BLASTX nr result

ID: Panax25_contig00031583 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00031583
         (430 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017228624.1 PREDICTED: pentatricopeptide repeat-containing pr...    62   2e-08

>XP_017228624.1 PREDICTED: pentatricopeptide repeat-containing protein At5g41170,
           mitochondrial [Daucus carota subsp. sativus]
           XP_017228629.1 PREDICTED: pentatricopeptide
           repeat-containing protein At5g41170, mitochondrial
           [Daucus carota subsp. sativus] XP_017228637.1 PREDICTED:
           pentatricopeptide repeat-containing protein At5g41170,
           mitochondrial [Daucus carota subsp. sativus]
           XP_017228640.1 PREDICTED: pentatricopeptide
           repeat-containing protein At5g41170, mitochondrial
           [Daucus carota subsp. sativus] XP_017228644.1 PREDICTED:
           pentatricopeptide repeat-containing protein At5g41170,
           mitochondrial [Daucus carota subsp. sativus]
           XP_017228650.1 PREDICTED: pentatricopeptide
           repeat-containing protein At5g41170, mitochondrial
           [Daucus carota subsp. sativus] XP_017228655.1 PREDICTED:
           pentatricopeptide repeat-containing protein At5g41170,
           mitochondrial [Daucus carota subsp. sativus]
          Length = 826

 Score = 62.0 bits (149), Expect = 2e-08
 Identities = 30/63 (47%), Positives = 40/63 (63%)
 Frame = +1

Query: 163 CSENNLIRPIACNGLSVYFSSWSSQNPNHNSHLNPNVCAQLVEKDIFDEGDNGCVRVKET 342
           C E++LI P  C G+  YFS+ S +N   +S  + NVCAQLV+KD FD G +G V V+  
Sbjct: 25  CCESSLISPFHCEGVCAYFSTNSWRNSCESSRFDANVCAQLVDKDDFDGGGDGSVEVENL 84

Query: 343 GER 351
           G R
Sbjct: 85  GGR 87


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