BLASTX nr result
ID: Panax25_contig00029885
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax25_contig00029885
(483 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_012447255.1 PREDICTED: retinoblastoma-related protein isoform... 62 4e-08
GAV86714.1 RB_B domain-containing protein/RB_A domain-containing... 61 8e-08
OAY54738.1 hypothetical protein MANES_03G097800 [Manihot esculen... 60 1e-07
Q4JF75.1 RecName: Full=Retinoblastoma-related protein BAE06273.1... 60 1e-07
XP_016686249.1 PREDICTED: retinoblastoma-related protein-like is... 60 2e-07
XP_010648448.1 PREDICTED: retinoblastoma-related protein isoform... 60 2e-07
A7P514.1 RecName: Full=Retinoblastoma-related protein AEV45768.1... 60 2e-07
XP_010648447.1 PREDICTED: retinoblastoma-related protein isoform... 60 2e-07
XP_019075076.1 PREDICTED: retinoblastoma-related protein isoform... 60 2e-07
XP_019075075.1 PREDICTED: retinoblastoma-related protein isoform... 60 2e-07
XP_008446983.1 PREDICTED: retinoblastoma-related protein [Cucumi... 60 2e-07
XP_004142479.1 PREDICTED: retinoblastoma-related protein isoform... 60 2e-07
XP_011655942.1 PREDICTED: retinoblastoma-related protein isoform... 60 2e-07
XP_012447258.1 PREDICTED: retinoblastoma-related protein isoform... 59 3e-07
KJB60298.1 hypothetical protein B456_009G299000 [Gossypium raimo... 59 3e-07
XP_012447257.1 PREDICTED: retinoblastoma-related protein isoform... 59 3e-07
XP_012447256.1 PREDICTED: retinoblastoma-related protein isoform... 59 3e-07
OMO51320.1 Retinoblastoma-associated protein, B-box [Corchorus c... 59 3e-07
OMO87219.1 Retinoblastoma-associated protein, B-box [Corchorus o... 59 3e-07
XP_007010834.2 PREDICTED: retinoblastoma-related protein [Theobr... 59 3e-07
>XP_012447255.1 PREDICTED: retinoblastoma-related protein isoform X3 [Gossypium
raimondii]
Length = 996
Score = 61.6 bits (148), Expect = 4e-08
Identities = 30/39 (76%), Positives = 34/39 (87%), Gaps = 1/39 (2%)
Frame = +2
Query: 71 LHQIFD*GQNGDIRSPKRVCTD-RSVLVERNSFTSPLKD 184
+H F GQNGD+RSPKR+CTD RSVLVERNSFTSP+KD
Sbjct: 640 MHINFSEGQNGDVRSPKRLCTDYRSVLVERNSFTSPVKD 678
>GAV86714.1 RB_B domain-containing protein/RB_A domain-containing
protein/DUF3452 domain-containing protein [Cephalotus
follicularis]
Length = 1015
Score = 60.8 bits (146), Expect = 8e-08
Identities = 31/44 (70%), Positives = 36/44 (81%), Gaps = 1/44 (2%)
Frame = +2
Query: 92 GQNGDIRSPKRVCTD-RSVLVERNSFTSPLKDH*CCIYVLNNKV 220
GQNGD++SPKRVCTD RSVLVERNSFTSP+KD I L +K+
Sbjct: 664 GQNGDLKSPKRVCTDLRSVLVERNSFTSPIKDRMMTINNLKSKL 707
>OAY54738.1 hypothetical protein MANES_03G097800 [Manihot esculenta] OAY54739.1
hypothetical protein MANES_03G097800 [Manihot esculenta]
OAY54740.1 hypothetical protein MANES_03G097800 [Manihot
esculenta]
Length = 886
Score = 60.5 bits (145), Expect = 1e-07
Identities = 32/44 (72%), Positives = 35/44 (79%), Gaps = 1/44 (2%)
Frame = +2
Query: 92 GQNGDIRSPKRVCTD-RSVLVERNSFTSPLKDH*CCIYVLNNKV 220
GQNGDIRSPKR CTD RSVLVERNSFTSP+KD I L +K+
Sbjct: 534 GQNGDIRSPKRPCTDIRSVLVERNSFTSPVKDRLLAITNLKSKL 577
>Q4JF75.1 RecName: Full=Retinoblastoma-related protein BAE06273.1
retinoblastoma [Scutellaria baicalensis]
Length = 1006
Score = 60.5 bits (145), Expect = 1e-07
Identities = 32/42 (76%), Positives = 35/42 (83%), Gaps = 1/42 (2%)
Frame = +2
Query: 92 GQNGDIRSPKRVCTD-RSVLVERNSFTSPLKDH*CCIYVLNN 214
GQNGDIRSPKRVCT+ RSVLVERNSFTSP+KD + LNN
Sbjct: 655 GQNGDIRSPKRVCTEYRSVLVERNSFTSPVKDR---LLALNN 693
>XP_016686249.1 PREDICTED: retinoblastoma-related protein-like isoform X3
[Gossypium hirsutum]
Length = 983
Score = 59.7 bits (143), Expect = 2e-07
Identities = 30/39 (76%), Positives = 32/39 (82%), Gaps = 1/39 (2%)
Frame = +2
Query: 71 LHQIFD*GQNGDIRSPKRVCTD-RSVLVERNSFTSPLKD 184
+H F GQNGD+RSPKR CTD RSVLVERNSFTSP KD
Sbjct: 627 MHINFSGGQNGDVRSPKRQCTDYRSVLVERNSFTSPAKD 665
>XP_010648448.1 PREDICTED: retinoblastoma-related protein isoform X4 [Vitis
vinifera] CBI20795.3 unnamed protein product, partial
[Vitis vinifera]
Length = 1006
Score = 59.7 bits (143), Expect = 2e-07
Identities = 31/44 (70%), Positives = 35/44 (79%), Gaps = 1/44 (2%)
Frame = +2
Query: 92 GQNGDIRSPKRVCTD-RSVLVERNSFTSPLKDH*CCIYVLNNKV 220
GQNGDIRSPKRVC D RSVLVERNSFTSP+KD + L +K+
Sbjct: 655 GQNGDIRSPKRVCPDYRSVLVERNSFTSPVKDRFLALNNLKSKL 698
>A7P514.1 RecName: Full=Retinoblastoma-related protein AEV45768.1 RBR protein
[Vitis pseudoreticulata]
Length = 1007
Score = 59.7 bits (143), Expect = 2e-07
Identities = 31/44 (70%), Positives = 35/44 (79%), Gaps = 1/44 (2%)
Frame = +2
Query: 92 GQNGDIRSPKRVCTD-RSVLVERNSFTSPLKDH*CCIYVLNNKV 220
GQNGDIRSPKRVC D RSVLVERNSFTSP+KD + L +K+
Sbjct: 656 GQNGDIRSPKRVCPDYRSVLVERNSFTSPVKDRFLALNNLKSKL 699
>XP_010648447.1 PREDICTED: retinoblastoma-related protein isoform X3 [Vitis
vinifera]
Length = 1009
Score = 59.7 bits (143), Expect = 2e-07
Identities = 31/44 (70%), Positives = 35/44 (79%), Gaps = 1/44 (2%)
Frame = +2
Query: 92 GQNGDIRSPKRVCTD-RSVLVERNSFTSPLKDH*CCIYVLNNKV 220
GQNGDIRSPKRVC D RSVLVERNSFTSP+KD + L +K+
Sbjct: 658 GQNGDIRSPKRVCPDYRSVLVERNSFTSPVKDRFLALNNLKSKL 701
>XP_019075076.1 PREDICTED: retinoblastoma-related protein isoform X2 [Vitis
vinifera]
Length = 1010
Score = 59.7 bits (143), Expect = 2e-07
Identities = 31/44 (70%), Positives = 35/44 (79%), Gaps = 1/44 (2%)
Frame = +2
Query: 92 GQNGDIRSPKRVCTD-RSVLVERNSFTSPLKDH*CCIYVLNNKV 220
GQNGDIRSPKRVC D RSVLVERNSFTSP+KD + L +K+
Sbjct: 659 GQNGDIRSPKRVCPDYRSVLVERNSFTSPVKDRFLALNNLKSKL 702
>XP_019075075.1 PREDICTED: retinoblastoma-related protein isoform X1 [Vitis
vinifera]
Length = 1013
Score = 59.7 bits (143), Expect = 2e-07
Identities = 31/44 (70%), Positives = 35/44 (79%), Gaps = 1/44 (2%)
Frame = +2
Query: 92 GQNGDIRSPKRVCTD-RSVLVERNSFTSPLKDH*CCIYVLNNKV 220
GQNGDIRSPKRVC D RSVLVERNSFTSP+KD + L +K+
Sbjct: 662 GQNGDIRSPKRVCPDYRSVLVERNSFTSPVKDRFLALNNLKSKL 705
>XP_008446983.1 PREDICTED: retinoblastoma-related protein [Cucumis melo]
Length = 1024
Score = 59.7 bits (143), Expect = 2e-07
Identities = 29/32 (90%), Positives = 31/32 (96%), Gaps = 1/32 (3%)
Frame = +2
Query: 92 GQNGDIRSPKRVCTD-RSVLVERNSFTSPLKD 184
GQNGDIRSPKR+CTD RSVLVERNSFTSP+KD
Sbjct: 673 GQNGDIRSPKRLCTDLRSVLVERNSFTSPVKD 704
>XP_004142479.1 PREDICTED: retinoblastoma-related protein isoform X2 [Cucumis
sativus] KGN52338.1 hypothetical protein Csa_5G625980
[Cucumis sativus]
Length = 1024
Score = 59.7 bits (143), Expect = 2e-07
Identities = 29/32 (90%), Positives = 31/32 (96%), Gaps = 1/32 (3%)
Frame = +2
Query: 92 GQNGDIRSPKRVCTD-RSVLVERNSFTSPLKD 184
GQNGDIRSPKR+CTD RSVLVERNSFTSP+KD
Sbjct: 673 GQNGDIRSPKRLCTDLRSVLVERNSFTSPVKD 704
>XP_011655942.1 PREDICTED: retinoblastoma-related protein isoform X1 [Cucumis
sativus]
Length = 1025
Score = 59.7 bits (143), Expect = 2e-07
Identities = 29/32 (90%), Positives = 31/32 (96%), Gaps = 1/32 (3%)
Frame = +2
Query: 92 GQNGDIRSPKRVCTD-RSVLVERNSFTSPLKD 184
GQNGDIRSPKR+CTD RSVLVERNSFTSP+KD
Sbjct: 674 GQNGDIRSPKRLCTDLRSVLVERNSFTSPVKD 705
>XP_012447258.1 PREDICTED: retinoblastoma-related protein isoform X6 [Gossypium
raimondii]
Length = 874
Score = 59.3 bits (142), Expect = 3e-07
Identities = 28/32 (87%), Positives = 31/32 (96%), Gaps = 1/32 (3%)
Frame = +2
Query: 92 GQNGDIRSPKRVCTD-RSVLVERNSFTSPLKD 184
GQNGD+RSPKR+CTD RSVLVERNSFTSP+KD
Sbjct: 525 GQNGDVRSPKRLCTDYRSVLVERNSFTSPVKD 556
>KJB60298.1 hypothetical protein B456_009G299000 [Gossypium raimondii]
Length = 899
Score = 59.3 bits (142), Expect = 3e-07
Identities = 28/32 (87%), Positives = 31/32 (96%), Gaps = 1/32 (3%)
Frame = +2
Query: 92 GQNGDIRSPKRVCTD-RSVLVERNSFTSPLKD 184
GQNGD+RSPKR+CTD RSVLVERNSFTSP+KD
Sbjct: 670 GQNGDVRSPKRLCTDYRSVLVERNSFTSPVKD 701
>XP_012447257.1 PREDICTED: retinoblastoma-related protein isoform X5 [Gossypium
raimondii]
Length = 971
Score = 59.3 bits (142), Expect = 3e-07
Identities = 28/32 (87%), Positives = 31/32 (96%), Gaps = 1/32 (3%)
Frame = +2
Query: 92 GQNGDIRSPKRVCTD-RSVLVERNSFTSPLKD 184
GQNGD+RSPKR+CTD RSVLVERNSFTSP+KD
Sbjct: 622 GQNGDVRSPKRLCTDYRSVLVERNSFTSPVKD 653
>XP_012447256.1 PREDICTED: retinoblastoma-related protein isoform X4 [Gossypium
raimondii] KJB60299.1 hypothetical protein
B456_009G299000 [Gossypium raimondii]
Length = 978
Score = 59.3 bits (142), Expect = 3e-07
Identities = 28/32 (87%), Positives = 31/32 (96%), Gaps = 1/32 (3%)
Frame = +2
Query: 92 GQNGDIRSPKRVCTD-RSVLVERNSFTSPLKD 184
GQNGD+RSPKR+CTD RSVLVERNSFTSP+KD
Sbjct: 629 GQNGDVRSPKRLCTDYRSVLVERNSFTSPVKD 660
>OMO51320.1 Retinoblastoma-associated protein, B-box [Corchorus capsularis]
Length = 1010
Score = 59.3 bits (142), Expect = 3e-07
Identities = 28/32 (87%), Positives = 31/32 (96%), Gaps = 1/32 (3%)
Frame = +2
Query: 92 GQNGDIRSPKRVCTD-RSVLVERNSFTSPLKD 184
GQNGD+RSPKR+CTD RSVLVERNSFTSP+KD
Sbjct: 669 GQNGDVRSPKRLCTDYRSVLVERNSFTSPVKD 700
>OMO87219.1 Retinoblastoma-associated protein, B-box [Corchorus olitorius]
Length = 1011
Score = 59.3 bits (142), Expect = 3e-07
Identities = 28/32 (87%), Positives = 31/32 (96%), Gaps = 1/32 (3%)
Frame = +2
Query: 92 GQNGDIRSPKRVCTD-RSVLVERNSFTSPLKD 184
GQNGD+RSPKR+CTD RSVLVERNSFTSP+KD
Sbjct: 669 GQNGDVRSPKRLCTDYRSVLVERNSFTSPVKD 700
>XP_007010834.2 PREDICTED: retinoblastoma-related protein [Theobroma cacao]
XP_017984708.1 PREDICTED: retinoblastoma-related protein
[Theobroma cacao] XP_017984709.1 PREDICTED:
retinoblastoma-related protein [Theobroma cacao]
Length = 1011
Score = 59.3 bits (142), Expect = 3e-07
Identities = 28/32 (87%), Positives = 31/32 (96%), Gaps = 1/32 (3%)
Frame = +2
Query: 92 GQNGDIRSPKRVCTD-RSVLVERNSFTSPLKD 184
GQNGD+RSPKR+CTD RSVLVERNSFTSP+KD
Sbjct: 662 GQNGDVRSPKRLCTDYRSVLVERNSFTSPVKD 693