BLASTX nr result

ID: Panax25_contig00029168 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00029168
         (556 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_012461429.1 PREDICTED: heterogeneous nuclear ribonucleoprotei...    84   9e-16
XP_012461424.1 PREDICTED: heterogeneous nuclear ribonucleoprotei...    84   9e-16
CBI26733.3 unnamed protein product, partial [Vitis vinifera]           83   1e-15
XP_017980061.1 PREDICTED: heterogeneous nuclear ribonucleoprotei...    84   1e-15
XP_017980060.1 PREDICTED: heterogeneous nuclear ribonucleoprotei...    84   1e-15
EOY12155.1 RNA-binding family protein isoform 6 [Theobroma cacao]      84   1e-15
KHG28808.1 RNA-binding Musashi [Gossypium arboreum]                    84   1e-15
OMO83690.1 hypothetical protein CCACVL1_11276 [Corchorus capsula...    84   1e-15
XP_019196903.1 PREDICTED: heterogeneous nuclear ribonucleoprotei...    83   2e-15
CDP13750.1 unnamed protein product [Coffea canephora]                  83   3e-15
XP_002274589.1 PREDICTED: heterogeneous nuclear ribonucleoprotei...    83   3e-15
CAN75218.1 hypothetical protein VITISV_003519 [Vitis vinifera]         83   3e-15
KMT02058.1 hypothetical protein BVRB_9g207870 [Beta vulgaris sub...    76   4e-15
XP_010270159.1 PREDICTED: heterogeneous nuclear ribonucleoprotei...    82   8e-15
XP_010689542.1 PREDICTED: heterogeneous nuclear ribonucleoprotei...    76   8e-15
XP_002862696.1 predicted protein [Arabidopsis lyrata subsp. lyra...    75   9e-15
XP_015056265.1 PREDICTED: heterogeneous nuclear ribonucleoprotei...    81   1e-14
XP_004248330.1 PREDICTED: heterogeneous nuclear ribonucleoprotei...    81   1e-14
XP_006352533.1 PREDICTED: heterogeneous nuclear ribonucleoprotei...    81   1e-14
XP_016545279.1 PREDICTED: heterogeneous nuclear ribonucleoprotei...    81   1e-14

>XP_012461429.1 PREDICTED: heterogeneous nuclear ribonucleoprotein 1 isoform X2
           [Gossypium raimondii]
          Length = 483

 Score = 84.3 bits (207), Expect = 9e-16
 Identities = 38/44 (86%), Positives = 42/44 (95%)
 Frame = +3

Query: 423 LDKMESDLGKLFVGGISWDTDEDRLSEYFRAYGEVVEAVIMRDR 554
           +DKMESDLGKLF+GGISWDTDE+RL EYFR YGEVVEA+IMRDR
Sbjct: 5   VDKMESDLGKLFIGGISWDTDEERLKEYFRKYGEVVEAMIMRDR 48


>XP_012461424.1 PREDICTED: heterogeneous nuclear ribonucleoprotein 1 isoform X1
           [Gossypium raimondii]
          Length = 487

 Score = 84.3 bits (207), Expect = 9e-16
 Identities = 38/44 (86%), Positives = 42/44 (95%)
 Frame = +3

Query: 423 LDKMESDLGKLFVGGISWDTDEDRLSEYFRAYGEVVEAVIMRDR 554
           +DKMESDLGKLF+GGISWDTDE+RL EYFR YGEVVEA+IMRDR
Sbjct: 5   VDKMESDLGKLFIGGISWDTDEERLKEYFRKYGEVVEAMIMRDR 48


>CBI26733.3 unnamed protein product, partial [Vitis vinifera]
          Length = 309

 Score = 82.8 bits (203), Expect = 1e-15
 Identities = 38/41 (92%), Positives = 39/41 (95%)
 Frame = +3

Query: 432 MESDLGKLFVGGISWDTDEDRLSEYFRAYGEVVEAVIMRDR 554
           MESDLGKLF+GGISWDTDEDRL EYFR YGEVVEAVIMRDR
Sbjct: 1   MESDLGKLFIGGISWDTDEDRLKEYFRTYGEVVEAVIMRDR 41


>XP_017980061.1 PREDICTED: heterogeneous nuclear ribonucleoprotein 1 isoform X2
           [Theobroma cacao]
          Length = 479

 Score = 84.0 bits (206), Expect = 1e-15
 Identities = 38/43 (88%), Positives = 41/43 (95%)
 Frame = +3

Query: 426 DKMESDLGKLFVGGISWDTDEDRLSEYFRAYGEVVEAVIMRDR 554
           DKMESDLGKLF+GGISWDTDE+RL EYFR YGEVVEA+IMRDR
Sbjct: 6   DKMESDLGKLFIGGISWDTDEERLKEYFRKYGEVVEAMIMRDR 48


>XP_017980060.1 PREDICTED: heterogeneous nuclear ribonucleoprotein 1 isoform X1
           [Theobroma cacao]
          Length = 481

 Score = 84.0 bits (206), Expect = 1e-15
 Identities = 38/43 (88%), Positives = 41/43 (95%)
 Frame = +3

Query: 426 DKMESDLGKLFVGGISWDTDEDRLSEYFRAYGEVVEAVIMRDR 554
           DKMESDLGKLF+GGISWDTDE+RL EYFR YGEVVEA+IMRDR
Sbjct: 6   DKMESDLGKLFIGGISWDTDEERLKEYFRKYGEVVEAMIMRDR 48


>EOY12155.1 RNA-binding family protein isoform 6 [Theobroma cacao]
          Length = 481

 Score = 84.0 bits (206), Expect = 1e-15
 Identities = 38/43 (88%), Positives = 41/43 (95%)
 Frame = +3

Query: 426 DKMESDLGKLFVGGISWDTDEDRLSEYFRAYGEVVEAVIMRDR 554
           DKMESDLGKLF+GGISWDTDE+RL EYFR YGEVVEA+IMRDR
Sbjct: 6   DKMESDLGKLFIGGISWDTDEERLKEYFRKYGEVVEAMIMRDR 48


>KHG28808.1 RNA-binding Musashi [Gossypium arboreum]
          Length = 513

 Score = 84.0 bits (206), Expect = 1e-15
 Identities = 38/43 (88%), Positives = 41/43 (95%)
 Frame = +3

Query: 426 DKMESDLGKLFVGGISWDTDEDRLSEYFRAYGEVVEAVIMRDR 554
           DKMESDLGKLF+GGISWDTDE+RL EYFR YGEVVEA+IMRDR
Sbjct: 36  DKMESDLGKLFIGGISWDTDEERLKEYFRKYGEVVEAMIMRDR 78


>OMO83690.1 hypothetical protein CCACVL1_11276 [Corchorus capsularis]
          Length = 957

 Score = 84.0 bits (206), Expect = 1e-15
 Identities = 38/43 (88%), Positives = 41/43 (95%)
 Frame = +3

Query: 426 DKMESDLGKLFVGGISWDTDEDRLSEYFRAYGEVVEAVIMRDR 554
           DKMESDLGKLF+GGISWDTDE+RL EYFR YGEVVEA+IMRDR
Sbjct: 470 DKMESDLGKLFIGGISWDTDEERLKEYFRKYGEVVEAMIMRDR 512


>XP_019196903.1 PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like [Ipomoea
           nil] XP_019196904.1 PREDICTED: heterogeneous nuclear
           ribonucleoprotein 1-like [Ipomoea nil] XP_019196905.1
           PREDICTED: heterogeneous nuclear ribonucleoprotein
           1-like [Ipomoea nil]
          Length = 475

 Score = 83.2 bits (204), Expect = 2e-15
 Identities = 38/41 (92%), Positives = 40/41 (97%)
 Frame = +3

Query: 432 MESDLGKLFVGGISWDTDEDRLSEYFRAYGEVVEAVIMRDR 554
           MESDLGKLF+GGISWDTDEDRL EYFR+YGEVVEAVIMRDR
Sbjct: 2   MESDLGKLFIGGISWDTDEDRLKEYFRSYGEVVEAVIMRDR 42


>CDP13750.1 unnamed protein product [Coffea canephora]
          Length = 475

 Score = 82.8 bits (203), Expect = 3e-15
 Identities = 38/41 (92%), Positives = 40/41 (97%)
 Frame = +3

Query: 432 MESDLGKLFVGGISWDTDEDRLSEYFRAYGEVVEAVIMRDR 554
           MESDLGKLF+GGISWDTDEDRL EYFRA+GEVVEAVIMRDR
Sbjct: 1   MESDLGKLFIGGISWDTDEDRLKEYFRAFGEVVEAVIMRDR 41


>XP_002274589.1 PREDICTED: heterogeneous nuclear ribonucleoprotein 1 [Vitis
           vinifera]
          Length = 478

 Score = 82.8 bits (203), Expect = 3e-15
 Identities = 38/41 (92%), Positives = 39/41 (95%)
 Frame = +3

Query: 432 MESDLGKLFVGGISWDTDEDRLSEYFRAYGEVVEAVIMRDR 554
           MESDLGKLF+GGISWDTDEDRL EYFR YGEVVEAVIMRDR
Sbjct: 1   MESDLGKLFIGGISWDTDEDRLKEYFRTYGEVVEAVIMRDR 41


>CAN75218.1 hypothetical protein VITISV_003519 [Vitis vinifera]
          Length = 482

 Score = 82.8 bits (203), Expect = 3e-15
 Identities = 38/41 (92%), Positives = 39/41 (95%)
 Frame = +3

Query: 432 MESDLGKLFVGGISWDTDEDRLSEYFRAYGEVVEAVIMRDR 554
           MESDLGKLF+GGISWDTDEDRL EYFR YGEVVEAVIMRDR
Sbjct: 1   MESDLGKLFIGGISWDTDEDRLKEYFRTYGEVVEAVIMRDR 41


>KMT02058.1 hypothetical protein BVRB_9g207870 [Beta vulgaris subsp. vulgaris]
          Length = 74

 Score = 75.9 bits (185), Expect = 4e-15
 Identities = 35/41 (85%), Positives = 37/41 (90%)
 Frame = +3

Query: 432 MESDLGKLFVGGISWDTDEDRLSEYFRAYGEVVEAVIMRDR 554
           MESDLGKLF+GGISWDTDE RL E+F  YGEVVEAVIMRDR
Sbjct: 1   MESDLGKLFIGGISWDTDESRLKEFFGQYGEVVEAVIMRDR 41


>XP_010270159.1 PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like isoform
           X1 [Nelumbo nucifera]
          Length = 484

 Score = 81.6 bits (200), Expect = 8e-15
 Identities = 36/43 (83%), Positives = 42/43 (97%)
 Frame = +3

Query: 426 DKMESDLGKLFVGGISWDTDEDRLSEYFRAYGEVVEAVIMRDR 554
           +KMESDLGKLF+GGISWDT+EDRL EYF++YGEVVEAVIM+DR
Sbjct: 3   EKMESDLGKLFIGGISWDTNEDRLKEYFKSYGEVVEAVIMKDR 45


>XP_010689542.1 PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like isoform
           X2 [Beta vulgaris subsp. vulgaris]
          Length = 98

 Score = 75.9 bits (185), Expect = 8e-15
 Identities = 35/41 (85%), Positives = 37/41 (90%)
 Frame = +3

Query: 432 MESDLGKLFVGGISWDTDEDRLSEYFRAYGEVVEAVIMRDR 554
           MESDLGKLF+GGISWDTDE RL E+F  YGEVVEAVIMRDR
Sbjct: 1   MESDLGKLFIGGISWDTDESRLKEFFGQYGEVVEAVIMRDR 41


>XP_002862696.1 predicted protein [Arabidopsis lyrata subsp. lyrata] EFH38954.1
           predicted protein, partial [Arabidopsis lyrata subsp.
           lyrata]
          Length = 87

 Score = 75.5 bits (184), Expect = 9e-15
 Identities = 34/41 (82%), Positives = 38/41 (92%)
 Frame = +3

Query: 432 MESDLGKLFVGGISWDTDEDRLSEYFRAYGEVVEAVIMRDR 554
           MESDLGKLF+GGISWDTDE+RL +YF  YG+VVEAVIMRDR
Sbjct: 1   MESDLGKLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDR 41


>XP_015056265.1 PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like [Solanum
           pennellii]
          Length = 471

 Score = 81.3 bits (199), Expect = 1e-14
 Identities = 38/41 (92%), Positives = 39/41 (95%)
 Frame = +3

Query: 432 MESDLGKLFVGGISWDTDEDRLSEYFRAYGEVVEAVIMRDR 554
           MESDLGKLFVGGISWDTDEDRL EYF +YGEVVEAVIMRDR
Sbjct: 2   MESDLGKLFVGGISWDTDEDRLKEYFSSYGEVVEAVIMRDR 42


>XP_004248330.1 PREDICTED: heterogeneous nuclear ribonucleoprotein 1 [Solanum
           lycopersicum]
          Length = 471

 Score = 81.3 bits (199), Expect = 1e-14
 Identities = 38/41 (92%), Positives = 39/41 (95%)
 Frame = +3

Query: 432 MESDLGKLFVGGISWDTDEDRLSEYFRAYGEVVEAVIMRDR 554
           MESDLGKLFVGGISWDTDEDRL EYF +YGEVVEAVIMRDR
Sbjct: 2   MESDLGKLFVGGISWDTDEDRLKEYFSSYGEVVEAVIMRDR 42


>XP_006352533.1 PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like [Solanum
           tuberosum]
          Length = 471

 Score = 80.9 bits (198), Expect = 1e-14
 Identities = 37/41 (90%), Positives = 39/41 (95%)
 Frame = +3

Query: 432 MESDLGKLFVGGISWDTDEDRLSEYFRAYGEVVEAVIMRDR 554
           MESDLGKLF+GGISWDTDEDRL EYF +YGEVVEAVIMRDR
Sbjct: 2   MESDLGKLFIGGISWDTDEDRLKEYFSSYGEVVEAVIMRDR 42


>XP_016545279.1 PREDICTED: heterogeneous nuclear ribonucleoprotein 1 isoform X1
           [Capsicum annuum]
          Length = 477

 Score = 80.9 bits (198), Expect = 1e-14
 Identities = 37/43 (86%), Positives = 40/43 (93%)
 Frame = +3

Query: 426 DKMESDLGKLFVGGISWDTDEDRLSEYFRAYGEVVEAVIMRDR 554
           + MESDLGKLF+GGISWDTDEDRL EYF +YGEVVEAVIMRDR
Sbjct: 3   EMMESDLGKLFIGGISWDTDEDRLKEYFGSYGEVVEAVIMRDR 45


Top