BLASTX nr result
ID: Panax25_contig00029759
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax25_contig00029759
(715 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_017236138.1 PREDICTED: polyadenylation and cleavage factor ho... 303 1e-93
XP_017236137.1 PREDICTED: polyadenylation and cleavage factor ho... 303 4e-93
XP_010275999.1 PREDICTED: polyadenylation and cleavage factor ho... 271 7e-82
XP_019054573.1 PREDICTED: polyadenylation and cleavage factor ho... 270 2e-81
XP_010275998.1 PREDICTED: polyadenylation and cleavage factor ho... 271 6e-81
OAY24701.1 hypothetical protein MANES_17G036600 [Manihot esculenta] 270 1e-80
XP_010267732.1 PREDICTED: polyadenylation and cleavage factor ho... 270 1e-80
XP_010267731.1 PREDICTED: polyadenylation and cleavage factor ho... 270 1e-80
XP_008224793.1 PREDICTED: LOW QUALITY PROTEIN: polyadenylation a... 267 7e-80
XP_016550983.1 PREDICTED: polyadenylation and cleavage factor ho... 264 7e-79
XP_016550981.1 PREDICTED: polyadenylation and cleavage factor ho... 264 8e-79
ONI10047.1 hypothetical protein PRUPE_4G024700 [Prunus persica] 265 9e-79
XP_007213705.1 hypothetical protein PRUPE_ppa000684mg [Prunus pe... 265 1e-78
XP_006467998.1 PREDICTED: polyadenylation and cleavage factor ho... 262 3e-78
XP_010655357.1 PREDICTED: polyadenylation and cleavage factor ho... 263 3e-78
XP_006467996.1 PREDICTED: polyadenylation and cleavage factor ho... 262 4e-78
XP_015382498.1 PREDICTED: polyadenylation and cleavage factor ho... 262 6e-78
XP_006449074.1 hypothetical protein CICLE_v10014158mg [Citrus cl... 261 7e-78
EOY28631.1 PCF11P-similar protein 4, putative isoform 2 [Theobro... 256 2e-77
XP_019257117.1 PREDICTED: polyadenylation and cleavage factor ho... 260 3e-77
>XP_017236138.1 PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X2
[Daucus carota subsp. sativus]
Length = 922
Score = 303 bits (775), Expect = 1e-93
Identities = 150/234 (64%), Positives = 171/234 (73%)
Frame = +3
Query: 6 VLQPPLVMHQEVQPNLVPPAAISTPSHLRLSHLNHGYIPQSHGPFVSTVFLNPTPSMQSS 185
VL+PP M VQ N++PP +STPS + GY P PFV+T F+NP P MQSS
Sbjct: 594 VLRPPYQMRPNVQQNMIPPVGMSTPSQVAYQPFGRGYAPPGQRPFVNTGFMNPAPGMQSS 653
Query: 186 PPILKIQNTSMHXXXXXXXXXXXXXXXXSSQMIPTSENPSFIASHPPAGGAFSGLFSSLM 365
PIL ++N+ H SSQMIPT +NPS +A +P GGA SGLF+SLM
Sbjct: 654 MPILNVRNSPAHLPGVGLPPLPPEPRPVSSQMIPT-QNPSLVALNPSGGGALSGLFNSLM 712
Query: 366 AQGLISLTNQAPIQDHVGLEFNSDLLKVRYESAITALYTCLPRQCTTCGLRFKCQEEHSS 545
AQGLISLTNQA +QD VGLEFN+DLLKVR+ESAI+ALY LPRQCTTCGLRFKCQEEHSS
Sbjct: 713 AQGLISLTNQASVQDPVGLEFNTDLLKVRHESAISALYADLPRQCTTCGLRFKCQEEHSS 772
Query: 546 HMDWHVTKNRISKIHKQKPSRKWFVSVNMWLSGAEALGVDAVPGFLPTENVTEK 707
HMDWHVT+NR SK KQKPSR+WFVS +MWLSG EALG DA PGFLPTE V EK
Sbjct: 773 HMDWHVTRNRTSKNRKQKPSRRWFVSADMWLSGTEALGADAAPGFLPTEIVHEK 826
>XP_017236137.1 PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X1
[Daucus carota subsp. sativus] KZN07292.1 hypothetical
protein DCAR_008129 [Daucus carota subsp. sativus]
Length = 986
Score = 303 bits (775), Expect = 4e-93
Identities = 150/234 (64%), Positives = 171/234 (73%)
Frame = +3
Query: 6 VLQPPLVMHQEVQPNLVPPAAISTPSHLRLSHLNHGYIPQSHGPFVSTVFLNPTPSMQSS 185
VL+PP M VQ N++PP +STPS + GY P PFV+T F+NP P MQSS
Sbjct: 658 VLRPPYQMRPNVQQNMIPPVGMSTPSQVAYQPFGRGYAPPGQRPFVNTGFMNPAPGMQSS 717
Query: 186 PPILKIQNTSMHXXXXXXXXXXXXXXXXSSQMIPTSENPSFIASHPPAGGAFSGLFSSLM 365
PIL ++N+ H SSQMIPT +NPS +A +P GGA SGLF+SLM
Sbjct: 718 MPILNVRNSPAHLPGVGLPPLPPEPRPVSSQMIPT-QNPSLVALNPSGGGALSGLFNSLM 776
Query: 366 AQGLISLTNQAPIQDHVGLEFNSDLLKVRYESAITALYTCLPRQCTTCGLRFKCQEEHSS 545
AQGLISLTNQA +QD VGLEFN+DLLKVR+ESAI+ALY LPRQCTTCGLRFKCQEEHSS
Sbjct: 777 AQGLISLTNQASVQDPVGLEFNTDLLKVRHESAISALYADLPRQCTTCGLRFKCQEEHSS 836
Query: 546 HMDWHVTKNRISKIHKQKPSRKWFVSVNMWLSGAEALGVDAVPGFLPTENVTEK 707
HMDWHVT+NR SK KQKPSR+WFVS +MWLSG EALG DA PGFLPTE V EK
Sbjct: 837 HMDWHVTRNRTSKNRKQKPSRRWFVSADMWLSGTEALGADAAPGFLPTEIVHEK 890
>XP_010275999.1 PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X2
[Nelumbo nucifera]
Length = 895
Score = 271 bits (693), Expect = 7e-82
Identities = 140/229 (61%), Positives = 157/229 (68%), Gaps = 1/229 (0%)
Frame = +3
Query: 24 VMHQEVQPNLVPPAAISTPSHLRLSHLNHGYIPQSHGPFVSTVFLNPTPSMQSSPPILK- 200
+M Q Q N VP A +H LNHG+IPQ H S++ NP P + SS +
Sbjct: 571 LMSQNAQENFVPSAVAQMSTHKMEQPLNHGHIPQGHLSVTSSILPNPIPGLASSSVTIHG 630
Query: 201 IQNTSMHXXXXXXXXXXXXXXXXSSQMIPTSENPSFIASHPPAGGAFSGLFSSLMAQGLI 380
+ NT H SSQ+ P S+N IA+H +G AFSGL SSLMAQGLI
Sbjct: 631 LSNTPFHLPGRALPPLPPGPPPVSSQIEPISQNVGPIATHASSGSAFSGLISSLMAQGLI 690
Query: 381 SLTNQAPIQDHVGLEFNSDLLKVRYESAITALYTCLPRQCTTCGLRFKCQEEHSSHMDWH 560
SLT A +QD +G+EFN DLLKVR+ESAI ALY LPRQCTTCGLRFKCQEEHSSHMDWH
Sbjct: 691 SLTTPASVQDSIGVEFNLDLLKVRHESAIKALYADLPRQCTTCGLRFKCQEEHSSHMDWH 750
Query: 561 VTKNRISKIHKQKPSRKWFVSVNMWLSGAEALGVDAVPGFLPTENVTEK 707
VTKNRISK KQKPSRKWFVS N+WLSGAEALGVDAVPGFLPTE V EK
Sbjct: 751 VTKNRISKSRKQKPSRKWFVSTNVWLSGAEALGVDAVPGFLPTEAVAEK 799
>XP_019054573.1 PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
X3 [Nelumbo nucifera]
Length = 906
Score = 270 bits (690), Expect = 2e-81
Identities = 139/236 (58%), Positives = 163/236 (69%), Gaps = 1/236 (0%)
Frame = +3
Query: 3 AVLQPPLVMHQEVQPNLVPPAAISTPSHLRLSHLNHGYIPQSHGPFVSTVFLNPTPSMQ- 179
++LQ L++ Q Q NLVPPA SH+ L++G++ Q HGP VS++ N P +
Sbjct: 568 SLLQQQLLLSQNAQENLVPPATSRISSHMMEQFLSNGHMRQGHGPVVSSILSNSIPGIPP 627
Query: 180 SSPPILKIQNTSMHXXXXXXXXXXXXXXXXSSQMIPTSENPSFIASHPPAGGAFSGLFSS 359
SS I NT H S QM P ++N IASHP G AFSGL S
Sbjct: 628 SSVTSHGISNTRFHLQGQALPPLPPGPPPASLQMGPITQNVGPIASHPSTGSAFSGLIGS 687
Query: 360 LMAQGLISLTNQAPIQDHVGLEFNSDLLKVRYESAITALYTCLPRQCTTCGLRFKCQEEH 539
L+AQGLISLT AP+QD VG+EFN DLLKVR+ESAI ALY LPRQCTTCGLRFKCQEEH
Sbjct: 688 LVAQGLISLTALAPVQDSVGVEFNPDLLKVRHESAIKALYDDLPRQCTTCGLRFKCQEEH 747
Query: 540 SSHMDWHVTKNRISKIHKQKPSRKWFVSVNMWLSGAEALGVDAVPGFLPTENVTEK 707
S+HMDWHVTKNRISK KQKPSRKWF++ ++WLSGAEALG DAVPGFLPTE + EK
Sbjct: 748 STHMDWHVTKNRISKNRKQKPSRKWFITTSVWLSGAEALGTDAVPGFLPTEAIVEK 803
>XP_010275998.1 PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X1
[Nelumbo nucifera]
Length = 1071
Score = 271 bits (693), Expect = 6e-81
Identities = 140/229 (61%), Positives = 157/229 (68%), Gaps = 1/229 (0%)
Frame = +3
Query: 24 VMHQEVQPNLVPPAAISTPSHLRLSHLNHGYIPQSHGPFVSTVFLNPTPSMQSSPPILK- 200
+M Q Q N VP A +H LNHG+IPQ H S++ NP P + SS +
Sbjct: 747 LMSQNAQENFVPSAVAQMSTHKMEQPLNHGHIPQGHLSVTSSILPNPIPGLASSSVTIHG 806
Query: 201 IQNTSMHXXXXXXXXXXXXXXXXSSQMIPTSENPSFIASHPPAGGAFSGLFSSLMAQGLI 380
+ NT H SSQ+ P S+N IA+H +G AFSGL SSLMAQGLI
Sbjct: 807 LSNTPFHLPGRALPPLPPGPPPVSSQIEPISQNVGPIATHASSGSAFSGLISSLMAQGLI 866
Query: 381 SLTNQAPIQDHVGLEFNSDLLKVRYESAITALYTCLPRQCTTCGLRFKCQEEHSSHMDWH 560
SLT A +QD +G+EFN DLLKVR+ESAI ALY LPRQCTTCGLRFKCQEEHSSHMDWH
Sbjct: 867 SLTTPASVQDSIGVEFNLDLLKVRHESAIKALYADLPRQCTTCGLRFKCQEEHSSHMDWH 926
Query: 561 VTKNRISKIHKQKPSRKWFVSVNMWLSGAEALGVDAVPGFLPTENVTEK 707
VTKNRISK KQKPSRKWFVS N+WLSGAEALGVDAVPGFLPTE V EK
Sbjct: 927 VTKNRISKSRKQKPSRKWFVSTNVWLSGAEALGVDAVPGFLPTEAVAEK 975
>OAY24701.1 hypothetical protein MANES_17G036600 [Manihot esculenta]
Length = 1027
Score = 270 bits (690), Expect = 1e-80
Identities = 143/233 (61%), Positives = 161/233 (69%)
Frame = +3
Query: 12 QPPLVMHQEVQPNLVPPAAISTPSHLRLSHLNHGYIPQSHGPFVSTVFLNPTPSMQSSPP 191
QP ++ E + NL P A S PSH LNHGY + HG +S N PS Q P
Sbjct: 702 QPQFLLSNEARENLQPSVA-SVPSHPVALPLNHGYAVRGHGAVMSMAPSNIVPSRQFPLP 760
Query: 192 ILKIQNTSMHXXXXXXXXXXXXXXXXSSQMIPTSENPSFIASHPPAGGAFSGLFSSLMAQ 371
+ I NT +H +SQ+I +N +AS P GGAFSGL +SLMAQ
Sbjct: 761 VNNILNT-LHSQGGVRPPLPPGPPP-ASQVILNPQNAGAVASSQPPGGAFSGLINSLMAQ 818
Query: 372 GLISLTNQAPIQDHVGLEFNSDLLKVRYESAITALYTCLPRQCTTCGLRFKCQEEHSSHM 551
GLISLTNQ P+QD VGLEFN+DLLKVRYES I+ALY LPRQCTTCGLRFKCQEEHSSHM
Sbjct: 819 GLISLTNQTPVQDAVGLEFNADLLKVRYESGISALYADLPRQCTTCGLRFKCQEEHSSHM 878
Query: 552 DWHVTKNRISKIHKQKPSRKWFVSVNMWLSGAEALGVDAVPGFLPTENVTEKK 710
DWHVTKNR+SK KQKPSRKWFVS +MWLSGAEALG DAVPGFLPTE + EKK
Sbjct: 879 DWHVTKNRMSKNRKQKPSRKWFVSASMWLSGAEALGTDAVPGFLPTETIVEKK 931
>XP_010267732.1 PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
X2 [Nelumbo nucifera]
Length = 1049
Score = 270 bits (690), Expect = 1e-80
Identities = 139/236 (58%), Positives = 163/236 (69%), Gaps = 1/236 (0%)
Frame = +3
Query: 3 AVLQPPLVMHQEVQPNLVPPAAISTPSHLRLSHLNHGYIPQSHGPFVSTVFLNPTPSMQ- 179
++LQ L++ Q Q NLVPPA SH+ L++G++ Q HGP VS++ N P +
Sbjct: 720 SLLQQQLLLSQNAQENLVPPATSRISSHMMEQFLSNGHMRQGHGPVVSSILSNSIPGIPP 779
Query: 180 SSPPILKIQNTSMHXXXXXXXXXXXXXXXXSSQMIPTSENPSFIASHPPAGGAFSGLFSS 359
SS I NT H S QM P ++N IASHP G AFSGL S
Sbjct: 780 SSVTSHGISNTRFHLQGQALPPLPPGPPPASLQMGPITQNVGPIASHPSTGSAFSGLIGS 839
Query: 360 LMAQGLISLTNQAPIQDHVGLEFNSDLLKVRYESAITALYTCLPRQCTTCGLRFKCQEEH 539
L+AQGLISLT AP+QD VG+EFN DLLKVR+ESAI ALY LPRQCTTCGLRFKCQEEH
Sbjct: 840 LVAQGLISLTALAPVQDSVGVEFNPDLLKVRHESAIKALYDDLPRQCTTCGLRFKCQEEH 899
Query: 540 SSHMDWHVTKNRISKIHKQKPSRKWFVSVNMWLSGAEALGVDAVPGFLPTENVTEK 707
S+HMDWHVTKNRISK KQKPSRKWF++ ++WLSGAEALG DAVPGFLPTE + EK
Sbjct: 900 STHMDWHVTKNRISKNRKQKPSRKWFITTSVWLSGAEALGTDAVPGFLPTEAIVEK 955
>XP_010267731.1 PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
X1 [Nelumbo nucifera]
Length = 1058
Score = 270 bits (690), Expect = 1e-80
Identities = 139/236 (58%), Positives = 163/236 (69%), Gaps = 1/236 (0%)
Frame = +3
Query: 3 AVLQPPLVMHQEVQPNLVPPAAISTPSHLRLSHLNHGYIPQSHGPFVSTVFLNPTPSMQ- 179
++LQ L++ Q Q NLVPPA SH+ L++G++ Q HGP VS++ N P +
Sbjct: 720 SLLQQQLLLSQNAQENLVPPATSRISSHMMEQFLSNGHMRQGHGPVVSSILSNSIPGIPP 779
Query: 180 SSPPILKIQNTSMHXXXXXXXXXXXXXXXXSSQMIPTSENPSFIASHPPAGGAFSGLFSS 359
SS I NT H S QM P ++N IASHP G AFSGL S
Sbjct: 780 SSVTSHGISNTRFHLQGQALPPLPPGPPPASLQMGPITQNVGPIASHPSTGSAFSGLIGS 839
Query: 360 LMAQGLISLTNQAPIQDHVGLEFNSDLLKVRYESAITALYTCLPRQCTTCGLRFKCQEEH 539
L+AQGLISLT AP+QD VG+EFN DLLKVR+ESAI ALY LPRQCTTCGLRFKCQEEH
Sbjct: 840 LVAQGLISLTALAPVQDSVGVEFNPDLLKVRHESAIKALYDDLPRQCTTCGLRFKCQEEH 899
Query: 540 SSHMDWHVTKNRISKIHKQKPSRKWFVSVNMWLSGAEALGVDAVPGFLPTENVTEK 707
S+HMDWHVTKNRISK KQKPSRKWF++ ++WLSGAEALG DAVPGFLPTE + EK
Sbjct: 900 STHMDWHVTKNRISKNRKQKPSRKWFITTSVWLSGAEALGTDAVPGFLPTEAIVEK 955
>XP_008224793.1 PREDICTED: LOW QUALITY PROTEIN: polyadenylation and cleavage factor
homolog 4 [Prunus mume]
Length = 1002
Score = 267 bits (683), Expect = 7e-80
Identities = 137/234 (58%), Positives = 160/234 (68%)
Frame = +3
Query: 9 LQPPLVMHQEVQPNLVPPAAISTPSHLRLSHLNHGYIPQSHGPFVSTVFLNPTPSMQSSP 188
LQP + QE + N + A P +L L LNHGY Q HG VSTV NP P + P
Sbjct: 693 LQPQFLPPQEARENFISSAETPGPPYLGLPSLNHGYNLQGHGGAVSTVMANPVPRIPYVP 752
Query: 189 PILKIQNTSMHXXXXXXXXXXXXXXXXSSQMIPTSENPSFIASHPPAGGAFSGLFSSLMA 368
N+++H SSQ I + +NP + S G A+SGLFSSLMA
Sbjct: 753 ------NSALHLRGEALPPLPPGPPPPSSQGILSIQNPGPVVSSNQPGSAYSGLFSSLMA 806
Query: 369 QGLISLTNQAPIQDHVGLEFNSDLLKVRYESAITALYTCLPRQCTTCGLRFKCQEEHSSH 548
QGLISLTNQ+ +QD VG+EFN+DLLKVR+ES I ALY+ LPRQCTTCGLRFKCQEEHSSH
Sbjct: 807 QGLISLTNQSTVQDSVGIEFNADLLKVRHESVIKALYSDLPRQCTTCGLRFKCQEEHSSH 866
Query: 549 MDWHVTKNRISKIHKQKPSRKWFVSVNMWLSGAEALGVDAVPGFLPTENVTEKK 710
MDWHVTKNR+SK KQKPSRKWFV+ +MWLSGAEALG DAVPGF+P E + EKK
Sbjct: 867 MDWHVTKNRMSKNRKQKPSRKWFVNTSMWLSGAEALGTDAVPGFMPAETIVEKK 920
>XP_016550983.1 PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X2
[Capsicum annuum]
Length = 968
Score = 264 bits (675), Expect = 7e-79
Identities = 136/236 (57%), Positives = 162/236 (68%)
Frame = +3
Query: 3 AVLQPPLVMHQEVQPNLVPPAAISTPSHLRLSHLNHGYIPQSHGPFVSTVFLNPTPSMQS 182
A +P L++ Q + P A++ + +HL L + + Y P G + T+F P P+ Q
Sbjct: 640 ASAEPQLLLSQRIHQTTPPSASLPSSNHLLLPPI-YRYPPPGPGSSIGTLFPRPVPAPQV 698
Query: 183 SPPILKIQNTSMHXXXXXXXXXXXXXXXXSSQMIPTSENPSFIASHPPAGGAFSGLFSSL 362
S P++ + NTS S Q +PTS+N + + +PPAGG FS L SSL
Sbjct: 699 SMPLVNVPNTSSQFSSGALPPLPRGPLPMSFQFMPTSQNLAPVTPNPPAGG-FSSLISSL 757
Query: 363 MAQGLISLTNQAPIQDHVGLEFNSDLLKVRYESAITALYTCLPRQCTTCGLRFKCQEEHS 542
MAQGLISLTNQAP QD VGL+FN DLLKVR++SA+TALY LPRQCTTCGLRFKCQE HS
Sbjct: 758 MAQGLISLTNQAPAQDSVGLDFNPDLLKVRHDSAVTALYADLPRQCTTCGLRFKCQESHS 817
Query: 543 SHMDWHVTKNRISKIHKQKPSRKWFVSVNMWLSGAEALGVDAVPGFLPTENVTEKK 710
SHMDWHVTKNR+SK KQK SRKWFVSVNMWLSG EALG DAVPGFLPTE V E K
Sbjct: 818 SHMDWHVTKNRVSKNRKQKSSRKWFVSVNMWLSGTEALGSDAVPGFLPTEQVVETK 873
>XP_016550981.1 PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X1
[Capsicum annuum] XP_016550982.1 PREDICTED:
polyadenylation and cleavage factor homolog 4 isoform X1
[Capsicum annuum]
Length = 977
Score = 264 bits (675), Expect = 8e-79
Identities = 136/236 (57%), Positives = 162/236 (68%)
Frame = +3
Query: 3 AVLQPPLVMHQEVQPNLVPPAAISTPSHLRLSHLNHGYIPQSHGPFVSTVFLNPTPSMQS 182
A +P L++ Q + P A++ + +HL L + + Y P G + T+F P P+ Q
Sbjct: 649 ASAEPQLLLSQRIHQTTPPSASLPSSNHLLLPPI-YRYPPPGPGSSIGTLFPRPVPAPQV 707
Query: 183 SPPILKIQNTSMHXXXXXXXXXXXXXXXXSSQMIPTSENPSFIASHPPAGGAFSGLFSSL 362
S P++ + NTS S Q +PTS+N + + +PPAGG FS L SSL
Sbjct: 708 SMPLVNVPNTSSQFSSGALPPLPRGPLPMSFQFMPTSQNLAPVTPNPPAGG-FSSLISSL 766
Query: 363 MAQGLISLTNQAPIQDHVGLEFNSDLLKVRYESAITALYTCLPRQCTTCGLRFKCQEEHS 542
MAQGLISLTNQAP QD VGL+FN DLLKVR++SA+TALY LPRQCTTCGLRFKCQE HS
Sbjct: 767 MAQGLISLTNQAPAQDSVGLDFNPDLLKVRHDSAVTALYADLPRQCTTCGLRFKCQESHS 826
Query: 543 SHMDWHVTKNRISKIHKQKPSRKWFVSVNMWLSGAEALGVDAVPGFLPTENVTEKK 710
SHMDWHVTKNR+SK KQK SRKWFVSVNMWLSG EALG DAVPGFLPTE V E K
Sbjct: 827 SHMDWHVTKNRVSKNRKQKSSRKWFVSVNMWLSGTEALGSDAVPGFLPTEQVVETK 882
>ONI10047.1 hypothetical protein PRUPE_4G024700 [Prunus persica]
Length = 1017
Score = 265 bits (676), Expect = 9e-79
Identities = 136/234 (58%), Positives = 158/234 (67%)
Frame = +3
Query: 9 LQPPLVMHQEVQPNLVPPAAISTPSHLRLSHLNHGYIPQSHGPFVSTVFLNPTPSMQSSP 188
LQP + QE + N + A S P +L L LNH Y Q HG VSTV NP P + P
Sbjct: 694 LQPQFLPPQEARENFISSAETSGPPYLGLPSLNHRYTLQGHGGAVSTVMANPVPRIPYVP 753
Query: 189 PILKIQNTSMHXXXXXXXXXXXXXXXXSSQMIPTSENPSFIASHPPAGGAFSGLFSSLMA 368
N+++H SSQ I + NP + S G A+SGLFSSLMA
Sbjct: 754 ------NSALHLRGEALPPLPPGPPPPSSQGILSIRNPGPVVSSNQPGSAYSGLFSSLMA 807
Query: 369 QGLISLTNQAPIQDHVGLEFNSDLLKVRYESAITALYTCLPRQCTTCGLRFKCQEEHSSH 548
QGLISLTNQ+ +QD VG+EFN+DLLKVR+ES I ALY+ LPRQCTTCGLRFKCQEEHSSH
Sbjct: 808 QGLISLTNQSTVQDSVGIEFNADLLKVRHESVIKALYSDLPRQCTTCGLRFKCQEEHSSH 867
Query: 549 MDWHVTKNRISKIHKQKPSRKWFVSVNMWLSGAEALGVDAVPGFLPTENVTEKK 710
MDWHVTKNR+SK KQKPSRKWFV+ +MWLSGAEALG DA PGF+P E + EKK
Sbjct: 868 MDWHVTKNRMSKNRKQKPSRKWFVNTSMWLSGAEALGTDAAPGFMPAETIVEKK 921
>XP_007213705.1 hypothetical protein PRUPE_ppa000684mg [Prunus persica]
Length = 1037
Score = 265 bits (676), Expect = 1e-78
Identities = 136/234 (58%), Positives = 158/234 (67%)
Frame = +3
Query: 9 LQPPLVMHQEVQPNLVPPAAISTPSHLRLSHLNHGYIPQSHGPFVSTVFLNPTPSMQSSP 188
LQP + QE + N + A S P +L L LNH Y Q HG VSTV NP P + P
Sbjct: 714 LQPQFLPPQEARENFISSAETSGPPYLGLPSLNHRYTLQGHGGAVSTVMANPVPRIPYVP 773
Query: 189 PILKIQNTSMHXXXXXXXXXXXXXXXXSSQMIPTSENPSFIASHPPAGGAFSGLFSSLMA 368
N+++H SSQ I + NP + S G A+SGLFSSLMA
Sbjct: 774 ------NSALHLRGEALPPLPPGPPPPSSQGILSIRNPGPVVSSNQPGSAYSGLFSSLMA 827
Query: 369 QGLISLTNQAPIQDHVGLEFNSDLLKVRYESAITALYTCLPRQCTTCGLRFKCQEEHSSH 548
QGLISLTNQ+ +QD VG+EFN+DLLKVR+ES I ALY+ LPRQCTTCGLRFKCQEEHSSH
Sbjct: 828 QGLISLTNQSTVQDSVGIEFNADLLKVRHESVIKALYSDLPRQCTTCGLRFKCQEEHSSH 887
Query: 549 MDWHVTKNRISKIHKQKPSRKWFVSVNMWLSGAEALGVDAVPGFLPTENVTEKK 710
MDWHVTKNR+SK KQKPSRKWFV+ +MWLSGAEALG DA PGF+P E + EKK
Sbjct: 888 MDWHVTKNRMSKNRKQKPSRKWFVNTSMWLSGAEALGTDAAPGFMPAETIVEKK 941
>XP_006467998.1 PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X5
[Citrus sinensis]
Length = 941
Score = 262 bits (670), Expect = 3e-78
Identities = 131/228 (57%), Positives = 153/228 (67%)
Frame = +3
Query: 27 MHQEVQPNLVPPAAISTPSHLRLSHLNHGYIPQSHGPFVSTVFLNPTPSMQSSPPILKIQ 206
+ QE N +P A S P H L+HGY + H + V NP P+ Q + IQ
Sbjct: 618 LSQEATNNFLPSIAASMPPHPLAPPLSHGYTQRGHNAVMGMVSSNPVPAGQQPLHVQSIQ 677
Query: 207 NTSMHXXXXXXXXXXXXXXXXSSQMIPTSENPSFIASHPPAGGAFSGLFSSLMAQGLISL 386
N+S+H SSQMIP S++ + G AFSGL SSLMAQGLISL
Sbjct: 678 NSSLHLQGRPAPPLPPGPPPASSQMIPGSQSAGLVVPSQQPGHAFSGLISSLMAQGLISL 737
Query: 387 TNQAPIQDHVGLEFNSDLLKVRYESAITALYTCLPRQCTTCGLRFKCQEEHSSHMDWHVT 566
T Q P+QD VGLEFN+DL K+R+ESAI++LY LPRQCTTCGLRFKCQEEHSSHMDWHVT
Sbjct: 738 TTQTPVQDSVGLEFNADLHKLRHESAISSLYANLPRQCTTCGLRFKCQEEHSSHMDWHVT 797
Query: 567 KNRISKIHKQKPSRKWFVSVNMWLSGAEALGVDAVPGFLPTENVTEKK 710
KNR+SK KQKPSRKWFVS +MWLSG EALG DA+PGFLP E + EKK
Sbjct: 798 KNRMSKNRKQKPSRKWFVSASMWLSGTEALGTDAIPGFLPAEPIVEKK 845
>XP_010655357.1 PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X1
[Vitis vinifera]
Length = 1046
Score = 263 bits (673), Expect = 3e-78
Identities = 136/231 (58%), Positives = 152/231 (65%)
Frame = +3
Query: 18 PLVMHQEVQPNLVPPAAISTPSHLRLSHLNHGYIPQSHGPFVSTVFLNPTPSMQSSPPIL 197
P + QE N VP S+ LN GY PQ H ST+ LNP P + SS PI
Sbjct: 720 PQFLPQETHGNFVPSTTAPVSSYSVAPPLNPGYTPQGHAAATSTILLNPVPGVHSSIPIH 779
Query: 198 KIQNTSMHXXXXXXXXXXXXXXXXSSQMIPTSENPSFIASHPPAGGAFSGLFSSLMAQGL 377
I N+S+H +SQMI +N I S+ G A SGL SSLMAQGL
Sbjct: 780 NISNSSVHFQGGALPPLPPGPPPATSQMINIPQNTGPIVSNQQPGSALSGLISSLMAQGL 839
Query: 378 ISLTNQAPIQDHVGLEFNSDLLKVRYESAITALYTCLPRQCTTCGLRFKCQEEHSSHMDW 557
ISL Q +QD VG+EFN DLLKVR+ESAI+ALY + RQCTTCGLRFKCQEEHSSHMDW
Sbjct: 840 ISLAKQPTVQDSVGIEFNVDLLKVRHESAISALYGDMSRQCTTCGLRFKCQEEHSSHMDW 899
Query: 558 HVTKNRISKIHKQKPSRKWFVSVNMWLSGAEALGVDAVPGFLPTENVTEKK 710
HVTKNRISK KQKPSRKWFVS +MWLS AEALG DAVPGFLPTE + EKK
Sbjct: 900 HVTKNRISKNRKQKPSRKWFVSASMWLSSAEALGTDAVPGFLPTETIAEKK 950
>XP_006467996.1 PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X2
[Citrus sinensis] XP_006467997.1 PREDICTED:
polyadenylation and cleavage factor homolog 4 isoform X3
[Citrus sinensis] XP_015382499.1 PREDICTED:
polyadenylation and cleavage factor homolog 4 isoform X4
[Citrus sinensis]
Length = 975
Score = 262 bits (670), Expect = 4e-78
Identities = 131/228 (57%), Positives = 153/228 (67%)
Frame = +3
Query: 27 MHQEVQPNLVPPAAISTPSHLRLSHLNHGYIPQSHGPFVSTVFLNPTPSMQSSPPILKIQ 206
+ QE N +P A S P H L+HGY + H + V NP P+ Q + IQ
Sbjct: 652 LSQEATNNFLPSIAASMPPHPLAPPLSHGYTQRGHNAVMGMVSSNPVPAGQQPLHVQSIQ 711
Query: 207 NTSMHXXXXXXXXXXXXXXXXSSQMIPTSENPSFIASHPPAGGAFSGLFSSLMAQGLISL 386
N+S+H SSQMIP S++ + G AFSGL SSLMAQGLISL
Sbjct: 712 NSSLHLQGRPAPPLPPGPPPASSQMIPGSQSAGLVVPSQQPGHAFSGLISSLMAQGLISL 771
Query: 387 TNQAPIQDHVGLEFNSDLLKVRYESAITALYTCLPRQCTTCGLRFKCQEEHSSHMDWHVT 566
T Q P+QD VGLEFN+DL K+R+ESAI++LY LPRQCTTCGLRFKCQEEHSSHMDWHVT
Sbjct: 772 TTQTPVQDSVGLEFNADLHKLRHESAISSLYANLPRQCTTCGLRFKCQEEHSSHMDWHVT 831
Query: 567 KNRISKIHKQKPSRKWFVSVNMWLSGAEALGVDAVPGFLPTENVTEKK 710
KNR+SK KQKPSRKWFVS +MWLSG EALG DA+PGFLP E + EKK
Sbjct: 832 KNRMSKNRKQKPSRKWFVSASMWLSGTEALGTDAIPGFLPAEPIVEKK 879
>XP_015382498.1 PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X1
[Citrus sinensis]
Length = 1012
Score = 262 bits (670), Expect = 6e-78
Identities = 131/228 (57%), Positives = 153/228 (67%)
Frame = +3
Query: 27 MHQEVQPNLVPPAAISTPSHLRLSHLNHGYIPQSHGPFVSTVFLNPTPSMQSSPPILKIQ 206
+ QE N +P A S P H L+HGY + H + V NP P+ Q + IQ
Sbjct: 689 LSQEATNNFLPSIAASMPPHPLAPPLSHGYTQRGHNAVMGMVSSNPVPAGQQPLHVQSIQ 748
Query: 207 NTSMHXXXXXXXXXXXXXXXXSSQMIPTSENPSFIASHPPAGGAFSGLFSSLMAQGLISL 386
N+S+H SSQMIP S++ + G AFSGL SSLMAQGLISL
Sbjct: 749 NSSLHLQGRPAPPLPPGPPPASSQMIPGSQSAGLVVPSQQPGHAFSGLISSLMAQGLISL 808
Query: 387 TNQAPIQDHVGLEFNSDLLKVRYESAITALYTCLPRQCTTCGLRFKCQEEHSSHMDWHVT 566
T Q P+QD VGLEFN+DL K+R+ESAI++LY LPRQCTTCGLRFKCQEEHSSHMDWHVT
Sbjct: 809 TTQTPVQDSVGLEFNADLHKLRHESAISSLYANLPRQCTTCGLRFKCQEEHSSHMDWHVT 868
Query: 567 KNRISKIHKQKPSRKWFVSVNMWLSGAEALGVDAVPGFLPTENVTEKK 710
KNR+SK KQKPSRKWFVS +MWLSG EALG DA+PGFLP E + EKK
Sbjct: 869 KNRMSKNRKQKPSRKWFVSASMWLSGTEALGTDAIPGFLPAEPIVEKK 916
>XP_006449074.1 hypothetical protein CICLE_v10014158mg [Citrus clementina] ESR62314.1
hypothetical protein CICLE_v10014158mg [Citrus
clementina]
Length = 975
Score = 261 bits (668), Expect = 7e-78
Identities = 131/228 (57%), Positives = 153/228 (67%)
Frame = +3
Query: 27 MHQEVQPNLVPPAAISTPSHLRLSHLNHGYIPQSHGPFVSTVFLNPTPSMQSSPPILKIQ 206
+ QE +P A S P HL L+HGY + H + V NP P+ Q + IQ
Sbjct: 652 LSQEATNKFLPSIAASMPPHLLAPPLSHGYTQRGHNAVMGMVPSNPVPAGQQPLHVQSIQ 711
Query: 207 NTSMHXXXXXXXXXXXXXXXXSSQMIPTSENPSFIASHPPAGGAFSGLFSSLMAQGLISL 386
N+S+H SSQMIP S++ + G AFSGL SSLMAQGLISL
Sbjct: 712 NSSLHLQGRPSPPLPPGPPPASSQMIPGSQSAGLVVPSQQPGHAFSGLISSLMAQGLISL 771
Query: 387 TNQAPIQDHVGLEFNSDLLKVRYESAITALYTCLPRQCTTCGLRFKCQEEHSSHMDWHVT 566
T Q P+QD VGLEFN+DL K+R+ESAI++LY LPRQCTTCGLRFKCQEEHSSHMDWHVT
Sbjct: 772 TTQTPVQDSVGLEFNADLHKLRHESAISSLYANLPRQCTTCGLRFKCQEEHSSHMDWHVT 831
Query: 567 KNRISKIHKQKPSRKWFVSVNMWLSGAEALGVDAVPGFLPTENVTEKK 710
KNR+SK KQKPSRKWFVS +MWLSG EALG DA+PGFLP E + EKK
Sbjct: 832 KNRMSKNRKQKPSRKWFVSASMWLSGTEALGTDAIPGFLPAEPILEKK 879
>EOY28631.1 PCF11P-similar protein 4, putative isoform 2 [Theobroma cacao]
Length = 733
Score = 256 bits (655), Expect = 2e-77
Identities = 134/234 (57%), Positives = 156/234 (66%)
Frame = +3
Query: 9 LQPPLVMHQEVQPNLVPPAAISTPSHLRLSHLNHGYIPQSHGPFVSTVFLNPTPSMQSSP 188
LQP + Q+++ N + A P L LNHGY PQ HG +S V NP Q
Sbjct: 405 LQPHFLPSQDLRENFLSSATAPLPPRLLAPSLNHGYTPQMHGAVISMVPSNPIHVAQPPL 464
Query: 189 PILKIQNTSMHXXXXXXXXXXXXXXXXSSQMIPTSENPSFIASHPPAGGAFSGLFSSLMA 368
PI + S+ +SQMIP ++N + + G +SGL SSLMA
Sbjct: 465 PIPNMPTVSLQLQGGALPPLPPGPPP-ASQMIPATQNAGPLLPNQAQSGPYSGLISSLMA 523
Query: 369 QGLISLTNQAPIQDHVGLEFNSDLLKVRYESAITALYTCLPRQCTTCGLRFKCQEEHSSH 548
QGLISLT PIQD VGLEFN+DLLKVR+ES+I+ALY LPRQCTTCGLRFK QEEHS+H
Sbjct: 524 QGLISLTKPTPIQDPVGLEFNADLLKVRHESSISALYADLPRQCTTCGLRFKFQEEHSTH 583
Query: 549 MDWHVTKNRISKIHKQKPSRKWFVSVNMWLSGAEALGVDAVPGFLPTENVTEKK 710
MDWHVT+NR+SK KQKPSRKWFVS +MWLSGAEALG DAVPGFLPTENV EKK
Sbjct: 584 MDWHVTRNRMSKNRKQKPSRKWFVSASMWLSGAEALGTDAVPGFLPTENVVEKK 637
>XP_019257117.1 PREDICTED: polyadenylation and cleavage factor homolog 4 [Nicotiana
attenuata] OIS96062.1 polyadenylation and cleavage factor
-like 4 [Nicotiana attenuata]
Length = 982
Score = 260 bits (664), Expect = 3e-77
Identities = 139/236 (58%), Positives = 157/236 (66%)
Frame = +3
Query: 3 AVLQPPLVMHQEVQPNLVPPAAISTPSHLRLSHLNHGYIPQSHGPFVSTVFLNPTPSMQS 182
A + L+ Q + VP A+I +HL L + +GY PQ G V T+ P Q
Sbjct: 654 APAESQLLFSQRMHQTTVPSASIPASNHLLLPPI-YGYNPQGPGSSVGTLLPLPVSGPQV 712
Query: 183 SPPILKIQNTSMHXXXXXXXXXXXXXXXXSSQMIPTSENPSFIASHPPAGGAFSGLFSSL 362
S P++ I NTS SSQ PTS+N + +PPAGG FS L SSL
Sbjct: 713 SLPLVNIPNTSSQFSSGAFPPLPRGPLPMSSQFTPTSQNLGQVTPNPPAGG-FSSLISSL 771
Query: 363 MAQGLISLTNQAPIQDHVGLEFNSDLLKVRYESAITALYTCLPRQCTTCGLRFKCQEEHS 542
MAQGLISLTNQAP QD VGL+FN DLLKVR++SA+TALY LPRQC TCGLRFKCQE HS
Sbjct: 772 MAQGLISLTNQAPPQDSVGLDFNPDLLKVRHDSAVTALYADLPRQCKTCGLRFKCQEAHS 831
Query: 543 SHMDWHVTKNRISKIHKQKPSRKWFVSVNMWLSGAEALGVDAVPGFLPTENVTEKK 710
SHMDWHVTKNR+SK KQK SRKWFVSVNMWLSG EALG DA PGFLPTE V EKK
Sbjct: 832 SHMDWHVTKNRVSKNRKQKSSRKWFVSVNMWLSGTEALGSDAAPGFLPTEQVVEKK 887