BLASTX nr result

ID: Panax25_contig00029235 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00029235
         (1438 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_008443388.1 PREDICTED: TMV resistance protein N [Cucumis melo]      40   1e-05

>XP_008443388.1 PREDICTED: TMV resistance protein N [Cucumis melo]
          Length = 1139

 Score = 39.7 bits (91), Expect(2) = 1e-05
 Identities = 37/117 (31%), Positives = 49/117 (41%), Gaps = 24/117 (20%)
 Frame = -2

Query: 423 FRKVIPTEEYKLLSKEIIN-TKGLLLALEVIGRYL-----DETTNYWKKT*LTPNTQCGD 262
           FR   P+E +  LSK+++    GL LALEV+G +L     +E  +  KK    PN Q   
Sbjct: 366 FRNSYPSETFHQLSKQVVTYCGGLPLALEVLGSFLFGRSREEWEDTLKKLKKIPNDQIQK 425

Query: 261 SKST*NKL*WTHYYPIKFWNV------------------CGFFPENGIHDLMNKCLL 145
                      H Y   F +V                  CGFFP  GI  L+ +CLL
Sbjct: 426 KLRISFDGLNDHTYKDIFLDVSCFFIGMERNYVEQILDGCGFFPRIGISVLLQRCLL 482



 Score = 39.7 bits (91), Expect(2) = 1e-05
 Identities = 21/46 (45%), Positives = 29/46 (63%)
 Frame = -1

Query: 148 IDEGNCSRMHDYFRDMGKEIICKEYVK*FEMRS*LFLDKQVLDVLT 11
           I + N   MHD  RDMG+EI+ + + K  E  + LFL ++VL VLT
Sbjct: 484 IGDKNRLMMHDLLRDMGREIVHENFPKCPERHTRLFLHEEVLSVLT 529


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