BLASTX nr result

ID: Panax25_contig00029844 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00029844
         (577 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AGH32872.1 auxin response factor 28 [Camellia sinensis]                67   2e-09
XP_017229595.1 PREDICTED: auxin response factor 15 [Daucus carot...    66   2e-09
KZN11383.1 hypothetical protein DCAR_004039 [Daucus carota subsp...    66   2e-09
KZN07151.1 hypothetical protein DCAR_007988 [Daucus carota subsp...    57   2e-06
XP_017231661.1 PREDICTED: auxin response factor 3-like isoform X...    57   3e-06
XP_017231660.1 PREDICTED: auxin response factor 3-like isoform X...    57   3e-06
XP_010655464.1 PREDICTED: auxin response factor 3 [Vitis vinifer...    56   8e-06

>AGH32872.1 auxin response factor 28 [Camellia sinensis]
          Length = 703

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 42/82 (51%), Positives = 49/82 (59%), Gaps = 6/82 (7%)
 Frame = -2

Query: 576 RGTPDLVWTRKSSCKLFGFPLTEGSPGIYKEGNPTVVTSLLPHVEEQLNSKPQIATNL-- 403
           RG+ DLV T KSSCKLFGFPLTE      K+ NPT   S LP  EE LN KP + T +  
Sbjct: 625 RGSQDLVSTCKSSCKLFGFPLTEERNVKNKDCNPT--QSFLPRDEEHLNPKPTLVTKIVG 682

Query: 402 ----GARDIYTARDHMLLDIAM 349
                  ++Y  RD MLLDIA+
Sbjct: 683 NSCTNVTELYAVRD-MLLDIAL 703


>XP_017229595.1 PREDICTED: auxin response factor 15 [Daucus carota subsp. sativus]
           XP_017229596.1 PREDICTED: auxin response factor 15
           [Daucus carota subsp. sativus]
          Length = 708

 Score = 66.2 bits (160), Expect = 2e-09
 Identities = 42/88 (47%), Positives = 52/88 (59%), Gaps = 13/88 (14%)
 Frame = -2

Query: 573 GTPDLVWTRKSSCKLFGFPLTEGSPGIYKEGNPTVVTSLL-------PHVEEQLNSKPQI 415
           G+ +LV + KSSC+LFGF LTE SP I KE NP+ + S         P  +EQ NSKP  
Sbjct: 622 GSSNLVSSCKSSCRLFGFLLTEESPAISKESNPSRIQSAYVHKAPHHPRGDEQFNSKPSS 681

Query: 414 ATNL------GARDIYTARDHMLLDIAM 349
            T +       A+D+Y  RD MLLDIAM
Sbjct: 682 MTKIVGGSCTKAKDLYNVRD-MLLDIAM 708


>KZN11383.1 hypothetical protein DCAR_004039 [Daucus carota subsp. sativus]
          Length = 716

 Score = 66.2 bits (160), Expect = 2e-09
 Identities = 42/88 (47%), Positives = 52/88 (59%), Gaps = 13/88 (14%)
 Frame = -2

Query: 573 GTPDLVWTRKSSCKLFGFPLTEGSPGIYKEGNPTVVTSLL-------PHVEEQLNSKPQI 415
           G+ +LV + KSSC+LFGF LTE SP I KE NP+ + S         P  +EQ NSKP  
Sbjct: 630 GSSNLVSSCKSSCRLFGFLLTEESPAISKESNPSRIQSAYVHKAPHHPRGDEQFNSKPSS 689

Query: 414 ATNL------GARDIYTARDHMLLDIAM 349
            T +       A+D+Y  RD MLLDIAM
Sbjct: 690 MTKIVGGSCTKAKDLYNVRD-MLLDIAM 716


>KZN07151.1 hypothetical protein DCAR_007988 [Daucus carota subsp. sativus]
          Length = 704

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 41/89 (46%), Positives = 53/89 (59%), Gaps = 13/89 (14%)
 Frame = -2

Query: 576 RGTPDLVWTRKSSCKLFGFPLTEGSPGIYKEGNPTVV-------TSLLPHVEEQLNSKPQ 418
           +G+ +L+ T ++SC+LFGFPLTE S  ++KE NP  V       +S LP  +EQ  S   
Sbjct: 618 KGSSNLLSTCENSCRLFGFPLTESS-HVHKECNPNWVQSPYIQQSSHLPQRDEQFYSHSL 676

Query: 417 IATNL------GARDIYTARDHMLLDIAM 349
             T +       A DIYTARD MLLDIAM
Sbjct: 677 STTKMVGGSCTKASDIYTARD-MLLDIAM 704


>XP_017231661.1 PREDICTED: auxin response factor 3-like isoform X2 [Daucus carota
           subsp. sativus]
          Length = 732

 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 41/89 (46%), Positives = 53/89 (59%), Gaps = 13/89 (14%)
 Frame = -2

Query: 576 RGTPDLVWTRKSSCKLFGFPLTEGSPGIYKEGNPTVV-------TSLLPHVEEQLNSKPQ 418
           +G+ +L+ T ++SC+LFGFPLTE S  ++KE NP  V       +S LP  +EQ  S   
Sbjct: 646 KGSSNLLSTCENSCRLFGFPLTESS-HVHKECNPNWVQSPYIQQSSHLPQRDEQFYSHSL 704

Query: 417 IATNL------GARDIYTARDHMLLDIAM 349
             T +       A DIYTARD MLLDIAM
Sbjct: 705 STTKMVGGSCTKASDIYTARD-MLLDIAM 732


>XP_017231660.1 PREDICTED: auxin response factor 3-like isoform X1 [Daucus carota
           subsp. sativus]
          Length = 734

 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 41/89 (46%), Positives = 53/89 (59%), Gaps = 13/89 (14%)
 Frame = -2

Query: 576 RGTPDLVWTRKSSCKLFGFPLTEGSPGIYKEGNPTVV-------TSLLPHVEEQLNSKPQ 418
           +G+ +L+ T ++SC+LFGFPLTE S  ++KE NP  V       +S LP  +EQ  S   
Sbjct: 648 KGSSNLLSTCENSCRLFGFPLTESS-HVHKECNPNWVQSPYIQQSSHLPQRDEQFYSHSL 706

Query: 417 IATNL------GARDIYTARDHMLLDIAM 349
             T +       A DIYTARD MLLDIAM
Sbjct: 707 STTKMVGGSCTKASDIYTARD-MLLDIAM 734


>XP_010655464.1 PREDICTED: auxin response factor 3 [Vitis vinifera] XP_019078171.1
           PREDICTED: auxin response factor 3 [Vitis vinifera]
          Length = 739

 Score = 55.8 bits (133), Expect = 8e-06
 Identities = 41/86 (47%), Positives = 52/86 (60%), Gaps = 10/86 (11%)
 Frame = -2

Query: 576 RGTPDLVWTRKSSCKLFGFPLTEGSPGIYKEGNPTVVT-SLLP---HVEEQLNSKPQIAT 409
           RG+ DLV T KSSC+LFGF LTE      K  NPT VT SL+P    + +QL+S+P + T
Sbjct: 655 RGSQDLVPTCKSSCRLFGFSLTEERSIGNKVDNPTPVTSSLIPGTSFLPQQLHSEPPVMT 714

Query: 408 N-LGAR-----DIYTARDHMLLDIAM 349
             +G+      D Y  RD ML DIA+
Sbjct: 715 KAIGSNCTKVSDFYAVRD-MLFDIAL 739


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