BLASTX nr result

ID: Panax25_contig00030488 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00030488
         (450 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_012078940.1 PREDICTED: mediator of RNA polymerase II transcri...   100   5e-25
XP_011094122.1 PREDICTED: mediator of RNA polymerase II transcri...   106   8e-24
CDP10383.1 unnamed protein product [Coffea canephora]                 103   7e-23
EYU29301.1 hypothetical protein MIMGU_mgv1a002570mg [Erythranthe...   102   1e-22
XP_012847192.1 PREDICTED: LOW QUALITY PROTEIN: mediator of RNA p...   102   1e-22
ALT31530.1 mediator of RNA polymerase II transcription subunit 1...   100   2e-22
XP_004251571.1 PREDICTED: mediator of RNA polymerase II transcri...   101   3e-22
XP_017248078.1 PREDICTED: mediator of RNA polymerase II transcri...   101   4e-22
KVI11780.1 Mediator complex, subunit Med17 [Cynara cardunculus v...   101   4e-22
XP_012078752.1 PREDICTED: mediator of RNA polymerase II transcri...   100   5e-22
XP_012078751.1 PREDICTED: mediator of RNA polymerase II transcri...   100   6e-22
XP_015059333.1 PREDICTED: mediator of RNA polymerase II transcri...   100   1e-21
XP_006364902.1 PREDICTED: mediator of RNA polymerase II transcri...   100   1e-21
XP_009601665.1 PREDICTED: mediator of RNA polymerase II transcri...   100   1e-21
XP_019246780.1 PREDICTED: mediator of RNA polymerase II transcri...   100   1e-21
XP_016512137.1 PREDICTED: mediator of RNA polymerase II transcri...   100   1e-21
XP_009781829.1 PREDICTED: mediator of RNA polymerase II transcri...   100   1e-21
JAU05711.1 Mediator of RNA polymerase II transcription subunit 1...   100   2e-21
XP_013730948.1 PREDICTED: mediator of RNA polymerase II transcri...    99   2e-21
CDX70919.1 BnaC03g10030D [Brassica napus]                              99   2e-21

>XP_012078940.1 PREDICTED: mediator of RNA polymerase II transcription subunit
           17-like [Jatropha curcas]
          Length = 94

 Score =  100 bits (250), Expect = 5e-25
 Identities = 45/55 (81%), Positives = 54/55 (98%)
 Frame = +1

Query: 238 MDGNMEISVDKLPIKRLEAIEENGAERFPSDVGYEEKRVNLIRRIDFAWALERED 402
           MDG +EIS+DKLP+KRLEAI+ENGAERFP+DVGY+EKRV+LIRRIDFAWA+E+ED
Sbjct: 1   MDGKIEISIDKLPVKRLEAIDENGAERFPTDVGYDEKRVSLIRRIDFAWAVEKED 55


>XP_011094122.1 PREDICTED: mediator of RNA polymerase II transcription subunit 17
           [Sesamum indicum]
          Length = 662

 Score =  106 bits (264), Expect = 8e-24
 Identities = 49/56 (87%), Positives = 55/56 (98%)
 Frame = +1

Query: 238 MDGNMEISVDKLPIKRLEAIEENGAERFPSDVGYEEKRVNLIRRIDFAWALEREDP 405
           MDG++EIS+DKLPIKRLEA+EENG ERFPSDVGY+EKRVNLIRRIDFAWA+EREDP
Sbjct: 1   MDGDLEISLDKLPIKRLEALEENGFERFPSDVGYDEKRVNLIRRIDFAWAVEREDP 56


>CDP10383.1 unnamed protein product [Coffea canephora]
          Length = 665

 Score =  103 bits (257), Expect = 7e-23
 Identities = 47/56 (83%), Positives = 54/56 (96%)
 Frame = +1

Query: 238 MDGNMEISVDKLPIKRLEAIEENGAERFPSDVGYEEKRVNLIRRIDFAWALEREDP 405
           MDGN++IS+DKLPIKRLE IEENG ERFPSDVG+EEKRV+LIRRIDFAWA+ERE+P
Sbjct: 1   MDGNLDISIDKLPIKRLEVIEENGVERFPSDVGHEEKRVDLIRRIDFAWAVEREEP 56


>EYU29301.1 hypothetical protein MIMGU_mgv1a002570mg [Erythranthe guttata]
          Length = 657

 Score =  102 bits (255), Expect = 1e-22
 Identities = 48/56 (85%), Positives = 54/56 (96%)
 Frame = +1

Query: 238 MDGNMEISVDKLPIKRLEAIEENGAERFPSDVGYEEKRVNLIRRIDFAWALEREDP 405
           MDGN+EIS+DKLPIKRLE+IEE G+ERFPSDV Y+EKRVNLIRRIDFAWA+EREDP
Sbjct: 1   MDGNLEISLDKLPIKRLESIEEFGSERFPSDVDYDEKRVNLIRRIDFAWAVEREDP 56


>XP_012847192.1 PREDICTED: LOW QUALITY PROTEIN: mediator of RNA polymerase II
           transcription subunit 17 [Erythranthe guttata]
          Length = 660

 Score =  102 bits (255), Expect = 1e-22
 Identities = 48/56 (85%), Positives = 54/56 (96%)
 Frame = +1

Query: 238 MDGNMEISVDKLPIKRLEAIEENGAERFPSDVGYEEKRVNLIRRIDFAWALEREDP 405
           MDGN+EIS+DKLPIKRLE+IEE G+ERFPSDV Y+EKRVNLIRRIDFAWA+EREDP
Sbjct: 1   MDGNLEISLDKLPIKRLESIEEFGSERFPSDVDYDEKRVNLIRRIDFAWAVEREDP 56


>ALT31530.1 mediator of RNA polymerase II transcription subunit 17-like
           protein, partial [Rehmannia glutinosa]
          Length = 339

 Score =  100 bits (249), Expect = 2e-22
 Identities = 48/56 (85%), Positives = 54/56 (96%)
 Frame = +1

Query: 238 MDGNMEISVDKLPIKRLEAIEENGAERFPSDVGYEEKRVNLIRRIDFAWALEREDP 405
           MDG++ IS+DKLPIKRLEAIEENG ERFPSDVGY+EKRVNLIRRIDFA+A+EREDP
Sbjct: 1   MDGDLGISLDKLPIKRLEAIEENGFERFPSDVGYDEKRVNLIRRIDFAFAVEREDP 56


>XP_004251571.1 PREDICTED: mediator of RNA polymerase II transcription subunit 17
           [Solanum lycopersicum]
          Length = 663

 Score =  101 bits (252), Expect = 3e-22
 Identities = 47/56 (83%), Positives = 53/56 (94%)
 Frame = +1

Query: 238 MDGNMEISVDKLPIKRLEAIEENGAERFPSDVGYEEKRVNLIRRIDFAWALEREDP 405
           M+GN+EISVDKLPIKRLE IEE GAERFPSD+GY+EK VNLIRRIDFAWA+ERE+P
Sbjct: 1   MNGNLEISVDKLPIKRLEYIEEQGAERFPSDIGYDEKTVNLIRRIDFAWAVEREEP 56


>XP_017248078.1 PREDICTED: mediator of RNA polymerase II transcription subunit 17
           [Daucus carota subsp. sativus]
          Length = 659

 Score =  101 bits (251), Expect = 4e-22
 Identities = 46/55 (83%), Positives = 53/55 (96%)
 Frame = +1

Query: 238 MDGNMEISVDKLPIKRLEAIEENGAERFPSDVGYEEKRVNLIRRIDFAWALERED 402
           MDGNMEISVDKLPIKRLE+IEENGAERFP++VGYEE+R+NLI RIDF WA++RED
Sbjct: 1   MDGNMEISVDKLPIKRLESIEENGAERFPNEVGYEERRLNLIHRIDFGWAVDRED 55


>KVI11780.1 Mediator complex, subunit Med17 [Cynara cardunculus var. scolymus]
          Length = 715

 Score =  101 bits (251), Expect = 4e-22
 Identities = 45/64 (70%), Positives = 56/64 (87%)
 Frame = +1

Query: 214 IPPKIAGKMDGNMEISVDKLPIKRLEAIEENGAERFPSDVGYEEKRVNLIRRIDFAWALE 393
           +P   + +MDG++ IS+DKLP+KRLEAIEENGAERFP D+ Y++ RVNLIRRIDFAWA+E
Sbjct: 50  VPRNTSEEMDGDLSISLDKLPVKRLEAIEENGAERFPPDLSYDDNRVNLIRRIDFAWAVE 109

Query: 394 REDP 405
           REDP
Sbjct: 110 REDP 113


>XP_012078752.1 PREDICTED: mediator of RNA polymerase II transcription subunit
           17-like isoform X2 [Jatropha curcas]
          Length = 568

 Score =  100 bits (250), Expect = 5e-22
 Identities = 45/55 (81%), Positives = 54/55 (98%)
 Frame = +1

Query: 238 MDGNMEISVDKLPIKRLEAIEENGAERFPSDVGYEEKRVNLIRRIDFAWALERED 402
           MDG +EIS+DKLP+KRLEAI+ENGAERFP+DVGY+EKRV+LIRRIDFAWA+E+ED
Sbjct: 1   MDGKIEISIDKLPVKRLEAIDENGAERFPTDVGYDEKRVSLIRRIDFAWAVEKED 55


>XP_012078751.1 PREDICTED: mediator of RNA polymerase II transcription subunit
           17-like isoform X1 [Jatropha curcas] KDP32381.1
           hypothetical protein JCGZ_13306 [Jatropha curcas]
          Length = 664

 Score =  100 bits (250), Expect = 6e-22
 Identities = 45/55 (81%), Positives = 54/55 (98%)
 Frame = +1

Query: 238 MDGNMEISVDKLPIKRLEAIEENGAERFPSDVGYEEKRVNLIRRIDFAWALERED 402
           MDG +EIS+DKLP+KRLEAI+ENGAERFP+DVGY+EKRV+LIRRIDFAWA+E+ED
Sbjct: 1   MDGKIEISIDKLPVKRLEAIDENGAERFPTDVGYDEKRVSLIRRIDFAWAVEKED 55


>XP_015059333.1 PREDICTED: mediator of RNA polymerase II transcription subunit 17
           isoform X2 [Solanum pennellii]
          Length = 663

 Score = 99.8 bits (247), Expect = 1e-21
 Identities = 46/56 (82%), Positives = 53/56 (94%)
 Frame = +1

Query: 238 MDGNMEISVDKLPIKRLEAIEENGAERFPSDVGYEEKRVNLIRRIDFAWALEREDP 405
           M+G++EISVDKLPIKRLE IEE GAERFPSD+GY+EK VNLIRRIDFAWA+ERE+P
Sbjct: 1   MNGDLEISVDKLPIKRLEYIEEQGAERFPSDIGYDEKTVNLIRRIDFAWAVEREEP 56


>XP_006364902.1 PREDICTED: mediator of RNA polymerase II transcription subunit 17
           [Solanum tuberosum]
          Length = 663

 Score = 99.8 bits (247), Expect = 1e-21
 Identities = 46/56 (82%), Positives = 53/56 (94%)
 Frame = +1

Query: 238 MDGNMEISVDKLPIKRLEAIEENGAERFPSDVGYEEKRVNLIRRIDFAWALEREDP 405
           M+G++EISVDKLPIKRLE IEE GAERFPSD+GY+EK VNLIRRIDFAWA+ERE+P
Sbjct: 1   MNGDLEISVDKLPIKRLEFIEEQGAERFPSDIGYDEKTVNLIRRIDFAWAVEREEP 56


>XP_009601665.1 PREDICTED: mediator of RNA polymerase II transcription subunit 17
           [Nicotiana tomentosiformis] XP_016466403.1 PREDICTED:
           mediator of RNA polymerase II transcription subunit
           17-like [Nicotiana tabacum]
          Length = 668

 Score = 99.8 bits (247), Expect = 1e-21
 Identities = 46/56 (82%), Positives = 53/56 (94%)
 Frame = +1

Query: 238 MDGNMEISVDKLPIKRLEAIEENGAERFPSDVGYEEKRVNLIRRIDFAWALEREDP 405
           M+G++EISVDKLPIKRLE IEE GAERFPSD+GY+EK VNLIRRIDFAWA+ERE+P
Sbjct: 1   MNGDLEISVDKLPIKRLEFIEEKGAERFPSDIGYDEKTVNLIRRIDFAWAVEREEP 56


>XP_019246780.1 PREDICTED: mediator of RNA polymerase II transcription subunit 17
           [Nicotiana attenuata] OIT01560.1 mediator of rna
           polymerase ii transcription subunit 17 [Nicotiana
           attenuata]
          Length = 671

 Score = 99.8 bits (247), Expect = 1e-21
 Identities = 46/56 (82%), Positives = 53/56 (94%)
 Frame = +1

Query: 238 MDGNMEISVDKLPIKRLEAIEENGAERFPSDVGYEEKRVNLIRRIDFAWALEREDP 405
           M+G++EISVDKLPIKRLE IEE GAERFPSD+GY+EK VNLIRRIDFAWA+ERE+P
Sbjct: 1   MNGDLEISVDKLPIKRLEFIEEGGAERFPSDIGYDEKTVNLIRRIDFAWAVEREEP 56


>XP_016512137.1 PREDICTED: mediator of RNA polymerase II transcription subunit
           17-like [Nicotiana tabacum]
          Length = 671

 Score = 99.8 bits (247), Expect = 1e-21
 Identities = 46/56 (82%), Positives = 53/56 (94%)
 Frame = +1

Query: 238 MDGNMEISVDKLPIKRLEAIEENGAERFPSDVGYEEKRVNLIRRIDFAWALEREDP 405
           M+G++EISVDKLPIKRLE IEE GAERFPSD+GY+EK VNLIRRIDFAWA+ERE+P
Sbjct: 1   MNGDLEISVDKLPIKRLEFIEEGGAERFPSDIGYDEKTVNLIRRIDFAWAVEREEP 56


>XP_009781829.1 PREDICTED: mediator of RNA polymerase II transcription subunit 17
           [Nicotiana sylvestris]
          Length = 671

 Score = 99.8 bits (247), Expect = 1e-21
 Identities = 46/56 (82%), Positives = 53/56 (94%)
 Frame = +1

Query: 238 MDGNMEISVDKLPIKRLEAIEENGAERFPSDVGYEEKRVNLIRRIDFAWALEREDP 405
           M+G++EISVDKLPIKRLE IEE GAERFPSD+GY+EK VNLIRRIDFAWA+ERE+P
Sbjct: 1   MNGDLEISVDKLPIKRLEFIEEGGAERFPSDIGYDEKTVNLIRRIDFAWAVEREEP 56


>JAU05711.1 Mediator of RNA polymerase II transcription subunit 17, partial
           [Noccaea caerulescens]
          Length = 678

 Score = 99.8 bits (247), Expect = 2e-21
 Identities = 46/56 (82%), Positives = 54/56 (96%)
 Frame = +1

Query: 235 KMDGNMEISVDKLPIKRLEAIEENGAERFPSDVGYEEKRVNLIRRIDFAWALERED 402
           +MD +MEIS+D+LPIKRLE+IEENGAERFPSDVGY++KRV+LIRRIDFAWALE ED
Sbjct: 27  EMDSDMEISLDRLPIKRLESIEENGAERFPSDVGYDDKRVSLIRRIDFAWALEEED 82


>XP_013730948.1 PREDICTED: mediator of RNA polymerase II transcription subunit 17
           isoform X2 [Brassica napus]
          Length = 644

 Score = 99.4 bits (246), Expect = 2e-21
 Identities = 46/55 (83%), Positives = 53/55 (96%)
 Frame = +1

Query: 238 MDGNMEISVDKLPIKRLEAIEENGAERFPSDVGYEEKRVNLIRRIDFAWALERED 402
           MD +MEIS+D+LPIKRLE+IEENGAERFPSDVGY++KRV+LIRRIDFAWALE ED
Sbjct: 1   MDSDMEISLDRLPIKRLESIEENGAERFPSDVGYDDKRVSLIRRIDFAWALEEED 55


>CDX70919.1 BnaC03g10030D [Brassica napus]
          Length = 644

 Score = 99.4 bits (246), Expect = 2e-21
 Identities = 46/55 (83%), Positives = 53/55 (96%)
 Frame = +1

Query: 238 MDGNMEISVDKLPIKRLEAIEENGAERFPSDVGYEEKRVNLIRRIDFAWALERED 402
           MD +MEIS+D+LPIKRLE+IEENGAERFPSDVGY++KRV+LIRRIDFAWALE ED
Sbjct: 1   MDSDMEISLDRLPIKRLESIEENGAERFPSDVGYDDKRVSLIRRIDFAWALEEED 55


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