BLASTX nr result
ID: Panax25_contig00028269
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax25_contig00028269
(371 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_017234181.1 PREDICTED: 30S ribosomal protein S13, chloroplast... 168 4e-51
KVI04771.1 Ribosomal protein S13 [Cynara cardunculus var. scolymus] 160 3e-48
XP_002285833.1 PREDICTED: 30S ribosomal protein S13, chloroplast... 153 2e-45
XP_002302256.1 hypothetical protein POPTR_0002s08900g [Populus t... 150 3e-44
XP_009605327.1 PREDICTED: 30S ribosomal protein S13, chloroplast... 149 5e-44
XP_019180048.1 PREDICTED: 30S ribosomal protein S13, chloroplast... 149 2e-43
XP_016493236.1 PREDICTED: 30S ribosomal protein S13, chloroplast... 149 2e-43
XP_009795656.1 PREDICTED: 30S ribosomal protein S13, chloroplast... 147 5e-43
XP_010063338.2 PREDICTED: 30S ribosomal protein S13, chloroplast... 148 1e-42
XP_019257041.1 PREDICTED: 30S ribosomal protein S13, chloroplast... 146 1e-42
XP_016505622.1 PREDICTED: 30S ribosomal protein S13, chloroplast... 145 4e-42
KCW70554.1 hypothetical protein EUGRSUZ_F03746 [Eucalyptus grandis] 148 7e-42
KCW70553.1 hypothetical protein EUGRSUZ_F03746 [Eucalyptus grandis] 148 7e-42
XP_006355960.1 PREDICTED: 30S ribosomal protein S13, chloroplast... 144 1e-41
XP_007018955.1 PREDICTED: 30S ribosomal protein S13, chloroplast... 144 1e-41
XP_011001411.1 PREDICTED: 30S ribosomal protein S13, chloroplast... 144 2e-41
XP_002306609.2 hypothetical protein POPTR_0005s16160g [Populus t... 143 2e-41
ADR30788.1 chloroplast 30S ribosomal protein S13 [Hevea brasilie... 143 2e-41
XP_006434117.1 hypothetical protein CICLE_v10002692mg [Citrus cl... 142 3e-41
CDP19788.1 unnamed protein product [Coffea canephora] 143 3e-41
>XP_017234181.1 PREDICTED: 30S ribosomal protein S13, chloroplastic [Daucus carota
subsp. sativus] KZN10160.1 hypothetical protein
DCAR_002816 [Daucus carota subsp. sativus]
Length = 169
Score = 168 bits (425), Expect = 4e-51
Identities = 86/105 (81%), Positives = 93/105 (88%)
Frame = +1
Query: 55 MAQAVATPVIPSFSLICNTSITKTHHSNSISFPISTPTKFGGLSIKCARVGGVEIPNAKR 234
MAQA+ATP+ S SLI NTS+ K+ S+S+PIST K GGLSI+CARVGGVEIPNAKR
Sbjct: 1 MAQAMATPLTSSLSLISNTSLFKSSKPTSLSYPISTQPKIGGLSIRCARVGGVEIPNAKR 60
Query: 235 VQYSLQYIHGIGRTRALQILNDLKMENKITKDLSEEELITLRDEV 369
VQYSLQYIHGIGRTRALQILNDLKMENKITKDLSEEELITLRDEV
Sbjct: 61 VQYSLQYIHGIGRTRALQILNDLKMENKITKDLSEEELITLRDEV 105
>KVI04771.1 Ribosomal protein S13 [Cynara cardunculus var. scolymus]
Length = 169
Score = 160 bits (406), Expect = 3e-48
Identities = 83/105 (79%), Positives = 88/105 (83%)
Frame = +1
Query: 55 MAQAVATPVIPSFSLICNTSITKTHHSNSISFPISTPTKFGGLSIKCARVGGVEIPNAKR 234
MAQA+ATPV PS SLIC TS + S+SF P K GGLSI+CARVGGVEIPN KR
Sbjct: 1 MAQALATPVAPSLSLICTTSSSFKSSPTSLSFSTFNPPKVGGLSIRCARVGGVEIPNNKR 60
Query: 235 VQYSLQYIHGIGRTRALQILNDLKMENKITKDLSEEELITLRDEV 369
VQYSLQYIHGIGRTRAL+ILNDLKMENKITKDLSEEELITLRDEV
Sbjct: 61 VQYSLQYIHGIGRTRALEILNDLKMENKITKDLSEEELITLRDEV 105
>XP_002285833.1 PREDICTED: 30S ribosomal protein S13, chloroplastic [Vitis
vinifera] CBI19076.3 unnamed protein product, partial
[Vitis vinifera]
Length = 167
Score = 153 bits (387), Expect = 2e-45
Identities = 80/105 (76%), Positives = 88/105 (83%)
Frame = +1
Query: 55 MAQAVATPVIPSFSLICNTSITKTHHSNSISFPISTPTKFGGLSIKCARVGGVEIPNAKR 234
MAQA+ATP+ PS SLICNT SN++SF P KFGGLSIKCARVGGVEIPN+KR
Sbjct: 1 MAQALATPLAPSLSLICNTR-NPLSPSNNLSFSTPAPPKFGGLSIKCARVGGVEIPNSKR 59
Query: 235 VQYSLQYIHGIGRTRALQILNDLKMENKITKDLSEEELITLRDEV 369
V+YSLQYIHGIGR+R+ QIL DL MENKITKDLSEEELITLRDEV
Sbjct: 60 VEYSLQYIHGIGRSRSKQILCDLGMENKITKDLSEEELITLRDEV 104
>XP_002302256.1 hypothetical protein POPTR_0002s08900g [Populus trichocarpa]
ABK95935.1 unknown [Populus trichocarpa] EEE81529.1
hypothetical protein POPTR_0002s08900g [Populus
trichocarpa]
Length = 168
Score = 150 bits (380), Expect = 3e-44
Identities = 78/105 (74%), Positives = 86/105 (81%)
Frame = +1
Query: 55 MAQAVATPVIPSFSLICNTSITKTHHSNSISFPISTPTKFGGLSIKCARVGGVEIPNAKR 234
MAQ +A PV+PS S ICN + T SNSIS PIS P K G LSI+CARVGGVEIPN+KR
Sbjct: 1 MAQTLAMPVVPSLSAICN-GLKSTSLSNSISLPISNPPKAGSLSIRCARVGGVEIPNSKR 59
Query: 235 VQYSLQYIHGIGRTRALQILNDLKMENKITKDLSEEELITLRDEV 369
V+YSLQYIHGIGR+ A QIL+DL MENKITKDLSEEELI LRDEV
Sbjct: 60 VEYSLQYIHGIGRSNARQILSDLSMENKITKDLSEEELIILRDEV 104
>XP_009605327.1 PREDICTED: 30S ribosomal protein S13, chloroplastic [Nicotiana
tomentosiformis]
Length = 130
Score = 149 bits (375), Expect = 5e-44
Identities = 78/105 (74%), Positives = 86/105 (81%)
Frame = +1
Query: 55 MAQAVATPVIPSFSLICNTSITKTHHSNSISFPISTPTKFGGLSIKCARVGGVEIPNAKR 234
MAQA+ATPV+PS SLICNTS H+S S S P S P K GGLSIKC RVGGVEIPN KR
Sbjct: 1 MAQALATPVLPSLSLICNTSAISKHNSLSFSTPTSFP-KIGGLSIKCVRVGGVEIPNNKR 59
Query: 235 VQYSLQYIHGIGRTRALQILNDLKMENKITKDLSEEELITLRDEV 369
V+++LQYIHGIGRT A QIL DL++ENKI KD SEEELITLRDEV
Sbjct: 60 VEFALQYIHGIGRTSARQILVDLQIENKIMKDFSEEELITLRDEV 104
>XP_019180048.1 PREDICTED: 30S ribosomal protein S13, chloroplastic-like [Ipomoea
nil]
Length = 168
Score = 149 bits (375), Expect = 2e-43
Identities = 74/105 (70%), Positives = 90/105 (85%)
Frame = +1
Query: 55 MAQAVATPVIPSFSLICNTSITKTHHSNSISFPISTPTKFGGLSIKCARVGGVEIPNAKR 234
MAQA+ATPV+PS S+I N ++ ++ S+SFPIST K GGLSIKC RVGGVEIPN KR
Sbjct: 1 MAQALATPVLPSLSIITN-ALPSSNRKTSLSFPISTSPKIGGLSIKCVRVGGVEIPNNKR 59
Query: 235 VQYSLQYIHGIGRTRALQILNDLKMENKITKDLSEEELITLRDEV 369
V+YSLQYIHG+GR+RA QIL+D+ M+NKITK+LS+EELITLRDEV
Sbjct: 60 VEYSLQYIHGVGRSRARQILSDIGMDNKITKELSQEELITLRDEV 104
>XP_016493236.1 PREDICTED: 30S ribosomal protein S13, chloroplastic-like [Nicotiana
tabacum]
Length = 168
Score = 149 bits (375), Expect = 2e-43
Identities = 78/105 (74%), Positives = 86/105 (81%)
Frame = +1
Query: 55 MAQAVATPVIPSFSLICNTSITKTHHSNSISFPISTPTKFGGLSIKCARVGGVEIPNAKR 234
MAQA+ATPV+PS SLICNTS H+S S S P S P K GGLSIKC RVGGVEIPN KR
Sbjct: 1 MAQALATPVLPSLSLICNTSAISKHNSLSFSTPTSFP-KIGGLSIKCVRVGGVEIPNNKR 59
Query: 235 VQYSLQYIHGIGRTRALQILNDLKMENKITKDLSEEELITLRDEV 369
V+++LQYIHGIGRT A QIL DL++ENKI KD SEEELITLRDEV
Sbjct: 60 VEFALQYIHGIGRTSARQILVDLQIENKIMKDFSEEELITLRDEV 104
>XP_009795656.1 PREDICTED: 30S ribosomal protein S13, chloroplastic [Nicotiana
sylvestris]
Length = 168
Score = 147 bits (372), Expect = 5e-43
Identities = 78/105 (74%), Positives = 85/105 (80%)
Frame = +1
Query: 55 MAQAVATPVIPSFSLICNTSITKTHHSNSISFPISTPTKFGGLSIKCARVGGVEIPNAKR 234
MAQA+ATPV+PS SLICNTS H+ S S P S P K GGLSIKC RVGGVEIPN KR
Sbjct: 1 MAQALATPVLPSLSLICNTSTISKHNFLSFSTPTSFP-KIGGLSIKCVRVGGVEIPNNKR 59
Query: 235 VQYSLQYIHGIGRTRALQILNDLKMENKITKDLSEEELITLRDEV 369
V++SLQYIHGIGRT A QIL DL++ENKI KD SEEELITLRDEV
Sbjct: 60 VEFSLQYIHGIGRTSARQILVDLQIENKIMKDFSEEELITLRDEV 104
>XP_010063338.2 PREDICTED: 30S ribosomal protein S13, chloroplastic [Eucalyptus
grandis]
Length = 203
Score = 148 bits (373), Expect = 1e-42
Identities = 78/109 (71%), Positives = 88/109 (80%), Gaps = 2/109 (1%)
Frame = +1
Query: 49 TSMAQAVATPVIPSFSLICNTSITKTHHS--NSISFPISTPTKFGGLSIKCARVGGVEIP 222
T+MAQA+ATPV PS SLICN S +++SFP++ P K GLSI+CARVGGVEIP
Sbjct: 31 TTMAQALATPVAPSLSLICNRGGGGGSASPFSALSFPVAAPPKLQGLSIRCARVGGVEIP 90
Query: 223 NAKRVQYSLQYIHGIGRTRALQILNDLKMENKITKDLSEEELITLRDEV 369
N KRV+YSLQYIHG+GRTRA QIL DL MENKITKDLSEEEL TLRDEV
Sbjct: 91 NNKRVEYSLQYIHGVGRTRARQILCDLAMENKITKDLSEEELTTLRDEV 139
>XP_019257041.1 PREDICTED: 30S ribosomal protein S13, chloroplastic [Nicotiana
attenuata] OIS95997.1 30s ribosomal protein s13,
chloroplastic [Nicotiana attenuata]
Length = 168
Score = 146 bits (369), Expect = 1e-42
Identities = 77/105 (73%), Positives = 86/105 (81%)
Frame = +1
Query: 55 MAQAVATPVIPSFSLICNTSITKTHHSNSISFPISTPTKFGGLSIKCARVGGVEIPNAKR 234
MAQA+ATPV+PS SLICNTS ++S S S P S P K GGLSIKC RVGGVEIPN KR
Sbjct: 1 MAQALATPVLPSLSLICNTSAISKYNSLSFSTPTSFP-KIGGLSIKCVRVGGVEIPNNKR 59
Query: 235 VQYSLQYIHGIGRTRALQILNDLKMENKITKDLSEEELITLRDEV 369
V+++LQYIHGIGRT A QIL DL++ENKI KD SEEELITLRDEV
Sbjct: 60 VEFALQYIHGIGRTSARQILVDLQIENKIMKDFSEEELITLRDEV 104
>XP_016505622.1 PREDICTED: 30S ribosomal protein S13, chloroplastic-like [Nicotiana
tabacum]
Length = 168
Score = 145 bits (366), Expect = 4e-42
Identities = 76/105 (72%), Positives = 84/105 (80%)
Frame = +1
Query: 55 MAQAVATPVIPSFSLICNTSITKTHHSNSISFPISTPTKFGGLSIKCARVGGVEIPNAKR 234
MAQA+ATPV+PS SLICNTS H+ S S P S P K GGLS+ C RVGGVEIPN KR
Sbjct: 1 MAQALATPVLPSLSLICNTSAISKHNFLSFSTPTSFP-KIGGLSVNCVRVGGVEIPNNKR 59
Query: 235 VQYSLQYIHGIGRTRALQILNDLKMENKITKDLSEEELITLRDEV 369
V++SLQYIHGIGRT A QIL DL++ENKI KD SEEELITLRDEV
Sbjct: 60 VEFSLQYIHGIGRTSARQILVDLQIENKIMKDFSEEELITLRDEV 104
>KCW70554.1 hypothetical protein EUGRSUZ_F03746 [Eucalyptus grandis]
Length = 274
Score = 148 bits (373), Expect = 7e-42
Identities = 78/109 (71%), Positives = 88/109 (80%), Gaps = 2/109 (1%)
Frame = +1
Query: 49 TSMAQAVATPVIPSFSLICNTSITKTHHS--NSISFPISTPTKFGGLSIKCARVGGVEIP 222
T+MAQA+ATPV PS SLICN S +++SFP++ P K GLSI+CARVGGVEIP
Sbjct: 102 TTMAQALATPVAPSLSLICNRGGGGGSASPFSALSFPVAAPPKLQGLSIRCARVGGVEIP 161
Query: 223 NAKRVQYSLQYIHGIGRTRALQILNDLKMENKITKDLSEEELITLRDEV 369
N KRV+YSLQYIHG+GRTRA QIL DL MENKITKDLSEEEL TLRDEV
Sbjct: 162 NNKRVEYSLQYIHGVGRTRARQILCDLAMENKITKDLSEEELTTLRDEV 210
>KCW70553.1 hypothetical protein EUGRSUZ_F03746 [Eucalyptus grandis]
Length = 275
Score = 148 bits (373), Expect = 7e-42
Identities = 78/109 (71%), Positives = 88/109 (80%), Gaps = 2/109 (1%)
Frame = +1
Query: 49 TSMAQAVATPVIPSFSLICNTSITKTHHS--NSISFPISTPTKFGGLSIKCARVGGVEIP 222
T+MAQA+ATPV PS SLICN S +++SFP++ P K GLSI+CARVGGVEIP
Sbjct: 102 TTMAQALATPVAPSLSLICNRGGGGGSASPFSALSFPVAAPPKLQGLSIRCARVGGVEIP 161
Query: 223 NAKRVQYSLQYIHGIGRTRALQILNDLKMENKITKDLSEEELITLRDEV 369
N KRV+YSLQYIHG+GRTRA QIL DL MENKITKDLSEEEL TLRDEV
Sbjct: 162 NNKRVEYSLQYIHGVGRTRARQILCDLAMENKITKDLSEEELTTLRDEV 210
>XP_006355960.1 PREDICTED: 30S ribosomal protein S13, chloroplastic [Solanum
tuberosum]
Length = 168
Score = 144 bits (363), Expect = 1e-41
Identities = 75/105 (71%), Positives = 84/105 (80%)
Frame = +1
Query: 55 MAQAVATPVIPSFSLICNTSITKTHHSNSISFPISTPTKFGGLSIKCARVGGVEIPNAKR 234
MAQ +ATPV+PS SLICNTS H S S S P S P K GGL IKC RVGGVE+PN KR
Sbjct: 1 MAQTLATPVLPSLSLICNTSSISKHSSLSFSTPTSFP-KTGGLVIKCVRVGGVEVPNNKR 59
Query: 235 VQYSLQYIHGIGRTRALQILNDLKMENKITKDLSEEELITLRDEV 369
V++SLQYIHGIGRT A QIL DL+MENK+ KD+SEEELITLR+EV
Sbjct: 60 VEFSLQYIHGIGRTAARQILVDLQMENKVMKDMSEEELITLREEV 104
>XP_007018955.1 PREDICTED: 30S ribosomal protein S13, chloroplastic [Theobroma
cacao] EOY16180.1 Ribosomal protein S13/S18 family
[Theobroma cacao]
Length = 168
Score = 144 bits (363), Expect = 1e-41
Identities = 74/105 (70%), Positives = 86/105 (81%)
Frame = +1
Query: 55 MAQAVATPVIPSFSLICNTSITKTHHSNSISFPISTPTKFGGLSIKCARVGGVEIPNAKR 234
MAQ +A PV PS S ICN + + SNS+S P+S P K+ LSI+CARVGGVEIPN KR
Sbjct: 1 MAQTLAMPVAPSLSFICNKT-SSLSLSNSVSLPLSNPPKYRSLSIECARVGGVEIPNNKR 59
Query: 235 VQYSLQYIHGIGRTRALQILNDLKMENKITKDLSEEELITLRDEV 369
V++SLQYIHGIGR+RA +IL DLKMENKITKDLSEEELIT+RDEV
Sbjct: 60 VEFSLQYIHGIGRSRARKILCDLKMENKITKDLSEEELITIRDEV 104
>XP_011001411.1 PREDICTED: 30S ribosomal protein S13, chloroplastic-like [Populus
euphratica]
Length = 168
Score = 144 bits (362), Expect = 2e-41
Identities = 75/105 (71%), Positives = 85/105 (80%)
Frame = +1
Query: 55 MAQAVATPVIPSFSLICNTSITKTHHSNSISFPISTPTKFGGLSIKCARVGGVEIPNAKR 234
MAQ +A PV+PS S ICN + T SNSIS P+S K LSI+CARVGGVEIPN+KR
Sbjct: 1 MAQTLAMPVVPSLSAICN-GLKNTSLSNSISLPVSNSPKVCSLSIRCARVGGVEIPNSKR 59
Query: 235 VQYSLQYIHGIGRTRALQILNDLKMENKITKDLSEEELITLRDEV 369
V+YSLQYIHGIGR+ A QIL+DL MENKITKDLSE+ELITLRDEV
Sbjct: 60 VEYSLQYIHGIGRSIARQILSDLTMENKITKDLSEDELITLRDEV 104
>XP_002306609.2 hypothetical protein POPTR_0005s16160g [Populus trichocarpa]
EEE93605.2 hypothetical protein POPTR_0005s16160g
[Populus trichocarpa]
Length = 168
Score = 143 bits (361), Expect = 2e-41
Identities = 75/105 (71%), Positives = 86/105 (81%)
Frame = +1
Query: 55 MAQAVATPVIPSFSLICNTSITKTHHSNSISFPISTPTKFGGLSIKCARVGGVEIPNAKR 234
MAQ +A PV+PS S ICN + T S+SIS P+S P K LSI+CARVGGVEIPN+KR
Sbjct: 1 MAQTLAMPVVPSLSAICN-GLKNTSLSSSISPPVSNPPKVCSLSIRCARVGGVEIPNSKR 59
Query: 235 VQYSLQYIHGIGRTRALQILNDLKMENKITKDLSEEELITLRDEV 369
V+YSLQYIHGIGR+ A QIL+DL MENKITKDLSE+ELITLRDEV
Sbjct: 60 VEYSLQYIHGIGRSIARQILSDLTMENKITKDLSEDELITLRDEV 104
>ADR30788.1 chloroplast 30S ribosomal protein S13 [Hevea brasiliensis]
Length = 168
Score = 143 bits (361), Expect = 2e-41
Identities = 75/105 (71%), Positives = 83/105 (79%)
Frame = +1
Query: 55 MAQAVATPVIPSFSLICNTSITKTHHSNSISFPISTPTKFGGLSIKCARVGGVEIPNAKR 234
MAQ +A PV PS SLICN S +S PIS P K GLSI+CARVGGVEIPN KR
Sbjct: 1 MAQTLAMPVAPSLSLICN-GWRNNSLSTFVSLPISNPPKIHGLSIQCARVGGVEIPNNKR 59
Query: 235 VQYSLQYIHGIGRTRALQILNDLKMENKITKDLSEEELITLRDEV 369
V+YSLQYIHG+GR+RA QIL+DL M+NKITKDLSEEELITLRDEV
Sbjct: 60 VEYSLQYIHGVGRSRARQILSDLSMQNKITKDLSEEELITLRDEV 104
>XP_006434117.1 hypothetical protein CICLE_v10002692mg [Citrus clementina]
ESR47357.1 hypothetical protein CICLE_v10002692mg
[Citrus clementina] KDO80786.1 hypothetical protein
CISIN_1g030930mg [Citrus sinensis]
Length = 126
Score = 142 bits (357), Expect = 3e-41
Identities = 70/105 (66%), Positives = 84/105 (80%)
Frame = +1
Query: 55 MAQAVATPVIPSFSLICNTSITKTHHSNSISFPISTPTKFGGLSIKCARVGGVEIPNAKR 234
M Q +A PV P+ S+ICN + S+SFP+S ++ GLSI+CARVGGVEIPN KR
Sbjct: 1 MVQTLAMPVAPALSVICNGHNNNLLTNASLSFPVSKQPQYPGLSIQCARVGGVEIPNNKR 60
Query: 235 VQYSLQYIHGIGRTRALQILNDLKMENKITKDLSEEELITLRDEV 369
++YSLQYIHG+GRTRA QIL DLKMENKITKD+SEEELIT+RDEV
Sbjct: 61 IEYSLQYIHGVGRTRARQILVDLKMENKITKDMSEEELITIRDEV 105
>CDP19788.1 unnamed protein product [Coffea canephora]
Length = 169
Score = 143 bits (360), Expect = 3e-41
Identities = 75/106 (70%), Positives = 89/106 (83%), Gaps = 1/106 (0%)
Frame = +1
Query: 55 MAQAVATPVIPSFSLICNTSITKTHHSNSISFPIST-PTKFGGLSIKCARVGGVEIPNAK 231
MAQ++A PV+PSFSLICNT+ +K S+S S P S+ P K GGLSI+CARVGGVEIPN+K
Sbjct: 1 MAQSLAVPVLPSFSLICNTTSSK-RTSSSFSLPASSVPPKIGGLSIRCARVGGVEIPNSK 59
Query: 232 RVQYSLQYIHGIGRTRALQILNDLKMENKITKDLSEEELITLRDEV 369
RV++SLQYIHGIGRT A QIL DL M+NK TKDLSEEEL +LR+EV
Sbjct: 60 RVEFSLQYIHGIGRTTAKQILVDLGMDNKFTKDLSEEELTSLREEV 105