BLASTX nr result

ID: Panax25_contig00029383 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00029383
         (456 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_010323032.1 PREDICTED: E3 ubiquitin-protein ligase SP1 isofor...    40   3e-06
XP_010323033.1 PREDICTED: E3 ubiquitin-protein ligase SP1 isofor...    40   3e-06
XP_016577360.1 PREDICTED: mitochondrial ubiquitin ligase activat...    40   3e-06
XP_010323035.1 PREDICTED: E3 ubiquitin-protein ligase SP1 isofor...    40   3e-06
XP_016577362.1 PREDICTED: mitochondrial ubiquitin ligase activat...    40   3e-06
XP_006352786.1 PREDICTED: mitochondrial ubiquitin ligase activat...    40   3e-06
XP_016577363.1 PREDICTED: uncharacterized protein LOC107875249 [...    40   3e-06

>XP_010323032.1 PREDICTED: E3 ubiquitin-protein ligase SP1 isoform X1 [Solanum
           lycopersicum]
          Length = 389

 Score = 40.4 bits (93), Expect(2) = 3e-06
 Identities = 17/19 (89%), Positives = 19/19 (100%)
 Frame = -3

Query: 61  SDTPINCDYSGLQGVIVEE 5
           SDTPINC+YSGL+GVIVEE
Sbjct: 105 SDTPINCEYSGLRGVIVEE 123



 Score = 37.7 bits (86), Expect(2) = 3e-06
 Identities = 19/21 (90%), Positives = 19/21 (90%)
 Frame = -2

Query: 131 AQLLDTTLKVLPLVVTISGRV 69
           AQLLDT  KVLPLVVTISGRV
Sbjct: 83  AQLLDTASKVLPLVVTISGRV 103


>XP_010323033.1 PREDICTED: E3 ubiquitin-protein ligase SP1 isoform X2 [Solanum
           lycopersicum]
          Length = 381

 Score = 40.4 bits (93), Expect(2) = 3e-06
 Identities = 17/19 (89%), Positives = 19/19 (100%)
 Frame = -3

Query: 61  SDTPINCDYSGLQGVIVEE 5
           SDTPINC+YSGL+GVIVEE
Sbjct: 105 SDTPINCEYSGLRGVIVEE 123



 Score = 37.7 bits (86), Expect(2) = 3e-06
 Identities = 19/21 (90%), Positives = 19/21 (90%)
 Frame = -2

Query: 131 AQLLDTTLKVLPLVVTISGRV 69
           AQLLDT  KVLPLVVTISGRV
Sbjct: 83  AQLLDTASKVLPLVVTISGRV 103


>XP_016577360.1 PREDICTED: mitochondrial ubiquitin ligase activator of NFKB 1
           isoform X1 [Capsicum annuum]
          Length = 367

 Score = 40.4 bits (93), Expect(2) = 3e-06
 Identities = 17/19 (89%), Positives = 19/19 (100%)
 Frame = -3

Query: 61  SDTPINCDYSGLQGVIVEE 5
           SDTPINC+YSGL+GVIVEE
Sbjct: 90  SDTPINCEYSGLRGVIVEE 108



 Score = 37.7 bits (86), Expect(2) = 3e-06
 Identities = 19/21 (90%), Positives = 19/21 (90%)
 Frame = -2

Query: 131 AQLLDTTLKVLPLVVTISGRV 69
           AQLLDT  KVLPLVVTISGRV
Sbjct: 68  AQLLDTASKVLPLVVTISGRV 88


>XP_010323035.1 PREDICTED: E3 ubiquitin-protein ligase SP1 isoform X3 [Solanum
           lycopersicum]
          Length = 349

 Score = 40.4 bits (93), Expect(2) = 3e-06
 Identities = 17/19 (89%), Positives = 19/19 (100%)
 Frame = -3

Query: 61  SDTPINCDYSGLQGVIVEE 5
           SDTPINC+YSGL+GVIVEE
Sbjct: 65  SDTPINCEYSGLRGVIVEE 83



 Score = 37.7 bits (86), Expect(2) = 3e-06
 Identities = 19/21 (90%), Positives = 19/21 (90%)
 Frame = -2

Query: 131 AQLLDTTLKVLPLVVTISGRV 69
           AQLLDT  KVLPLVVTISGRV
Sbjct: 43  AQLLDTASKVLPLVVTISGRV 63


>XP_016577362.1 PREDICTED: mitochondrial ubiquitin ligase activator of NFKB 1
           isoform X2 [Capsicum annuum]
          Length = 342

 Score = 40.4 bits (93), Expect(2) = 3e-06
 Identities = 17/19 (89%), Positives = 19/19 (100%)
 Frame = -3

Query: 61  SDTPINCDYSGLQGVIVEE 5
           SDTPINC+YSGL+GVIVEE
Sbjct: 65  SDTPINCEYSGLRGVIVEE 83



 Score = 37.7 bits (86), Expect(2) = 3e-06
 Identities = 19/21 (90%), Positives = 19/21 (90%)
 Frame = -2

Query: 131 AQLLDTTLKVLPLVVTISGRV 69
           AQLLDT  KVLPLVVTISGRV
Sbjct: 43  AQLLDTASKVLPLVVTISGRV 63


>XP_006352786.1 PREDICTED: mitochondrial ubiquitin ligase activator of NFKB 1
           [Solanum tuberosum] XP_006352787.1 PREDICTED:
           mitochondrial ubiquitin ligase activator of NFKB 1
           [Solanum tuberosum] XP_006352788.1 PREDICTED:
           mitochondrial ubiquitin ligase activator of NFKB 1
           [Solanum tuberosum]
          Length = 342

 Score = 40.4 bits (93), Expect(2) = 3e-06
 Identities = 17/19 (89%), Positives = 19/19 (100%)
 Frame = -3

Query: 61  SDTPINCDYSGLQGVIVEE 5
           SDTPINC+YSGL+GVIVEE
Sbjct: 65  SDTPINCEYSGLRGVIVEE 83



 Score = 37.7 bits (86), Expect(2) = 3e-06
 Identities = 19/21 (90%), Positives = 19/21 (90%)
 Frame = -2

Query: 131 AQLLDTTLKVLPLVVTISGRV 69
           AQLLDT  KVLPLVVTISGRV
Sbjct: 43  AQLLDTASKVLPLVVTISGRV 63


>XP_016577363.1 PREDICTED: uncharacterized protein LOC107875249 [Capsicum annuum]
           XP_016577364.1 PREDICTED: uncharacterized protein
           LOC107875249 [Capsicum annuum] XP_016577365.1 PREDICTED:
           uncharacterized protein LOC107875249 [Capsicum annuum]
          Length = 241

 Score = 40.4 bits (93), Expect(2) = 3e-06
 Identities = 17/19 (89%), Positives = 19/19 (100%)
 Frame = -3

Query: 61  SDTPINCDYSGLQGVIVEE 5
           SDTPINC+YSGL+GVIVEE
Sbjct: 65  SDTPINCEYSGLRGVIVEE 83



 Score = 37.7 bits (86), Expect(2) = 3e-06
 Identities = 19/21 (90%), Positives = 19/21 (90%)
 Frame = -2

Query: 131 AQLLDTTLKVLPLVVTISGRV 69
           AQLLDT  KVLPLVVTISGRV
Sbjct: 43  AQLLDTASKVLPLVVTISGRV 63


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