BLASTX nr result

ID: Panax25_contig00031818 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00031818
         (665 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017253705.1 PREDICTED: probable E3 ubiquitin-protein ligase L...    60   3e-07
XP_018818099.1 PREDICTED: probable E3 ubiquitin-protein ligase L...    60   3e-07
OAY41038.1 hypothetical protein MANES_09G069000 [Manihot esculenta]    58   2e-06
OAY42666.1 hypothetical protein MANES_08G006400 [Manihot esculenta]    57   3e-06
CDP06735.1 unnamed protein product [Coffea canephora]                  57   3e-06
OMO72515.1 Zinc finger, RING-type [Corchorus capsularis]               57   5e-06
XP_008442675.1 PREDICTED: probable E3 ubiquitin-protein ligase L...    57   5e-06
OMO73522.1 Zinc finger, RING-type [Corchorus olitorius]                57   5e-06
ACA35274.1 zinc finger RING-type protein [Cucumis sativus]             56   6e-06

>XP_017253705.1 PREDICTED: probable E3 ubiquitin-protein ligase LOG2 [Daucus carota
           subsp. sativus] KZM94466.1 hypothetical protein
           DCAR_017709 [Daucus carota subsp. sativus]
          Length = 377

 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 30/45 (66%), Positives = 33/45 (73%)
 Frame = -3

Query: 291 MGNVGSSSVNGRRRQGSRRNHXXXXXXXXXXPEITANRYVFAAAT 157
           MGNVGS+S+NGRRRQGSRR+H           EIT NRYVFAAAT
Sbjct: 1   MGNVGSNSMNGRRRQGSRRSHPPPPPPQQPQQEITPNRYVFAAAT 45


>XP_018818099.1 PREDICTED: probable E3 ubiquitin-protein ligase LOG2 [Juglans
           regia]
          Length = 408

 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 31/47 (65%), Positives = 33/47 (70%)
 Frame = -3

Query: 297 NPMGNVGSSSVNGRRRQGSRRNHXXXXXXXXXXPEITANRYVFAAAT 157
           N MGN+GSS VNGRRR GSRR H          PEI+ANRYVFAAAT
Sbjct: 33  NSMGNIGSSGVNGRRRPGSRRTHPPPPPQAPPQPEISANRYVFAAAT 79


>OAY41038.1 hypothetical protein MANES_09G069000 [Manihot esculenta]
          Length = 357

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 30/45 (66%), Positives = 32/45 (71%)
 Frame = -3

Query: 291 MGNVGSSSVNGRRRQGSRRNHXXXXXXXXXXPEITANRYVFAAAT 157
           MGN+GSS V+GRRR GSRR H          PEITANRYVFAAAT
Sbjct: 1   MGNIGSSGVHGRRRYGSRRRHPTPPPPAPPQPEITANRYVFAAAT 45


>OAY42666.1 hypothetical protein MANES_08G006400 [Manihot esculenta]
          Length = 357

 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 29/45 (64%), Positives = 32/45 (71%)
 Frame = -3

Query: 291 MGNVGSSSVNGRRRQGSRRNHXXXXXXXXXXPEITANRYVFAAAT 157
           MGN+GSS V+GRRR GSRR+H          PEIT NRYVFAAAT
Sbjct: 1   MGNIGSSGVHGRRRHGSRRSHPPTPPPAAPQPEITGNRYVFAAAT 45


>CDP06735.1 unnamed protein product [Coffea canephora]
          Length = 363

 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 29/45 (64%), Positives = 32/45 (71%)
 Frame = -3

Query: 291 MGNVGSSSVNGRRRQGSRRNHXXXXXXXXXXPEITANRYVFAAAT 157
           MGN+GS+ VN RRR GSRR+H          PEITANRYVFAAAT
Sbjct: 1   MGNIGSTGVNNRRRSGSRRSHPPPPPPQPPQPEITANRYVFAAAT 45


>OMO72515.1 Zinc finger, RING-type [Corchorus capsularis]
          Length = 361

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 32/48 (66%), Positives = 33/48 (68%), Gaps = 3/48 (6%)
 Frame = -3

Query: 291 MGNVGSSSVNGRRRQGSRRNH---XXXXXXXXXXPEITANRYVFAAAT 157
           MGN+GSS VNGRRRQGSRRNH             PEI ANRYVFAAAT
Sbjct: 1   MGNIGSSGVNGRRRQGSRRNHPPPPPPPPPAQPQPEIPANRYVFAAAT 48


>XP_008442675.1 PREDICTED: probable E3 ubiquitin-protein ligase LOG2 [Cucumis melo]
          Length = 368

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 29/45 (64%), Positives = 31/45 (68%)
 Frame = -3

Query: 291 MGNVGSSSVNGRRRQGSRRNHXXXXXXXXXXPEITANRYVFAAAT 157
           MGN+GSS  N RRR GSRRNH          PEIT+NRYVFAAAT
Sbjct: 1   MGNIGSSGSNARRRHGSRRNHPTPPPPPPPQPEITSNRYVFAAAT 45


>OMO73522.1 Zinc finger, RING-type [Corchorus olitorius]
          Length = 386

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 32/48 (66%), Positives = 33/48 (68%), Gaps = 3/48 (6%)
 Frame = -3

Query: 291 MGNVGSSSVNGRRRQGSRRNH---XXXXXXXXXXPEITANRYVFAAAT 157
           MGN+GSS VNGRRRQGSRRNH             PEI ANRYVFAAAT
Sbjct: 1   MGNIGSSGVNGRRRQGSRRNHPPPPPPPPPAQPQPEIPANRYVFAAAT 48


>ACA35274.1 zinc finger RING-type protein [Cucumis sativus]
          Length = 230

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 28/45 (62%), Positives = 31/45 (68%)
 Frame = -3

Query: 291 MGNVGSSSVNGRRRQGSRRNHXXXXXXXXXXPEITANRYVFAAAT 157
           MGN+GSS  N RRR G+RRNH          PEIT+NRYVFAAAT
Sbjct: 1   MGNIGSSGSNARRRHGTRRNHPTPPPPPPPQPEITSNRYVFAAAT 45


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