BLASTX nr result

ID: Panax25_contig00031508 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00031508
         (570 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_007046988.2 PREDICTED: pentatricopeptide repeat-containing pr...    67   7e-10
EOX91145.1 Tetratricopeptide repeat (TPR)-like superfamily prote...    67   7e-10
OMO56867.1 hypothetical protein CCACVL1_26203 [Corchorus capsula...    66   2e-09
OMO84333.1 hypothetical protein COLO4_22110 [Corchorus olitorius]      63   2e-08
XP_010437321.1 PREDICTED: pentatricopeptide repeat-containing pr...    62   5e-08
XP_010432150.1 PREDICTED: pentatricopeptide repeat-containing pr...    62   5e-08
XP_006282615.1 hypothetical protein CARUB_v10004839mg, partial [...    61   1e-07
XP_012436918.1 PREDICTED: pentatricopeptide repeat-containing pr...    61   1e-07
XP_016735240.1 PREDICTED: pentatricopeptide repeat-containing pr...    61   1e-07
XP_006411973.1 hypothetical protein EUTSA_v10027579mg [Eutrema s...    60   2e-07
XP_017637318.1 PREDICTED: pentatricopeptide repeat-containing pr...    60   3e-07
XP_016713059.1 PREDICTED: pentatricopeptide repeat-containing pr...    60   3e-07
NP_195386.1 Tetratricopeptide repeat (TPR)-like superfamily prot...    59   4e-07
XP_010446761.1 PREDICTED: pentatricopeptide repeat-containing pr...    59   4e-07
CAA05629.1 membrane-associated salt-inducible protein like, part...    59   4e-07
XP_006410778.1 hypothetical protein EUTSA_v10017741mg, partial [...    59   6e-07
XP_002866998.1 pentatricopeptide repeat-containing protein [Arab...    59   8e-07
KDO79503.1 hypothetical protein CISIN_1g015673mg [Citrus sinensis]     58   1e-06
XP_006425713.1 hypothetical protein CICLE_v10025762mg [Citrus cl...    58   1e-06
XP_009109332.1 PREDICTED: pentatricopeptide repeat-containing pr...    58   1e-06

>XP_007046988.2 PREDICTED: pentatricopeptide repeat-containing protein At4g36680,
           mitochondrial [Theobroma cacao]
          Length = 411

 Score = 67.4 bits (163), Expect = 7e-10
 Identities = 31/45 (68%), Positives = 39/45 (86%), Gaps = 2/45 (4%)
 Frame = -3

Query: 568 KDAKGLIRTAKKKFPPSFLNSWEKIEEEFGLVSANS--GDVQEAR 440
           K+AKGLIRT KKKFPP+FLN+W+K+EEE GLVS N+  G+ QEA+
Sbjct: 363 KEAKGLIRTVKKKFPPNFLNAWKKLEEELGLVSGNAGGGEAQEAK 407


>EOX91145.1 Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
           cacao]
          Length = 411

 Score = 67.4 bits (163), Expect = 7e-10
 Identities = 31/45 (68%), Positives = 39/45 (86%), Gaps = 2/45 (4%)
 Frame = -3

Query: 568 KDAKGLIRTAKKKFPPSFLNSWEKIEEEFGLVSANS--GDVQEAR 440
           K+AKGLIRT KKKFPP+FLN+W+K+EEE GLVS N+  G+ QEA+
Sbjct: 363 KEAKGLIRTVKKKFPPNFLNAWKKLEEELGLVSGNAGGGEAQEAK 407


>OMO56867.1 hypothetical protein CCACVL1_26203 [Corchorus capsularis]
          Length = 409

 Score = 65.9 bits (159), Expect = 2e-09
 Identities = 30/45 (66%), Positives = 38/45 (84%), Gaps = 2/45 (4%)
 Frame = -3

Query: 568 KDAKGLIRTAKKKFPPSFLNSWEKIEEEFGLVSAN--SGDVQEAR 440
           KDAKGLIRT KK FPP+FLN+W+K+EEE GLVS N  +G+ Q+A+
Sbjct: 361 KDAKGLIRTVKKTFPPNFLNAWQKLEEELGLVSGNAAAGEAQQAK 405


>OMO84333.1 hypothetical protein COLO4_22110 [Corchorus olitorius]
          Length = 409

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 29/45 (64%), Positives = 38/45 (84%), Gaps = 2/45 (4%)
 Frame = -3

Query: 568 KDAKGLIRTAKKKFPPSFLNSWEKIEEEFGLVS--ANSGDVQEAR 440
           KDAKGLIRT KK FPP+FLN+W+K+E+E GLVS  A +G+ Q+A+
Sbjct: 361 KDAKGLIRTVKKTFPPNFLNAWQKLEQELGLVSGDAAAGEAQQAK 405


>XP_010437321.1 PREDICTED: pentatricopeptide repeat-containing protein At4g36680,
           mitochondrial [Camelina sativa]
          Length = 412

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 27/41 (65%), Positives = 32/41 (78%)
 Frame = -3

Query: 565 DAKGLIRTAKKKFPPSFLNSWEKIEEEFGLVSANSGDVQEA 443
           DAKGLIRT KKKFPPSF+N+W+K+EEE GL S      +EA
Sbjct: 370 DAKGLIRTVKKKFPPSFMNAWKKLEEELGLYSKTDASAKEA 410


>XP_010432150.1 PREDICTED: pentatricopeptide repeat-containing protein At4g36680,
           mitochondrial-like [Camelina sativa]
          Length = 412

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 27/41 (65%), Positives = 32/41 (78%)
 Frame = -3

Query: 565 DAKGLIRTAKKKFPPSFLNSWEKIEEEFGLVSANSGDVQEA 443
           DAKGLIRT KKKFPPSF+N+W+K+EEE GL S      +EA
Sbjct: 370 DAKGLIRTVKKKFPPSFMNAWKKLEEELGLYSKTDASAKEA 410


>XP_006282615.1 hypothetical protein CARUB_v10004839mg, partial [Capsella rubella]
           EOA15513.1 hypothetical protein CARUB_v10004839mg,
           partial [Capsella rubella]
          Length = 435

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 27/41 (65%), Positives = 32/41 (78%)
 Frame = -3

Query: 565 DAKGLIRTAKKKFPPSFLNSWEKIEEEFGLVSANSGDVQEA 443
           DAKGLIRT KKKFPPSF+N+W+K+EEE GL S      +EA
Sbjct: 393 DAKGLIRTVKKKFPPSFMNAWKKLEEELGLDSKTDASAKEA 433


>XP_012436918.1 PREDICTED: pentatricopeptide repeat-containing protein At4g36680,
           mitochondrial [Gossypium raimondii] KJB48422.1
           hypothetical protein B456_008G068700 [Gossypium
           raimondii]
          Length = 408

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 28/43 (65%), Positives = 36/43 (83%)
 Frame = -3

Query: 568 KDAKGLIRTAKKKFPPSFLNSWEKIEEEFGLVSANSGDVQEAR 440
           KDAKGLIRT KK FPP+FL +W+K+EEE GLVS N+ + +EA+
Sbjct: 363 KDAKGLIRTVKKTFPPNFLKAWKKLEEELGLVSGNA-EAREAK 404


>XP_016735240.1 PREDICTED: pentatricopeptide repeat-containing protein At4g36680,
           mitochondrial-like [Gossypium hirsutum]
          Length = 409

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 28/43 (65%), Positives = 36/43 (83%)
 Frame = -3

Query: 568 KDAKGLIRTAKKKFPPSFLNSWEKIEEEFGLVSANSGDVQEAR 440
           KDAKGLIRT KK FPP+FL +W+K+EEE GLVS N+ + +EA+
Sbjct: 364 KDAKGLIRTVKKTFPPNFLKAWKKLEEELGLVSGNA-EAREAK 405


>XP_006411973.1 hypothetical protein EUTSA_v10027579mg [Eutrema salsugineum]
           ESQ53426.1 hypothetical protein EUTSA_v10027579mg
           [Eutrema salsugineum]
          Length = 410

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 27/41 (65%), Positives = 31/41 (75%)
 Frame = -3

Query: 565 DAKGLIRTAKKKFPPSFLNSWEKIEEEFGLVSANSGDVQEA 443
           DAKGLIRT KKKFPPSFLN+W+K+EEE GL+S        A
Sbjct: 370 DAKGLIRTVKKKFPPSFLNAWKKLEEEVGLLSKTDASSSSA 410


>XP_017637318.1 PREDICTED: pentatricopeptide repeat-containing protein At4g36680,
           mitochondrial [Gossypium arboreum]
          Length = 409

 Score = 59.7 bits (143), Expect = 3e-07
 Identities = 28/43 (65%), Positives = 36/43 (83%)
 Frame = -3

Query: 568 KDAKGLIRTAKKKFPPSFLNSWEKIEEEFGLVSANSGDVQEAR 440
           KDAKGLIRT KK FPP+FL +W+K+EEE GLVS N+ + +EA+
Sbjct: 364 KDAKGLIRTVKKTFPPNFLIAWKKLEEELGLVSGNA-EAREAK 405


>XP_016713059.1 PREDICTED: pentatricopeptide repeat-containing protein At4g36680,
           mitochondrial-like [Gossypium hirsutum]
          Length = 413

 Score = 59.7 bits (143), Expect = 3e-07
 Identities = 28/43 (65%), Positives = 36/43 (83%)
 Frame = -3

Query: 568 KDAKGLIRTAKKKFPPSFLNSWEKIEEEFGLVSANSGDVQEAR 440
           KDAKGLIRT KK FPP+FL +W+K+EEE GLVS N+ + +EA+
Sbjct: 368 KDAKGLIRTVKKTFPPNFLIAWKKLEEELGLVSGNA-EAREAK 409


>NP_195386.1 Tetratricopeptide repeat (TPR)-like superfamily protein
           [Arabidopsis thaliana] Q9M065.1 RecName:
           Full=Pentatricopeptide repeat-containing protein
           At4g36680, mitochondrial; Flags: Precursor CAB16807.1
           salt-inducible like protein [Arabidopsis thaliana]
           CAB80334.1 salt-inducible like protein [Arabidopsis
           thaliana] AAL36061.1 C7A10_680/C7A10_680 [Arabidopsis
           thaliana] AAN46757.1 At4g36680/C7A10_680 [Arabidopsis
           thaliana] AEE86686.1 Tetratricopeptide repeat (TPR)-like
           superfamily protein [Arabidopsis thaliana] OAO99432.1
           hypothetical protein AXX17_AT4G41780 [Arabidopsis
           thaliana]
          Length = 412

 Score = 59.3 bits (142), Expect = 4e-07
 Identities = 26/32 (81%), Positives = 29/32 (90%)
 Frame = -3

Query: 565 DAKGLIRTAKKKFPPSFLNSWEKIEEEFGLVS 470
           DAKGLIRT KKKFPPSFLN+W+K+EEE GL S
Sbjct: 366 DAKGLIRTVKKKFPPSFLNAWKKLEEELGLYS 397


>XP_010446761.1 PREDICTED: pentatricopeptide repeat-containing protein At4g36680,
           mitochondrial-like [Camelina sativa]
          Length = 415

 Score = 59.3 bits (142), Expect = 4e-07
 Identities = 26/42 (61%), Positives = 31/42 (73%)
 Frame = -3

Query: 565 DAKGLIRTAKKKFPPSFLNSWEKIEEEFGLVSANSGDVQEAR 440
           DAKGLIRT KKKFPPSF+N+W+K+EEE GL S        A+
Sbjct: 370 DAKGLIRTVKKKFPPSFMNAWKKLEEELGLYSNTDASPSSAK 411


>CAA05629.1 membrane-associated salt-inducible protein like, partial
           [Arabidopsis thaliana]
          Length = 428

 Score = 59.3 bits (142), Expect = 4e-07
 Identities = 26/32 (81%), Positives = 29/32 (90%)
 Frame = -3

Query: 565 DAKGLIRTAKKKFPPSFLNSWEKIEEEFGLVS 470
           DAKGLIRT KKKFPPSFLN+W+K+EEE GL S
Sbjct: 382 DAKGLIRTVKKKFPPSFLNAWKKLEEELGLYS 413


>XP_006410778.1 hypothetical protein EUTSA_v10017741mg, partial [Eutrema
           salsugineum] ESQ52231.1 hypothetical protein
           EUTSA_v10017741mg, partial [Eutrema salsugineum]
          Length = 308

 Score = 58.5 bits (140), Expect = 6e-07
 Identities = 29/43 (67%), Positives = 33/43 (76%), Gaps = 3/43 (6%)
 Frame = -3

Query: 565 DAKGLIRTAKKKFPPSFLNSWEKIEEEFGLVS---ANSGDVQE 446
           DA GLIRTAK +FPPSFL+ WEK+EEE GLVS   A+S   QE
Sbjct: 263 DANGLIRTAKNEFPPSFLDEWEKLEEELGLVSKTDASSSSAQE 305


>XP_002866998.1 pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] EFH43257.1 pentatricopeptide
           repeat-containing protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 411

 Score = 58.5 bits (140), Expect = 8e-07
 Identities = 25/32 (78%), Positives = 29/32 (90%)
 Frame = -3

Query: 565 DAKGLIRTAKKKFPPSFLNSWEKIEEEFGLVS 470
           DAKGLIRT KKKFPPSF+N+W+K+EEE GL S
Sbjct: 366 DAKGLIRTVKKKFPPSFMNAWKKLEEELGLYS 397


>KDO79503.1 hypothetical protein CISIN_1g015673mg [Citrus sinensis]
          Length = 403

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 28/44 (63%), Positives = 36/44 (81%), Gaps = 1/44 (2%)
 Frame = -3

Query: 568 KDAKGLIRTAKKKFPPSFLNSWEKIEEEFGLVSANS-GDVQEAR 440
           K+AKG+IRT KKKFPP+ L +W+K+EEE GLV A + GD Q+AR
Sbjct: 359 KEAKGVIRTIKKKFPPNVLRAWKKVEEELGLVPAPAVGDGQKAR 402


>XP_006425713.1 hypothetical protein CICLE_v10025762mg [Citrus clementina]
           XP_006466769.1 PREDICTED: pentatricopeptide
           repeat-containing protein At4g36680, mitochondrial
           [Citrus sinensis] ESR38953.1 hypothetical protein
           CICLE_v10025762mg [Citrus clementina]
          Length = 403

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 28/44 (63%), Positives = 36/44 (81%), Gaps = 1/44 (2%)
 Frame = -3

Query: 568 KDAKGLIRTAKKKFPPSFLNSWEKIEEEFGLVSANS-GDVQEAR 440
           K+AKG+IRT KKKFPP+ L +W+K+EEE GLV A + GD Q+AR
Sbjct: 359 KEAKGVIRTIKKKFPPNVLRAWKKVEEELGLVPAPAVGDGQKAR 402


>XP_009109332.1 PREDICTED: pentatricopeptide repeat-containing protein At4g36680,
           mitochondrial [Brassica rapa]
          Length = 407

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 25/30 (83%), Positives = 28/30 (93%)
 Frame = -3

Query: 565 DAKGLIRTAKKKFPPSFLNSWEKIEEEFGL 476
           DAKGLIRT KKKFPPSFLN+W+K+EEE GL
Sbjct: 367 DAKGLIRTVKKKFPPSFLNAWKKLEEELGL 396


Top