BLASTX nr result
ID: Panax25_contig00031682
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax25_contig00031682
(1060 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AHJ81020.1 ribosomal protein S4 (mitochondrion) [Panax ginseng] 157 2e-41
YP_008802509.1 ribosomal protein S4 (mitochondrion) [Asclepias s... 153 1e-40
YP_005090486.1 ribosomal protein S4 (mitochondrion) [Lotus japon... 147 1e-37
BAD83538.2 ribosomal protein S4, partial (mitochondrion) [Nicoti... 144 1e-36
YP_005090450.1 ribosomal protein S4 (mitochondrion) [Millettia p... 140 4e-35
YP_003587235.1 ribosomal protein S4 [Citrullus lanatus] ACV96653... 139 1e-34
YP_717175.1 ribosomal protein S4 [Brassica napus] BAC98926.1 rib... 137 1e-33
Q31708.2 RecName: Full=Ribosomal protein S4, mitochondrial 137 1e-33
ACH78250.1 ribosomal protein S4 (mitochondrion) [Arabidopsis tha... 137 1e-33
YP_005090421.1 rps4 gene product (mitochondrion) [Dorcoceras hyg... 135 3e-33
JAT46777.1 Ribosomal protein S4, mitochondrial, partial [Anthuri... 134 9e-33
YP_009173840.1 ribosomal protein S4 (mitochondrion) [Populus tre... 133 1e-32
AKQ51033.1 ribosomal protein subunit S4 (mitochondrion) [Bartsia... 134 1e-32
YP_009316400.1 ribosomal protein S4 (mitochondrion) [Castilleja ... 130 4e-32
EEF27209.1 Mitochondrial ribosomal protein S4, putative [Ricinus... 130 4e-32
YP_009305175.1 ribosomal protein subunit S4 (mitochondrion) [Hes... 132 7e-32
YP_006291840.1 ribosomal protein S4 (mitochondrion) [Daucus caro... 129 1e-31
ALJ78540.1 ribosomal protein S4, partial (mitochondrion) [Malus ... 131 1e-31
AHX81376.1 ribosomal protein S4 (mitochondrion) [Hirtella racemo... 131 1e-31
YP_003587372.1 ribosomal protein S4 [Cucurbita pepo] ACV96696.1 ... 131 2e-31
>AHJ81020.1 ribosomal protein S4 (mitochondrion) [Panax ginseng]
Length = 355
Score = 157 bits (397), Expect = 2e-41
Identities = 80/101 (79%), Positives = 82/101 (81%)
Frame = -2
Query: 648 HD*TKRNFDQSXXXXXXXXXXXXXLPTRPIVYNSSFYSNSTYCSASPHQFTMKRKRKRVE 469
H+ KRNFDQS LPTRPIVYNSSFYSNSTYCSASPHQFTMKRKRKRVE
Sbjct: 247 HNRMKRNFDQSLFLLKRRNEKNLNLPTRPIVYNSSFYSNSTYCSASPHQFTMKRKRKRVE 306
Query: 468 LPTHYLEVNYRTLKAVVFYGPSIGHIPHDIRLKDLNLLLWS 346
LPTHY EVN+RTLKAVV YGPSIGHIPHDIRLKD NLLL S
Sbjct: 307 LPTHYSEVNHRTLKAVVSYGPSIGHIPHDIRLKDPNLLLRS 347
>YP_008802509.1 ribosomal protein S4 (mitochondrion) [Asclepias syriaca] AGZ63043.1
ribosomal protein S4 (mitochondrion) (mitochondrion)
[Asclepias syriaca]
Length = 274
Score = 153 bits (386), Expect = 1e-40
Identities = 73/79 (92%), Positives = 75/79 (94%), Gaps = 3/79 (3%)
Frame = -2
Query: 573 PTR---PIVYNSSFYSNSTYCSASPHQFTMKRKRKRVELPTHYLEVNYRTLKAVVFYGPS 403
PTR PIVYNSS YSNSTYCSASPHQFTMKRKRKR+ELPTHYLEVNYRTLKAVVFYGP+
Sbjct: 188 PTRTRSPIVYNSSLYSNSTYCSASPHQFTMKRKRKRIELPTHYLEVNYRTLKAVVFYGPN 247
Query: 402 IGHIPHDIRLKDLNLLLWS 346
IGHIPHDIRLKDLNLLLWS
Sbjct: 248 IGHIPHDIRLKDLNLLLWS 266
>YP_005090486.1 ribosomal protein S4 (mitochondrion) [Lotus japonicus] AET62946.1
ribosomal protein S4 (mitochondrion) [Lotus japonicus]
Length = 358
Score = 147 bits (372), Expect = 1e-37
Identities = 70/79 (88%), Positives = 74/79 (93%), Gaps = 3/79 (3%)
Frame = -2
Query: 573 PTR---PIVYNSSFYSNSTYCSASPHQFTMKRKRKRVELPTHYLEVNYRTLKAVVFYGPS 403
PTR PIVYNSS YSNSTYCS+SPHQFTMKR+ KR+ELPTHYLEVNYRTLKAVVFYGP+
Sbjct: 272 PTRTRSPIVYNSSLYSNSTYCSSSPHQFTMKRRIKRIELPTHYLEVNYRTLKAVVFYGPN 331
Query: 402 IGHIPHDIRLKDLNLLLWS 346
IGHIPHDIRLKDLNLLLWS
Sbjct: 332 IGHIPHDIRLKDLNLLLWS 350
>BAD83538.2 ribosomal protein S4, partial (mitochondrion) [Nicotiana tabacum]
Length = 349
Score = 144 bits (364), Expect = 1e-36
Identities = 70/79 (88%), Positives = 72/79 (91%), Gaps = 3/79 (3%)
Frame = -2
Query: 573 PTR---PIVYNSSFYSNSTYCSASPHQFTMKRKRKRVELPTHYLEVNYRTLKAVVFYGPS 403
PTR PIVYNSS YSNSTYCSASPHQFT K K KR+ELPTHYLEVNYRTLKAVVFYGP+
Sbjct: 263 PTRTRSPIVYNSSLYSNSTYCSASPHQFTKKIKIKRIELPTHYLEVNYRTLKAVVFYGPN 322
Query: 402 IGHIPHDIRLKDLNLLLWS 346
IGHIPHDIRLKDLNLLLWS
Sbjct: 323 IGHIPHDIRLKDLNLLLWS 341
>YP_005090450.1 ribosomal protein S4 (mitochondrion) [Millettia pinnata]
YP_005090457.1 ribosomal protein S4 (mitochondrion)
[Millettia pinnata] AET62910.1 ribosomal protein S4
(mitochondrion) [Millettia pinnata] AET62917.1 ribosomal
protein S4 (mitochondrion) [Millettia pinnata]
Length = 358
Score = 140 bits (354), Expect = 4e-35
Identities = 68/79 (86%), Positives = 72/79 (91%), Gaps = 3/79 (3%)
Frame = -2
Query: 573 PTR---PIVYNSSFYSNSTYCSASPHQFTMKRKRKRVELPTHYLEVNYRTLKAVVFYGPS 403
PTR PIV SS YSNSTYCS+SPHQFTMKR+ KR+ELPTHYLEVNYRTLKAVVFYGP+
Sbjct: 272 PTRTRSPIVDYSSLYSNSTYCSSSPHQFTMKRRIKRIELPTHYLEVNYRTLKAVVFYGPN 331
Query: 402 IGHIPHDIRLKDLNLLLWS 346
IGHIPHDIRLKDLNLLLWS
Sbjct: 332 IGHIPHDIRLKDLNLLLWS 350
>YP_003587235.1 ribosomal protein S4 [Citrullus lanatus] ACV96653.1 ribosomal
protein S4 (mitochondrion) [Citrullus lanatus]
Length = 355
Score = 139 bits (351), Expect = 1e-34
Identities = 69/79 (87%), Positives = 71/79 (89%), Gaps = 3/79 (3%)
Frame = -2
Query: 573 PTR---PIVYNSSFYSNSTYCSASPHQFTMKRKRKRVELPTHYLEVNYRTLKAVVFYGPS 403
PTR PIVYNSS YSNSTYCSASPHQFTMK K KR+ELPTHYLEVNYRTLKAVVFYGP+
Sbjct: 269 PTRTRSPIVYNSSLYSNSTYCSASPHQFTMKSKIKRIELPTHYLEVNYRTLKAVVFYGPN 328
Query: 402 IGHIPHDIRLKDLNLLLWS 346
IGHIPHDIRLKDLNL L S
Sbjct: 329 IGHIPHDIRLKDLNLPLRS 347
>YP_717175.1 ribosomal protein S4 [Brassica napus] BAC98926.1 ribosomal protein
S4 (mitochondrion) [Brassica napus]
Length = 362
Score = 137 bits (344), Expect = 1e-33
Identities = 73/106 (68%), Positives = 78/106 (73%), Gaps = 5/106 (4%)
Frame = -2
Query: 648 HD*TKRNFDQSXXXXXXXXXXXXXLPTR---PIVYNSSF--YSNSTYCSASPHQFTMKRK 484
H KRN +S LPTR PIVYNSS YSNSTYC ASPH+ TMKR+
Sbjct: 249 HKRMKRNLLKSLFLSKRRKEKNLNLPTRTISPIVYNSSLSLYSNSTYCFASPHKLTMKRR 308
Query: 483 RKRVELPTHYLEVNYRTLKAVVFYGPSIGHIPHDIRLKDLNLLLWS 346
KR+ELPTHYLEVNYRT KAVVFYGP+IGHIPHDIRLKDLNLLLWS
Sbjct: 309 IKRIELPTHYLEVNYRTPKAVVFYGPNIGHIPHDIRLKDLNLLLWS 354
>Q31708.2 RecName: Full=Ribosomal protein S4, mitochondrial
Length = 362
Score = 137 bits (344), Expect = 1e-33
Identities = 73/106 (68%), Positives = 78/106 (73%), Gaps = 5/106 (4%)
Frame = -2
Query: 648 HD*TKRNFDQSXXXXXXXXXXXXXLPTR---PIVYNSSF--YSNSTYCSASPHQFTMKRK 484
H KRN +S LPTR PIVYNSS YSNSTYC ASPH+ TMKR+
Sbjct: 249 HKRMKRNLLKSLFLSKRRKDKNLNLPTRTISPIVYNSSLSLYSNSTYCFASPHKLTMKRR 308
Query: 483 RKRVELPTHYLEVNYRTLKAVVFYGPSIGHIPHDIRLKDLNLLLWS 346
KR+ELPTHYLEVNYRT KAVVFYGP+IGHIPHDIRLKDLNLLLWS
Sbjct: 309 IKRIELPTHYLEVNYRTPKAVVFYGPNIGHIPHDIRLKDLNLLLWS 354
>ACH78250.1 ribosomal protein S4 (mitochondrion) [Arabidopsis thaliana]
Length = 362
Score = 137 bits (344), Expect = 1e-33
Identities = 73/106 (68%), Positives = 78/106 (73%), Gaps = 5/106 (4%)
Frame = -2
Query: 648 HD*TKRNFDQSXXXXXXXXXXXXXLPTR---PIVYNSSF--YSNSTYCSASPHQFTMKRK 484
H KRN +S LPTR PIVYNSS YSNSTYC ASPH+ TMKR+
Sbjct: 249 HKRMKRNLLKSLFLSKRRKDKNLNLPTRTISPIVYNSSLSLYSNSTYCFASPHKLTMKRR 308
Query: 483 RKRVELPTHYLEVNYRTLKAVVFYGPSIGHIPHDIRLKDLNLLLWS 346
KR+ELPTHYLEVNYRT KAVVFYGP+IGHIPHDIRLKDLNLLLWS
Sbjct: 309 IKRIELPTHYLEVNYRTPKAVVFYGPNIGHIPHDIRLKDLNLLLWS 354
>YP_005090421.1 rps4 gene product (mitochondrion) [Dorcoceras hygrometricum]
AEK53318.1 ribosomal protein S4 (mitochondrion)
[Dorcoceras hygrometricum]
Length = 329
Score = 135 bits (339), Expect = 3e-33
Identities = 67/79 (84%), Positives = 70/79 (88%), Gaps = 3/79 (3%)
Frame = -2
Query: 573 PTR---PIVYNSSFYSNSTYCSASPHQFTMKRKRKRVELPTHYLEVNYRTLKAVVFYGPS 403
PTR PIVYNSS YSNSTYCSASPHQFTMKRK KR+ELPTHY EVN+RT KAVVFYGP+
Sbjct: 243 PTRTRNPIVYNSSLYSNSTYCSASPHQFTMKRKIKRIELPTHYSEVNHRTPKAVVFYGPN 302
Query: 402 IGHIPHDIRLKDLNLLLWS 346
IGHIPHDIRLKD NLLL S
Sbjct: 303 IGHIPHDIRLKDPNLLLRS 321
>JAT46777.1 Ribosomal protein S4, mitochondrial, partial [Anthurium amnicola]
JAT60101.1 Ribosomal protein S4, mitochondrial, partial
[Anthurium amnicola]
Length = 363
Score = 134 bits (338), Expect = 9e-33
Identities = 64/79 (81%), Positives = 68/79 (86%), Gaps = 3/79 (3%)
Frame = -2
Query: 573 PTR---PIVYNSSFYSNSTYCSASPHQFTMKRKRKRVELPTHYLEVNYRTLKAVVFYGPS 403
PTR P VY SS YSNSTYCS SPHQF KR+ KR+ELPTHYLEVN+RT KAVVFYGP+
Sbjct: 277 PTRTKSPFVYKSSLYSNSTYCSGSPHQFPRKRRIKRIELPTHYLEVNHRTKKAVVFYGPN 336
Query: 402 IGHIPHDIRLKDLNLLLWS 346
IGHIPHDIRLKDLNLLLWS
Sbjct: 337 IGHIPHDIRLKDLNLLLWS 355
>YP_009173840.1 ribosomal protein S4 (mitochondrion) [Populus tremula]
YP_009178738.1 ribosomal protein S4 (mitochondrion)
[Populus tremula x Populus alba] YP_009230379.1
ribosomal protein S4 (mitochondrion) [Salix suchowensis]
YP_009239012.1 ribosomal protein S4 (mitochondrion)
[Salix purpurea] ALH07315.1 ribosomal protein S4
(mitochondrion) [Populus tremula] ALJ49771.1 ribosomal
protein S4 (mitochondrion) [Populus tremula x Populus
alba] AMF83900.1 ribosomal protein S4 (mitochondrion)
[Salix suchowensis] AMO27196.1 ribosomal protein S4
(mitochondrion) [Salix purpurea]
Length = 322
Score = 133 bits (335), Expect = 1e-32
Identities = 64/79 (81%), Positives = 70/79 (88%), Gaps = 3/79 (3%)
Frame = -2
Query: 573 PTR---PIVYNSSFYSNSTYCSASPHQFTMKRKRKRVELPTHYLEVNYRTLKAVVFYGPS 403
PTR PIVYN S YSNS YCSASP ++TMKR+ KR+ELPTHY+EVNYRTLKAVV YGP+
Sbjct: 236 PTRIRSPIVYNYSLYSNSIYCSASPQKWTMKRRIKRIELPTHYVEVNYRTLKAVVSYGPN 295
Query: 402 IGHIPHDIRLKDLNLLLWS 346
IGHIPHDIRLKDLNLLLWS
Sbjct: 296 IGHIPHDIRLKDLNLLLWS 314
>AKQ51033.1 ribosomal protein subunit S4 (mitochondrion) [Bartsia sp. JPM2059]
Length = 344
Score = 134 bits (336), Expect = 1e-32
Identities = 64/73 (87%), Positives = 67/73 (91%)
Frame = -2
Query: 564 PIVYNSSFYSNSTYCSASPHQFTMKRKRKRVELPTHYLEVNYRTLKAVVFYGPSIGHIPH 385
PIVYNSS YSNSTYCSASPHQFTMKRKRKR+ELPTHY EVN+RT KAVV YGP+IGHIPH
Sbjct: 264 PIVYNSSLYSNSTYCSASPHQFTMKRKRKRIELPTHYSEVNHRTPKAVVSYGPNIGHIPH 323
Query: 384 DIRLKDLNLLLWS 346
DIRLKD NLLL S
Sbjct: 324 DIRLKDPNLLLRS 336
>YP_009316400.1 ribosomal protein S4 (mitochondrion) [Castilleja paramensis]
ANJ04360.1 ribosomal protein S4 (mitochondrion)
[Castilleja paramensis]
Length = 272
Score = 130 bits (328), Expect = 4e-32
Identities = 63/73 (86%), Positives = 66/73 (90%)
Frame = -2
Query: 564 PIVYNSSFYSNSTYCSASPHQFTMKRKRKRVELPTHYLEVNYRTLKAVVFYGPSIGHIPH 385
PIVYNSS YSNSTYCSASPHQFTMKRK KR+ELPTHY EVN+RT KAVV YGP+IGHIPH
Sbjct: 192 PIVYNSSLYSNSTYCSASPHQFTMKRKIKRIELPTHYSEVNHRTPKAVVSYGPNIGHIPH 251
Query: 384 DIRLKDLNLLLWS 346
DIRLKD NLLL S
Sbjct: 252 DIRLKDPNLLLRS 264
>EEF27209.1 Mitochondrial ribosomal protein S4, putative [Ricinus communis]
Length = 276
Score = 130 bits (328), Expect = 4e-32
Identities = 65/79 (82%), Positives = 68/79 (86%), Gaps = 3/79 (3%)
Frame = -2
Query: 573 PTR---PIVYNSSFYSNSTYCSASPHQFTMKRKRKRVELPTHYLEVNYRTLKAVVFYGPS 403
PTR PIVYNSS YSNS YCSASPHQFTMKR+ KR+ELPTHY EVN+RTLKAVV YGP
Sbjct: 190 PTRIRSPIVYNSSLYSNSIYCSASPHQFTMKRRIKRIELPTHYSEVNHRTLKAVVSYGPK 249
Query: 402 IGHIPHDIRLKDLNLLLWS 346
IGHIPHDIRLKDLNL L S
Sbjct: 250 IGHIPHDIRLKDLNLPLRS 268
>YP_009305175.1 ribosomal protein subunit S4 (mitochondrion) [Hesperelaea palmeri]
AOO96380.1 ribosomal protein subunit S4 (mitochondrion)
[Hesperelaea palmeri]
Length = 348
Score = 132 bits (331), Expect = 7e-32
Identities = 66/79 (83%), Positives = 69/79 (87%), Gaps = 3/79 (3%)
Frame = -2
Query: 573 PTR---PIVYNSSFYSNSTYCSASPHQFTMKRKRKRVELPTHYLEVNYRTLKAVVFYGPS 403
PTR PIVYNSS YSNSTYCSASPHQFTMKRK KR+ELPTHY EVN+RT KAVV YGP+
Sbjct: 262 PTRTRSPIVYNSSLYSNSTYCSASPHQFTMKRKIKRIELPTHYSEVNHRTPKAVVSYGPN 321
Query: 402 IGHIPHDIRLKDLNLLLWS 346
IGHIPHDIRLKD NLLL S
Sbjct: 322 IGHIPHDIRLKDPNLLLRS 340
>YP_006291840.1 ribosomal protein S4 (mitochondrion) [Daucus carota subsp. sativus]
AEY81145.1 ribosomal protein S4 (mitochondrion) [Daucus
carota subsp. sativus] KZM81313.1 ribosomal protein S4
(mitochondrion) [Daucus carota subsp. sativus]
Length = 279
Score = 129 bits (325), Expect = 1e-31
Identities = 65/79 (82%), Positives = 68/79 (86%), Gaps = 3/79 (3%)
Frame = -2
Query: 573 PTR---PIVYNSSFYSNSTYCSASPHQFTMKRKRKRVELPTHYLEVNYRTLKAVVFYGPS 403
PTR PIVYNSS YSNSTYCSA HQFTMKRK KR+ELPTHY EVN+RTLKAVV YGP+
Sbjct: 193 PTRTRSPIVYNSSLYSNSTYCSAPSHQFTMKRKIKRIELPTHYSEVNHRTLKAVVSYGPN 252
Query: 402 IGHIPHDIRLKDLNLLLWS 346
IGHIPHDIRLKD NLLL S
Sbjct: 253 IGHIPHDIRLKDPNLLLRS 271
>ALJ78540.1 ribosomal protein S4, partial (mitochondrion) [Malus hupehensis
var. mengshanensis]
Length = 359
Score = 131 bits (330), Expect = 1e-31
Identities = 65/79 (82%), Positives = 69/79 (87%), Gaps = 3/79 (3%)
Frame = -2
Query: 573 PTR---PIVYNSSFYSNSTYCSASPHQFTMKRKRKRVELPTHYLEVNYRTLKAVVFYGPS 403
PTR PIVYNSS Y NSTYCSASPHQFTMKR+ KR+ELPTHY EVN+RTLKAVV YGP+
Sbjct: 273 PTRTRSPIVYNSSLYRNSTYCSASPHQFTMKRRIKRIELPTHYSEVNHRTLKAVVSYGPN 332
Query: 402 IGHIPHDIRLKDLNLLLWS 346
IGHIPHDIRLKDLNL L S
Sbjct: 333 IGHIPHDIRLKDLNLPLRS 351
>AHX81376.1 ribosomal protein S4 (mitochondrion) [Hirtella racemosa] AHX81379.1
ribosomal protein S4 (mitochondrion) [Hirtella
physophora] AHX81385.1 ribosomal protein S4
(mitochondrion) [Licania heteromorpha] AHX81388.1
ribosomal protein S4 (mitochondrion) [Chrysobalanus
icaco] AHX81391.1 ribosomal protein S4 (mitochondrion)
[Parinari campestris] AHX81394.1 ribosomal protein S4
(mitochondrion) [Licania sprucei] AHX81397.1 ribosomal
protein S4 (mitochondrion) [Licania alba]
Length = 353
Score = 131 bits (329), Expect = 1e-31
Identities = 65/79 (82%), Positives = 69/79 (87%), Gaps = 3/79 (3%)
Frame = -2
Query: 573 PTR---PIVYNSSFYSNSTYCSASPHQFTMKRKRKRVELPTHYLEVNYRTLKAVVFYGPS 403
PTR PIVYNSS YSNS YCSASPHQFTMKR+ KR+ELPTHY EVN+RTLKAVV YGP+
Sbjct: 267 PTRIRSPIVYNSSLYSNSIYCSASPHQFTMKRRIKRIELPTHYSEVNHRTLKAVVSYGPN 326
Query: 402 IGHIPHDIRLKDLNLLLWS 346
IGHIPHDIRLKDLNL L S
Sbjct: 327 IGHIPHDIRLKDLNLPLRS 345
>YP_003587372.1 ribosomal protein S4 [Cucurbita pepo] ACV96696.1 ribosomal protein
S4 (mitochondrion) [Cucurbita pepo]
Length = 356
Score = 131 bits (329), Expect = 2e-31
Identities = 66/79 (83%), Positives = 67/79 (84%), Gaps = 3/79 (3%)
Frame = -2
Query: 573 PTR---PIVYNSSFYSNSTYCSASPHQFTMKRKRKRVELPTHYLEVNYRTLKAVVFYGPS 403
PTR PIVYNSS YSN TYCSASPHQFTMK K KR+ELPTHYLEVNYRTLKAVV YGP
Sbjct: 270 PTRRISPIVYNSSLYSNYTYCSASPHQFTMKSKIKRIELPTHYLEVNYRTLKAVVSYGPK 329
Query: 402 IGHIPHDIRLKDLNLLLWS 346
IGHIPHDIRLKD NL L S
Sbjct: 330 IGHIPHDIRLKDPNLPLRS 348