BLASTX nr result

ID: Panax25_contig00031119 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00031119
         (388 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_010668010.1 PREDICTED: zinc finger BED domain-containing prot...    57   6e-07
XP_019106088.1 PREDICTED: zinc finger BED domain-containing prot...    57   8e-07
KCW80278.1 hypothetical protein EUGRSUZ_C01635 [Eucalyptus grandis]    56   1e-06
XP_018729959.1 PREDICTED: uncharacterized protein LOC104444289 [...    54   6e-06

>XP_010668010.1 PREDICTED: zinc finger BED domain-containing protein RICESLEEPER
           2-like [Beta vulgaris subsp. vulgaris]
          Length = 405

 Score = 57.0 bits (136), Expect = 6e-07
 Identities = 37/103 (35%), Positives = 52/103 (50%), Gaps = 2/103 (1%)
 Frame = +2

Query: 5   KFEKYWSDYVVILSIATILDPRYXXXXXXXXXXXXETDEYVINRKVEKIVDAMKSLFMEY 184
           KFEKYWSDY ++LS A +LDPR+              + Y  NR VE++ + +  LF EY
Sbjct: 222 KFEKYWSDYSLVLSCAAVLDPRFKLERVEYCYEKLFGEVYA-NRMVERVKNTLFDLFHEY 280

Query: 185 ATELSKDGSQQPQDGVGTSTIATT--NTNEHSDDEFDVSKVFM 307
             ++    S       GT T+A+   N  E  D+  D  KVF+
Sbjct: 281 -KDVHTSSSPNLATSSGTPTVASVVWNNGEQMDEILDY-KVFL 321


>XP_019106088.1 PREDICTED: zinc finger BED domain-containing protein RICESLEEPER
           1-like [Beta vulgaris subsp. vulgaris]
          Length = 547

 Score = 56.6 bits (135), Expect = 8e-07
 Identities = 37/103 (35%), Positives = 52/103 (50%), Gaps = 2/103 (1%)
 Frame = +2

Query: 5   KFEKYWSDYVVILSIATILDPRYXXXXXXXXXXXXETDEYVINRKVEKIVDAMKSLFMEY 184
           KFEKYWSDY ++LS A +LDPR+              + Y  NR VE++ + +  LF EY
Sbjct: 416 KFEKYWSDYSLVLSCAAVLDPRFKLERVEYCYEKLFGEVYA-NRMVERVKNTLFDLFDEY 474

Query: 185 ATELSKDGSQQPQDGVGTSTIATT--NTNEHSDDEFDVSKVFM 307
             ++    S       GT T+A+   N  E  D+  D  KVF+
Sbjct: 475 -KDVHTSSSPNLATSSGTPTVASVVGNNGEQMDEILDY-KVFL 515


>KCW80278.1 hypothetical protein EUGRSUZ_C01635 [Eucalyptus grandis]
          Length = 628

 Score = 56.2 bits (134), Expect = 1e-06
 Identities = 34/96 (35%), Positives = 47/96 (48%), Gaps = 1/96 (1%)
 Frame = +2

Query: 5   KFEKYWSDYVVILSIATILDPRYXXXXXXXXXXXXETDEYVINRKVEKIVDAMKSLFMEY 184
           KFEKYW  Y V+LS A ILDPRY            + D++V    V  I + + +LF EY
Sbjct: 413 KFEKYWKCYSVVLSFAVILDPRYKLHFLEFCYSKLDMDDHV--EFVRGIREKLYTLFDEY 470

Query: 185 ATELSKDGSQQPQDGVGTSTIATTNTNEHSD-DEFD 289
            T +S+D         G  ++   + N   D DE+D
Sbjct: 471 VTSMSRDDRSTSSTSRGNISVEGIDENIGDDIDEYD 506


>XP_018729959.1 PREDICTED: uncharacterized protein LOC104444289 [Eucalyptus
           grandis] XP_018729960.1 PREDICTED: uncharacterized
           protein LOC104444289 [Eucalyptus grandis] XP_018729961.1
           PREDICTED: uncharacterized protein LOC104444289
           [Eucalyptus grandis] XP_018729962.1 PREDICTED:
           uncharacterized protein LOC104444289 [Eucalyptus
           grandis] KCW72874.1 hypothetical protein EUGRSUZ_E01324
           [Eucalyptus grandis]
          Length = 662

 Score = 54.3 bits (129), Expect = 6e-06
 Identities = 33/96 (34%), Positives = 47/96 (48%), Gaps = 1/96 (1%)
 Frame = +2

Query: 5   KFEKYWSDYVVILSIATILDPRYXXXXXXXXXXXXETDEYVINRKVEKIVDAMKSLFMEY 184
           KF+KYW  Y V+LS A ILDPRY            + D++V    V  I + + +LF EY
Sbjct: 433 KFKKYWKCYSVVLSFAVILDPRYKLHLLEFCYSKLDMDDHV--EFVRSIREKLYTLFDEY 490

Query: 185 ATELSKDGSQQPQDGVGTSTIATTNTNEHSD-DEFD 289
            T +S+D         G  ++   + N   D DE+D
Sbjct: 491 VTSVSRDDCFTSSTSQGNISVEGIDENIGDDIDEYD 526


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