BLASTX nr result

ID: Panax25_contig00029522 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00029522
         (394 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017253810.1 PREDICTED: protein SAWADEE HOMEODOMAIN HOMOLOG 2-...    54   6e-06
XP_017253809.1 PREDICTED: protein SAWADEE HOMEODOMAIN HOMOLOG 2-...    54   6e-06
KZM96341.1 hypothetical protein DCAR_019583 [Daucus carota subsp...    54   6e-06

>XP_017253810.1 PREDICTED: protein SAWADEE HOMEODOMAIN HOMOLOG 2-like isoform X2
           [Daucus carota subsp. sativus]
          Length = 526

 Score = 54.3 bits (129), Expect = 6e-06
 Identities = 43/121 (35%), Positives = 59/121 (48%)
 Frame = +1

Query: 25  AIVVPAASHTNLPAVTEIKVQQPKVTEIINAGNLGNSNVQPGNIVMQPKVEIMDAGTPEI 204
           A+ V  A + +LP    IKV  P   E  +AGN   S++ P         E+M+   P  
Sbjct: 392 AMEVSDAGNNSLPPQV-IKVSSPVTMETSDAGN---SSLHP---------EVMENVGPST 438

Query: 205 SNVSPGNVVQQPEVTEIGKTSTLGSSNVPQRNVVQQHEVMEIVNDGNQGNSNLLQDNVVQ 384
           + +S    VQQP+VTEI     L S N     +V Q EV EIV+D + GNS +   N  Q
Sbjct: 439 TEISDAGGVQQPKVTEITNVGDLDSLNA-SPTIVMQQEVAEIVSDADLGNSPVPHVNDSQ 497

Query: 385 Q 387
           +
Sbjct: 498 E 498


>XP_017253809.1 PREDICTED: protein SAWADEE HOMEODOMAIN HOMOLOG 2-like isoform X1
           [Daucus carota subsp. sativus]
          Length = 529

 Score = 54.3 bits (129), Expect = 6e-06
 Identities = 43/121 (35%), Positives = 59/121 (48%)
 Frame = +1

Query: 25  AIVVPAASHTNLPAVTEIKVQQPKVTEIINAGNLGNSNVQPGNIVMQPKVEIMDAGTPEI 204
           A+ V  A + +LP    IKV  P   E  +AGN   S++ P         E+M+   P  
Sbjct: 395 AMEVSDAGNNSLPPQV-IKVSSPVTMETSDAGN---SSLHP---------EVMENVGPST 441

Query: 205 SNVSPGNVVQQPEVTEIGKTSTLGSSNVPQRNVVQQHEVMEIVNDGNQGNSNLLQDNVVQ 384
           + +S    VQQP+VTEI     L S N     +V Q EV EIV+D + GNS +   N  Q
Sbjct: 442 TEISDAGGVQQPKVTEITNVGDLDSLNA-SPTIVMQQEVAEIVSDADLGNSPVPHVNDSQ 500

Query: 385 Q 387
           +
Sbjct: 501 E 501


>KZM96341.1 hypothetical protein DCAR_019583 [Daucus carota subsp. sativus]
          Length = 797

 Score = 54.3 bits (129), Expect = 6e-06
 Identities = 43/121 (35%), Positives = 59/121 (48%)
 Frame = +1

Query: 25  AIVVPAASHTNLPAVTEIKVQQPKVTEIINAGNLGNSNVQPGNIVMQPKVEIMDAGTPEI 204
           A+ V  A + +LP    IKV  P   E  +AGN   S++ P         E+M+   P  
Sbjct: 663 AMEVSDAGNNSLPPQV-IKVSSPVTMETSDAGN---SSLHP---------EVMENVGPST 709

Query: 205 SNVSPGNVVQQPEVTEIGKTSTLGSSNVPQRNVVQQHEVMEIVNDGNQGNSNLLQDNVVQ 384
           + +S    VQQP+VTEI     L S N     +V Q EV EIV+D + GNS +   N  Q
Sbjct: 710 TEISDAGGVQQPKVTEITNVGDLDSLNA-SPTIVMQQEVAEIVSDADLGNSPVPHVNDSQ 768

Query: 385 Q 387
           +
Sbjct: 769 E 769


Top