BLASTX nr result
ID: Panax25_contig00031339
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax25_contig00031339
(379 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CBJ20667.1 hypothetical protein (mitochondrion) [Beta vulgaris s... 89 3e-20
BAD66725.1 orf143 (mitochondrion) [Beta vulgaris subsp. vulgaris... 89 4e-20
KYP63121.1 Retrovirus-related Pol polyprotein from transposon TN... 91 2e-19
BAT87454.1 hypothetical protein VIGAN_05082100 [Vigna angularis ... 85 4e-19
KYP63123.1 Retrovirus-related Pol polyprotein from transposon TN... 84 8e-19
KYP76810.1 Retrovirus-related Pol polyprotein from transposon TN... 91 9e-19
KYP76811.1 Retrovirus-related Pol polyprotein from transposon TN... 91 1e-18
XP_013589266.1 PREDICTED: uncharacterized protein LOC106297605 [... 87 1e-17
XP_017609491.1 PREDICTED: retrovirus-related Pol polyprotein fro... 84 2e-16
AAV88069.1 hypothetical retrotransposon [Ipomoea batatas] 82 1e-15
JAV00964.1 Retrovirus-related Pol polyprotein from transposon TN... 76 1e-15
KMT10093.1 hypothetical protein BVRB_5g118560 [Beta vulgaris sub... 80 5e-15
BAA11674.1 unnamed protein product [Nicotiana tabacum] 79 9e-15
CAN71391.1 hypothetical protein VITISV_038145 [Vitis vinifera] 79 1e-14
KYP31853.1 Retrovirus-related Pol polyprotein from transposon TN... 79 1e-14
CAN75440.1 hypothetical protein VITISV_007304 [Vitis vinifera] 78 2e-14
KFK32108.1 hypothetical protein AALP_AA6G199700 [Arabis alpina] 78 2e-14
KYP59393.1 Retrovirus-related Pol polyprotein from transposon TN... 72 3e-14
KYP52469.1 Retrovirus-related Pol polyprotein from transposon TN... 72 4e-14
CAN77602.1 hypothetical protein VITISV_024474 [Vitis vinifera] 77 4e-14
>CBJ20667.1 hypothetical protein (mitochondrion) [Beta vulgaris subsp.
maritima] CBL52021.1 hypothetical protein
(mitochondrion) [Beta vulgaris subsp. maritima]
Length = 128
Score = 89.0 bits (219), Expect = 3e-20
Identities = 39/58 (67%), Positives = 49/58 (84%)
Frame = +1
Query: 1 REVRHVPDIRLNLISAGKLDENGYKSYFGEGQWKLTKGSLVVTRGKKVGALYTMQARV 174
R+VRHVPD+R+NLISAGK D++GY S+FGEG+WKL KGSLVV RGKK + MQA++
Sbjct: 35 RDVRHVPDVRVNLISAGKFDDDGYASHFGEGRWKLAKGSLVVARGKKENGCFVMQAKL 92
>BAD66725.1 orf143 (mitochondrion) [Beta vulgaris subsp. vulgaris] BAD66769.1
orf143 (mitochondrion) [Beta vulgaris subsp. vulgaris]
CBL52020.1 hypothetical protein (mitochondrion) [Beta
vulgaris subsp. maritima]
Length = 143
Score = 89.0 bits (219), Expect = 4e-20
Identities = 39/58 (67%), Positives = 49/58 (84%)
Frame = +1
Query: 1 REVRHVPDIRLNLISAGKLDENGYKSYFGEGQWKLTKGSLVVTRGKKVGALYTMQARV 174
R+VRHVPD+R+NLISAGK D++GY S+FGEG+WKL KGSLVV RGKK + MQA++
Sbjct: 50 RDVRHVPDVRVNLISAGKFDDDGYASHFGEGRWKLAKGSLVVARGKKENGCFVMQAKL 107
>KYP63121.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 344
Score = 91.3 bits (225), Expect = 2e-19
Identities = 47/86 (54%), Positives = 62/86 (72%), Gaps = 2/86 (2%)
Frame = +1
Query: 1 REVRHVPDIRLNLISAGKLDENGYKSYFGEGQWKLTKGSLVVTRGKKVGALYTMQARV-E 177
++VRHVP +RLNLISAGKLD+ G +YFGEG+WKLTKGSLV+ RGKK G+LY MQA++ +
Sbjct: 28 KDVRHVPAMRLNLISAGKLDDAGLMNYFGEGKWKLTKGSLVIARGKKEGSLYVMQAKLCK 87
Query: 178 GVKDGGVRRKRMWYKAM-QDGRKALH 252
G + +W+K + K LH
Sbjct: 88 GEVNITTDDIEVWHKRLGHISEKGLH 113
>BAT87454.1 hypothetical protein VIGAN_05082100 [Vigna angularis var.
angularis]
Length = 88
Score = 84.7 bits (208), Expect = 4e-19
Identities = 36/58 (62%), Positives = 49/58 (84%)
Frame = +1
Query: 1 REVRHVPDIRLNLISAGKLDENGYKSYFGEGQWKLTKGSLVVTRGKKVGALYTMQARV 174
+EVRHVP+IRLNLIS GKLD+ G + FG+G+WKL++GS++V RGKK G+LY MQ ++
Sbjct: 28 KEVRHVPEIRLNLISVGKLDDAGMNNQFGDGKWKLSRGSMIVARGKKEGSLYCMQGKI 85
>KYP63123.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 99
Score = 84.3 bits (207), Expect = 8e-19
Identities = 38/58 (65%), Positives = 49/58 (84%)
Frame = +1
Query: 1 REVRHVPDIRLNLISAGKLDENGYKSYFGEGQWKLTKGSLVVTRGKKVGALYTMQARV 174
++VRHVP +RLNLIS GKLD+ G +YFG+G+WKL KGSLV+ RGKK G+LY MQA++
Sbjct: 28 KDVRHVPAMRLNLISIGKLDDAGLMNYFGDGKWKLGKGSLVMARGKKEGSLYVMQAKL 85
>KYP76810.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1305
Score = 90.9 bits (224), Expect = 9e-19
Identities = 47/86 (54%), Positives = 62/86 (72%), Gaps = 2/86 (2%)
Frame = +1
Query: 1 REVRHVPDIRLNLISAGKLDENGYKSYFGEGQWKLTKGSLVVTRGKKVGALYTMQARV-E 177
++VRHVP +RLNLISAGKLD+ G +YFGEG+WKLTKGSLV+ RGKK G+LY MQA++ +
Sbjct: 336 KDVRHVPAMRLNLISAGKLDDAGLMNYFGEGKWKLTKGSLVMARGKKEGSLYVMQAKLCK 395
Query: 178 GVKDGGVRRKRMWYKAM-QDGRKALH 252
G + +W+K + K LH
Sbjct: 396 GEVNITTDDLEVWHKRLGHISEKGLH 421
Score = 58.2 bits (139), Expect = 2e-07
Identities = 34/83 (40%), Positives = 49/83 (59%), Gaps = 11/83 (13%)
Frame = +1
Query: 163 QARVEGVKDGGVRRKRMWYKAMQDGRKALHENHE---------RKALHLKWVPKVKKESD 315
Q+ E +KD K W KAMQ+ ++LHENH R+AL KWV ++K E +
Sbjct: 787 QSYKEAIKD---IHKEEWRKAMQEEMQSLHENHTYELVELPKGRRALKNKWVYRIKTEDN 843
Query: 316 SSQPRYKA--VVKEFDKQKSVKF 378
+++PRYKA VVK F ++K + F
Sbjct: 844 NTKPRYKARLVVKGFGQEKGIDF 866
>KYP76811.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1305
Score = 90.5 bits (223), Expect = 1e-18
Identities = 47/86 (54%), Positives = 62/86 (72%), Gaps = 2/86 (2%)
Frame = +1
Query: 1 REVRHVPDIRLNLISAGKLDENGYKSYFGEGQWKLTKGSLVVTRGKKVGALYTMQARV-E 177
++VRHVP +RLNLISAGKLD+ G +YFGEG+WKLTKGSLV+ RGKK G+LY MQA++ +
Sbjct: 336 KDVRHVPAMRLNLISAGKLDDAGLMNYFGEGKWKLTKGSLVMARGKKEGSLYVMQAKLCK 395
Query: 178 GVKDGGVRRKRMWYKAM-QDGRKALH 252
G + +W+K + K LH
Sbjct: 396 GEVNITTDDIEVWHKRLGHISEKGLH 421
Score = 58.2 bits (139), Expect = 2e-07
Identities = 34/83 (40%), Positives = 49/83 (59%), Gaps = 11/83 (13%)
Frame = +1
Query: 163 QARVEGVKDGGVRRKRMWYKAMQDGRKALHENHE---------RKALHLKWVPKVKKESD 315
Q+ E +KD K W KAMQ+ ++LHENH R+AL KWV ++K E +
Sbjct: 787 QSYKEAIKD---IHKEEWRKAMQEEMQSLHENHTYELVELPKGRRALKNKWVYRIKTEDN 843
Query: 316 SSQPRYKA--VVKEFDKQKSVKF 378
+++PRYKA VVK F ++K + F
Sbjct: 844 NTKPRYKARLVVKGFGQEKGIDF 866
>XP_013589266.1 PREDICTED: uncharacterized protein LOC106297605 [Brassica oleracea
var. oleracea]
Length = 841
Score = 87.4 bits (215), Expect = 1e-17
Identities = 52/139 (37%), Positives = 76/139 (54%), Gaps = 23/139 (16%)
Frame = +1
Query: 31 LNLISAGKLDENGYKSYFGEGQWKLTKGSLVVTRGKKVGALYTMQARV------------ 174
+NLIS G+LD+ GY S G G+WKL++GSL+V RG+K + Y MQA+
Sbjct: 469 MNLISMGRLDDEGYFSLHGGGKWKLSRGSLIVARGEKSSSFYWMQAKETRGIGGEPESYD 528
Query: 175 EGVKDGGVRRKRMWYKAMQDGRKALHENHE---------RKALHLKWVPKVKKESDSSQP 327
E ++D K W+ AM + + ENH +KAL KWV K+K E D+ P
Sbjct: 529 EALED---EHKDKWFGAMDEEMDSFEENHTFELVELPKGKKALLNKWVYKIKHEDDNFPP 585
Query: 328 RYK--AVVKEFDKQKSVKF 378
R+K VVK + ++K + +
Sbjct: 586 RHKPRLVVKGYSQKKGIDY 604
>XP_017609491.1 PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
1-94 [Gossypium arboreum]
Length = 1184
Score = 84.3 bits (207), Expect = 2e-16
Identities = 40/55 (72%), Positives = 45/55 (81%)
Frame = +1
Query: 4 EVRHVPDIRLNLISAGKLDENGYKSYFGEGQWKLTKGSLVVTRGKKVGALYTMQA 168
+VRH PD+RLNLISAGKLD+ G+ + F EGQWKLTKGSLVV RGKK LY MQA
Sbjct: 242 DVRHEPDVRLNLISAGKLDDEGFCNTFSEGQWKLTKGSLVVARGKKSSNLYLMQA 296
>AAV88069.1 hypothetical retrotransposon [Ipomoea batatas]
Length = 1415
Score = 82.0 bits (201), Expect = 1e-15
Identities = 38/79 (48%), Positives = 54/79 (68%), Gaps = 3/79 (3%)
Frame = +1
Query: 1 REVRHVPDIRLNLISAGKLDENGYKSYFGEGQWKLTKGSLVVTRGKKVGALYTMQARVEG 180
+ V+H PDIRLNLIS GKLD++G+ +FG+G WK+TKGSLVV RG K LY++Q+ V
Sbjct: 346 KNVKHAPDIRLNLISTGKLDDDGFCCFFGDGHWKITKGSLVVARGNKSSNLYSLQSSVSD 405
Query: 181 VKDGGVRRK---RMWYKAM 228
V ++ +W+K +
Sbjct: 406 DSVNVVEKECASELWHKRL 424
>JAV00964.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Noccaea caerulescens]
Length = 103
Score = 76.3 bits (186), Expect = 1e-15
Identities = 33/56 (58%), Positives = 44/56 (78%)
Frame = +1
Query: 7 VRHVPDIRLNLISAGKLDENGYKSYFGEGQWKLTKGSLVVTRGKKVGALYTMQARV 174
V+HVPD+RLNLIS G+LD+ G+ S FG G+WKLT+GS+V+ RG K + Y M A+V
Sbjct: 28 VKHVPDVRLNLISTGRLDDEGFYSLFGGGKWKLTRGSMVMARGDKSASFYWMHAKV 83
>KMT10093.1 hypothetical protein BVRB_5g118560 [Beta vulgaris subsp. vulgaris]
Length = 993
Score = 80.1 bits (196), Expect = 5e-15
Identities = 38/58 (65%), Positives = 45/58 (77%)
Frame = +1
Query: 1 REVRHVPDIRLNLISAGKLDENGYKSYFGEGQWKLTKGSLVVTRGKKVGALYTMQARV 174
+ VRHVPDIRLNLIS GKLD+ G+ S F GQWKLTKGSLV+ RGKK +LY + A +
Sbjct: 831 KNVRHVPDIRLNLISTGKLDDEGFCSTFYSGQWKLTKGSLVLARGKKHTSLYLLHATI 888
>BAA11674.1 unnamed protein product [Nicotiana tabacum]
Length = 1338
Score = 79.3 bits (194), Expect = 9e-15
Identities = 38/58 (65%), Positives = 43/58 (74%)
Frame = +1
Query: 1 REVRHVPDIRLNLISAGKLDENGYKSYFGEGQWKLTKGSLVVTRGKKVGALYTMQARV 174
R+VRHVPD+RLNLIS KLDE GY + F GQWKLTKGSL+V RG K LY QA +
Sbjct: 349 RDVRHVPDMRLNLISVDKLDEEGYCNTFHNGQWKLTKGSLMVARGTKQSKLYVTQASI 406
>CAN71391.1 hypothetical protein VITISV_038145 [Vitis vinifera]
Length = 579
Score = 79.0 bits (193), Expect = 1e-14
Identities = 37/67 (55%), Positives = 51/67 (76%)
Frame = +1
Query: 1 REVRHVPDIRLNLISAGKLDENGYKSYFGEGQWKLTKGSLVVTRGKKVGALYTMQARVEG 180
++VRHVP +R +LIS GKLD+ GY S+ GEG+WK+TKGSLV+ RGKK LY ++ R+
Sbjct: 225 KDVRHVPXMRFSLISVGKLDDEGYHSHLGEGKWKITKGSLVLXRGKKNNTLYKIEVRL-- 282
Query: 181 VKDGGVR 201
VK G++
Sbjct: 283 VKGEGLQ 289
>KYP31853.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1314
Score = 79.0 bits (193), Expect = 1e-14
Identities = 35/58 (60%), Positives = 46/58 (79%)
Frame = +1
Query: 1 REVRHVPDIRLNLISAGKLDENGYKSYFGEGQWKLTKGSLVVTRGKKVGALYTMQARV 174
+EVRHVPD+RLNLIS KLDE G + F +WKL++GS++V RGKK G+LYTMQ ++
Sbjct: 346 KEVRHVPDMRLNLISVSKLDEAGMINQFSADRWKLSRGSMIVARGKKEGSLYTMQGKI 403
>CAN75440.1 hypothetical protein VITISV_007304 [Vitis vinifera]
Length = 1362
Score = 78.2 bits (191), Expect = 2e-14
Identities = 33/58 (56%), Positives = 46/58 (79%)
Frame = +1
Query: 1 REVRHVPDIRLNLISAGKLDENGYKSYFGEGQWKLTKGSLVVTRGKKVGALYTMQARV 174
+ V+H+PDIR+NLIS GKLD+ G+ + F + QWKLT+GS+V+ +G K +LY MQARV
Sbjct: 328 KNVKHIPDIRMNLISTGKLDDEGFCNTFRDSQWKLTRGSMVIAKGNKSSSLYLMQARV 385
>KFK32108.1 hypothetical protein AALP_AA6G199700 [Arabis alpina]
Length = 1415
Score = 78.2 bits (191), Expect = 2e-14
Identities = 36/56 (64%), Positives = 44/56 (78%)
Frame = +1
Query: 7 VRHVPDIRLNLISAGKLDENGYKSYFGEGQWKLTKGSLVVTRGKKVGALYTMQARV 174
V+HVPDIRLNLIS GKLD+ G+ S FG G+WKLT+GS+V+ RG K Y MQA+V
Sbjct: 112 VKHVPDIRLNLISTGKLDDEGFYSLFGGGKWKLTRGSMVMARGDKHSFFYWMQAKV 167
>KYP59393.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan] KYP59401.1 Retrovirus-related Pol
polyprotein from transposon TNT 1-94 [Cajanus cajan]
Length = 88
Score = 72.4 bits (176), Expect = 3e-14
Identities = 31/58 (53%), Positives = 45/58 (77%)
Frame = +1
Query: 1 REVRHVPDIRLNLISAGKLDENGYKSYFGEGQWKLTKGSLVVTRGKKVGALYTMQARV 174
+ VRH+PD+RLNLIS +LDE+GY + FG G+WK TK +LV+T+G+K LY + A++
Sbjct: 28 KNVRHIPDMRLNLISIQELDEDGYHNSFGNGKWKCTKWTLVITKGEKQNTLYWISAKL 85
>KYP52469.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 99
Score = 72.4 bits (176), Expect = 4e-14
Identities = 33/58 (56%), Positives = 42/58 (72%)
Frame = +1
Query: 1 REVRHVPDIRLNLISAGKLDENGYKSYFGEGQWKLTKGSLVVTRGKKVGALYTMQARV 174
R V+H PD+R NLIS LD+ GY ++FG G+WKLTKG+LVV RG+K LY +A V
Sbjct: 28 RGVKHAPDVRFNLISVQMLDDGGYDNHFGSGKWKLTKGNLVVARGEKNSKLYWTKALV 85
>CAN77602.1 hypothetical protein VITISV_024474 [Vitis vinifera]
Length = 1207
Score = 77.4 bits (189), Expect = 4e-14
Identities = 32/58 (55%), Positives = 45/58 (77%)
Frame = +1
Query: 1 REVRHVPDIRLNLISAGKLDENGYKSYFGEGQWKLTKGSLVVTRGKKVGALYTMQARV 174
+ V+H+PDIR+NLIS GKLD+ G+ + F + QWKLT+GS+V+ +G K +LY MQ RV
Sbjct: 231 KNVKHIPDIRMNLISTGKLDDEGFYNIFRDSQWKLTRGSMVIAKGNKSSSLYLMQTRV 288
Score = 59.3 bits (142), Expect = 1e-07
Identities = 34/83 (40%), Positives = 50/83 (60%), Gaps = 11/83 (13%)
Frame = +1
Query: 163 QARVEGVKDGGVRRKRMWYKAMQDGRKALHENHE---------RKALHLKWVPKVKKESD 315
++ VE ++D K W AMQD ++LHENH ++AL +WV +VK+E
Sbjct: 711 ESYVEAMED---ENKMKWVDAMQDEMESLHENHSFELVKLPKGKRALKNRWVYRVKQEEH 767
Query: 316 SSQPRYKA--VVKEFDKQKSVKF 378
+SQPRYKA VVK F+++K + F
Sbjct: 768 TSQPRYKARLVVKGFNQKKGIDF 790