BLASTX nr result
ID: Panax25_contig00031340
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax25_contig00031340
(665 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KYP76811.1 Retrovirus-related Pol polyprotein from transposon TN... 135 4e-33
KYP76810.1 Retrovirus-related Pol polyprotein from transposon TN... 135 4e-33
CAN75440.1 hypothetical protein VITISV_007304 [Vitis vinifera] 132 7e-32
KYP31799.1 Retrovirus-related Pol polyprotein from transposon TN... 126 1e-31
AAV88069.1 hypothetical retrotransposon [Ipomoea batatas] 131 2e-31
CAN74160.1 hypothetical protein VITISV_018405 [Vitis vinifera] 130 3e-31
KYP49350.1 Retrovirus-related Pol polyprotein from transposon TN... 121 4e-31
CAN70827.1 hypothetical protein VITISV_029099 [Vitis vinifera] 127 3e-30
KYP60296.1 Retrovirus-related Pol polyprotein from transposon TN... 127 3e-30
KYP53808.1 Retrovirus-related Pol polyprotein from transposon TN... 125 4e-30
XP_018729801.1 PREDICTED: uncharacterized protein LOC104443966 i... 118 6e-30
KYP31853.1 Retrovirus-related Pol polyprotein from transposon TN... 126 7e-30
KYP49408.1 Retrovirus-related Pol polyprotein from transposon TN... 123 1e-29
KYP48756.1 Retrovirus-related Pol polyprotein from transposon TN... 120 1e-29
XP_017701722.1 PREDICTED: LOW QUALITY PROTEIN: glutamine--tRNA l... 124 3e-29
KYP65432.1 Retrovirus-related Pol polyprotein from transposon TN... 118 8e-29
KYP53895.1 Retrovirus-related Pol polyprotein from transposon TN... 122 8e-29
CAN65406.1 hypothetical protein VITISV_030853 [Vitis vinifera] 122 1e-28
AAR96002.1 retrotransposon-like protein [Musa acuminata] 121 2e-28
KYP73281.1 Retrovirus-related Pol polyprotein from transposon TN... 118 2e-28
>KYP76811.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1305
Score = 135 bits (341), Expect = 4e-33
Identities = 63/109 (57%), Positives = 81/109 (74%)
Frame = -2
Query: 664 ASFHATSCGEIFTSYISGDFGYVRMGNGSASKVIGIGDIYLKTNNGSMLMFREIKHVPDI 485
ASFH T G F+SY SGDFG V+MGN SK++GIGDI L T+ G L+ ++++HVP +
Sbjct: 285 ASFHVTPHGSFFSSYQSGDFGTVQMGNQDRSKIVGIGDIILTTSTGCRLVLKDVRHVPAM 344
Query: 484 RLNLMSTGKLDENGYSIFFGEGKWKLTKGSLVVTRGKKVGDFYTIQVRV 338
RLNL+S GKLD+ G +FGEGKWKLTKGSLV+ RGKK G Y +Q ++
Sbjct: 345 RLNLISAGKLDDAGLMNYFGEGKWKLTKGSLVMARGKKEGSLYVMQAKL 393
>KYP76810.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1305
Score = 135 bits (341), Expect = 4e-33
Identities = 63/109 (57%), Positives = 81/109 (74%)
Frame = -2
Query: 664 ASFHATSCGEIFTSYISGDFGYVRMGNGSASKVIGIGDIYLKTNNGSMLMFREIKHVPDI 485
ASFH T G F+SY SGDFG V+MGN SK++GIGDI L T+ G L+ ++++HVP +
Sbjct: 285 ASFHVTPHGSFFSSYQSGDFGTVQMGNQDRSKIVGIGDIILTTSTGCRLVLKDVRHVPAM 344
Query: 484 RLNLMSTGKLDENGYSIFFGEGKWKLTKGSLVVTRGKKVGDFYTIQVRV 338
RLNL+S GKLD+ G +FGEGKWKLTKGSLV+ RGKK G Y +Q ++
Sbjct: 345 RLNLISAGKLDDAGLMNYFGEGKWKLTKGSLVMARGKKEGSLYVMQAKL 393
>CAN75440.1 hypothetical protein VITISV_007304 [Vitis vinifera]
Length = 1362
Score = 132 bits (332), Expect = 7e-32
Identities = 59/109 (54%), Positives = 81/109 (74%)
Frame = -2
Query: 664 ASFHATSCGEIFTSYISGDFGYVRMGNGSASKVIGIGDIYLKTNNGSMLMFREIKHVPDI 485
AS HAT + FTSY SGDFG VRMGN ++K IG+GD+ L+T+NG+ML + +KH+PDI
Sbjct: 277 ASIHATPQKDFFTSYTSGDFGSVRMGNDGSAKAIGMGDVRLETSNGTMLTLKNVKHIPDI 336
Query: 484 RLNLMSTGKLDENGYSIFFGEGKWKLTKGSLVVTRGKKVGDFYTIQVRV 338
R+NL+STGKLD+ G+ F + +WKLT+GS+V+ +G K Y +Q RV
Sbjct: 337 RMNLISTGKLDDEGFCNTFRDSQWKLTRGSMVIAKGNKSSSLYLMQARV 385
>KYP31799.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 294
Score = 126 bits (316), Expect = 1e-31
Identities = 58/103 (56%), Positives = 71/103 (68%)
Frame = -2
Query: 664 ASFHATSCGEIFTSYISGDFGYVRMGNGSASKVIGIGDIYLKTNNGSMLMFREIKHVPDI 485
A+ H T E FTSY SGDFG ++MGN SKVIG+GD++L+TN G L+ R +KH PD+
Sbjct: 72 ATLHVTPRKEFFTSYTSGDFGVLKMGNDDVSKVIGVGDVFLQTNMGMQLLLRVVKHAPDV 131
Query: 484 RLNLMSTGKLDENGYSIFFGEGKWKLTKGSLVVTRGKKVGDFY 356
R NL+ LD+ GY FG GKWKLTKG+LVV RGKK Y
Sbjct: 132 RFNLIFVQMLDDGGYDNHFGSGKWKLTKGNLVVARGKKNSKLY 174
>AAV88069.1 hypothetical retrotransposon [Ipomoea batatas]
Length = 1415
Score = 131 bits (329), Expect = 2e-31
Identities = 60/109 (55%), Positives = 79/109 (72%)
Frame = -2
Query: 664 ASFHATSCGEIFTSYISGDFGYVRMGNGSASKVIGIGDIYLKTNNGSMLMFREIKHVPDI 485
A++H T E FTSY GDFG +RMGN KV G G + L+T+NG+ L+ + +KH PDI
Sbjct: 295 AAYHVTPRKEFFTSYTPGDFGELRMGNDGQVKVTGTGTVCLETSNGTKLVLKNVKHAPDI 354
Query: 484 RLNLMSTGKLDENGYSIFFGEGKWKLTKGSLVVTRGKKVGDFYTIQVRV 338
RLNL+STGKLD++G+ FFG+G WK+TKGSLVV RG K + Y++Q V
Sbjct: 355 RLNLISTGKLDDDGFCCFFGDGHWKITKGSLVVARGNKSSNLYSLQSSV 403
>CAN74160.1 hypothetical protein VITISV_018405 [Vitis vinifera]
Length = 1302
Score = 130 bits (327), Expect = 3e-31
Identities = 58/109 (53%), Positives = 80/109 (73%)
Frame = -2
Query: 664 ASFHATSCGEIFTSYISGDFGYVRMGNGSASKVIGIGDIYLKTNNGSMLMFREIKHVPDI 485
AS HAT + FTSY SGDFG VRMGN ++K IG+GD+ L+T+NG+ML + +KH+PDI
Sbjct: 164 ASIHATPRKDFFTSYTSGDFGSVRMGNDGSAKAIGMGDVRLETSNGTMLTLKNVKHIPDI 223
Query: 484 RLNLMSTGKLDENGYSIFFGEGKWKLTKGSLVVTRGKKVGDFYTIQVRV 338
R+NL+STGKLD+ G+ F + +WKLT+GS+ + +G K Y +Q RV
Sbjct: 224 RMNLISTGKLDDEGFXNTFRDSQWKLTRGSMXIAKGNKSSSLYLMQARV 272
>KYP49350.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 178
Score = 121 bits (304), Expect = 4e-31
Identities = 57/98 (58%), Positives = 70/98 (71%)
Frame = -2
Query: 664 ASFHATSCGEIFTSYISGDFGYVRMGNGSASKVIGIGDIYLKTNNGSMLMFREIKHVPDI 485
A+ H T E FTSY SGDFG ++M N SKVIG+GD+ L+TN G L+ R +KHVPD+
Sbjct: 10 ATLHVTPRKEFFTSYTSGDFGVLKMDNDGVSKVIGVGDVCLQTNMGMQLLLRGVKHVPDV 69
Query: 484 RLNLMSTGKLDENGYSIFFGEGKWKLTKGSLVVTRGKK 371
R NL+S LD+ GY FG GKWKLTKG+LVV RG+K
Sbjct: 70 RFNLISMQILDDGGYDNHFGSGKWKLTKGNLVVARGEK 107
>CAN70827.1 hypothetical protein VITISV_029099 [Vitis vinifera]
Length = 649
Score = 127 bits (319), Expect = 3e-30
Identities = 56/106 (52%), Positives = 79/106 (74%)
Frame = -2
Query: 664 ASFHATSCGEIFTSYISGDFGYVRMGNGSASKVIGIGDIYLKTNNGSMLMFREIKHVPDI 485
AS HAT + FTSY SGDFG VRMGN ++K IG+GD++L+T+NG +L+ + +KH+PDI
Sbjct: 253 ASIHATPRKDFFTSYTSGDFGSVRMGNDGSAKAIGMGDVHLETSNGIVLILKNVKHIPDI 312
Query: 484 RLNLMSTGKLDENGYSIFFGEGKWKLTKGSLVVTRGKKVGDFYTIQ 347
+NL+STGKLD G+ F + +WKLT+GS+V+ +GKK Y +Q
Sbjct: 313 SMNLISTGKLDNEGFCNTFRDSQWKLTRGSMVIAKGKKCSSLYFMQ 358
>KYP60296.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 990
Score = 127 bits (320), Expect = 3e-30
Identities = 59/103 (57%), Positives = 73/103 (70%)
Frame = -2
Query: 664 ASFHATSCGEIFTSYISGDFGYVRMGNGSASKVIGIGDIYLKTNNGSMLMFREIKHVPDI 485
A+ H T E FTSY SGDFG ++MGN SKVIG+GD++L+TN G L+ R +KHVPD+
Sbjct: 212 ATLHVTPRKEFFTSYTSGDFGVLKMGNDGVSKVIGVGDVFLQTNMGMQLLLRGVKHVPDV 271
Query: 484 RLNLMSTGKLDENGYSIFFGEGKWKLTKGSLVVTRGKKVGDFY 356
R NL+S LD+ GY FG GKWKLTKG+LVV RG+K Y
Sbjct: 272 RFNLISVQILDDGGYDNHFGSGKWKLTKGNLVVARGEKNSKLY 314
Score = 59.7 bits (143), Expect = 8e-07
Identities = 35/82 (42%), Positives = 50/82 (60%), Gaps = 12/82 (14%)
Frame = -3
Query: 318 ELGQKKMWYKAMQDGRKALHKNHE---------KKALHFKWVPKVKKESDSSQPKYKA-- 172
E +K+ W AMQD K+LH NH K+AL +W+ +VK+ES+S+ P+YKA
Sbjct: 739 ESEEKQQWLDAMQDEMKSLHDNHTYDLVKLPKGKRALENRWIFRVKQESNSTSPRYKARL 798
Query: 171 VVKEFDKQKSVKF-ELDPPIKK 109
VVK F ++K V F E+ P+ K
Sbjct: 799 VVKGFRQRKGVDFNEIFSPVVK 820
>KYP53808.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 464
Score = 125 bits (314), Expect = 4e-30
Identities = 57/103 (55%), Positives = 73/103 (70%)
Frame = -2
Query: 664 ASFHATSCGEIFTSYISGDFGYVRMGNGSASKVIGIGDIYLKTNNGSMLMFREIKHVPDI 485
A+ H TS E FTSY SGDFG ++MGN SKVIG+GD+ L+TN G L+ + +KHVPD+
Sbjct: 201 ATLHVTSRKEFFTSYTSGDFGVLKMGNDGVSKVIGVGDVCLQTNMGMQLLLKGVKHVPDV 260
Query: 484 RLNLMSTGKLDENGYSIFFGEGKWKLTKGSLVVTRGKKVGDFY 356
R NL+S LD+ GY FG GKWKLTKG+L+V +G+K Y
Sbjct: 261 RFNLISVQVLDDGGYDNHFGSGKWKLTKGNLIVAKGEKNSKLY 303
>XP_018729801.1 PREDICTED: uncharacterized protein LOC104443966 isoform X1
[Eucalyptus grandis] XP_018729802.1 PREDICTED:
uncharacterized protein LOC104443966 isoform X1
[Eucalyptus grandis]
Length = 169
Score = 118 bits (295), Expect = 6e-30
Identities = 54/107 (50%), Positives = 71/107 (66%)
Frame = -2
Query: 664 ASFHATSCGEIFTSYISGDFGYVRMGNGSASKVIGIGDIYLKTNNGSMLMFREIKHVPDI 485
ASFH TS +IF Y SGDFG V MGNG A ++IG G + +K G L E +H+PD+
Sbjct: 24 ASFHCTSQRDIFDDYTSGDFGQVSMGNGHACEIIGKGTVTVKIPGGGSLRLNETRHIPDL 83
Query: 484 RLNLMSTGKLDENGYSIFFGEGKWKLTKGSLVVTRGKKVGDFYTIQV 344
+ N++ST LDE GY FG G+WK+T G V+ RGK+VG FY +Q+
Sbjct: 84 KANVISTSALDEEGYGTIFGCGEWKITLGEEVIARGKRVGKFYRLQM 130
>KYP31853.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1314
Score = 126 bits (317), Expect = 7e-30
Identities = 59/109 (54%), Positives = 78/109 (71%)
Frame = -2
Query: 664 ASFHATSCGEIFTSYISGDFGYVRMGNGSASKVIGIGDIYLKTNNGSMLMFREIKHVPDI 485
ASFH T E F+SY GDFG V+MGN SK++GIG+I L T NG+ LM +E++HVPD+
Sbjct: 295 ASFHVTPHEEFFSSYQKGDFGMVKMGNHVTSKIVGIGEIALMTENGNKLMLKEVRHVPDM 354
Query: 484 RLNLMSTGKLDENGYSIFFGEGKWKLTKGSLVVTRGKKVGDFYTIQVRV 338
RLNL+S KLDE G F +WKL++GS++V RGKK G YT+Q ++
Sbjct: 355 RLNLISVSKLDEAGMINQFSADRWKLSRGSMIVARGKKEGSLYTMQGKI 403
>KYP49408.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 414
Score = 123 bits (309), Expect = 1e-29
Identities = 57/103 (55%), Positives = 72/103 (69%)
Frame = -2
Query: 664 ASFHATSCGEIFTSYISGDFGYVRMGNGSASKVIGIGDIYLKTNNGSMLMFREIKHVPDI 485
A+ H TS E FTSY GDFG ++MGN SKVIG+GD+ L+TN G L+ R +KHVPD+
Sbjct: 201 ATLHVTSRKEFFTSYTPGDFGVLKMGNDGVSKVIGVGDVCLQTNMGMQLLLRGVKHVPDV 260
Query: 484 RLNLMSTGKLDENGYSIFFGEGKWKLTKGSLVVTRGKKVGDFY 356
R NL+S LD+ GY FG GKWKLTKG+L+V +G+K Y
Sbjct: 261 RFNLISMQVLDDGGYDNQFGSGKWKLTKGNLIVAKGEKNSKLY 303
>KYP48756.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 285
Score = 120 bits (302), Expect = 1e-29
Identities = 56/103 (54%), Positives = 70/103 (67%)
Frame = -2
Query: 664 ASFHATSCGEIFTSYISGDFGYVRMGNGSASKVIGIGDIYLKTNNGSMLMFREIKHVPDI 485
A+ H T E FTSY SGDFG ++M N SKVIG+GD+ L+TN G L+ R +KH PD+
Sbjct: 8 ATLHVTPRKEFFTSYTSGDFGVLKMSNDGVSKVIGVGDVCLQTNMGMQLLLRGVKHAPDV 67
Query: 484 RLNLMSTGKLDENGYSIFFGEGKWKLTKGSLVVTRGKKVGDFY 356
R NL+S LD+ GY FG GKWKLTKG+LVV +G+K Y
Sbjct: 68 RFNLISVQILDDGGYDNHFGSGKWKLTKGNLVVAKGEKNSKLY 110
>XP_017701722.1 PREDICTED: LOW QUALITY PROTEIN: glutamine--tRNA ligase-like
[Phoenix dactylifera]
Length = 926
Score = 124 bits (312), Expect = 3e-29
Identities = 56/95 (58%), Positives = 74/95 (77%)
Frame = -2
Query: 664 ASFHATSCGEIFTSYISGDFGYVRMGNGSASKVIGIGDIYLKTNNGSMLMFREIKHVPDI 485
ASFH TS + F Y GDFG+VRMGN S+++G+G+I LKTN G L+ ++++HVPDI
Sbjct: 651 ASFHVTSRADFFNFYTKGDFGHVRMGNEGVSQIVGMGNICLKTNVGCKLLLKDVRHVPDI 710
Query: 484 RLNLMSTGKLDENGYSIFFGEGKWKLTKGSLVVTR 380
RLNL+STGKLD+ GY+ FG+GKWK++K SLVV R
Sbjct: 711 RLNLISTGKLDDEGYNNQFGDGKWKMSKSSLVVAR 745
>KYP65432.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan] KYP65440.1 Retrovirus-related Pol
polyprotein from transposon TNT 1-94 [Cajanus cajan]
Length = 284
Score = 118 bits (296), Expect = 8e-29
Identities = 56/103 (54%), Positives = 70/103 (67%)
Frame = -2
Query: 664 ASFHATSCGEIFTSYISGDFGYVRMGNGSASKVIGIGDIYLKTNNGSMLMFREIKHVPDI 485
A+ H S E FTSY SGDFG ++MGN SKVIG+GD+ L+TN G L+ R +KH P++
Sbjct: 8 ATLHVISRKEFFTSYTSGDFGVLKMGNDGVSKVIGVGDVCLQTNMGMQLLLRGVKHAPNV 67
Query: 484 RLNLMSTGKLDENGYSIFFGEGKWKLTKGSLVVTRGKKVGDFY 356
R NL+S LD+ GY FG GKWKLTKG+LVV R +K Y
Sbjct: 68 RFNLISMQILDDGGYDNHFGSGKWKLTKGNLVVARWEKNSKLY 110
>KYP53895.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 556
Score = 122 bits (307), Expect = 8e-29
Identities = 57/103 (55%), Positives = 72/103 (69%)
Frame = -2
Query: 664 ASFHATSCGEIFTSYISGDFGYVRMGNGSASKVIGIGDIYLKTNNGSMLMFREIKHVPDI 485
A+ H TS E+FTSY GDFG ++MGN SKVIG+GDI L+TN L+ R +KHVPD+
Sbjct: 294 ATLHVTSRKELFTSYTPGDFGVLKMGNDGVSKVIGVGDICLQTNMRMQLLLRGVKHVPDV 353
Query: 484 RLNLMSTGKLDENGYSIFFGEGKWKLTKGSLVVTRGKKVGDFY 356
R NL+S LD+ GY FG GKWKLTKG+L+V +G+K Y
Sbjct: 354 RFNLISVQVLDDGGYDNHFGSGKWKLTKGNLIVAKGEKNSKLY 396
>CAN65406.1 hypothetical protein VITISV_030853 [Vitis vinifera]
Length = 1017
Score = 122 bits (307), Expect = 1e-28
Identities = 57/109 (52%), Positives = 77/109 (70%)
Frame = -2
Query: 664 ASFHATSCGEIFTSYISGDFGYVRMGNGSASKVIGIGDIYLKTNNGSMLMFREIKHVPDI 485
AS HAT + FTSY DFG VRMGN +K IG+GD+ L+T+NG+ML + +KH+PDI
Sbjct: 51 ASIHATPRKDFFTSYTFSDFGSVRMGNDGLAKAIGMGDVRLETSNGTMLTLKNVKHIPDI 110
Query: 484 RLNLMSTGKLDENGYSIFFGEGKWKLTKGSLVVTRGKKVGDFYTIQVRV 338
R+NL+ST KLD+ G F + +WKLT+GS+V+T+ K Y +QVRV
Sbjct: 111 RMNLISTRKLDDEGLCNTFRDSQWKLTRGSMVITKENKSSSLYLMQVRV 159
>AAR96002.1 retrotransposon-like protein [Musa acuminata]
Length = 521
Score = 121 bits (304), Expect = 2e-28
Identities = 55/127 (43%), Positives = 86/127 (67%)
Frame = -2
Query: 658 FHATSCGEIFTSYISGDFGYVRMGNGSASKVIGIGDIYLKTNNGSMLMFREIKHVPDIRL 479
FH TS G+ F SY GDFG VRMGN K++GIGDI L+T+ GS L+ +++++VP+I L
Sbjct: 204 FHVTSHGDFFRSYTVGDFGNVRMGNNGTYKIMGIGDICLETSIGSKLILKDVRYVPNICL 263
Query: 478 NLMSTGKLDENGYSIFFGEGKWKLTKGSLVVTRGKKVGDFYTIQVRVEGVKDGGVRPKKD 299
NL+ST +L++ ++ +F E KWKLTKGSL++ RG K+ FY ++ ++ + ++ +
Sbjct: 264 NLISTSRLNDEDFAHYFDESKWKLTKGSLIMARGNKLNSFYVLEAKLHKGEINAIQKGES 323
Query: 298 VVQSHAR 278
+ H R
Sbjct: 324 IDLWHKR 330
>KYP73281.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 321
Score = 118 bits (296), Expect = 2e-28
Identities = 52/103 (50%), Positives = 70/103 (67%)
Frame = -2
Query: 664 ASFHATSCGEIFTSYISGDFGYVRMGNGSASKVIGIGDIYLKTNNGSMLMFREIKHVPDI 485
A+ H T+ E FTSY GDFG +++GN SKVIG+GD+ L+TN G L+ R + H PD+
Sbjct: 166 ATLHVTTRKEFFTSYTFGDFGVLKIGNDGVSKVIGVGDVCLQTNMGMQLLLRRVNHAPDV 225
Query: 484 RLNLMSTGKLDENGYSIFFGEGKWKLTKGSLVVTRGKKVGDFY 356
NL+S L++ GY FG GKWKLTKG+LVV +G+K+ Y
Sbjct: 226 HFNLISVQILEDGGYDTHFGSGKWKLTKGNLVVAKGEKISKLY 268