BLASTX nr result
ID: Panax25_contig00031192
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax25_contig00031192
(501 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_017259048.1 PREDICTED: DNA ligase 4 isoform X1 [Daucus carota... 172 1e-51
XP_017259049.1 PREDICTED: DNA ligase 4 isoform X2 [Daucus carota... 172 1e-51
CBI17913.3 unnamed protein product, partial [Vitis vinifera] 158 1e-47
XP_002263967.1 PREDICTED: DNA ligase 4 isoform X1 [Vitis vinifera] 158 1e-47
XP_019078590.1 PREDICTED: DNA ligase 4 isoform X2 [Vitis vinifera] 158 1e-47
XP_019078591.1 PREDICTED: DNA ligase 4 isoform X3 [Vitis vinifera] 158 1e-47
KDO61940.1 hypothetical protein CISIN_1g0010821mg, partial [Citr... 159 4e-47
XP_006474277.1 PREDICTED: DNA ligase 4 isoform X1 [Citrus sinens... 159 8e-47
XP_006453240.1 hypothetical protein CICLE_v10007283mg [Citrus cl... 159 8e-47
XP_006453239.1 hypothetical protein CICLE_v10007283mg [Citrus cl... 159 8e-47
OMO77093.1 DNA ligase, ATP-dependent [Corchorus capsularis] 154 5e-46
XP_017611157.1 PREDICTED: DNA ligase 4 isoform X1 [Gossypium arb... 152 5e-46
XP_017611166.1 PREDICTED: DNA ligase 4 isoform X2 [Gossypium arb... 152 5e-46
KHG24358.1 DNA ligase 4 -like protein [Gossypium arboreum] 152 5e-46
KJB83357.1 hypothetical protein B456_013G243100, partial [Gossyp... 152 2e-45
KJB83355.1 hypothetical protein B456_013G243100, partial [Gossyp... 152 2e-45
XP_012461708.1 PREDICTED: DNA ligase 4 isoform X1 [Gossypium rai... 152 2e-45
GAV59686.1 DNA_ligase_A_M domain-containing protein/DNA_ligase_A... 154 2e-45
XP_012461709.1 PREDICTED: DNA ligase 4 isoform X2 [Gossypium rai... 152 2e-45
XP_002325262.2 DNA ligase IV family protein [Populus trichocarpa... 147 3e-45
>XP_017259048.1 PREDICTED: DNA ligase 4 isoform X1 [Daucus carota subsp. sativus]
Length = 1191
Score = 172 bits (437), Expect(2) = 1e-51
Identities = 81/113 (71%), Positives = 88/113 (77%)
Frame = -2
Query: 500 KGIKFQAAMLRGDIIHYSWLFDCCSQXXXXXXXXKYFLHXXXXXXXXXKEEIDDFSDSYY 321
KGIKFQAA LRGD+IHYSWLFDCCSQ KYFLH +EEID++SDSY+
Sbjct: 701 KGIKFQAAKLRGDVIHYSWLFDCCSQKKLLPLKPKYFLHLSEQSKKLLEEEIDEYSDSYF 760
Query: 320 WDLDIVDFKQLLNNLDRSEDSKTVDYYKKKYCPNDKWSRFHGCCIYFHLSIQS 162
DLDIVD KQLLNN+DR EDSK+VDYYKKKYCP DKWS F GCCIYFHLS QS
Sbjct: 761 LDLDIVDLKQLLNNVDRLEDSKSVDYYKKKYCPKDKWSCFTGCCIYFHLSTQS 813
Score = 58.2 bits (139), Expect(2) = 1e-51
Identities = 28/37 (75%), Positives = 33/37 (89%)
Frame = -3
Query: 130 KALLELAQRRMRLEVFMGGGKVCNSLSDATHLVVLCL 20
KALLELA+RR++LEV MGGGKVC+SLS ATHLV+ L
Sbjct: 820 KALLELARRRLKLEVSMGGGKVCSSLSQATHLVIQSL 856
>XP_017259049.1 PREDICTED: DNA ligase 4 isoform X2 [Daucus carota subsp. sativus]
Length = 1179
Score = 172 bits (437), Expect(2) = 1e-51
Identities = 81/113 (71%), Positives = 88/113 (77%)
Frame = -2
Query: 500 KGIKFQAAMLRGDIIHYSWLFDCCSQXXXXXXXXKYFLHXXXXXXXXXKEEIDDFSDSYY 321
KGIKFQAA LRGD+IHYSWLFDCCSQ KYFLH +EEID++SDSY+
Sbjct: 701 KGIKFQAAKLRGDVIHYSWLFDCCSQKKLLPLKPKYFLHLSEQSKKLLEEEIDEYSDSYF 760
Query: 320 WDLDIVDFKQLLNNLDRSEDSKTVDYYKKKYCPNDKWSRFHGCCIYFHLSIQS 162
DLDIVD KQLLNN+DR EDSK+VDYYKKKYCP DKWS F GCCIYFHLS QS
Sbjct: 761 LDLDIVDLKQLLNNVDRLEDSKSVDYYKKKYCPKDKWSCFTGCCIYFHLSTQS 813
Score = 58.2 bits (139), Expect(2) = 1e-51
Identities = 28/37 (75%), Positives = 33/37 (89%)
Frame = -3
Query: 130 KALLELAQRRMRLEVFMGGGKVCNSLSDATHLVVLCL 20
KALLELA+RR++LEV MGGGKVC+SLS ATHLV+ L
Sbjct: 820 KALLELARRRLKLEVSMGGGKVCSSLSQATHLVIQSL 856
>CBI17913.3 unnamed protein product, partial [Vitis vinifera]
Length = 1163
Score = 158 bits (400), Expect(2) = 1e-47
Identities = 75/113 (66%), Positives = 84/113 (74%)
Frame = -2
Query: 500 KGIKFQAAMLRGDIIHYSWLFDCCSQXXXXXXXXKYFLHXXXXXXXXXKEEIDDFSDSYY 321
KGIK+QAA LRGDIIH SW+FDCCSQ KYFL +EEID FSDSYY
Sbjct: 704 KGIKYQAAKLRGDIIHCSWVFDCCSQKKLLPLQPKYFLFLSEHSKKKLQEEIDKFSDSYY 763
Query: 320 WDLDIVDFKQLLNNLDRSEDSKTVDYYKKKYCPNDKWSRFHGCCIYFHLSIQS 162
DLDI D KQLL+N+DRS++SKT+DYYK KYCP +KWSRFH CCI FH SIQS
Sbjct: 764 QDLDISDIKQLLSNVDRSDNSKTIDYYKNKYCPKEKWSRFHDCCICFHSSIQS 816
Score = 58.9 bits (141), Expect(2) = 1e-47
Identities = 29/47 (61%), Positives = 36/47 (76%)
Frame = -3
Query: 142 NLDWKALLELAQRRMRLEVFMGGGKVCNSLSDATHLVVLCLRGSNVD 2
N DW+ L +LA RRM+LEV MGGGKV N+LS ATHLVV + G ++D
Sbjct: 818 NSDWELLSKLALRRMKLEVSMGGGKVGNNLSQATHLVVFSVPGFDLD 864
>XP_002263967.1 PREDICTED: DNA ligase 4 isoform X1 [Vitis vinifera]
Length = 1162
Score = 158 bits (400), Expect(2) = 1e-47
Identities = 75/113 (66%), Positives = 84/113 (74%)
Frame = -2
Query: 500 KGIKFQAAMLRGDIIHYSWLFDCCSQXXXXXXXXKYFLHXXXXXXXXXKEEIDDFSDSYY 321
KGIK+QAA LRGDIIH SW+FDCCSQ KYFL +EEID FSDSYY
Sbjct: 703 KGIKYQAAKLRGDIIHCSWVFDCCSQKKLLPLQPKYFLFLSEHSKKKLQEEIDKFSDSYY 762
Query: 320 WDLDIVDFKQLLNNLDRSEDSKTVDYYKKKYCPNDKWSRFHGCCIYFHLSIQS 162
DLDI D KQLL+N+DRS++SKT+DYYK KYCP +KWSRFH CCI FH SIQS
Sbjct: 763 QDLDISDIKQLLSNVDRSDNSKTIDYYKNKYCPKEKWSRFHDCCICFHSSIQS 815
Score = 58.9 bits (141), Expect(2) = 1e-47
Identities = 29/47 (61%), Positives = 36/47 (76%)
Frame = -3
Query: 142 NLDWKALLELAQRRMRLEVFMGGGKVCNSLSDATHLVVLCLRGSNVD 2
N DW+ L +LA RRM+LEV MGGGKV N+LS ATHLVV + G ++D
Sbjct: 817 NSDWELLSKLALRRMKLEVSMGGGKVGNNLSQATHLVVFSVPGFDLD 863
>XP_019078590.1 PREDICTED: DNA ligase 4 isoform X2 [Vitis vinifera]
Length = 933
Score = 158 bits (400), Expect(2) = 1e-47
Identities = 75/113 (66%), Positives = 84/113 (74%)
Frame = -2
Query: 500 KGIKFQAAMLRGDIIHYSWLFDCCSQXXXXXXXXKYFLHXXXXXXXXXKEEIDDFSDSYY 321
KGIK+QAA LRGDIIH SW+FDCCSQ KYFL +EEID FSDSYY
Sbjct: 474 KGIKYQAAKLRGDIIHCSWVFDCCSQKKLLPLQPKYFLFLSEHSKKKLQEEIDKFSDSYY 533
Query: 320 WDLDIVDFKQLLNNLDRSEDSKTVDYYKKKYCPNDKWSRFHGCCIYFHLSIQS 162
DLDI D KQLL+N+DRS++SKT+DYYK KYCP +KWSRFH CCI FH SIQS
Sbjct: 534 QDLDISDIKQLLSNVDRSDNSKTIDYYKNKYCPKEKWSRFHDCCICFHSSIQS 586
Score = 58.9 bits (141), Expect(2) = 1e-47
Identities = 29/47 (61%), Positives = 36/47 (76%)
Frame = -3
Query: 142 NLDWKALLELAQRRMRLEVFMGGGKVCNSLSDATHLVVLCLRGSNVD 2
N DW+ L +LA RRM+LEV MGGGKV N+LS ATHLVV + G ++D
Sbjct: 588 NSDWELLSKLALRRMKLEVSMGGGKVGNNLSQATHLVVFSVPGFDLD 634
>XP_019078591.1 PREDICTED: DNA ligase 4 isoform X3 [Vitis vinifera]
Length = 890
Score = 158 bits (400), Expect(2) = 1e-47
Identities = 75/113 (66%), Positives = 84/113 (74%)
Frame = -2
Query: 500 KGIKFQAAMLRGDIIHYSWLFDCCSQXXXXXXXXKYFLHXXXXXXXXXKEEIDDFSDSYY 321
KGIK+QAA LRGDIIH SW+FDCCSQ KYFL +EEID FSDSYY
Sbjct: 703 KGIKYQAAKLRGDIIHCSWVFDCCSQKKLLPLQPKYFLFLSEHSKKKLQEEIDKFSDSYY 762
Query: 320 WDLDIVDFKQLLNNLDRSEDSKTVDYYKKKYCPNDKWSRFHGCCIYFHLSIQS 162
DLDI D KQLL+N+DRS++SKT+DYYK KYCP +KWSRFH CCI FH SIQS
Sbjct: 763 QDLDISDIKQLLSNVDRSDNSKTIDYYKNKYCPKEKWSRFHDCCICFHSSIQS 815
Score = 58.9 bits (141), Expect(2) = 1e-47
Identities = 29/47 (61%), Positives = 36/47 (76%)
Frame = -3
Query: 142 NLDWKALLELAQRRMRLEVFMGGGKVCNSLSDATHLVVLCLRGSNVD 2
N DW+ L +LA RRM+LEV MGGGKV N+LS ATHLVV + G ++D
Sbjct: 817 NSDWELLSKLALRRMKLEVSMGGGKVGNNLSQATHLVVFSVPGFDLD 863
>KDO61940.1 hypothetical protein CISIN_1g0010821mg, partial [Citrus sinensis]
KDO61941.1 hypothetical protein CISIN_1g0010821mg,
partial [Citrus sinensis] KDO61942.1 hypothetical
protein CISIN_1g0010821mg, partial [Citrus sinensis]
KDO61943.1 hypothetical protein CISIN_1g0010821mg,
partial [Citrus sinensis] KDO61944.1 hypothetical
protein CISIN_1g0010821mg, partial [Citrus sinensis]
Length = 743
Score = 159 bits (403), Expect(2) = 4e-47
Identities = 68/112 (60%), Positives = 84/112 (75%)
Frame = -2
Query: 500 KGIKFQAAMLRGDIIHYSWLFDCCSQXXXXXXXXKYFLHXXXXXXXXXKEEIDDFSDSYY 321
KG+K++AA RGD+IHYSW+ DCCSQ KY+LH +EE+D+FSD Y+
Sbjct: 288 KGLKYEAAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEVDEFSDLYF 347
Query: 320 WDLDIVDFKQLLNNLDRSEDSKTVDYYKKKYCPNDKWSRFHGCCIYFHLSIQ 165
WDLD+ D KQLL+N+DRSED KT+DYYKKKYCP DKWS FHGCCIYF+ S +
Sbjct: 348 WDLDLADIKQLLSNVDRSEDPKTIDYYKKKYCPQDKWSCFHGCCIYFYHSTE 399
Score = 55.8 bits (133), Expect(2) = 4e-47
Identities = 25/45 (55%), Positives = 36/45 (80%)
Frame = -3
Query: 136 DWKALLELAQRRMRLEVFMGGGKVCNSLSDATHLVVLCLRGSNVD 2
DW+ LL LA RR++LE+ GGKVCN+L++ATH+VVL + G +V+
Sbjct: 404 DWEVLLGLALRRLKLEISFHGGKVCNNLANATHVVVLSVLGYDVN 448
>XP_006474277.1 PREDICTED: DNA ligase 4 isoform X1 [Citrus sinensis] XP_006474278.1
PREDICTED: DNA ligase 4 isoform X1 [Citrus sinensis]
Length = 1174
Score = 159 bits (403), Expect(2) = 8e-47
Identities = 68/112 (60%), Positives = 84/112 (75%)
Frame = -2
Query: 500 KGIKFQAAMLRGDIIHYSWLFDCCSQXXXXXXXXKYFLHXXXXXXXXXKEEIDDFSDSYY 321
KG+K++AA RGD+IHYSW+ DCCSQ KY+LH +EE+D+FSD Y+
Sbjct: 719 KGLKYEAAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEVDEFSDLYF 778
Query: 320 WDLDIVDFKQLLNNLDRSEDSKTVDYYKKKYCPNDKWSRFHGCCIYFHLSIQ 165
WDLD+ D KQLL+N+DRSED KT+DYYKKKYCP DKWS FHGCCIYF+ S +
Sbjct: 779 WDLDLADIKQLLSNVDRSEDPKTIDYYKKKYCPQDKWSCFHGCCIYFYHSTE 830
Score = 55.1 bits (131), Expect(2) = 8e-47
Identities = 24/45 (53%), Positives = 36/45 (80%)
Frame = -3
Query: 136 DWKALLELAQRRMRLEVFMGGGKVCNSLSDATHLVVLCLRGSNVD 2
DW+ +L LA RR++LE+ GGKVCN+L++ATH+VVL + G +V+
Sbjct: 835 DWEVILGLALRRLKLEISFHGGKVCNNLANATHVVVLSVLGYDVN 879
>XP_006453240.1 hypothetical protein CICLE_v10007283mg [Citrus clementina]
XP_006474279.1 PREDICTED: DNA ligase 4 isoform X2 [Citrus
sinensis] ESR66480.1 hypothetical protein
CICLE_v10007283mg [Citrus clementina]
Length = 1159
Score = 159 bits (403), Expect(2) = 8e-47
Identities = 68/112 (60%), Positives = 84/112 (75%)
Frame = -2
Query: 500 KGIKFQAAMLRGDIIHYSWLFDCCSQXXXXXXXXKYFLHXXXXXXXXXKEEIDDFSDSYY 321
KG+K++AA RGD+IHYSW+ DCCSQ KY+LH +EE+D+FSD Y+
Sbjct: 704 KGLKYEAAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEVDEFSDLYF 763
Query: 320 WDLDIVDFKQLLNNLDRSEDSKTVDYYKKKYCPNDKWSRFHGCCIYFHLSIQ 165
WDLD+ D KQLL+N+DRSED KT+DYYKKKYCP DKWS FHGCCIYF+ S +
Sbjct: 764 WDLDLADIKQLLSNVDRSEDPKTIDYYKKKYCPQDKWSCFHGCCIYFYHSTE 815
Score = 55.1 bits (131), Expect(2) = 8e-47
Identities = 24/45 (53%), Positives = 36/45 (80%)
Frame = -3
Query: 136 DWKALLELAQRRMRLEVFMGGGKVCNSLSDATHLVVLCLRGSNVD 2
DW+ +L LA RR++LE+ GGKVCN+L++ATH+VVL + G +V+
Sbjct: 820 DWEVILGLALRRLKLEISFHGGKVCNNLANATHVVVLSVLGYDVN 864
>XP_006453239.1 hypothetical protein CICLE_v10007283mg [Citrus clementina]
ESR66479.1 hypothetical protein CICLE_v10007283mg
[Citrus clementina]
Length = 824
Score = 159 bits (403), Expect(2) = 8e-47
Identities = 68/112 (60%), Positives = 84/112 (75%)
Frame = -2
Query: 500 KGIKFQAAMLRGDIIHYSWLFDCCSQXXXXXXXXKYFLHXXXXXXXXXKEEIDDFSDSYY 321
KG+K++AA RGD+IHYSW+ DCCSQ KY+LH +EE+D+FSD Y+
Sbjct: 369 KGLKYEAAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEVDEFSDLYF 428
Query: 320 WDLDIVDFKQLLNNLDRSEDSKTVDYYKKKYCPNDKWSRFHGCCIYFHLSIQ 165
WDLD+ D KQLL+N+DRSED KT+DYYKKKYCP DKWS FHGCCIYF+ S +
Sbjct: 429 WDLDLADIKQLLSNVDRSEDPKTIDYYKKKYCPQDKWSCFHGCCIYFYHSTE 480
Score = 55.1 bits (131), Expect(2) = 8e-47
Identities = 24/45 (53%), Positives = 36/45 (80%)
Frame = -3
Query: 136 DWKALLELAQRRMRLEVFMGGGKVCNSLSDATHLVVLCLRGSNVD 2
DW+ +L LA RR++LE+ GGKVCN+L++ATH+VVL + G +V+
Sbjct: 485 DWEVILGLALRRLKLEISFHGGKVCNNLANATHVVVLSVLGYDVN 529
>OMO77093.1 DNA ligase, ATP-dependent [Corchorus capsularis]
Length = 1204
Score = 154 bits (390), Expect(2) = 5e-46
Identities = 67/113 (59%), Positives = 81/113 (71%)
Frame = -2
Query: 500 KGIKFQAAMLRGDIIHYSWLFDCCSQXXXXXXXXKYFLHXXXXXXXXXKEEIDDFSDSYY 321
KGIK+QAA L G+IIHYSW+ DCCSQ KYFL ++E+DDFSD YY
Sbjct: 711 KGIKYQAAKLHGEIIHYSWVLDCCSQKKLIPLQPKYFLFLSESSKKKLQQEVDDFSDPYY 770
Query: 320 WDLDIVDFKQLLNNLDRSEDSKTVDYYKKKYCPNDKWSRFHGCCIYFHLSIQS 162
WDLD+ D KQLLNN+ RSE+ T+DYY+KKYCP D+WS FHGC +YF+ S QS
Sbjct: 771 WDLDLADIKQLLNNIQRSENPNTIDYYRKKYCPKDRWSHFHGCSVYFYSSAQS 823
Score = 57.4 bits (137), Expect(2) = 5e-46
Identities = 27/45 (60%), Positives = 33/45 (73%)
Frame = -3
Query: 136 DWKALLELAQRRMRLEVFMGGGKVCNSLSDATHLVVLCLRGSNVD 2
DW+ LL LA RR++LEV MGGGK+ L ATHLVVL + G +VD
Sbjct: 827 DWQVLLTLALRRLKLEVLMGGGKISEDLKHATHLVVLSVPGFDVD 871
>XP_017611157.1 PREDICTED: DNA ligase 4 isoform X1 [Gossypium arboreum]
Length = 1182
Score = 152 bits (385), Expect(2) = 5e-46
Identities = 67/113 (59%), Positives = 80/113 (70%)
Frame = -2
Query: 500 KGIKFQAAMLRGDIIHYSWLFDCCSQXXXXXXXXKYFLHXXXXXXXXXKEEIDDFSDSYY 321
KGIK+QAA L GDIIHYSW DCCSQ KYFL ++E+D + D YY
Sbjct: 703 KGIKYQAAKLHGDIIHYSWALDCCSQKKLIPLQPKYFLFLSESSKTKLQQEVDQYFDPYY 762
Query: 320 WDLDIVDFKQLLNNLDRSEDSKTVDYYKKKYCPNDKWSRFHGCCIYFHLSIQS 162
WDLD+ D KQLLNN+ RSE+SKT+DYY+ KYCPNDKWS FHGC +YF+ S +S
Sbjct: 763 WDLDLADIKQLLNNIQRSENSKTIDYYRAKYCPNDKWSLFHGCSVYFYSSAES 815
Score = 59.3 bits (142), Expect(2) = 5e-46
Identities = 27/45 (60%), Positives = 35/45 (77%)
Frame = -3
Query: 136 DWKALLELAQRRMRLEVFMGGGKVCNSLSDATHLVVLCLRGSNVD 2
DW+ LL LA RR++LE+ MGGGK+ +LS ATHLVVL + G +VD
Sbjct: 819 DWQVLLNLALRRLKLEILMGGGKISENLSHATHLVVLSVPGLDVD 863
>XP_017611166.1 PREDICTED: DNA ligase 4 isoform X2 [Gossypium arboreum]
Length = 1158
Score = 152 bits (385), Expect(2) = 5e-46
Identities = 67/113 (59%), Positives = 80/113 (70%)
Frame = -2
Query: 500 KGIKFQAAMLRGDIIHYSWLFDCCSQXXXXXXXXKYFLHXXXXXXXXXKEEIDDFSDSYY 321
KGIK+QAA L GDIIHYSW DCCSQ KYFL ++E+D + D YY
Sbjct: 679 KGIKYQAAKLHGDIIHYSWALDCCSQKKLIPLQPKYFLFLSESSKTKLQQEVDQYFDPYY 738
Query: 320 WDLDIVDFKQLLNNLDRSEDSKTVDYYKKKYCPNDKWSRFHGCCIYFHLSIQS 162
WDLD+ D KQLLNN+ RSE+SKT+DYY+ KYCPNDKWS FHGC +YF+ S +S
Sbjct: 739 WDLDLADIKQLLNNIQRSENSKTIDYYRAKYCPNDKWSLFHGCSVYFYSSAES 791
Score = 59.3 bits (142), Expect(2) = 5e-46
Identities = 27/45 (60%), Positives = 35/45 (77%)
Frame = -3
Query: 136 DWKALLELAQRRMRLEVFMGGGKVCNSLSDATHLVVLCLRGSNVD 2
DW+ LL LA RR++LE+ MGGGK+ +LS ATHLVVL + G +VD
Sbjct: 795 DWQVLLNLALRRLKLEILMGGGKISENLSHATHLVVLSVPGLDVD 839
>KHG24358.1 DNA ligase 4 -like protein [Gossypium arboreum]
Length = 1157
Score = 152 bits (385), Expect(2) = 5e-46
Identities = 67/113 (59%), Positives = 80/113 (70%)
Frame = -2
Query: 500 KGIKFQAAMLRGDIIHYSWLFDCCSQXXXXXXXXKYFLHXXXXXXXXXKEEIDDFSDSYY 321
KGIK+QAA L GDIIHYSW DCCSQ KYFL ++E+D + D YY
Sbjct: 678 KGIKYQAAKLHGDIIHYSWALDCCSQKKLIPLQPKYFLFLSESSKTKLQQEVDQYFDPYY 737
Query: 320 WDLDIVDFKQLLNNLDRSEDSKTVDYYKKKYCPNDKWSRFHGCCIYFHLSIQS 162
WDLD+ D KQLLNN+ RSE+SKT+DYY+ KYCPNDKWS FHGC +YF+ S +S
Sbjct: 738 WDLDLADIKQLLNNIQRSENSKTIDYYRAKYCPNDKWSLFHGCSVYFYSSAES 790
Score = 59.3 bits (142), Expect(2) = 5e-46
Identities = 27/45 (60%), Positives = 35/45 (77%)
Frame = -3
Query: 136 DWKALLELAQRRMRLEVFMGGGKVCNSLSDATHLVVLCLRGSNVD 2
DW+ LL LA RR++LE+ MGGGK+ +LS ATHLVVL + G +VD
Sbjct: 794 DWQVLLNLALRRLKLEILMGGGKISENLSHATHLVVLSVPGLDVD 838
>KJB83357.1 hypothetical protein B456_013G243100, partial [Gossypium raimondii]
Length = 1211
Score = 152 bits (384), Expect(2) = 2e-45
Identities = 67/113 (59%), Positives = 81/113 (71%)
Frame = -2
Query: 500 KGIKFQAAMLRGDIIHYSWLFDCCSQXXXXXXXXKYFLHXXXXXXXXXKEEIDDFSDSYY 321
KGIK+QAA L GDIIHYSW DCCSQ KYFL ++E+D + D YY
Sbjct: 733 KGIKYQAAKLHGDIIHYSWALDCCSQKKLIPLQPKYFLFLSESSKMKLQQEVDQYFDPYY 792
Query: 320 WDLDIVDFKQLLNNLDRSEDSKTVDYYKKKYCPNDKWSRFHGCCIYFHLSIQS 162
WDLD+VD K+LLNN+ RSE+SKT+DYY+ KYCPNDKWS FHGC +YF+ S +S
Sbjct: 793 WDLDLVDVKRLLNNIQRSENSKTIDYYRAKYCPNDKWSLFHGCSVYFYSSAES 845
Score = 57.4 bits (137), Expect(2) = 2e-45
Identities = 26/45 (57%), Positives = 35/45 (77%)
Frame = -3
Query: 136 DWKALLELAQRRMRLEVFMGGGKVCNSLSDATHLVVLCLRGSNVD 2
DW+ LL LA RR++ E+ MGGGK+ +LS+ATHLVVL + G +VD
Sbjct: 849 DWQVLLNLALRRLKHEILMGGGKISENLSNATHLVVLSVPGLDVD 893
>KJB83355.1 hypothetical protein B456_013G243100, partial [Gossypium raimondii]
Length = 1210
Score = 152 bits (384), Expect(2) = 2e-45
Identities = 67/113 (59%), Positives = 81/113 (71%)
Frame = -2
Query: 500 KGIKFQAAMLRGDIIHYSWLFDCCSQXXXXXXXXKYFLHXXXXXXXXXKEEIDDFSDSYY 321
KGIK+QAA L GDIIHYSW DCCSQ KYFL ++E+D + D YY
Sbjct: 732 KGIKYQAAKLHGDIIHYSWALDCCSQKKLIPLQPKYFLFLSESSKMKLQQEVDQYFDPYY 791
Query: 320 WDLDIVDFKQLLNNLDRSEDSKTVDYYKKKYCPNDKWSRFHGCCIYFHLSIQS 162
WDLD+VD K+LLNN+ RSE+SKT+DYY+ KYCPNDKWS FHGC +YF+ S +S
Sbjct: 792 WDLDLVDVKRLLNNIQRSENSKTIDYYRAKYCPNDKWSLFHGCSVYFYSSAES 844
Score = 57.4 bits (137), Expect(2) = 2e-45
Identities = 26/45 (57%), Positives = 35/45 (77%)
Frame = -3
Query: 136 DWKALLELAQRRMRLEVFMGGGKVCNSLSDATHLVVLCLRGSNVD 2
DW+ LL LA RR++ E+ MGGGK+ +LS+ATHLVVL + G +VD
Sbjct: 848 DWQVLLNLALRRLKHEILMGGGKISENLSNATHLVVLSVPGLDVD 892
>XP_012461708.1 PREDICTED: DNA ligase 4 isoform X1 [Gossypium raimondii]
Length = 1180
Score = 152 bits (384), Expect(2) = 2e-45
Identities = 67/113 (59%), Positives = 81/113 (71%)
Frame = -2
Query: 500 KGIKFQAAMLRGDIIHYSWLFDCCSQXXXXXXXXKYFLHXXXXXXXXXKEEIDDFSDSYY 321
KGIK+QAA L GDIIHYSW DCCSQ KYFL ++E+D + D YY
Sbjct: 702 KGIKYQAAKLHGDIIHYSWALDCCSQKKLIPLQPKYFLFLSESSKMKLQQEVDQYFDPYY 761
Query: 320 WDLDIVDFKQLLNNLDRSEDSKTVDYYKKKYCPNDKWSRFHGCCIYFHLSIQS 162
WDLD+VD K+LLNN+ RSE+SKT+DYY+ KYCPNDKWS FHGC +YF+ S +S
Sbjct: 762 WDLDLVDVKRLLNNIQRSENSKTIDYYRAKYCPNDKWSLFHGCSVYFYSSAES 814
Score = 57.4 bits (137), Expect(2) = 2e-45
Identities = 26/45 (57%), Positives = 35/45 (77%)
Frame = -3
Query: 136 DWKALLELAQRRMRLEVFMGGGKVCNSLSDATHLVVLCLRGSNVD 2
DW+ LL LA RR++ E+ MGGGK+ +LS+ATHLVVL + G +VD
Sbjct: 818 DWQVLLNLALRRLKHEILMGGGKISENLSNATHLVVLSVPGLDVD 862
>GAV59686.1 DNA_ligase_A_M domain-containing protein/DNA_ligase_A_N
domain-containing protein/DNA_ligase_A_C
domain-containing protein/PTCB-BRCT domain-containing
protein [Cephalotus follicularis]
Length = 1159
Score = 154 bits (388), Expect(2) = 2e-45
Identities = 68/113 (60%), Positives = 82/113 (72%)
Frame = -2
Query: 500 KGIKFQAAMLRGDIIHYSWLFDCCSQXXXXXXXXKYFLHXXXXXXXXXKEEIDDFSDSYY 321
KGIK+ AA L GDIIHYSW+ +CCSQ KYFL +EE+D++SDSYY
Sbjct: 703 KGIKYHAAKLHGDIIHYSWVLECCSQKKLIPLQPKYFLFLSEASKKKLQEEVDEYSDSYY 762
Query: 320 WDLDIVDFKQLLNNLDRSEDSKTVDYYKKKYCPNDKWSRFHGCCIYFHLSIQS 162
WDLD+ D + LL+N DRSED+KTVD+YKKKYCP KWS FHGCCIYF+ S+ S
Sbjct: 763 WDLDLADIRHLLSNTDRSEDAKTVDFYKKKYCPELKWSLFHGCCIYFYTSVGS 815
Score = 55.8 bits (133), Expect(2) = 2e-45
Identities = 25/45 (55%), Positives = 35/45 (77%)
Frame = -3
Query: 136 DWKALLELAQRRMRLEVFMGGGKVCNSLSDATHLVVLCLRGSNVD 2
DW+ LL +A RR++LEVFMGGG V ++L+ ATHLVV + G +V+
Sbjct: 819 DWEVLLGIASRRLQLEVFMGGGNVSDNLAHATHLVVFSISGLDVN 863
>XP_012461709.1 PREDICTED: DNA ligase 4 isoform X2 [Gossypium raimondii]
Length = 1156
Score = 152 bits (384), Expect(2) = 2e-45
Identities = 67/113 (59%), Positives = 81/113 (71%)
Frame = -2
Query: 500 KGIKFQAAMLRGDIIHYSWLFDCCSQXXXXXXXXKYFLHXXXXXXXXXKEEIDDFSDSYY 321
KGIK+QAA L GDIIHYSW DCCSQ KYFL ++E+D + D YY
Sbjct: 678 KGIKYQAAKLHGDIIHYSWALDCCSQKKLIPLQPKYFLFLSESSKMKLQQEVDQYFDPYY 737
Query: 320 WDLDIVDFKQLLNNLDRSEDSKTVDYYKKKYCPNDKWSRFHGCCIYFHLSIQS 162
WDLD+VD K+LLNN+ RSE+SKT+DYY+ KYCPNDKWS FHGC +YF+ S +S
Sbjct: 738 WDLDLVDVKRLLNNIQRSENSKTIDYYRAKYCPNDKWSLFHGCSVYFYSSAES 790
Score = 57.4 bits (137), Expect(2) = 2e-45
Identities = 26/45 (57%), Positives = 35/45 (77%)
Frame = -3
Query: 136 DWKALLELAQRRMRLEVFMGGGKVCNSLSDATHLVVLCLRGSNVD 2
DW+ LL LA RR++ E+ MGGGK+ +LS+ATHLVVL + G +VD
Sbjct: 794 DWQVLLNLALRRLKHEILMGGGKISENLSNATHLVVLSVPGLDVD 838
>XP_002325262.2 DNA ligase IV family protein [Populus trichocarpa] EEF03827.2 DNA
ligase IV family protein [Populus trichocarpa]
Length = 1242
Score = 147 bits (372), Expect(2) = 3e-45
Identities = 66/113 (58%), Positives = 80/113 (70%)
Frame = -2
Query: 500 KGIKFQAAMLRGDIIHYSWLFDCCSQXXXXXXXXKYFLHXXXXXXXXXKEEIDDFSDSYY 321
KGIK+QAA L GDIIHYSW+ DCC Q K FL EEID+FSDSYY
Sbjct: 712 KGIKYQAAKLHGDIIHYSWVLDCCLQKKLLPLQPKSFLFLSDGSKKKLHEEIDEFSDSYY 771
Query: 320 WDLDIVDFKQLLNNLDRSEDSKTVDYYKKKYCPNDKWSRFHGCCIYFHLSIQS 162
WDLD+ D KQLL+N++ SED+K +D K+KYCP +KWS FHGCC+YFH+S +S
Sbjct: 772 WDLDLSDIKQLLSNINASEDAKAIDDLKQKYCPEEKWSLFHGCCVYFHISRES 824
Score = 61.6 bits (148), Expect(2) = 3e-45
Identities = 28/45 (62%), Positives = 38/45 (84%)
Frame = -3
Query: 136 DWKALLELAQRRMRLEVFMGGGKVCNSLSDATHLVVLCLRGSNVD 2
DW++LL LA RR++LE+FMGGGKV N+++ ATHLVVL + S+VD
Sbjct: 828 DWESLLGLAFRRLKLEIFMGGGKVSNNIAHATHLVVLIVPASDVD 872