BLASTX nr result
ID: Panax25_contig00029825
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax25_contig00029825
(1346 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ACZ65154.1 Rps3, partial (chloroplast) [Eryngium maritimum] 90 1e-18
CCF70847.1 small ribosomal protein subunit 3, partial (chloropla... 87 8e-18
CCF70823.1 small ribosomal protein subunit 3, partial (chloropla... 86 1e-17
CCF70837.1 small ribosomal protein subunit 3, partial (chloropla... 86 1e-17
CCF70817.1 small ribosomal protein subunit 3, partial (chloropla... 86 1e-17
ANS71807.1 ribosomal protein S3 (chloroplast) [Eleutherococcus s... 92 1e-17
YP_009266557.1 ribosomal protein S3 (chloroplast) [Panax stipule... 92 1e-17
YP_087004.1 ribosomal protein S3 [Panax ginseng] YP_009121212.1 ... 92 1e-17
YP_008815156.1 ribosomal protein S3 (chloroplast) [Schefflera de... 92 1e-17
YP_008814895.1 ribosomal protein S3 (chloroplast) [Aralia undula... 92 1e-17
YP_004935591.1 ribosomal protein S3 (chloroplast) [Eleutherococc... 92 1e-17
ADK89732.1 ribosomal protein S3 (chloroplast) [Hydrocotyle verti... 91 2e-17
CCF70855.1 small ribosomal protein subunit 3, partial (chloropla... 85 3e-17
CCF70825.1 small ribosomal protein subunit 3, partial (chloropla... 85 4e-17
ADX99146.1 ribosomal protein S3, partial (chloroplast) [Citharex... 89 4e-17
KMT04633.1 hypothetical protein BVRB_8g182860 [Beta vulgaris sub... 86 4e-17
CCF70861.1 small ribosomal protein subunit 3, partial (chloropla... 84 5e-17
APU51517.1 ribosomal protein S3 (chloroplast) [Sambucus williamsii] 90 5e-17
YP_009338463.1 ribosomal protein S3 (chloroplast) [Pterygopleuru... 90 5e-17
YP_009338379.1 ribosomal protein S3 (chloroplast) [Peucedanum in... 90 5e-17
>ACZ65154.1 Rps3, partial (chloroplast) [Eryngium maritimum]
Length = 67
Score = 89.7 bits (221), Expect = 1e-18
Identities = 41/41 (100%), Positives = 41/41 (100%)
Frame = +1
Query: 1 WIREGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFIDGE 123
WIREGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFIDGE
Sbjct: 27 WIREGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFIDGE 67
>CCF70847.1 small ribosomal protein subunit 3, partial (chloroplast)
[Aextoxicon punctatum]
Length = 43
Score = 86.7 bits (213), Expect = 8e-18
Identities = 40/41 (97%), Positives = 40/41 (97%)
Frame = +1
Query: 1 WIREGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFIDGE 123
WIREGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFID E
Sbjct: 3 WIREGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFIDEE 43
>CCF70823.1 small ribosomal protein subunit 3, partial (chloroplast)
[Trochodendron aralioides]
Length = 41
Score = 86.3 bits (212), Expect = 1e-17
Identities = 39/41 (95%), Positives = 40/41 (97%)
Frame = +1
Query: 1 WIREGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFIDGE 123
WIREGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIF+D E
Sbjct: 1 WIREGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFVDEE 41
>CCF70837.1 small ribosomal protein subunit 3, partial (chloroplast)
[Cercidiphyllum japonicum]
Length = 42
Score = 86.3 bits (212), Expect = 1e-17
Identities = 39/41 (95%), Positives = 40/41 (97%)
Frame = +1
Query: 1 WIREGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFIDGE 123
WIREGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIF+D E
Sbjct: 2 WIREGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFVDEE 42
>CCF70817.1 small ribosomal protein subunit 3, partial (chloroplast) [Platanus
orientalis] CCF70819.1 small ribosomal protein subunit
3, partial (chloroplast) [Platanus occidentalis]
CCF70821.1 small ribosomal protein subunit 3, partial
(chloroplast) [Tetracentron sinense] CCF70829.1 small
ribosomal protein subunit 3, partial (chloroplast)
[Pachysandra terminalis] CCF70831.1 small ribosomal
protein subunit 3, partial (chloroplast) [Gunnera
tinctoria] CCF70833.1 small ribosomal protein subunit 3,
partial (chloroplast) [Myrothamnus flabellifolia]
Length = 43
Score = 86.3 bits (212), Expect = 1e-17
Identities = 39/41 (95%), Positives = 40/41 (97%)
Frame = +1
Query: 1 WIREGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFIDGE 123
WIREGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIF+D E
Sbjct: 3 WIREGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFVDEE 43
>ANS71807.1 ribosomal protein S3 (chloroplast) [Eleutherococcus sessiliflorus]
Length = 219
Score = 91.7 bits (226), Expect = 1e-17
Identities = 42/42 (100%), Positives = 42/42 (100%)
Frame = +1
Query: 1 WIREGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFIDGEE 126
WIREGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFIDGEE
Sbjct: 178 WIREGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFIDGEE 219
>YP_009266557.1 ribosomal protein S3 (chloroplast) [Panax stipuleanatus] ANK78369.1
ribosomal protein S3 (chloroplast) [Panax japonicus var.
bipinnatifidus] ANK78455.1 ribosomal protein S3
(chloroplast) [Panax stipuleanatus]
Length = 219
Score = 91.7 bits (226), Expect = 1e-17
Identities = 42/42 (100%), Positives = 42/42 (100%)
Frame = +1
Query: 1 WIREGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFIDGEE 126
WIREGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFIDGEE
Sbjct: 178 WIREGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFIDGEE 219
>YP_087004.1 ribosomal protein S3 [Panax ginseng] YP_009121212.1 ribosomal
protein S3 (chloroplast) [Panax notoginseng]
YP_009155466.1 ribosomal protein S3 (chloroplast) [Panax
quinquefolius] YP_009191891.1 ribosomal protein S3
(chloroplast) [Panax japonicus] YP_009191978.1 ribosomal
protein S3 (chloroplast) [Panax vietnamensis] Q68RW8.1
RecName: Full=30S ribosomal protein S3, chloroplastic
AAT98547.1 ribosomal protein S3 (chloroplast) [Panax
ginseng] AGM15026.1 ribosomal protein S3 (chloroplast)
[Panax ginseng] AGM15112.1 ribosomal protein S3
(chloroplast) [Panax ginseng] AGM15198.1 ribosomal
protein S3 (chloroplast) [Panax ginseng] AGW31958.1
ribosomal protein S3 (chloroplast) [Panax ginseng]
AHJ81028.1 ribosomal protein S3 (mitochondrion) [Panax
ginseng] AIA24366.1 ribosomal protein S3 (chloroplast)
[Panax notoginseng] AIX97927.1 ribosomal protein S3
(chloroplast) [Panax ginseng] AIX98014.1 ribosomal
protein S3 (chloroplast) [Panax ginseng] AIX98097.1
ribosomal protein S3 (chloroplast) [Panax ginseng]
AIX98182.1 ribosomal protein S3 (chloroplast) [Panax
ginseng] AIX98267.1 ribosomal protein S3 (chloroplast)
[Panax ginseng] AIX98352.1 ribosomal protein S3
(chloroplast) [Panax ginseng] AIX98437.1 ribosomal
protein S3 (chloroplast) [Panax ginseng] AIX98522.1
ribosomal protein S3 (chloroplast) [Panax ginseng]
AIX98607.1 ribosomal protein S3 (chloroplast) [Panax
ginseng] AJC99526.1 ribosomal protein S3 (chloroplast)
[Panax quinquefolius] AJC99611.1 ribosomal protein S3
(chloroplast) [Panax ginseng] AJC99696.1 ribosomal
protein S3 (chloroplast) [Panax ginseng] AKB99110.1
ribosomal protein S3 (chloroplast) [Panax notoginseng]
AKB99197.1 ribosomal protein S3 (chloroplast) [Panax
japonicus] AKB99284.1 ribosomal protein S3 (chloroplast)
[Panax vietnamensis] AKB99371.1 ribosomal protein S3
(chloroplast) [Panax vietnamensis] AKG26639.1 ribosomal
protein S3 (chloroplast) [Panax notoginseng] AKU70815.1
ribosomal protein S3 (chloroplast) [Panax notoginseng]
AKZ29786.1 ribosomal protein S3 (chloroplast) [Panax
quinquefolius] AMR97487.1 ribosomal protein S3
(chloroplast) [Panax vietnamensis]
Length = 219
Score = 91.7 bits (226), Expect = 1e-17
Identities = 42/42 (100%), Positives = 42/42 (100%)
Frame = +1
Query: 1 WIREGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFIDGEE 126
WIREGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFIDGEE
Sbjct: 178 WIREGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFIDGEE 219
>YP_008815156.1 ribosomal protein S3 (chloroplast) [Schefflera delavayi] AGG39255.1
ribosomal protein S3 (chloroplast) [Schefflera delavayi]
Length = 219
Score = 91.7 bits (226), Expect = 1e-17
Identities = 42/42 (100%), Positives = 42/42 (100%)
Frame = +1
Query: 1 WIREGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFIDGEE 126
WIREGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFIDGEE
Sbjct: 178 WIREGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFIDGEE 219
>YP_008814895.1 ribosomal protein S3 (chloroplast) [Aralia undulata] AGG38994.1
ribosomal protein S3 (chloroplast) [Aralia undulata]
Length = 219
Score = 91.7 bits (226), Expect = 1e-17
Identities = 42/42 (100%), Positives = 42/42 (100%)
Frame = +1
Query: 1 WIREGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFIDGEE 126
WIREGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFIDGEE
Sbjct: 178 WIREGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFIDGEE 219
>YP_004935591.1 ribosomal protein S3 (chloroplast) [Eleutherococcus senticosus]
YP_008814982.1 ribosomal protein S3 (chloroplast)
[Brassaiopsis hainla] YP_008815069.1 ribosomal protein
S3 (chloroplast) [Metapanax delavayi] YP_008815243.1
ribosomal protein S3 (chloroplast) [Kalopanax
septemlobus] YP_009122764.1 ribosomal protein S3
(chloroplast) [Dendropanax dentiger] YP_009159576.1
ribosomal protein S3 (chloroplast) [Dendropanax
morbifer] YP_009161718.1 ribosomal protein S3
(chloroplast) [Fatsia japonica] YP_009241090.1 ribosomal
protein S3 (chloroplast) [Schefflera heptaphylla]
AEO92658.1 ribosomal protein S3 (chloroplast)
[Eleutherococcus senticosus] AGG39081.1 ribosomal
protein S3 (chloroplast) [Brassaiopsis hainla]
AGG39168.1 ribosomal protein S3 (chloroplast) [Metapanax
delavayi] AGG39342.1 ribosomal protein S3 (chloroplast)
[Kalopanax septemlobus] AJK29881.1 ribosomal protein S3
(chloroplast) [Dendropanax dentiger] AKQ20766.1
ribosomal protein S3 (chloroplast) [Dendropanax
morbifer] AKS10992.1 ribosomal protein S3 (chloroplast)
[Fatsia japonica] AMK46150.1 ribosomal protein S3
(chloroplast) [Schefflera heptaphylla] ANS71894.1
ribosomal protein S3 (chloroplast) [Eleutherococcus
gracilistylus]
Length = 219
Score = 91.7 bits (226), Expect = 1e-17
Identities = 42/42 (100%), Positives = 42/42 (100%)
Frame = +1
Query: 1 WIREGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFIDGEE 126
WIREGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFIDGEE
Sbjct: 178 WIREGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFIDGEE 219
>ADK89732.1 ribosomal protein S3 (chloroplast) [Hydrocotyle verticillata]
Length = 219
Score = 90.9 bits (224), Expect = 2e-17
Identities = 41/42 (97%), Positives = 42/42 (100%)
Frame = +1
Query: 1 WIREGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFIDGEE 126
WIREGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIF+DGEE
Sbjct: 178 WIREGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFLDGEE 219
>CCF70855.1 small ribosomal protein subunit 3, partial (chloroplast)
[Stachyurus chinensis]
Length = 43
Score = 85.1 bits (209), Expect = 3e-17
Identities = 39/42 (92%), Positives = 41/42 (97%)
Frame = +1
Query: 1 WIREGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFIDGEE 126
WIREGRVPLQTIRAKIDYCS+TVRTIYGVLGIKIWIFID E+
Sbjct: 2 WIREGRVPLQTIRAKIDYCSHTVRTIYGVLGIKIWIFIDEEK 43
>CCF70825.1 small ribosomal protein subunit 3, partial (chloroplast) [Didymeles
integrifolia]
Length = 43
Score = 84.7 bits (208), Expect = 4e-17
Identities = 38/41 (92%), Positives = 40/41 (97%)
Frame = +1
Query: 1 WIREGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFIDGE 123
WIREGRVPLQTIRAKIDYCSYTV+TIYGVLGIKIWIF+D E
Sbjct: 3 WIREGRVPLQTIRAKIDYCSYTVQTIYGVLGIKIWIFVDEE 43
>ADX99146.1 ribosomal protein S3, partial (chloroplast) [Citharexylum
ligustrinum]
Length = 195
Score = 89.4 bits (220), Expect = 4e-17
Identities = 41/42 (97%), Positives = 41/42 (97%)
Frame = +1
Query: 1 WIREGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFIDGEE 126
WIREGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFID EE
Sbjct: 153 WIREGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFIDNEE 194
>KMT04633.1 hypothetical protein BVRB_8g182860 [Beta vulgaris subsp. vulgaris]
Length = 74
Score = 85.5 bits (210), Expect = 4e-17
Identities = 39/41 (95%), Positives = 40/41 (97%)
Frame = +1
Query: 1 WIREGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFIDGE 123
WIREGRVPLQTIRAKIDYC+YTVRTIYGVLGIKIWIFID E
Sbjct: 34 WIREGRVPLQTIRAKIDYCAYTVRTIYGVLGIKIWIFIDEE 74
>CCF70861.1 small ribosomal protein subunit 3, partial (chloroplast) [Impatiens
noli-tangere]
Length = 43
Score = 84.3 bits (207), Expect = 5e-17
Identities = 38/41 (92%), Positives = 39/41 (95%)
Frame = +1
Query: 1 WIREGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFIDGE 123
WIREGRVPLQTIRAKIDYC YTVRTIYGVLGIKIWIFID +
Sbjct: 3 WIREGRVPLQTIRAKIDYCCYTVRTIYGVLGIKIWIFIDND 43
>APU51517.1 ribosomal protein S3 (chloroplast) [Sambucus williamsii]
Length = 218
Score = 89.7 bits (221), Expect = 5e-17
Identities = 41/41 (100%), Positives = 41/41 (100%)
Frame = +1
Query: 1 WIREGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFIDGE 123
WIREGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFIDGE
Sbjct: 178 WIREGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFIDGE 218
>YP_009338463.1 ribosomal protein S3 (chloroplast) [Pterygopleurum neurophyllum]
ANK36558.1 ribosomal protein S3 (chloroplast)
[Pterygopleurum neurophyllum]
Length = 218
Score = 89.7 bits (221), Expect = 5e-17
Identities = 41/41 (100%), Positives = 41/41 (100%)
Frame = +1
Query: 1 WIREGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFIDGE 123
WIREGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFIDGE
Sbjct: 178 WIREGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFIDGE 218
>YP_009338379.1 ribosomal protein S3 (chloroplast) [Peucedanum insolens] ANK36474.1
ribosomal protein S3 (chloroplast) [Peucedanum insolens]
Length = 218
Score = 89.7 bits (221), Expect = 5e-17
Identities = 41/41 (100%), Positives = 41/41 (100%)
Frame = +1
Query: 1 WIREGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFIDGE 123
WIREGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFIDGE
Sbjct: 178 WIREGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFIDGE 218