 (96%), Positives = 49/50 (98%)
Frame = +2
Query: 788 RGEQAIRQGDSEIAEAWFDQAAEYWKQAMALTPGNSIEAHNWLKITRRFE 937
RGEQAIRQGDSEIAEAWFDQAAEYWKQA+ALTPGN IEAHNWLKITRRFE
Sbjct: 119 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 168
>YP_009235541.1 Ycf3 (chloroplast) [Cynanchum wilfordii] YP_009235628.1 Ycf3
(chloroplast) [Cynanchum auriculatum] AMD38382.1 Ycf3
(chloroplast) [Cynanchum wilfordii] AMD38469.1 Ycf3
(chloroplast) [Cynanchum auriculatum] ANF05130.1
photosystem I assembly protein Ycf3 (chloroplast)
[Cynanchum auriculatum]
Length = 168
Score = 103 bits (258), Expect = 2e-23
Identities = 48/50 (96%), Positives = 49/50 (98%)
Frame = +2
Query: 788 RGEQAIRQGDSEIAEAWFDQAAEYWKQAMALTPGNSIEAHNWLKITRRFE 937
RGEQAIRQGDSEIAEAWFDQAAEYWKQA+ALTPGN IEAHNWLKITRRFE
Sbjct: 119 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 168
>YP_009164578.1 photosystem I assembly protein Ycf3 (chloroplast) [Lathraea
squamaria] AJD76809.1 photosystem I assembly protein
Ycf3 (chloroplast) [Lathraea squamaria]
Length = 168
Score = 103 bits (258), Expect = 2e-23
Identities = 48/50 (96%), Positives = 49/50 (98%)
Frame = +2
Query: 788 RGEQAIRQGDSEIAEAWFDQAAEYWKQAMALTPGNSIEAHNWLKITRRFE 937
RGEQAIRQGDSEIAEAWFDQAAEYWKQA+ALTPGN IEAHNWLKITRRFE
Sbjct: 119 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 168