BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00031243
         (409 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_002282614.1 PREDICTED: RNA pseudouridine synthase 4, mitochon...   124   4e-39
XP_017230138.1 PREDICTED: RNA pseudouridine synthase 4, mitochon...   120   7e-38
KVI01889.1 Pseudouridine synthase, catalytic domain-containing p...   125   1e-34
XP_010271251.1 PREDICTED: RNA pseudouridine synthase 4, mitochon...   116   7e-34
XP_010271255.1 PREDICTED: RNA pseudouridine synthase 4, mitochon...   116   7e-34
XP_010271260.1 PREDICTED: RNA pseudouridine synthase 4, mitochon...   116   7e-34
XP_015892750.1 PREDICTED: RNA pseudouridine synthase 4, mitochon...   115   2e-33
XP_018827853.1 PREDICTED: RNA pseudouridine synthase 4, mitochon...   115   5e-33
GAV62308.1 PseudoU_synth_2 domain-containing protein [Cephalotus...   114   2e-32
XP_010096290.1 RNA pseudourine synthase 4 [Morus notabilis] EXB6...   111   7e-32
XP_015063320.1 PREDICTED: RNA pseudouridine synthase 4, mitochon...   122   9e-32
KHG26351.1 hypothetical protein F383_00972 [Gossypium arboreum]       114   1e-31
XP_017639587.1 PREDICTED: RNA pseudouridine synthase 4, mitochon...   114   1e-31
XP_012450617.1 PREDICTED: RNA pseudouridine synthase 4, mitochon...   114   1e-31
XP_006346360.2 PREDICTED: RNA pseudouridine synthase 4, mitochon...   122   1e-31
XP_002313876.2 hypothetical protein POPTR_0009s09860g [Populus t...   111   1e-31
KJB12281.1 hypothetical protein B456_002G009500 [Gossypium raimo...   114   1e-31
XP_004230733.2 PREDICTED: RNA pseudouridine synthase 4, mitochon...   122   1e-31
XP_011001172.1 PREDICTED: RNA pseudouridine synthase 4, mitochon...   110   1e-31
XP_011001179.1 PREDICTED: RNA pseudouridine synthase 4, mitochon...   110   1e-31

>XP_002282614.1 PREDICTED: RNA pseudouridine synthase 4, mitochondrial isoform X1
           [Vitis vinifera] CBI40257.3 unnamed protein product,
           partial [Vitis vinifera]
          Length = 476

 Score =  124 bits (312), Expect(2) = 4e-39
 Identities = 59/79 (74%), Positives = 68/79 (86%)
 Frame = +3

Query: 171 MEFGDRIFLPNTVQEFPSEKIEWRCNEEEQKFVHSLELYKDSAIIVLNKPPGMPVQGGIG 350
           M  GD+I LP TV+EFPSEK E+ CN+EE  FVH+LELYKD AIIV+NKPPG+PVQGGIG
Sbjct: 150 MNLGDQILLPITVEEFPSEKHEYHCNDEEINFVHNLELYKDPAIIVVNKPPGLPVQGGIG 209

Query: 351 IKRSLDELAGTYLKHDYSE 407
           IKRSLDELA TYL++D SE
Sbjct: 210 IKRSLDELAATYLRYDCSE 228



 Score = 64.3 bits (155), Expect(2) = 4e-39
 Identities = 31/39 (79%), Positives = 36/39 (92%)
 Frame = +2

Query: 2   LPRSLVQKLFRLRQVRRESFNISSSDVGVQAQERRVKRV 118
           LPRSLVQKLFRLRQVRRES+N+ +SD+GVQ QE R+KRV
Sbjct: 106 LPRSLVQKLFRLRQVRRESYNMITSDIGVQNQEHRLKRV 144


>XP_017230138.1 PREDICTED: RNA pseudouridine synthase 4, mitochondrial [Daucus
           carota subsp. sativus] KZN08989.1 hypothetical protein
           DCAR_001645 [Daucus carota subsp. sativus]
          Length = 453

 Score =  120 bits (300), Expect(2) = 7e-38
 Identities = 61/85 (71%), Positives = 69/85 (81%), Gaps = 6/85 (7%)
 Frame = +3

Query: 171 MEFGDRIFLPNTVQEFPS------EKIEWRCNEEEQKFVHSLELYKDSAIIVLNKPPGMP 332
           M++GD+IFLP TV+E  S      EK+E R NEEEQKFV SLELYKDSAIIV+NKP GMP
Sbjct: 123 MQYGDKIFLPKTVEELSSAKTEKAEKVEGRYNEEEQKFVQSLELYKDSAIIVVNKPHGMP 182

Query: 333 VQGGIGIKRSLDELAGTYLKHDYSE 407
           VQGG+GIKRSLDELAG YL+ D SE
Sbjct: 183 VQGGVGIKRSLDELAGAYLRQDNSE 207



 Score = 64.7 bits (156), Expect(2) = 7e-38
 Identities = 34/39 (87%), Positives = 35/39 (89%)
 Frame = +2

Query: 2   LPRSLVQKLFRLRQVRRESFNISSSDVGVQAQERRVKRV 118
           LPRSLVQKLFRLRQVRRES + SSSDVG  AQERRVKRV
Sbjct: 79  LPRSLVQKLFRLRQVRRESIDFSSSDVGGLAQERRVKRV 117


>KVI01889.1 Pseudouridine synthase, catalytic domain-containing protein [Cynara
           cardunculus var. scolymus]
          Length = 466

 Score =  125 bits (313), Expect(2) = 1e-34
 Identities = 58/80 (72%), Positives = 69/80 (86%)
 Frame = +3

Query: 168 TMEFGDRIFLPNTVQEFPSEKIEWRCNEEEQKFVHSLELYKDSAIIVLNKPPGMPVQGGI 347
           +M+ GD I+LP TVQ  P+EK+E  C+EEE KF+H L LYKDSAI+V+NKPPGMPVQGGI
Sbjct: 145 SMKCGDTIYLPITVQALPTEKVECLCSEEELKFLHDLVLYKDSAILVINKPPGMPVQGGI 204

Query: 348 GIKRSLDELAGTYLKHDYSE 407
           GIKRSLDELAG YL+HD+SE
Sbjct: 205 GIKRSLDELAGAYLRHDFSE 224



 Score = 48.9 bits (115), Expect(2) = 1e-34
 Identities = 27/39 (69%), Positives = 30/39 (76%)
 Frame = +2

Query: 2   LPRSLVQKLFRLRQVRRESFNISSSDVGVQAQERRVKRV 118
           LPRSLVQKLFRLRQVRR +   S+SD  VQA   R+KRV
Sbjct: 102 LPRSLVQKLFRLRQVRRGTSEGSNSDQDVQAPGCRIKRV 140


>XP_010271251.1 PREDICTED: RNA pseudouridine synthase 4, mitochondrial-like isoform
           X1 [Nelumbo nucifera]
          Length = 472

 Score =  116 bits (291), Expect(2) = 7e-34
 Identities = 57/79 (72%), Positives = 64/79 (81%)
 Frame = +3

Query: 171 MEFGDRIFLPNTVQEFPSEKIEWRCNEEEQKFVHSLELYKDSAIIVLNKPPGMPVQGGIG 350
           M  GDRIFLP TVQE PSE  E  CNE+E  ++ SLELYKD AII +NKP GMPVQGGIG
Sbjct: 150 MNLGDRIFLPITVQELPSETQEHYCNEDEISYICSLELYKDPAIIAVNKPHGMPVQGGIG 209

Query: 351 IKRSLDELAGTYLKHDYSE 407
           IK+SLDELA TYL++DYSE
Sbjct: 210 IKKSLDELAATYLRYDYSE 228



 Score = 54.7 bits (130), Expect(2) = 7e-34
 Identities = 30/40 (75%), Positives = 34/40 (85%), Gaps = 1/40 (2%)
 Frame = +2

Query: 2   LPRSLVQKLFRLRQVRRESF-NISSSDVGVQAQERRVKRV 118
           LPRSLVQKLFRLRQVRRES  ++SS D+G  AQE R+KRV
Sbjct: 105 LPRSLVQKLFRLRQVRRESCDSMSSLDIGNHAQEHRLKRV 144


>XP_010271255.1 PREDICTED: RNA pseudouridine synthase 4, mitochondrial-like isoform
           X2 [Nelumbo nucifera]
          Length = 440

 Score =  116 bits (291), Expect(2) = 7e-34
 Identities = 57/79 (72%), Positives = 64/79 (81%)
 Frame = +3

Query: 171 MEFGDRIFLPNTVQEFPSEKIEWRCNEEEQKFVHSLELYKDSAIIVLNKPPGMPVQGGIG 350
           M  GDRIFLP TVQE PSE  E  CNE+E  ++ SLELYKD AII +NKP GMPVQGGIG
Sbjct: 150 MNLGDRIFLPITVQELPSETQEHYCNEDEISYICSLELYKDPAIIAVNKPHGMPVQGGIG 209

Query: 351 IKRSLDELAGTYLKHDYSE 407
           IK+SLDELA TYL++DYSE
Sbjct: 210 IKKSLDELAATYLRYDYSE 228



 Score = 54.7 bits (130), Expect(2) = 7e-34
 Identities = 30/40 (75%), Positives = 34/40 (85%), Gaps = 1/40 (2%)
 Frame = +2

Query: 2   LPRSLVQKLFRLRQVRRESF-NISSSDVGVQAQERRVKRV 118
           LPRSLVQKLFRLRQVRRES  ++SS D+G  AQE R+KRV
Sbjct: 105 LPRSLVQKLFRLRQVRRESCDSMSSLDIGNHAQEHRLKRV 144


>XP_010271260.1 PREDICTED: RNA pseudouridine synthase 4, mitochondrial-like isoform
           X3 [Nelumbo nucifera]
          Length = 369

 Score =  116 bits (291), Expect(2) = 7e-34
 Identities = 57/79 (72%), Positives = 64/79 (81%)
 Frame = +3

Query: 171 MEFGDRIFLPNTVQEFPSEKIEWRCNEEEQKFVHSLELYKDSAIIVLNKPPGMPVQGGIG 350
           M  GDRIFLP TVQE PSE  E  CNE+E  ++ SLELYKD AII +NKP GMPVQGGIG
Sbjct: 150 MNLGDRIFLPITVQELPSETQEHYCNEDEISYICSLELYKDPAIIAVNKPHGMPVQGGIG 209

Query: 351 IKRSLDELAGTYLKHDYSE 407
           IK+SLDELA TYL++DYSE
Sbjct: 210 IKKSLDELAATYLRYDYSE 228



 Score = 54.7 bits (130), Expect(2) = 7e-34
 Identities = 30/40 (75%), Positives = 34/40 (85%), Gaps = 1/40 (2%)
 Frame = +2

Query: 2   LPRSLVQKLFRLRQVRRESF-NISSSDVGVQAQERRVKRV 118
           LPRSLVQKLFRLRQVRRES  ++SS D+G  AQE R+KRV
Sbjct: 105 LPRSLVQKLFRLRQVRRESCDSMSSLDIGNHAQEHRLKRV 144


>XP_015892750.1 PREDICTED: RNA pseudouridine synthase 4, mitochondrial [Ziziphus
           jujuba]
          Length = 486

 Score =  115 bits (288), Expect(2) = 2e-33
 Identities = 56/76 (73%), Positives = 63/76 (82%)
 Frame = +3

Query: 180 GDRIFLPNTVQEFPSEKIEWRCNEEEQKFVHSLELYKDSAIIVLNKPPGMPVQGGIGIKR 359
           GDRI+LP +VQEFP +K E+ CNEEE  F+ SLELYKD AIIV+NKPPGMPVQGGIGIKR
Sbjct: 165 GDRIYLPISVQEFPVDKKEYHCNEEEVSFIRSLELYKDPAIIVVNKPPGMPVQGGIGIKR 224

Query: 360 SLDELAGTYLKHDYSE 407
           SLDELA T L +D  E
Sbjct: 225 SLDELAATCLSYDCLE 240



 Score = 54.7 bits (130), Expect(2) = 2e-33
 Identities = 27/44 (61%), Positives = 36/44 (81%)
 Frame = +2

Query: 2   LPRSLVQKLFRLRQVRRESFNISSSDVGVQAQERRVKRVMHAYS 133
           LPRSLVQKLFRLRQVRRES +I  S++G + Q+ R++RV+  +S
Sbjct: 118 LPRSLVQKLFRLRQVRRESCDIGHSEMGDELQKPRLRRVITVFS 161


>XP_018827853.1 PREDICTED: RNA pseudouridine synthase 4, mitochondrial isoform X1
           [Juglans regia]
          Length = 476

 Score =  115 bits (288), Expect(2) = 5e-33
 Identities = 57/80 (71%), Positives = 64/80 (80%)
 Frame = +3

Query: 168 TMEFGDRIFLPNTVQEFPSEKIEWRCNEEEQKFVHSLELYKDSAIIVLNKPPGMPVQGGI 347
           +M  GDRIFLP TVQEFP EK +  CNEEE  FV SL LYKD AI+V+NKPPGMPVQGGI
Sbjct: 152 SMNVGDRIFLPITVQEFPFEKQDCHCNEEEANFVRSLVLYKDPAIVVVNKPPGMPVQGGI 211

Query: 348 GIKRSLDELAGTYLKHDYSE 407
           GIK+SLD LA T L ++YSE
Sbjct: 212 GIKQSLDGLAATCLTYNYSE 231



 Score = 53.1 bits (126), Expect(2) = 5e-33
 Identities = 31/56 (55%), Positives = 37/56 (66%)
 Frame = +2

Query: 2   LPRSLVQKLFRLRQVRRESFNISSSDVGVQAQERRVKRVMHAYSCLSRVKRVAAKD 169
           LPRSLVQKLFRLRQVRRES ++ S+ V  Q Q+ R            R+KRV+AKD
Sbjct: 108 LPRSLVQKLFRLRQVRRESNDVGSTCVDAQVQQER------------RLKRVSAKD 151


>GAV62308.1 PseudoU_synth_2 domain-containing protein [Cephalotus follicularis]
          Length = 467

 Score =  114 bits (286), Expect(2) = 2e-32
 Identities = 57/79 (72%), Positives = 63/79 (79%)
 Frame = +3

Query: 171 MEFGDRIFLPNTVQEFPSEKIEWRCNEEEQKFVHSLELYKDSAIIVLNKPPGMPVQGGIG 350
           +  GD+IFLP +VQE PSEK E  C EEE  FV SLELYKD AIIV+NKP GMPVQGG+G
Sbjct: 142 LNLGDQIFLPISVQELPSEKQECHCCEEEVNFVRSLELYKDPAIIVVNKPSGMPVQGGVG 201

Query: 351 IKRSLDELAGTYLKHDYSE 407
           IKRSLDELA T L +DYSE
Sbjct: 202 IKRSLDELAATCLSYDYSE 220



 Score = 51.6 bits (122), Expect(2) = 2e-32
 Identities = 27/39 (69%), Positives = 31/39 (79%)
 Frame = +2

Query: 2   LPRSLVQKLFRLRQVRRESFNISSSDVGVQAQERRVKRV 118
           LPRSLVQKLFRLRQVRR S +  SSD+G Q Q  ++KRV
Sbjct: 98  LPRSLVQKLFRLRQVRRGSADGGSSDLGAQGQAPQLKRV 136


>XP_010096290.1 RNA pseudourine synthase 4 [Morus notabilis] EXB63685.1 RNA
           pseudourine synthase 4 [Morus notabilis]
          Length = 470

 Score =  111 bits (278), Expect(2) = 7e-32
 Identities = 53/80 (66%), Positives = 65/80 (81%)
 Frame = +3

Query: 168 TMEFGDRIFLPNTVQEFPSEKIEWRCNEEEQKFVHSLELYKDSAIIVLNKPPGMPVQGGI 347
           ++  GD+IFLP +V+E P EK E  CNEEE KF+ SLELYKD AI+V+NKPPG+PVQGGI
Sbjct: 143 SLNLGDKIFLPISVKELPVEKKECFCNEEEVKFIRSLELYKDPAIVVVNKPPGLPVQGGI 202

Query: 348 GIKRSLDELAGTYLKHDYSE 407
           GIK SLD+LA T L +DY+E
Sbjct: 203 GIKTSLDQLAVTCLSYDYTE 222



 Score = 53.1 bits (126), Expect(2) = 7e-32
 Identities = 26/39 (66%), Positives = 31/39 (79%)
 Frame = +2

Query: 2   LPRSLVQKLFRLRQVRRESFNISSSDVGVQAQERRVKRV 118
           LPRSLVQKLFRLRQVRRESFN+   + G Q  + R++RV
Sbjct: 100 LPRSLVQKLFRLRQVRRESFNVEDCNAGDQLGKPRLRRV 138


>XP_015063320.1 PREDICTED: RNA pseudouridine synthase 4, mitochondrial [Solanum
           pennellii]
          Length = 478

 Score =  122 bits (307), Expect(2) = 9e-32
 Identities = 60/81 (74%), Positives = 70/81 (86%), Gaps = 1/81 (1%)
 Frame = +3

Query: 168 TMEFGDRIFLPNTVQEFPSEKIEWR-CNEEEQKFVHSLELYKDSAIIVLNKPPGMPVQGG 344
           +M  GDRIFLP TVQ+FPSEK+ +   +EEE+KFVHSLELYKD+ IIV+NKPPGMPVQGG
Sbjct: 150 SMNVGDRIFLPITVQKFPSEKVVYYPSSEEERKFVHSLELYKDAEIIVVNKPPGMPVQGG 209

Query: 345 IGIKRSLDELAGTYLKHDYSE 407
           IGIKRSLDELA  Y++H YSE
Sbjct: 210 IGIKRSLDELAAKYMRHQYSE 230



 Score = 41.6 bits (96), Expect(2) = 9e-32
 Identities = 23/39 (58%), Positives = 28/39 (71%)
 Frame = +2

Query: 2   LPRSLVQKLFRLRQVRRESFNISSSDVGVQAQERRVKRV 118
           LP+SLVQKLFRLRQVRR+S N+         +E+R KRV
Sbjct: 116 LPKSLVQKLFRLRQVRRDSSNV---------EEQRPKRV 145


>KHG26351.1 hypothetical protein F383_00972 [Gossypium arboreum]
          Length = 505

 Score =  114 bits (285), Expect(2) = 1e-31
 Identities = 54/80 (67%), Positives = 65/80 (81%)
 Frame = +3

Query: 168 TMEFGDRIFLPNTVQEFPSEKIEWRCNEEEQKFVHSLELYKDSAIIVLNKPPGMPVQGGI 347
           ++  GD+IFLP +V+E P EK E  C +EE  F+ SLELYKD+AIIVLNKPPGMPVQGGI
Sbjct: 151 SLNIGDKIFLPISVREVPEEKHEHDCTDEESNFIRSLELYKDTAIIVLNKPPGMPVQGGI 210

Query: 348 GIKRSLDELAGTYLKHDYSE 407
           GIK SLDELA  +L++DYSE
Sbjct: 211 GIKWSLDELAAAWLRYDYSE 230



 Score = 49.7 bits (117), Expect(2) = 1e-31
 Identities = 25/39 (64%), Positives = 31/39 (79%)
 Frame = +2

Query: 2   LPRSLVQKLFRLRQVRRESFNISSSDVGVQAQERRVKRV 118
           LPR+LVQKLFRLRQVRRES  +  +D G Q Q+ ++KRV
Sbjct: 108 LPRNLVQKLFRLRQVRRESIAMEVTDDGCQVQKIQLKRV 146


>XP_017639587.1 PREDICTED: RNA pseudouridine synthase 4, mitochondrial [Gossypium
           arboreum]
          Length = 479

 Score =  114 bits (285), Expect(2) = 1e-31
 Identities = 54/80 (67%), Positives = 65/80 (81%)
 Frame = +3

Query: 168 TMEFGDRIFLPNTVQEFPSEKIEWRCNEEEQKFVHSLELYKDSAIIVLNKPPGMPVQGGI 347
           ++  GD+IFLP +V+E P EK E  C +EE  F+ SLELYKD+AIIVLNKPPGMPVQGGI
Sbjct: 151 SLNIGDKIFLPISVREVPEEKHEHDCTDEESNFIRSLELYKDTAIIVLNKPPGMPVQGGI 210

Query: 348 GIKRSLDELAGTYLKHDYSE 407
           GIK SLDELA  +L++DYSE
Sbjct: 211 GIKWSLDELAAAWLRYDYSE 230



 Score = 49.7 bits (117), Expect(2) = 1e-31
 Identities = 25/39 (64%), Positives = 31/39 (79%)
 Frame = +2

Query: 2   LPRSLVQKLFRLRQVRRESFNISSSDVGVQAQERRVKRV 118
           LPR+LVQKLFRLRQVRRES  +  +D G Q Q+ ++KRV
Sbjct: 108 LPRNLVQKLFRLRQVRRESIAMEVTDDGCQVQKIQLKRV 146


>XP_012450617.1 PREDICTED: RNA pseudouridine synthase 4, mitochondrial [Gossypium
           raimondii] KJB12280.1 hypothetical protein
           B456_002G009500 [Gossypium raimondii]
          Length = 479

 Score =  114 bits (285), Expect(2) = 1e-31
 Identities = 54/80 (67%), Positives = 65/80 (81%)
 Frame = +3

Query: 168 TMEFGDRIFLPNTVQEFPSEKIEWRCNEEEQKFVHSLELYKDSAIIVLNKPPGMPVQGGI 347
           ++  GD+IFLP +V+E P EK E  C +EE  F+ SLELYKD+AIIVLNKPPGMPVQGGI
Sbjct: 151 SLNIGDKIFLPISVREVPEEKHEHDCTDEESNFIRSLELYKDTAIIVLNKPPGMPVQGGI 210

Query: 348 GIKRSLDELAGTYLKHDYSE 407
           GIK SLDELA  +L++DYSE
Sbjct: 211 GIKWSLDELAAAWLRYDYSE 230



 Score = 49.7 bits (117), Expect(2) = 1e-31
 Identities = 25/39 (64%), Positives = 31/39 (79%)
 Frame = +2

Query: 2   LPRSLVQKLFRLRQVRRESFNISSSDVGVQAQERRVKRV 118
           LPR+LVQKLFRLRQVRRES  +  +D G Q Q+ ++KRV
Sbjct: 108 LPRNLVQKLFRLRQVRRESIAMEVTDDGCQVQKIQLKRV 146


>XP_006346360.2 PREDICTED: RNA pseudouridine synthase 4, mitochondrial [Solanum
           tuberosum]
          Length = 478

 Score =  122 bits (306), Expect(2) = 1e-31
 Identities = 59/81 (72%), Positives = 70/81 (86%), Gaps = 1/81 (1%)
 Frame = +3

Query: 168 TMEFGDRIFLPNTVQEFPSEKIEWR-CNEEEQKFVHSLELYKDSAIIVLNKPPGMPVQGG 344
           +M  GDRIFLP TVQ+FPSEK+ +   +EEE+KFVHSLELYKD  I+V+NKPPGMPVQGG
Sbjct: 150 SMNVGDRIFLPITVQKFPSEKVVYYPSSEEERKFVHSLELYKDPEIVVVNKPPGMPVQGG 209

Query: 345 IGIKRSLDELAGTYLKHDYSE 407
           IGIKRSLDELA  Y++H+YSE
Sbjct: 210 IGIKRSLDELAAKYMRHEYSE 230



 Score = 41.6 bits (96), Expect(2) = 1e-31
 Identities = 23/39 (58%), Positives = 28/39 (71%)
 Frame = +2

Query: 2   LPRSLVQKLFRLRQVRRESFNISSSDVGVQAQERRVKRV 118
           LP+SLVQKLFRLRQVRR+S N+         +E+R KRV
Sbjct: 116 LPKSLVQKLFRLRQVRRDSSNV---------EEQRPKRV 145


>XP_002313876.2 hypothetical protein POPTR_0009s09860g [Populus trichocarpa]
           EEE87831.2 hypothetical protein POPTR_0009s09860g
           [Populus trichocarpa]
          Length = 471

 Score =  111 bits (278), Expect(2) = 1e-31
 Identities = 53/80 (66%), Positives = 64/80 (80%)
 Frame = +3

Query: 168 TMEFGDRIFLPNTVQEFPSEKIEWRCNEEEQKFVHSLELYKDSAIIVLNKPPGMPVQGGI 347
           +M+ GDRIFLP +V+  P+EK +  CNEEE  F+  LELYKD+AIIV+NKPPGMPVQGGI
Sbjct: 145 SMDVGDRIFLPISVKVLPAEKQDCHCNEEEINFIRGLELYKDAAIIVVNKPPGMPVQGGI 204

Query: 348 GIKRSLDELAGTYLKHDYSE 407
           GIKRSLDEL+ +    DYSE
Sbjct: 205 GIKRSLDELSASCFSSDYSE 224



 Score = 52.4 bits (124), Expect(2) = 1e-31
 Identities = 27/39 (69%), Positives = 32/39 (82%)
 Frame = +2

Query: 2   LPRSLVQKLFRLRQVRRESFNISSSDVGVQAQERRVKRV 118
           LPR+LVQKLFRLRQVRRES  + S ++G Q QE R+KRV
Sbjct: 102 LPRNLVQKLFRLRQVRRESPVMESCNLGDQGQEHRLKRV 140


>KJB12281.1 hypothetical protein B456_002G009500 [Gossypium raimondii]
          Length = 315

 Score =  114 bits (285), Expect(2) = 1e-31
 Identities = 54/80 (67%), Positives = 65/80 (81%)
 Frame = +3

Query: 168 TMEFGDRIFLPNTVQEFPSEKIEWRCNEEEQKFVHSLELYKDSAIIVLNKPPGMPVQGGI 347
           ++  GD+IFLP +V+E P EK E  C +EE  F+ SLELYKD+AIIVLNKPPGMPVQGGI
Sbjct: 151 SLNIGDKIFLPISVREVPEEKHEHDCTDEESNFIRSLELYKDTAIIVLNKPPGMPVQGGI 210

Query: 348 GIKRSLDELAGTYLKHDYSE 407
           GIK SLDELA  +L++DYSE
Sbjct: 211 GIKWSLDELAAAWLRYDYSE 230



 Score = 49.7 bits (117), Expect(2) = 1e-31
 Identities = 25/39 (64%), Positives = 31/39 (79%)
 Frame = +2

Query: 2   LPRSLVQKLFRLRQVRRESFNISSSDVGVQAQERRVKRV 118
           LPR+LVQKLFRLRQVRRES  +  +D G Q Q+ ++KRV
Sbjct: 108 LPRNLVQKLFRLRQVRRESIAMEVTDDGCQVQKIQLKRV 146


>XP_004230733.2 PREDICTED: RNA pseudouridine synthase 4, mitochondrial [Solanum
           lycopersicum]
          Length = 478

 Score =  122 bits (305), Expect(2) = 1e-31
 Identities = 60/81 (74%), Positives = 69/81 (85%), Gaps = 1/81 (1%)
 Frame = +3

Query: 168 TMEFGDRIFLPNTVQEFPSEKIEWR-CNEEEQKFVHSLELYKDSAIIVLNKPPGMPVQGG 344
           +M  GDRIFLP TVQ+FPSEK+ +   +EEE+KFVHSLELYKD+ IIV+NKPPGMPVQGG
Sbjct: 150 SMNVGDRIFLPITVQKFPSEKVVYYPSSEEERKFVHSLELYKDAEIIVVNKPPGMPVQGG 209

Query: 345 IGIKRSLDELAGTYLKHDYSE 407
           IGIKRSLDELA  Y+ H YSE
Sbjct: 210 IGIKRSLDELAAKYMSHQYSE 230



 Score = 41.6 bits (96), Expect(2) = 1e-31
 Identities = 23/39 (58%), Positives = 28/39 (71%)
 Frame = +2

Query: 2   LPRSLVQKLFRLRQVRRESFNISSSDVGVQAQERRVKRV 118
           LP+SLVQKLFRLRQVRR+S N+         +E+R KRV
Sbjct: 116 LPKSLVQKLFRLRQVRRDSSNV---------EEQRPKRV 145


>XP_011001172.1 PREDICTED: RNA pseudouridine synthase 4, mitochondrial isoform X1
           [Populus euphratica]
          Length = 475

 Score =  110 bits (275), Expect(2) = 1e-31
 Identities = 52/80 (65%), Positives = 63/80 (78%)
 Frame = +3

Query: 168 TMEFGDRIFLPNTVQEFPSEKIEWRCNEEEQKFVHSLELYKDSAIIVLNKPPGMPVQGGI 347
           +M+ GDRIFLP +V+  P+EK +  C+EEE  F+  LELYKD AIIV+NKPPGMPVQGGI
Sbjct: 145 SMDVGDRIFLPISVKALPAEKQDCHCSEEETNFIRGLELYKDDAIIVVNKPPGMPVQGGI 204

Query: 348 GIKRSLDELAGTYLKHDYSE 407
           GIKRSLDEL+ +    DYSE
Sbjct: 205 GIKRSLDELSASCFSSDYSE 224



 Score = 53.1 bits (126), Expect(2) = 1e-31
 Identities = 27/39 (69%), Positives = 32/39 (82%)
 Frame = +2

Query: 2   LPRSLVQKLFRLRQVRRESFNISSSDVGVQAQERRVKRV 118
           LPR+LVQKLFRLRQVRRES  + S ++G Q QE R+KRV
Sbjct: 102 LPRNLVQKLFRLRQVRRESSVMESCNLGDQGQEHRLKRV 140


>XP_011001179.1 PREDICTED: RNA pseudouridine synthase 4, mitochondrial isoform X2
           [Populus euphratica]
          Length = 471

 Score =  110 bits (275), Expect(2) = 1e-31
 Identities = 52/80 (65%), Positives = 63/80 (78%)
 Frame = +3

Query: 168 TMEFGDRIFLPNTVQEFPSEKIEWRCNEEEQKFVHSLELYKDSAIIVLNKPPGMPVQGGI 347
           +M+ GDRIFLP +V+  P+EK +  C+EEE  F+  LELYKD AIIV+NKPPGMPVQGGI
Sbjct: 145 SMDVGDRIFLPISVKALPAEKQDCHCSEEETNFIRGLELYKDDAIIVVNKPPGMPVQGGI 204

Query: 348 GIKRSLDELAGTYLKHDYSE 407
           GIKRSLDEL+ +    DYSE
Sbjct: 205 GIKRSLDELSASCFSSDYSE 224



 Score = 53.1 bits (126), Expect(2) = 1e-31
 Identities = 27/39 (69%), Positives = 32/39 (82%)
 Frame = +2

Query: 2   LPRSLVQKLFRLRQVRRESFNISSSDVGVQAQERRVKRV 118
           LPR+LVQKLFRLRQVRRES  + S ++G Q QE R+KRV
Sbjct: 102 LPRNLVQKLFRLRQVRRESSVMESCNLGDQGQEHRLKRV 140