BLASTX nr result

ID: Panax25_contig00028431 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00028431
         (973 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_018816225.1 PREDICTED: polyadenylation and cleavage factor ho...   129   5e-32
CBI23183.3 unnamed protein product, partial [Vitis vinifera]          135   8e-32
XP_019078215.1 PREDICTED: polyadenylation and cleavage factor ho...   135   8e-32
XP_010655357.1 PREDICTED: polyadenylation and cleavage factor ho...   135   9e-32
XP_018857118.1 PREDICTED: polyadenylation and cleavage factor ho...   127   2e-31
XP_008224793.1 PREDICTED: LOW QUALITY PROTEIN: polyadenylation a...   134   3e-31
ONI10047.1 hypothetical protein PRUPE_4G024700 [Prunus persica]       134   3e-31
XP_007213705.1 hypothetical protein PRUPE_ppa000684mg [Prunus pe...   133   7e-31
XP_011037705.1 PREDICTED: polyadenylation and cleavage factor ho...   132   1e-30
XP_011037702.1 PREDICTED: polyadenylation and cleavage factor ho...   132   1e-30
XP_016492698.1 PREDICTED: polyadenylation and cleavage factor ho...   132   2e-30
XP_019257117.1 PREDICTED: polyadenylation and cleavage factor ho...   132   2e-30
XP_009793882.1 PREDICTED: uncharacterized protein LOC104240702 [...   132   2e-30
XP_009601448.1 PREDICTED: polyadenylation and cleavage factor ho...   131   2e-30
XP_009601447.1 PREDICTED: polyadenylation and cleavage factor ho...   131   2e-30
XP_016432499.1 PREDICTED: LOW QUALITY PROTEIN: polyadenylation a...   131   2e-30
XP_009601446.1 PREDICTED: polyadenylation and cleavage factor ho...   131   2e-30
XP_011037706.1 PREDICTED: polyadenylation and cleavage factor ho...   130   4e-30
XP_010101465.1 hypothetical protein L484_012890 [Morus notabilis...   130   6e-30
XP_002304927.2 pre-mRNA cleavage complex-related family protein ...   130   7e-30

>XP_018816225.1 PREDICTED: polyadenylation and cleavage factor homolog 4-like
           [Juglans regia]
          Length = 245

 Score =  129 bits (323), Expect = 5e-32
 Identities = 61/92 (66%), Positives = 72/92 (78%)
 Frame = -1

Query: 973 KVFCEAYMQVNPSLRPSMCHLFGTWSTVFPPSVLRKIEAQLKFSPAVDRQSSGSTPLRAS 794
           +VFCEAY QV P    +M HLFGTWS VFPPSVLRKIEA+L+FSP+ + QSSG TP RAS
Sbjct: 147 EVFCEAYRQVQPDQHNAMRHLFGTWSAVFPPSVLRKIEAKLQFSPSANHQSSGLTPSRAS 206

Query: 793 ESPRPMHGIHVNPKYLEARRQFDHTTAENISF 698
           ESPRP HGIHVNPKYL   RQ +H+T + + +
Sbjct: 207 ESPRPTHGIHVNPKYL---RQLEHSTVDGVCY 235


>CBI23183.3 unnamed protein product, partial [Vitis vinifera]
          Length = 1003

 Score =  135 bits (341), Expect = 8e-32
 Identities = 63/89 (70%), Positives = 74/89 (83%)
 Frame = -1

Query: 973 KVFCEAYMQVNPSLRPSMCHLFGTWSTVFPPSVLRKIEAQLKFSPAVDRQSSGSTPLRAS 794
           +VFCEAY QV+P+L  +M HLFGTWS VFPPSVLRKIEAQL+FSP ++ QSSG   LRAS
Sbjct: 199 EVFCEAYRQVHPNLYTAMRHLFGTWSAVFPPSVLRKIEAQLQFSPTLNNQSSGMASLRAS 258

Query: 793 ESPRPMHGIHVNPKYLEARRQFDHTTAEN 707
           ESPRP H IHVNPKYLEAR QF+H+  ++
Sbjct: 259 ESPRPTHSIHVNPKYLEARHQFEHSPVDS 287


>XP_019078215.1 PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X2
           [Vitis vinifera]
          Length = 1033

 Score =  135 bits (341), Expect = 8e-32
 Identities = 63/89 (70%), Positives = 74/89 (83%)
 Frame = -1

Query: 973 KVFCEAYMQVNPSLRPSMCHLFGTWSTVFPPSVLRKIEAQLKFSPAVDRQSSGSTPLRAS 794
           +VFCEAY QV+P+L  +M HLFGTWS VFPPSVLRKIEAQL+FSP ++ QSSG   LRAS
Sbjct: 159 EVFCEAYRQVHPNLYTAMRHLFGTWSAVFPPSVLRKIEAQLQFSPTLNNQSSGMASLRAS 218

Query: 793 ESPRPMHGIHVNPKYLEARRQFDHTTAEN 707
           ESPRP H IHVNPKYLEAR QF+H+  ++
Sbjct: 219 ESPRPTHSIHVNPKYLEARHQFEHSPVDS 247


>XP_010655357.1 PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X1
           [Vitis vinifera]
          Length = 1046

 Score =  135 bits (341), Expect = 9e-32
 Identities = 63/89 (70%), Positives = 74/89 (83%)
 Frame = -1

Query: 973 KVFCEAYMQVNPSLRPSMCHLFGTWSTVFPPSVLRKIEAQLKFSPAVDRQSSGSTPLRAS 794
           +VFCEAY QV+P+L  +M HLFGTWS VFPPSVLRKIEAQL+FSP ++ QSSG   LRAS
Sbjct: 159 EVFCEAYRQVHPNLYTAMRHLFGTWSAVFPPSVLRKIEAQLQFSPTLNNQSSGMASLRAS 218

Query: 793 ESPRPMHGIHVNPKYLEARRQFDHTTAEN 707
           ESPRP H IHVNPKYLEAR QF+H+  ++
Sbjct: 219 ESPRPTHSIHVNPKYLEARHQFEHSPVDS 247


>XP_018857118.1 PREDICTED: polyadenylation and cleavage factor homolog 4-like,
           partial [Juglans regia]
          Length = 232

 Score =  127 bits (318), Expect = 2e-31
 Identities = 61/88 (69%), Positives = 70/88 (79%)
 Frame = -1

Query: 973 KVFCEAYMQVNPSLRPSMCHLFGTWSTVFPPSVLRKIEAQLKFSPAVDRQSSGSTPLRAS 794
           +VFCEAY QV P    +M HLFGTWS VFPPSVLRKIEA+L+FSP+ + QSSG TP RAS
Sbjct: 147 EVFCEAYRQVQPDQHNAMRHLFGTWSAVFPPSVLRKIEAKLQFSPSANHQSSGLTPSRAS 206

Query: 793 ESPRPMHGIHVNPKYLEARRQFDHTTAE 710
           ESPRP HGIHVNPKYL   RQ +H+T +
Sbjct: 207 ESPRPTHGIHVNPKYL---RQLEHSTVD 231


>XP_008224793.1 PREDICTED: LOW QUALITY PROTEIN: polyadenylation and cleavage factor
           homolog 4 [Prunus mume]
          Length = 1002

 Score =  134 bits (337), Expect = 3e-31
 Identities = 64/90 (71%), Positives = 75/90 (83%)
 Frame = -1

Query: 973 KVFCEAYMQVNPSLRPSMCHLFGTWSTVFPPSVLRKIEAQLKFSPAVDRQSSGSTPLRAS 794
           +VFCEAY QVNP+  P+M HLFGTWS VFPPSVLR+IE QL+FSP V++QSSGSTPLRAS
Sbjct: 162 EVFCEAYRQVNPNQYPAMRHLFGTWSAVFPPSVLRRIEEQLQFSPQVNQQSSGSTPLRAS 221

Query: 793 ESPRPMHGIHVNPKYLEARRQFDHTTAENI 704
           ESPRP HGIHVNPKYL   RQ D +  +++
Sbjct: 222 ESPRPTHGIHVNPKYL---RQLDSSNVDSV 248


>ONI10047.1 hypothetical protein PRUPE_4G024700 [Prunus persica]
          Length = 1017

 Score =  134 bits (337), Expect = 3e-31
 Identities = 64/90 (71%), Positives = 75/90 (83%)
 Frame = -1

Query: 973 KVFCEAYMQVNPSLRPSMCHLFGTWSTVFPPSVLRKIEAQLKFSPAVDRQSSGSTPLRAS 794
           +VFCEAY QVNP+  P+M HLFGTWS VFPPSVLR+IE QL+FSP V++QSSGSTPLRAS
Sbjct: 162 EVFCEAYRQVNPNQYPAMRHLFGTWSAVFPPSVLRRIEEQLQFSPLVNQQSSGSTPLRAS 221

Query: 793 ESPRPMHGIHVNPKYLEARRQFDHTTAENI 704
           ESPRP HGIHVNPKYL   RQ D +  +++
Sbjct: 222 ESPRPTHGIHVNPKYL---RQLDSSNVDSV 248


>XP_007213705.1 hypothetical protein PRUPE_ppa000684mg [Prunus persica]
          Length = 1037

 Score =  133 bits (334), Expect = 7e-31
 Identities = 64/89 (71%), Positives = 74/89 (83%)
 Frame = -1

Query: 973 KVFCEAYMQVNPSLRPSMCHLFGTWSTVFPPSVLRKIEAQLKFSPAVDRQSSGSTPLRAS 794
           +VFCEAY QVNP+  P+M HLFGTWS VFPPSVLR+IE QL+FSP V++QSSGSTPLRAS
Sbjct: 162 EVFCEAYRQVNPNQYPAMRHLFGTWSAVFPPSVLRRIEEQLQFSPLVNQQSSGSTPLRAS 221

Query: 793 ESPRPMHGIHVNPKYLEARRQFDHTTAEN 707
           ESPRP HGIHVNPKYL   RQ D +  ++
Sbjct: 222 ESPRPTHGIHVNPKYL---RQLDSSNVDS 247


>XP_011037705.1 PREDICTED: polyadenylation and cleavage factor homolog 4-like
           isoform X4 [Populus euphratica]
          Length = 1051

 Score =  132 bits (332), Expect = 1e-30
 Identities = 66/93 (70%), Positives = 73/93 (78%)
 Frame = -1

Query: 973 KVFCEAYMQVNPSLRPSMCHLFGTWSTVFPPSVLRKIEAQLKFSPAVDRQSSGSTPLRAS 794
           +VFCEAY QV+PSL PSM HLFGTWS+VFP SVL KIE QL FSP V+ QSS  T  RAS
Sbjct: 151 EVFCEAYRQVDPSLYPSMRHLFGTWSSVFPSSVLHKIETQLDFSPQVNNQSSSLTSFRAS 210

Query: 793 ESPRPMHGIHVNPKYLEARRQFDHTTAENISFS 695
           ESPRP HGIHVNPKYL   RQ DH+TA+N  +S
Sbjct: 211 ESPRPPHGIHVNPKYL---RQLDHSTADNTGWS 240


>XP_011037702.1 PREDICTED: polyadenylation and cleavage factor homolog 4-like
           isoform X1 [Populus euphratica] XP_011037703.1
           PREDICTED: polyadenylation and cleavage factor homolog
           4-like isoform X2 [Populus euphratica] XP_011037704.1
           PREDICTED: polyadenylation and cleavage factor homolog
           4-like isoform X3 [Populus euphratica]
          Length = 1053

 Score =  132 bits (332), Expect = 1e-30
 Identities = 66/93 (70%), Positives = 73/93 (78%)
 Frame = -1

Query: 973 KVFCEAYMQVNPSLRPSMCHLFGTWSTVFPPSVLRKIEAQLKFSPAVDRQSSGSTPLRAS 794
           +VFCEAY QV+PSL PSM HLFGTWS+VFP SVL KIE QL FSP V+ QSS  T  RAS
Sbjct: 151 EVFCEAYRQVDPSLYPSMRHLFGTWSSVFPSSVLHKIETQLDFSPQVNNQSSSLTSFRAS 210

Query: 793 ESPRPMHGIHVNPKYLEARRQFDHTTAENISFS 695
           ESPRP HGIHVNPKYL   RQ DH+TA+N  +S
Sbjct: 211 ESPRPPHGIHVNPKYL---RQLDHSTADNTGWS 240


>XP_016492698.1 PREDICTED: polyadenylation and cleavage factor homolog 4-like
           [Nicotiana tabacum]
          Length = 900

 Score =  132 bits (331), Expect = 2e-30
 Identities = 62/90 (68%), Positives = 74/90 (82%)
 Frame = -1

Query: 973 KVFCEAYMQVNPSLRPSMCHLFGTWSTVFPPSVLRKIEAQLKFSPAVDRQSSGSTPLRAS 794
           +VFCEAY QV+PS+ P+M HLFGTWSTVFP  VLRKIE +L+FS +  +QSSG T  RAS
Sbjct: 150 EVFCEAYRQVHPSMHPAMRHLFGTWSTVFPAPVLRKIETRLQFSQSGAQQSSGLTSSRAS 209

Query: 793 ESPRPMHGIHVNPKYLEARRQFDHTTAENI 704
           ESPRP HGIHVNPKYLEARRQ  H+T +++
Sbjct: 210 ESPRPTHGIHVNPKYLEARRQLGHSTIDSV 239


>XP_019257117.1 PREDICTED: polyadenylation and cleavage factor homolog 4 [Nicotiana
           attenuata] OIS96062.1 polyadenylation and cleavage
           factor -like 4 [Nicotiana attenuata]
          Length = 982

 Score =  132 bits (331), Expect = 2e-30
 Identities = 62/90 (68%), Positives = 74/90 (82%)
 Frame = -1

Query: 973 KVFCEAYMQVNPSLRPSMCHLFGTWSTVFPPSVLRKIEAQLKFSPAVDRQSSGSTPLRAS 794
           +VFCEAY QV+PS+ P+M HLFGTWSTVFP  VLRKIE +L+FS +  +QSSG T  RAS
Sbjct: 150 EVFCEAYRQVHPSMHPAMRHLFGTWSTVFPAPVLRKIETRLQFSQSGAQQSSGLTSSRAS 209

Query: 793 ESPRPMHGIHVNPKYLEARRQFDHTTAENI 704
           ESPRP HGIHVNPKYLEARRQ  H+T +++
Sbjct: 210 ESPRPTHGIHVNPKYLEARRQLGHSTIDSV 239


>XP_009793882.1 PREDICTED: uncharacterized protein LOC104240702 [Nicotiana
           sylvestris]
          Length = 982

 Score =  132 bits (331), Expect = 2e-30
 Identities = 62/90 (68%), Positives = 74/90 (82%)
 Frame = -1

Query: 973 KVFCEAYMQVNPSLRPSMCHLFGTWSTVFPPSVLRKIEAQLKFSPAVDRQSSGSTPLRAS 794
           +VFCEAY QV+PS+ P+M HLFGTWSTVFP  VLRKIE +L+FS +  +QSSG T  RAS
Sbjct: 150 EVFCEAYRQVHPSMHPAMRHLFGTWSTVFPAPVLRKIETRLQFSQSGAQQSSGLTSSRAS 209

Query: 793 ESPRPMHGIHVNPKYLEARRQFDHTTAENI 704
           ESPRP HGIHVNPKYLEARRQ  H+T +++
Sbjct: 210 ESPRPTHGIHVNPKYLEARRQLGHSTIDSV 239


>XP_009601448.1 PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X3
           [Nicotiana tomentosiformis]
          Length = 980

 Score =  131 bits (330), Expect = 2e-30
 Identities = 62/90 (68%), Positives = 73/90 (81%)
 Frame = -1

Query: 973 KVFCEAYMQVNPSLRPSMCHLFGTWSTVFPPSVLRKIEAQLKFSPAVDRQSSGSTPLRAS 794
           +VFCEAY QV+PS+ P+M HLFGTWSTVFP  VLRKIE +L+FS    +QSSG T  RAS
Sbjct: 150 EVFCEAYRQVHPSMHPAMRHLFGTWSTVFPAPVLRKIETRLQFSQPGPQQSSGLTSSRAS 209

Query: 793 ESPRPMHGIHVNPKYLEARRQFDHTTAENI 704
           ESPRP HGIHVNPKYLEARRQ  H+T +++
Sbjct: 210 ESPRPTHGIHVNPKYLEARRQLGHSTIDSV 239


>XP_009601447.1 PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X2
           [Nicotiana tomentosiformis]
          Length = 985

 Score =  131 bits (330), Expect = 2e-30
 Identities = 62/90 (68%), Positives = 73/90 (81%)
 Frame = -1

Query: 973 KVFCEAYMQVNPSLRPSMCHLFGTWSTVFPPSVLRKIEAQLKFSPAVDRQSSGSTPLRAS 794
           +VFCEAY QV+PS+ P+M HLFGTWSTVFP  VLRKIE +L+FS    +QSSG T  RAS
Sbjct: 150 EVFCEAYRQVHPSMHPAMRHLFGTWSTVFPAPVLRKIETRLQFSQPGPQQSSGLTSSRAS 209

Query: 793 ESPRPMHGIHVNPKYLEARRQFDHTTAENI 704
           ESPRP HGIHVNPKYLEARRQ  H+T +++
Sbjct: 210 ESPRPTHGIHVNPKYLEARRQLGHSTIDSV 239


>XP_016432499.1 PREDICTED: LOW QUALITY PROTEIN: polyadenylation and cleavage factor
           homolog 4-like [Nicotiana tabacum]
          Length = 986

 Score =  131 bits (330), Expect = 2e-30
 Identities = 62/90 (68%), Positives = 73/90 (81%)
 Frame = -1

Query: 973 KVFCEAYMQVNPSLRPSMCHLFGTWSTVFPPSVLRKIEAQLKFSPAVDRQSSGSTPLRAS 794
           +VFCEAY QV+PS+ P+M HLFGTWSTVFP  VLRKIE +L+FS    +QSSG T  RAS
Sbjct: 150 EVFCEAYRQVHPSMHPAMRHLFGTWSTVFPAPVLRKIETRLQFSQPGPQQSSGLTSSRAS 209

Query: 793 ESPRPMHGIHVNPKYLEARRQFDHTTAENI 704
           ESPRP HGIHVNPKYLEARRQ  H+T +++
Sbjct: 210 ESPRPTHGIHVNPKYLEARRQLGHSTIDSV 239


>XP_009601446.1 PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X1
           [Nicotiana tomentosiformis]
          Length = 989

 Score =  131 bits (330), Expect = 2e-30
 Identities = 62/90 (68%), Positives = 73/90 (81%)
 Frame = -1

Query: 973 KVFCEAYMQVNPSLRPSMCHLFGTWSTVFPPSVLRKIEAQLKFSPAVDRQSSGSTPLRAS 794
           +VFCEAY QV+PS+ P+M HLFGTWSTVFP  VLRKIE +L+FS    +QSSG T  RAS
Sbjct: 150 EVFCEAYRQVHPSMHPAMRHLFGTWSTVFPAPVLRKIETRLQFSQPGPQQSSGLTSSRAS 209

Query: 793 ESPRPMHGIHVNPKYLEARRQFDHTTAENI 704
           ESPRP HGIHVNPKYLEARRQ  H+T +++
Sbjct: 210 ESPRPTHGIHVNPKYLEARRQLGHSTIDSV 239


>XP_011037706.1 PREDICTED: polyadenylation and cleavage factor homolog 4-like
           isoform X5 [Populus euphratica]
          Length = 1035

 Score =  130 bits (328), Expect = 4e-30
 Identities = 65/89 (73%), Positives = 71/89 (79%)
 Frame = -1

Query: 973 KVFCEAYMQVNPSLRPSMCHLFGTWSTVFPPSVLRKIEAQLKFSPAVDRQSSGSTPLRAS 794
           +VFCEAY QV+PSL PSM HLFGTWS+VFP SVL KIE QL FSP V+ QSS  T  RAS
Sbjct: 151 EVFCEAYRQVDPSLYPSMRHLFGTWSSVFPSSVLHKIETQLDFSPQVNNQSSSLTSFRAS 210

Query: 793 ESPRPMHGIHVNPKYLEARRQFDHTTAEN 707
           ESPRP HGIHVNPKYL   RQ DH+TA+N
Sbjct: 211 ESPRPPHGIHVNPKYL---RQLDHSTADN 236


>XP_010101465.1 hypothetical protein L484_012890 [Morus notabilis] EXB88448.1
           hypothetical protein L484_012890 [Morus notabilis]
          Length = 1022

 Score =  130 bits (327), Expect = 6e-30
 Identities = 63/90 (70%), Positives = 73/90 (81%)
 Frame = -1

Query: 973 KVFCEAYMQVNPSLRPSMCHLFGTWSTVFPPSVLRKIEAQLKFSPAVDRQSSGSTPLRAS 794
           +VFCEAY QV PS  P+M HLFGTWSTVFPPSVL KIEAQL+FSP+  +QSS   PLRAS
Sbjct: 152 EVFCEAYRQVPPSQHPAMRHLFGTWSTVFPPSVLHKIEAQLQFSPSASQQSSRLPPLRAS 211

Query: 793 ESPRPMHGIHVNPKYLEARRQFDHTTAENI 704
           ESPRP HGIHVNPKYL   RQ +H+ A+++
Sbjct: 212 ESPRPAHGIHVNPKYL---RQIEHSAADSL 238


>XP_002304927.2 pre-mRNA cleavage complex-related family protein [Populus
           trichocarpa] EEE85438.2 pre-mRNA cleavage
           complex-related family protein [Populus trichocarpa]
          Length = 841

 Score =  130 bits (326), Expect = 7e-30
 Identities = 65/89 (73%), Positives = 71/89 (79%)
 Frame = -1

Query: 973 KVFCEAYMQVNPSLRPSMCHLFGTWSTVFPPSVLRKIEAQLKFSPAVDRQSSGSTPLRAS 794
           +VFCEAY QV+PSL PSM HLFGTWS+VFP SVL KIE QL FSP V+ QSS  T  RAS
Sbjct: 151 EVFCEAYRQVDPSLYPSMRHLFGTWSSVFPSSVLHKIETQLHFSPQVNDQSSSLTSFRAS 210

Query: 793 ESPRPMHGIHVNPKYLEARRQFDHTTAEN 707
           ESPRP HGIHVNPKYL   RQ DH+TA+N
Sbjct: 211 ESPRPPHGIHVNPKYL---RQLDHSTADN 236


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