BLASTX nr result
ID: Panax25_contig00030445
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax25_contig00030445
(365 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_007036533.2 PREDICTED: CRM-domain containing factor CFM3, chl... 113 1e-26
EOY21034.1 CRS1 / YhbY domain-containing protein [Theobroma cacao] 113 1e-26
XP_011072348.1 PREDICTED: chloroplastic group IIA intron splicin... 111 4e-26
XP_019243905.1 PREDICTED: CRM-domain containing factor CFM3, chl... 110 7e-26
XP_017241878.1 PREDICTED: CRM-domain containing factor CFM3, chl... 110 7e-26
XP_012440292.1 PREDICTED: chloroplastic group IIA intron splicin... 110 7e-26
XP_012440291.1 PREDICTED: chloroplastic group IIA intron splicin... 110 7e-26
XP_017637137.1 PREDICTED: CRM-domain containing factor CFM3, chl... 110 7e-26
XP_012440290.1 PREDICTED: chloroplastic group IIA intron splicin... 110 7e-26
KZN03411.1 hypothetical protein DCAR_012167 [Daucus carota subsp... 110 7e-26
KHG01961.1 Chloroplastic group IIA intron splicing facilitator C... 110 9e-26
XP_009767017.1 PREDICTED: chloroplastic group IIA intron splicin... 110 9e-26
GAV69270.1 CRS1_YhbY domain-containing protein [Cephalotus folli... 110 1e-25
XP_016718281.1 PREDICTED: CRM-domain containing factor CFM3, chl... 110 1e-25
XP_016503563.1 PREDICTED: CRM-domain containing factor CFM3, chl... 109 2e-25
XP_009614576.1 PREDICTED: CRM-domain containing factor CFM3, chl... 109 2e-25
XP_010094746.1 Chloroplastic group IIA intron splicing facilitat... 109 2e-25
OMO96033.1 hypothetical protein CCACVL1_05105 [Corchorus capsula... 108 4e-25
XP_011045860.1 PREDICTED: chloroplastic group IIA intron splicin... 107 8e-25
XP_011045859.1 PREDICTED: chloroplastic group IIA intron splicin... 107 8e-25
>XP_007036533.2 PREDICTED: CRM-domain containing factor CFM3,
chloroplastic/mitochondrial [Theobroma cacao]
Length = 854
Score = 113 bits (282), Expect = 1e-26
Identities = 61/94 (64%), Positives = 72/94 (76%), Gaps = 4/94 (4%)
Frame = -1
Query: 362 KPIVTDPDKS--MTEEEAEFNNLL--VGPSRYDDWWGTRILAVPIDAD*LA*KIPGYKTP 195
+P+V P++S MTEEEAE+N+LL VGP R+ +WWGT +L P+DAD L KIPGYKTP
Sbjct: 347 EPVVVKPERSESMTEEEAEYNSLLDGVGP-RFVEWWGTGVL--PVDADLLPQKIPGYKTP 403
Query: 194 FRLLPTGM*PRLTNVGMTNLGNIAKSLPRHFAFG 93
FRLLP GM PRLTN MTNL +AKSLP HFA G
Sbjct: 404 FRLLPAGMRPRLTNAEMTNLRKLAKSLPCHFALG 437
>EOY21034.1 CRS1 / YhbY domain-containing protein [Theobroma cacao]
Length = 919
Score = 113 bits (282), Expect = 1e-26
Identities = 61/94 (64%), Positives = 72/94 (76%), Gaps = 4/94 (4%)
Frame = -1
Query: 362 KPIVTDPDKS--MTEEEAEFNNLL--VGPSRYDDWWGTRILAVPIDAD*LA*KIPGYKTP 195
+P+V P++S MTEEEAE+N+LL VGP R+ +WWGT +L P+DAD L KIPGYKTP
Sbjct: 412 EPVVVKPERSESMTEEEAEYNSLLDGVGP-RFVEWWGTGVL--PVDADLLPQKIPGYKTP 468
Query: 194 FRLLPTGM*PRLTNVGMTNLGNIAKSLPRHFAFG 93
FRLLP GM PRLTN MTNL +AKSLP HFA G
Sbjct: 469 FRLLPAGMRPRLTNAEMTNLRKLAKSLPCHFALG 502
>XP_011072348.1 PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic [Sesamum indicum]
Length = 821
Score = 111 bits (278), Expect = 4e-26
Identities = 58/93 (62%), Positives = 70/93 (75%), Gaps = 2/93 (2%)
Frame = -1
Query: 365 SKPIVTDPDKSMTEEEAEFNNLL--VGPSRYDDWWGTRILAVPIDAD*LA*KIPGYKTPF 192
S P+++ +SM+EEEAE+N LL +GP R++DWWGT +L P+DAD L IPGYKTPF
Sbjct: 344 SNPVISARAESMSEEEAEYNRLLDGLGP-RFEDWWGTGVL--PVDADLLPQTIPGYKTPF 400
Query: 191 RLLPTGM*PRLTNVGMTNLGNIAKSLPRHFAFG 93
RLLP GM PRLTN MTNL +AKSLP HFA G
Sbjct: 401 RLLPAGMRPRLTNAEMTNLRKLAKSLPCHFALG 433
>XP_019243905.1 PREDICTED: CRM-domain containing factor CFM3,
chloroplastic/mitochondrial [Nicotiana attenuata]
XP_019243906.1 PREDICTED: CRM-domain containing factor
CFM3, chloroplastic/mitochondrial [Nicotiana attenuata]
OIT05111.1 crm-domain containing factor cfm3,
chloroplasticmitochondrial [Nicotiana attenuata]
Length = 833
Score = 110 bits (276), Expect = 7e-26
Identities = 60/84 (71%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 338 KSMTEEEAEFNNLL--VGPSRYDDWWGTRILAVPIDAD*LA*KIPGYKTPFRLLPTGM*P 165
+SMTEEEAEFN LL +GP RY+DWWGT +L P+DAD L IPGYKTPFRLLPTGM
Sbjct: 362 QSMTEEEAEFNRLLDGLGP-RYEDWWGTGVL--PVDADLLPQTIPGYKTPFRLLPTGMRS 418
Query: 164 RLTNVGMTNLGNIAKSLPRHFAFG 93
RLTN MTNL IAKSLP HFA G
Sbjct: 419 RLTNAEMTNLRKIAKSLPCHFALG 442
>XP_017241878.1 PREDICTED: CRM-domain containing factor CFM3,
chloroplastic/mitochondrial [Daucus carota subsp.
sativus]
Length = 840
Score = 110 bits (276), Expect = 7e-26
Identities = 59/83 (71%), Positives = 65/83 (78%), Gaps = 2/83 (2%)
Frame = -1
Query: 335 SMTEEEAEFNNLL--VGPSRYDDWWGTRILAVPIDAD*LA*KIPGYKTPFRLLPTGM*PR 162
SM+EEE FNNLL +GP R++DWWGT IL P+DAD L KIPGYKTPFRLLPTGM PR
Sbjct: 340 SMSEEETAFNNLLDGLGP-RFEDWWGTGIL--PVDADLLPQKIPGYKTPFRLLPTGMRPR 396
Query: 161 LTNVGMTNLGNIAKSLPRHFAFG 93
LTN MTNL +AKSLP HFA G
Sbjct: 397 LTNAEMTNLRKLAKSLPCHFALG 419
>XP_012440292.1 PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic isoform X3 [Gossypium raimondii]
Length = 854
Score = 110 bits (276), Expect = 7e-26
Identities = 62/95 (65%), Positives = 71/95 (74%), Gaps = 4/95 (4%)
Frame = -1
Query: 365 SKPIVTDPDKS--MTEEEAEFNNLL--VGPSRYDDWWGTRILAVPIDAD*LA*KIPGYKT 198
S +V P++S MTEEEAE+N+LL +GP R+ +WWGT IL P+DAD L KIPGYKT
Sbjct: 335 SDKVVVKPERSESMTEEEAEYNSLLDGLGP-RFVEWWGTGIL--PVDADLLPPKIPGYKT 391
Query: 197 PFRLLPTGM*PRLTNVGMTNLGNIAKSLPRHFAFG 93
PFRLLP GM PRLTN MTNL IAKSLP HFA G
Sbjct: 392 PFRLLPAGMRPRLTNAEMTNLRKIAKSLPCHFALG 426
>XP_012440291.1 PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic isoform X2 [Gossypium raimondii]
Length = 854
Score = 110 bits (276), Expect = 7e-26
Identities = 62/95 (65%), Positives = 71/95 (74%), Gaps = 4/95 (4%)
Frame = -1
Query: 365 SKPIVTDPDKS--MTEEEAEFNNLL--VGPSRYDDWWGTRILAVPIDAD*LA*KIPGYKT 198
S +V P++S MTEEEAE+N+LL +GP R+ +WWGT IL P+DAD L KIPGYKT
Sbjct: 335 SDKVVVKPERSESMTEEEAEYNSLLDGLGP-RFVEWWGTGIL--PVDADLLPPKIPGYKT 391
Query: 197 PFRLLPTGM*PRLTNVGMTNLGNIAKSLPRHFAFG 93
PFRLLP GM PRLTN MTNL IAKSLP HFA G
Sbjct: 392 PFRLLPAGMRPRLTNAEMTNLRKIAKSLPCHFALG 426
>XP_017637137.1 PREDICTED: CRM-domain containing factor CFM3,
chloroplastic/mitochondrial [Gossypium arboreum]
Length = 855
Score = 110 bits (276), Expect = 7e-26
Identities = 62/95 (65%), Positives = 71/95 (74%), Gaps = 4/95 (4%)
Frame = -1
Query: 365 SKPIVTDPDKS--MTEEEAEFNNLL--VGPSRYDDWWGTRILAVPIDAD*LA*KIPGYKT 198
S +V P++S MTEEEAE+N+LL +GP R+ +WWGT IL P+DAD L KIPGYKT
Sbjct: 336 SDKVVVKPERSESMTEEEAEYNSLLDGLGP-RFVEWWGTGIL--PVDADLLPPKIPGYKT 392
Query: 197 PFRLLPTGM*PRLTNVGMTNLGNIAKSLPRHFAFG 93
PFRLLP GM PRLTN MTNL IAKSLP HFA G
Sbjct: 393 PFRLLPAGMRPRLTNAEMTNLRKIAKSLPCHFALG 427
>XP_012440290.1 PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic isoform X1 [Gossypium raimondii]
KJB52985.1 hypothetical protein B456_008G286900
[Gossypium raimondii]
Length = 868
Score = 110 bits (276), Expect = 7e-26
Identities = 62/95 (65%), Positives = 71/95 (74%), Gaps = 4/95 (4%)
Frame = -1
Query: 365 SKPIVTDPDKS--MTEEEAEFNNLL--VGPSRYDDWWGTRILAVPIDAD*LA*KIPGYKT 198
S +V P++S MTEEEAE+N+LL +GP R+ +WWGT IL P+DAD L KIPGYKT
Sbjct: 335 SDKVVVKPERSESMTEEEAEYNSLLDGLGP-RFVEWWGTGIL--PVDADLLPPKIPGYKT 391
Query: 197 PFRLLPTGM*PRLTNVGMTNLGNIAKSLPRHFAFG 93
PFRLLP GM PRLTN MTNL IAKSLP HFA G
Sbjct: 392 PFRLLPAGMRPRLTNAEMTNLRKIAKSLPCHFALG 426
>KZN03411.1 hypothetical protein DCAR_012167 [Daucus carota subsp. sativus]
Length = 1266
Score = 110 bits (276), Expect = 7e-26
Identities = 59/83 (71%), Positives = 65/83 (78%), Gaps = 2/83 (2%)
Frame = -1
Query: 335 SMTEEEAEFNNLL--VGPSRYDDWWGTRILAVPIDAD*LA*KIPGYKTPFRLLPTGM*PR 162
SM+EEE FNNLL +GP R++DWWGT IL P+DAD L KIPGYKTPFRLLPTGM PR
Sbjct: 335 SMSEEETAFNNLLDGLGP-RFEDWWGTGIL--PVDADLLPQKIPGYKTPFRLLPTGMRPR 391
Query: 161 LTNVGMTNLGNIAKSLPRHFAFG 93
LTN MTNL +AKSLP HFA G
Sbjct: 392 LTNAEMTNLRKLAKSLPCHFALG 414
>KHG01961.1 Chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic [Gossypium arboreum]
Length = 823
Score = 110 bits (275), Expect = 9e-26
Identities = 62/95 (65%), Positives = 71/95 (74%), Gaps = 4/95 (4%)
Frame = -1
Query: 365 SKPIVTDPD--KSMTEEEAEFNNLL--VGPSRYDDWWGTRILAVPIDAD*LA*KIPGYKT 198
S +V P+ +SMTEEEAE+N+LL +GP R+ +WWGT IL P+DAD L KIPGYKT
Sbjct: 336 SDKVVVKPECSESMTEEEAEYNSLLDGLGP-RFVEWWGTGIL--PVDADLLPPKIPGYKT 392
Query: 197 PFRLLPTGM*PRLTNVGMTNLGNIAKSLPRHFAFG 93
PFRLLP GM PRLTN MTNL IAKSLP HFA G
Sbjct: 393 PFRLLPAGMRPRLTNAEMTNLRKIAKSLPCHFALG 427
>XP_009767017.1 PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic [Nicotiana sylvestris]
XP_009767027.1 PREDICTED: chloroplastic group IIA intron
splicing facilitator CRS1, chloroplastic [Nicotiana
sylvestris] XP_016479052.1 PREDICTED: CRM-domain
containing factor CFM3, chloroplastic/mitochondrial-like
[Nicotiana tabacum] XP_016479053.1 PREDICTED: CRM-domain
containing factor CFM3, chloroplastic/mitochondrial-like
[Nicotiana tabacum]
Length = 831
Score = 110 bits (275), Expect = 9e-26
Identities = 59/84 (70%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 338 KSMTEEEAEFNNLL--VGPSRYDDWWGTRILAVPIDAD*LA*KIPGYKTPFRLLPTGM*P 165
+SMTEEEAEFN LL +GP RY+DWWGT + +P+DAD L IPGYKTPFRLLPTGM
Sbjct: 363 QSMTEEEAEFNRLLDGLGP-RYEDWWGTGV--IPVDADLLPQTIPGYKTPFRLLPTGMRS 419
Query: 164 RLTNVGMTNLGNIAKSLPRHFAFG 93
RLTN MTNL IAKSLP HFA G
Sbjct: 420 RLTNAEMTNLRKIAKSLPCHFALG 443
>GAV69270.1 CRS1_YhbY domain-containing protein [Cephalotus follicularis]
Length = 838
Score = 110 bits (274), Expect = 1e-25
Identities = 60/95 (63%), Positives = 73/95 (76%), Gaps = 4/95 (4%)
Frame = -1
Query: 365 SKPIVTDPDK--SMTEEEAEFNNLL--VGPSRYDDWWGTRILAVPIDAD*LA*KIPGYKT 198
S+P V P++ SMTEEEA++N+LL +GP R+++WWGT +L P+DAD L KIPGYKT
Sbjct: 343 SEPTVRIPNRNESMTEEEADYNSLLDCLGP-RFEEWWGTGVL--PVDADLLPQKIPGYKT 399
Query: 197 PFRLLPTGM*PRLTNVGMTNLGNIAKSLPRHFAFG 93
PFRLLPTGM RLTN MTNL +AKSLP HFA G
Sbjct: 400 PFRLLPTGMRSRLTNAEMTNLRKLAKSLPCHFALG 434
>XP_016718281.1 PREDICTED: CRM-domain containing factor CFM3,
chloroplastic/mitochondrial [Gossypium hirsutum]
Length = 855
Score = 110 bits (274), Expect = 1e-25
Identities = 62/95 (65%), Positives = 71/95 (74%), Gaps = 4/95 (4%)
Frame = -1
Query: 365 SKPIVTDPDKS--MTEEEAEFNNLL--VGPSRYDDWWGTRILAVPIDAD*LA*KIPGYKT 198
S +V P++S MTEEEAE+N+LL +GP R+ +WWGT IL P+DAD L KIPGYKT
Sbjct: 336 SDKVVVKPERSESMTEEEAEYNSLLDGLGP-RFVEWWGTGIL--PVDADLLPPKIPGYKT 392
Query: 197 PFRLLPTGM*PRLTNVGMTNLGNIAKSLPRHFAFG 93
PFRLLP GM PRLTN MTNL IAKSLP HFA G
Sbjct: 393 PFRLLPAGMRPRLTNSEMTNLRKIAKSLPCHFALG 427
>XP_016503563.1 PREDICTED: CRM-domain containing factor CFM3,
chloroplastic/mitochondrial-like [Nicotiana tabacum]
Length = 832
Score = 109 bits (273), Expect = 2e-25
Identities = 59/84 (70%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 338 KSMTEEEAEFNNLL--VGPSRYDDWWGTRILAVPIDAD*LA*KIPGYKTPFRLLPTGM*P 165
++MTEEEAEFN LL +GP RY+DWWGT +L P+DAD L IPGYKTPFRLLPTGM
Sbjct: 361 QNMTEEEAEFNRLLDGLGP-RYEDWWGTGVL--PVDADLLPQTIPGYKTPFRLLPTGMRS 417
Query: 164 RLTNVGMTNLGNIAKSLPRHFAFG 93
RLTN MTNL IAKSLP HFA G
Sbjct: 418 RLTNAEMTNLRKIAKSLPCHFALG 441
>XP_009614576.1 PREDICTED: CRM-domain containing factor CFM3,
chloroplastic/mitochondrial [Nicotiana tomentosiformis]
Length = 834
Score = 109 bits (273), Expect = 2e-25
Identities = 59/84 (70%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 338 KSMTEEEAEFNNLL--VGPSRYDDWWGTRILAVPIDAD*LA*KIPGYKTPFRLLPTGM*P 165
++MTEEEAEFN LL +GP RY+DWWGT +L P+DAD L IPGYKTPFRLLPTGM
Sbjct: 363 QNMTEEEAEFNRLLDGLGP-RYEDWWGTGVL--PVDADLLPQTIPGYKTPFRLLPTGMRS 419
Query: 164 RLTNVGMTNLGNIAKSLPRHFAFG 93
RLTN MTNL IAKSLP HFA G
Sbjct: 420 RLTNAEMTNLRKIAKSLPCHFALG 443
>XP_010094746.1 Chloroplastic group IIA intron splicing facilitator CRS1 [Morus
notabilis] EXB56911.1 Chloroplastic group IIA intron
splicing facilitator CRS1 [Morus notabilis]
Length = 838
Score = 109 bits (273), Expect = 2e-25
Identities = 57/84 (67%), Positives = 67/84 (79%), Gaps = 2/84 (2%)
Frame = -1
Query: 338 KSMTEEEAEFNNLL--VGPSRYDDWWGTRILAVPIDAD*LA*KIPGYKTPFRLLPTGM*P 165
++MTEEEAEFN+LL +GP R+D+WWGT + +P+DAD L KIPGYKTPFRLLPTGM
Sbjct: 366 QNMTEEEAEFNSLLDDLGP-RFDEWWGTGV--IPVDADLLPPKIPGYKTPFRLLPTGMRS 422
Query: 164 RLTNVGMTNLGNIAKSLPRHFAFG 93
RLTN MTNL +AKSLP HFA G
Sbjct: 423 RLTNGEMTNLRKVAKSLPSHFALG 446
>OMO96033.1 hypothetical protein CCACVL1_05105 [Corchorus capsularis]
Length = 836
Score = 108 bits (270), Expect = 4e-25
Identities = 59/95 (62%), Positives = 71/95 (74%), Gaps = 4/95 (4%)
Frame = -1
Query: 365 SKPIVTDPD--KSMTEEEAEFNNLL--VGPSRYDDWWGTRILAVPIDAD*LA*KIPGYKT 198
S+ + P+ +SMTEEEAE+N+LL +GP R+ +WWGT +L P+DAD L K+PGYKT
Sbjct: 337 SERVAVKPENAESMTEEEAEYNSLLDGLGP-RFVEWWGTGVL--PVDADLLPEKVPGYKT 393
Query: 197 PFRLLPTGM*PRLTNVGMTNLGNIAKSLPRHFAFG 93
PFRLLP GM PRLTN MTNL IAKSLP HFA G
Sbjct: 394 PFRLLPAGMRPRLTNAEMTNLRKIAKSLPCHFALG 428
>XP_011045860.1 PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic isoform X2 [Populus euphratica]
Length = 802
Score = 107 bits (268), Expect = 8e-25
Identities = 54/89 (60%), Positives = 69/89 (77%), Gaps = 2/89 (2%)
Frame = -1
Query: 353 VTDPDKSMTEEEAEFNNLL--VGPSRYDDWWGTRILAVPIDAD*LA*KIPGYKTPFRLLP 180
+T+P ++MTEEEAE N+LL +GP R+++WWGT +L P+DAD L K+PGYKTPFRLLP
Sbjct: 337 ITEPTENMTEEEAELNSLLDGLGP-RFEEWWGTGLL--PVDADLLPPKVPGYKTPFRLLP 393
Query: 179 TGM*PRLTNVGMTNLGNIAKSLPRHFAFG 93
GM RLTN MTN+ +AK+LP HFA G
Sbjct: 394 VGMRARLTNAEMTNMRKLAKALPCHFALG 422
>XP_011045859.1 PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic isoform X1 [Populus euphratica]
Length = 806
Score = 107 bits (268), Expect = 8e-25
Identities = 54/89 (60%), Positives = 69/89 (77%), Gaps = 2/89 (2%)
Frame = -1
Query: 353 VTDPDKSMTEEEAEFNNLL--VGPSRYDDWWGTRILAVPIDAD*LA*KIPGYKTPFRLLP 180
+T+P ++MTEEEAE N+LL +GP R+++WWGT +L P+DAD L K+PGYKTPFRLLP
Sbjct: 337 ITEPTENMTEEEAELNSLLDGLGP-RFEEWWGTGLL--PVDADLLPPKVPGYKTPFRLLP 393
Query: 179 TGM*PRLTNVGMTNLGNIAKSLPRHFAFG 93
GM RLTN MTN+ +AK+LP HFA G
Sbjct: 394 VGMRARLTNAEMTNMRKLAKALPCHFALG 422