BLASTX nr result

ID: Panax25_contig00028161 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00028161
         (886 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KZV43497.1 hypothetical protein F511_19041 [Dorcoceras hygrometr...    57   9e-07
XP_006293763.1 hypothetical protein CARUB_v10022723mg [Capsella ...    59   3e-06
KZM80659.1 hypothetical protein DCAR_031886 [Daucus carota subsp...    58   5e-06
KVH93915.1 Nucleoporin, NSP1-like, C-terminal [Cynara cardunculu...    58   9e-06
NP_001332778.1 nucleoporin-like protein [Solanum lycopersicum]         58   1e-05
XP_015060576.1 PREDICTED: nuclear pore complex protein NUP62 [So...    58   1e-05
XP_017228456.1 PREDICTED: nuclear pore complex protein NUP62 iso...    58   1e-05
XP_017228455.1 PREDICTED: nuclear pore complex protein NUP62 iso...    58   1e-05

>KZV43497.1 hypothetical protein F511_19041 [Dorcoceras hygrometricum]
          Length = 120

 Score = 57.0 bits (136), Expect = 9e-07
 Identities = 25/27 (92%), Positives = 27/27 (100%)
 Frame = +2

Query: 746 TDGMTPLDVVVRILNNQLSSLMWIDEK 826
           TDGMTPLD+VVRILNNQLSSLMW+DEK
Sbjct: 64  TDGMTPLDIVVRILNNQLSSLMWVDEK 90


>XP_006293763.1 hypothetical protein CARUB_v10022723mg [Capsella rubella]
           EOA26661.1 hypothetical protein CARUB_v10022723mg
           [Capsella rubella]
          Length = 723

 Score = 59.3 bits (142), Expect = 3e-06
 Identities = 28/30 (93%), Positives = 29/30 (96%)
 Frame = +2

Query: 749 DGMTPLDVVVRILNNQLSSLMWIDEKVRFV 838
           DGM+PLDVVVRILNNQLSSLMWIDEKV FV
Sbjct: 682 DGMSPLDVVVRILNNQLSSLMWIDEKVSFV 711


>KZM80659.1 hypothetical protein DCAR_031886 [Daucus carota subsp. sativus]
          Length = 282

 Score = 57.8 bits (138), Expect = 5e-06
 Identities = 27/27 (100%), Positives = 27/27 (100%)
 Frame = +2

Query: 746 TDGMTPLDVVVRILNNQLSSLMWIDEK 826
           TDGMTPLDVVVRILNNQLSSLMWIDEK
Sbjct: 226 TDGMTPLDVVVRILNNQLSSLMWIDEK 252


>KVH93915.1 Nucleoporin, NSP1-like, C-terminal [Cynara cardunculus var.
           scolymus]
          Length = 631

 Score = 57.8 bits (138), Expect = 9e-06
 Identities = 27/27 (100%), Positives = 27/27 (100%)
 Frame = +2

Query: 746 TDGMTPLDVVVRILNNQLSSLMWIDEK 826
           TDGMTPLDVVVRILNNQLSSLMWIDEK
Sbjct: 574 TDGMTPLDVVVRILNNQLSSLMWIDEK 600


>NP_001332778.1 nucleoporin-like protein [Solanum lycopersicum]
          Length = 758

 Score = 57.8 bits (138), Expect = 1e-05
 Identities = 27/27 (100%), Positives = 27/27 (100%)
 Frame = +2

Query: 746 TDGMTPLDVVVRILNNQLSSLMWIDEK 826
           TDGMTPLDVVVRILNNQLSSLMWIDEK
Sbjct: 701 TDGMTPLDVVVRILNNQLSSLMWIDEK 727


>XP_015060576.1 PREDICTED: nuclear pore complex protein NUP62 [Solanum pennellii]
          Length = 764

 Score = 57.8 bits (138), Expect = 1e-05
 Identities = 27/27 (100%), Positives = 27/27 (100%)
 Frame = +2

Query: 746 TDGMTPLDVVVRILNNQLSSLMWIDEK 826
           TDGMTPLDVVVRILNNQLSSLMWIDEK
Sbjct: 707 TDGMTPLDVVVRILNNQLSSLMWIDEK 733


>XP_017228456.1 PREDICTED: nuclear pore complex protein NUP62 isoform X3 [Daucus
           carota subsp. sativus]
          Length = 785

 Score = 57.8 bits (138), Expect = 1e-05
 Identities = 27/27 (100%), Positives = 27/27 (100%)
 Frame = +2

Query: 746 TDGMTPLDVVVRILNNQLSSLMWIDEK 826
           TDGMTPLDVVVRILNNQLSSLMWIDEK
Sbjct: 729 TDGMTPLDVVVRILNNQLSSLMWIDEK 755


>XP_017228455.1 PREDICTED: nuclear pore complex protein NUP62 isoform X2 [Daucus
           carota subsp. sativus]
          Length = 786

 Score = 57.8 bits (138), Expect = 1e-05
 Identities = 27/27 (100%), Positives = 27/27 (100%)
 Frame = +2

Query: 746 TDGMTPLDVVVRILNNQLSSLMWIDEK 826
           TDGMTPLDVVVRILNNQLSSLMWIDEK
Sbjct: 730 TDGMTPLDVVVRILNNQLSSLMWIDEK 756


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