BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00027286
         (1081 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

JAU08363.1 Retrovirus-related Pol polyprotein from transposon TN...   421   e-133
JAU51269.1 Retrovirus-related Pol polyprotein from transposon TN...   389   e-132
KYP65378.1 Retrovirus-related Pol polyprotein from transposon TN...   340   e-113
OMP03432.1 Integrase, catalytic core [Corchorus capsularis]           363   e-112
JAU09122.1 Retrovirus-related Pol polyprotein from transposon TN...   267   8e-84
XP_013688817.1 PREDICTED: uncharacterized protein LOC106392554, ...   284   1e-82
CAB71063.1 copia-type polyprotein [Arabidopsis thaliana]              274   3e-79
AAD50001.1 Hypothetical protein [Arabidopsis thaliana]                274   3e-79
AAG50698.1 copia-type polyprotein, putative [Arabidopsis thalian...   272   9e-79
CAN63563.1 hypothetical protein VITISV_003097 [Vitis vinifera]        269   2e-78
CAB75469.1 copia-type reverse transcriptase-like protein [Arabid...   270   3e-78
ABR16307.1 unknown [Picea sitchensis]                                 254   4e-78
XP_016709245.1 PREDICTED: LOW QUALITY PROTEIN: pleiotropic drug ...   270   6e-78
AAG60117.1 copia-type polyprotein, putative [Arabidopsis thaliana]    270   6e-78
KYP66219.1 Retrovirus-related Pol polyprotein from transposon TN...   267   8e-78
KYP69041.1 Retrovirus-related Pol polyprotein from transposon TN...   267   6e-77
KYP44533.1 Retrovirus-related Pol polyprotein from transposon TN...   267   6e-77
GAU51371.1 hypothetical protein TSUD_247260 [Trifolium subterran...   264   8e-76
KYP66220.1 Retrovirus-related Pol polyprotein from transposon TN...   263   2e-75
KYP67736.1 Retrovirus-related Pol polyprotein from transposon TN...   241   9e-75

>JAU08363.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Noccaea
            caerulescens]
          Length = 1335

 Score =  421 bits (1082), Expect = e-133
 Identities = 193/356 (54%), Positives = 261/356 (73%)
 Frame = -1

Query: 1081 KNLASVSQIIDDGRYVLFGPKNVQILSNIKHIEADVLFTGRRKESLYLLSASDAYVEKTS 902
            KNL SV   +D G YVLFGPK+V+ L NI+ ++ADV+ TG R + LY+LSAS++Y+EK S
Sbjct: 373  KNLLSVVNAVDSGNYVLFGPKDVKFLKNIQELKADVVHTGARVKDLYVLSASNSYIEKMS 432

Query: 901  QNESATLWHNRLGHVGYQLLQKISTKKLLDGVPLFNEIHHDVVCPGCQYGKSHCLPFPNS 722
             N++  +WH RLGH+    L+ +  K L++G+P         +C GCQYGKSH LPF NS
Sbjct: 433  TNDNDFIWHARLGHINMTKLKVMVNKDLVNGLPKLKIKDEGKLCEGCQYGKSHRLPFDNS 492

Query: 721  KNRASAALQLVHSDLMGPTKTPSYSSFRYVMVLVDEFSRFTWVYFLENKSEAFSNFVKFK 542
             +R +A L+ VHSDLMGPT+T SYS FRY+++ VD+FSR+TWVYF++ KSE FS F +FK
Sbjct: 493  TSRCNAPLERVHSDLMGPTRTSSYSGFRYMLLFVDDFSRYTWVYFVKEKSEVFSKFQEFK 552

Query: 541  EQVEKEFGLQIKCMRTDNGGEYMSDQFLNYCREHDIQRQMTFRETPQQNGVVERKLAYLT 362
              VE E G +IK +RTDNGGE+MS++FL++CR+  I+R+ T   TPQQNGV ERK+ +L+
Sbjct: 553  VTVEGELGRKIKTLRTDNGGEFMSNEFLSFCRKQGIKREFTCPYTPQQNGVAERKIRHLS 612

Query: 361  SMCLSWLHTKNLPRKLWAAAVQSTCHVINRLPSWPGTEPSPFEALYHHTPSVSYFRVFGL 182
              C SWLH KNLP+ LWA  ++   +VINR+P  P    SP+E ++   P+V +FR+FG 
Sbjct: 613  ETCRSWLHAKNLPKALWAEGMRCAAYVINRMPLSPNNMKSPYEMVHGKKPTVKHFRIFGS 672

Query: 181  VCYAHVSKTNQTKLDPRARRCIFVGYDTHRKGWKCMDPETKKVDVSRDVVFDEVSS 14
            +CY HV  + +TKL+ +A++CIFVGYD  RKGW+CMDPET +  +SRDVVFDEVSS
Sbjct: 673  ICYVHVFDSQRTKLEAKAKKCIFVGYDEQRKGWRCMDPETHRYTISRDVVFDEVSS 728


>JAU51269.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Noccaea caerulescens]
          Length = 334

 Score =  389 bits (998), Expect = e-132
 Identities = 176/334 (52%), Positives = 243/334 (72%)
 Frame = -1

Query: 1045 GRYVLFGPKNVQILSNIKHIEADVLFTGRRKESLYLLSASDAYVEKTSQNESATLWHNRL 866
            G YVLFG K+V+ L NI+ ++ADV+ TG R + LY+LSAS++Y+EK S N++  +WH RL
Sbjct: 1    GNYVLFGTKDVKFLKNIQELKADVVHTGARVKDLYVLSASNSYIEKMSTNDNDFIWHARL 60

Query: 865  GHVGYQLLQKISTKKLLDGVPLFNEIHHDVVCPGCQYGKSHCLPFPNSKNRASAALQLVH 686
            GH+    L+ +  K L++G+P         +C GCQYGKSH LPF NS +R +A L+ VH
Sbjct: 61   GHINMTKLKVMVNKDLVNGLPKLKIQDEGKLCEGCQYGKSHRLPFDNSTSRCNAPLERVH 120

Query: 685  SDLMGPTKTPSYSSFRYVMVLVDEFSRFTWVYFLENKSEAFSNFVKFKEQVEKEFGLQIK 506
            SDLMGPT+T SYS FRY+++ VD+FSR+TWVYF++ KSE FS F +FK  VE E G +IK
Sbjct: 121  SDLMGPTRTSSYSGFRYMLLFVDDFSRYTWVYFVKEKSEVFSKFQEFKVTVEGELGRKIK 180

Query: 505  CMRTDNGGEYMSDQFLNYCREHDIQRQMTFRETPQQNGVVERKLAYLTSMCLSWLHTKNL 326
             +RTDNGGE+MS++FL++CR+  I+R+ T   TPQQNGV ERK+ +L+  C SWLH KNL
Sbjct: 181  TLRTDNGGEFMSNEFLSFCRKQGIKREFTCPYTPQQNGVAERKIRHLSETCRSWLHAKNL 240

Query: 325  PRKLWAAAVQSTCHVINRLPSWPGTEPSPFEALYHHTPSVSYFRVFGLVCYAHVSKTNQT 146
            P+ LWA  ++   +VINR+P  P    SP+E ++   P+V +FR+FG +CY HV  + +T
Sbjct: 241  PKALWAEGMRCAAYVINRMPLSPNNMKSPYEMVHGKKPTVKHFRIFGSICYVHVFDSQRT 300

Query: 145  KLDPRARRCIFVGYDTHRKGWKCMDPETKKVDVS 44
            KL+ +A++CIFVGYD  RKGW+CMDPET +  +S
Sbjct: 301  KLEAKAKKCIFVGYDEQRKGWRCMDPETHRYTIS 334


>KYP65378.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 337

 Score =  340 bits (873), Expect = e-113
 Identities = 161/320 (50%), Positives = 224/320 (70%)
 Frame = -1

Query: 973 LFTGRRKESLYLLSASDAYVEKTSQNESATLWHNRLGHVGYQLLQKISTKKLLDGVPLFN 794
           +  GRR ES+Y++SA +AYV K  +NE+A LWH RLGHV Y  L+ +  + +L G+P   
Sbjct: 4   IMKGRRLESVYVMSAQEAYVNKARKNETADLWHARLGHVSYNRLKAMMKQSMLRGLPNL- 62

Query: 793 EIHHDVVCPGCQYGKSHCLPFPNSKNRASAALQLVHSDLMGPTKTPSYSSFRYVMVLVDE 614
           E+  +VVC GCQYGK+H LP+  SK +A A L+LVHSD+ GP K  S S  +Y++ ++D+
Sbjct: 63  EMRENVVCVGCQYGKAHELPYEESKYKAKAPLELVHSDVFGPVKQLSISKNKYMITIIDD 122

Query: 613 FSRFTWVYFLENKSEAFSNFVKFKEQVEKEFGLQIKCMRTDNGGEYMSDQFLNYCREHDI 434
           +SR+ WVYFL+ KSEA   F++FKE++EKE G  I+C+RTDNGGEY S +F  Y ++  I
Sbjct: 123 YSRYVWVYFLKEKSEALKKFIEFKEKIEKEVGRMIRCLRTDNGGEYTSKEFNQYLQKCGI 182

Query: 433 QRQMTFRETPQQNGVVERKLAYLTSMCLSWLHTKNLPRKLWAAAVQSTCHVINRLPSWPG 254
           +RQ+T + T QQNG++ERK  +L   C S LH+KN+P + W   ++++ +VINRLP    
Sbjct: 183 RRQLTCQNTLQQNGIIERKNRHLVKTCRSMLHSKNVPPRFWTECMKTSAYVINRLPQARL 242

Query: 253 TEPSPFEALYHHTPSVSYFRVFGLVCYAHVSKTNQTKLDPRARRCIFVGYDTHRKGWKCM 74
              SP E L++  PSVSYFRVFG VCY  +    ++K + +A RCIFVGYD+ RKGW+C 
Sbjct: 243 GFVSPHEKLWNTKPSVSYFRVFGCVCYVFMPGQERSKFEKKAIRCIFVGYDSQRKGWRCC 302

Query: 73  DPETKKVDVSRDVVFDEVSS 14
           +P T +  VSR+VVFDE SS
Sbjct: 303 NPTTGRCYVSRNVVFDEASS 322


>OMP03432.1 Integrase, catalytic core [Corchorus capsularis]
          Length = 1347

 Score =  363 bits (933), Expect = e-112
 Identities = 175/356 (49%), Positives = 244/356 (68%)
 Frame = -1

Query: 1081 KNLASVSQIIDDGRYVLFGPKNVQILSNIKHIEADVLFTGRRKESLYLLSASDAYVEKTS 902
            KNL SV+Q+ D G YV+FGP++V++  +       ++  G+  E +Y++SA  AYV+KT 
Sbjct: 408  KNLLSVAQLTDPGNYVVFGPRDVKVYPSFTPTCPPIM-EGKWMEYVYVMSAQTAYVDKTR 466

Query: 901  QNESATLWHNRLGHVGYQLLQKISTKKLLDGVPLFNEIHHDVVCPGCQYGKSHCLPFPNS 722
            +NE+A LWH RLGHV Y  L+ +  K +L G+P   ++  D VC GCQYG++H LP+  S
Sbjct: 467  RNETADLWHARLGHVSYFKLKAMMKKSMLKGLPQL-DVKEDTVCAGCQYGRAHQLPYEES 525

Query: 721  KNRASAALQLVHSDLMGPTKTPSYSSFRYVMVLVDEFSRFTWVYFLENKSEAFSNFVKFK 542
            K +A   LQLVHSD+ G  K PS S ++Y++  +D++SR+ WV F++ KSEA + F +FK
Sbjct: 526  KFKAKMPLQLVHSDVFGKMKQPSVSGYQYMITFIDDYSRYVWVDFMKEKSEALTKFKEFK 585

Query: 541  EQVEKEFGLQIKCMRTDNGGEYMSDQFLNYCREHDIQRQMTFRETPQQNGVVERKLAYLT 362
            E+VEKE G +I+C+RTDNGGEY S +F N+ RE  I+RQ+T   TPQQNGV ERK  +L 
Sbjct: 586  ERVEKEVGRKIQCLRTDNGGEYTSKEFSNFLRECRIRRQLTCPNTPQQNGVAERKNMHLA 645

Query: 361  SMCLSWLHTKNLPRKLWAAAVQSTCHVINRLPSWPGTEPSPFEALYHHTPSVSYFRVFGL 182
             +C S LH +N+P + WA  +++  HV+NRLP       SPF+ L++  P+VS+FRVFG 
Sbjct: 646  EICRSMLHARNVPPRFWAECMKTVAHVVNRLPQARLDFISPFQKLWNMKPTVSHFRVFGC 705

Query: 181  VCYAHVSKTNQTKLDPRARRCIFVGYDTHRKGWKCMDPETKKVDVSRDVVFDEVSS 14
            +CY  V    ++K D +A RCIFVGYD  RKGW+C DP T +  VSR+VVFDE SS
Sbjct: 706  ICYVFVPDHLRSKFDKKAIRCIFVGYDDQRKGWRCCDPTTGRCYVSRNVVFDEASS 761


>JAU09122.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Noccaea caerulescens]
          Length = 357

 Score =  267 bits (683), Expect = 8e-84
 Identities = 143/345 (41%), Positives = 201/345 (58%), Gaps = 26/345 (7%)
 Frame = -1

Query: 979  DVLFTGRRK--------------------ESLYLLSASDAYVEK-----TSQNESATLWH 875
            D+LFTG RK                        LL  S+  VE+        +  A LWH
Sbjct: 2    DILFTGDRKTCNIFHPTRGKIAESVMSTNRMFILLGESNVAVEEEKCLQVDISNKAELWH 61

Query: 874  NRLGHVGYQLLQKISTKKLLDGVPLFNEIHHDVVCPGCQYGKSHCLPFPN-SKNRASAAL 698
            +R GH+ Y+ L  + +K+++ G+P   ++    VC  C  GK H +PFP  SK RA+  L
Sbjct: 62   HRYGHLSYKGLNTLCSKEMVVGLPEIEDVK--TVCDACVRGKHHRVPFPKQSKWRATERL 119

Query: 697  QLVHSDLMGPTKTPSYSSFRYVMVLVDEFSRFTWVYFLENKSEAFSNFVKFKEQVEKEFG 518
            +L+HSDL GP    S S  RY++  +D+FSR TW+YF+  KSEAF  F  FK  VEK+ G
Sbjct: 120  ELIHSDLCGPISPSSNSQIRYLISFIDDFSRKTWIYFVGEKSEAFDRFKTFKAFVEKQTG 179

Query: 517  LQIKCMRTDNGGEYMSDQFLNYCREHDIQRQMTFRETPQQNGVVERKLAYLTSMCLSWLH 338
            L IK +RTD GGEY S++F  +CREH I+RQ+T   TPQQNGV ERK   + +M  + L 
Sbjct: 180  LLIKGLRTDRGGEYNSNEFKGFCREHGIKRQLTTAFTPQQNGVAERKNRTIMNMVRAALL 239

Query: 337  TKNLPRKLWAAAVQSTCHVINRLPSWPGTEPSPFEALYHHTPSVSYFRVFGLVCYAHVSK 158
             K +P+  W  AVQ   H++NR P+    + +P EA     PSV +FRVFG V Y H+  
Sbjct: 240  EKEVPKSFWPDAVQWVNHILNRSPTLVVKDKTPEEAWSGKKPSVEHFRVFGCVGYVHIPD 299

Query: 157  TNQTKLDPRARRCIFVGYDTHRKGWKCMDPETKKVDVSRDVVFDE 23
              ++KLD ++ +C+ +G+ +  K +K  DP TKK+ +SRDV+F+E
Sbjct: 300  AKRSKLDDKSVKCVLLGFSSESKAFKMFDPATKKIHISRDVIFEE 344


>XP_013688817.1 PREDICTED: uncharacterized protein LOC106392554, partial [Brassica
            napus]
          Length = 2682

 Score =  284 bits (726), Expect = 1e-82
 Identities = 147/355 (41%), Positives = 216/355 (60%), Gaps = 3/355 (0%)
 Frame = -1

Query: 1078 NLASVSQIIDDGRYVLFGPKNVQILSNIKHIEADVLFTGRRKESLYLLSASD--AYVEKT 905
            N+ S+ Q+++ G  +     ++ +  N  ++   V  +  R   +++L+  +  A   K 
Sbjct: 411  NILSLGQLLEKGYDIRLKDNSLSLRDNANNLITKVPMSSNR---MFVLNIQNDIARCLKM 467

Query: 904  SQNESATLWHNRLGHVGYQLLQKISTKKLLDGVPLFNEIHHDVVCPGCQYGKSHCLPFPN 725
               E + LWH R GH+ +  L+ +S K+++ G+P  N  H + VC GC  GK   + FP 
Sbjct: 468  CYKEESWLWHLRFGHLNFGGLELLSKKEMVKGLPCIN--HPNQVCEGCLLGKQFKMSFPK 525

Query: 724  -SKNRASAALQLVHSDLMGPTKTPSYSSFRYVMVLVDEFSRFTWVYFLENKSEAFSNFVK 548
             S+ RA   L+L+H+D+ GP K  S     Y ++ +D+FSR TWVYFL+ KSE F NF K
Sbjct: 526  ESETRARKPLELIHTDVCGPIKPSSLGKSNYFLLFIDDFSRKTWVYFLKQKSEVFENFKK 585

Query: 547  FKEQVEKEFGLQIKCMRTDNGGEYMSDQFLNYCREHDIQRQMTFRETPQQNGVVERKLAY 368
            FK  VEKE GL+IK MR+D GGE+MS +FL YC ++ I+RQ+T   TPQQNGV ERK   
Sbjct: 586  FKAHVEKESGLKIKSMRSDRGGEFMSKEFLKYCEDNGIRRQLTVPRTPQQNGVAERKNRT 645

Query: 367  LTSMCLSWLHTKNLPRKLWAAAVQSTCHVINRLPSWPGTEPSPFEALYHHTPSVSYFRVF 188
            +  M  S L +K LP++LWA AV    ++ NR P+    E +P EA     P VS+ RVF
Sbjct: 646  ILEMARSMLKSKKLPKELWAEAVACAVYISNRSPTKSVLEKTPQEAWSGRKPGVSHLRVF 705

Query: 187  GLVCYAHVSKTNQTKLDPRARRCIFVGYDTHRKGWKCMDPETKKVDVSRDVVFDE 23
            G + +AHV    ++KLD ++ + IF+GYD + KG+K  +PETKK  +SR+V+FDE
Sbjct: 706  GSIAHAHVPDEKRSKLDDKSEKYIFIGYDANSKGYKLYNPETKKTIISRNVIFDE 760



 Score =  284 bits (726), Expect = 1e-82
 Identities = 147/355 (41%), Positives = 216/355 (60%), Gaps = 3/355 (0%)
 Frame = -1

Query: 1078 NLASVSQIIDDGRYVLFGPKNVQILSNIKHIEADVLFTGRRKESLYLLSASD--AYVEKT 905
            N+ S+ Q+++ G  +     ++ +  N  ++   V  +  R   +++L+  +  A   K 
Sbjct: 1750 NILSLGQLLEKGYDIRLKDNSLSLRDNANNLITKVPMSSNR---MFVLNIQNDIARCLKM 1806

Query: 904  SQNESATLWHNRLGHVGYQLLQKISTKKLLDGVPLFNEIHHDVVCPGCQYGKSHCLPFPN 725
               E + LWH R GH+ +  L+ +S K+++ G+P  N  H + VC GC  GK   + FP 
Sbjct: 1807 CYKEESWLWHLRFGHLNFGGLELLSKKEMVKGLPCIN--HPNQVCEGCLLGKQFKMSFPK 1864

Query: 724  -SKNRASAALQLVHSDLMGPTKTPSYSSFRYVMVLVDEFSRFTWVYFLENKSEAFSNFVK 548
             S+ RA   L+L+H+D+ GP K  S     Y ++ +D+FSR TWVYFL+ KSE F NF K
Sbjct: 1865 ESETRARKPLELIHTDVCGPIKPSSLGKSNYFLLFIDDFSRKTWVYFLKQKSEVFENFKK 1924

Query: 547  FKEQVEKEFGLQIKCMRTDNGGEYMSDQFLNYCREHDIQRQMTFRETPQQNGVVERKLAY 368
            FK  VEKE GL+IK MR+D GGE+MS +FL YC ++ I+RQ+T   TPQQNGV ERK   
Sbjct: 1925 FKAHVEKESGLKIKSMRSDRGGEFMSKEFLKYCEDNGIRRQLTVPRTPQQNGVAERKNRT 1984

Query: 367  LTSMCLSWLHTKNLPRKLWAAAVQSTCHVINRLPSWPGTEPSPFEALYHHTPSVSYFRVF 188
            +  M  S L +K LP++LWA AV    ++ NR P+    E +P EA     P VS+ RVF
Sbjct: 1985 ILEMARSMLKSKKLPKELWAEAVACAVYISNRSPTKSVLEKTPQEAWSGRKPGVSHLRVF 2044

Query: 187  GLVCYAHVSKTNQTKLDPRARRCIFVGYDTHRKGWKCMDPETKKVDVSRDVVFDE 23
            G + +AHV    ++KLD ++ + IF+GYD + KG+K  +PETKK  +SR+V+FDE
Sbjct: 2045 GSIAHAHVPDEKRSKLDDKSEKYIFIGYDANSKGYKLYNPETKKTIISRNVIFDE 2099


>CAB71063.1 copia-type polyprotein [Arabidopsis thaliana]
          Length = 1352

 Score =  274 bits (700), Expect = 3e-79
 Identities = 143/355 (40%), Positives = 214/355 (60%), Gaps = 3/355 (0%)
 Frame = -1

Query: 1078 NLASVSQIIDDGRYVLFGPKNVQILSNIKHIEADVLFTGRRKESLYLLSASDAYVE--KT 905
            N+ S+ Q+++ G  +     N+ I     ++   V  +   K  +++L+  +   +  K 
Sbjct: 403  NILSLGQLLEKGYDIRLKDNNLSIRDQESNLITKVPMS---KNRMFVLNIRNDIAQCLKM 459

Query: 904  SQNESATLWHNRLGHVGYQLLQKISTKKLLDGVPLFNEIHHDVVCPGCQYGKSHCLPFPN 725
               E + LWH R GH+ +  L+ +S K+++ G+P  N  H + VC GC  GK   + FP 
Sbjct: 460  CYKEESWLWHLRFGHLNFGGLELLSRKEMVRGLPCIN--HPNQVCEGCLLGKQFKMSFPK 517

Query: 724  -SKNRASAALQLVHSDLMGPTKTPSYSSFRYVMVLVDEFSRFTWVYFLENKSEAFSNFVK 548
             S +RA   L+L+H+D+ GP K  S     Y ++ +D+FSR TWVYFL+ KSE F  F K
Sbjct: 518  ESSSRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKK 577

Query: 547  FKEQVEKEFGLQIKCMRTDNGGEYMSDQFLNYCREHDIQRQMTFRETPQQNGVVERKLAY 368
            FK  VEKE GL IK MR+D GGE+ S +FL YC ++ I+RQ+T   +PQQNGVVERK   
Sbjct: 578  FKAHVEKESGLVIKTMRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVVERKNRT 637

Query: 367  LTSMCLSWLHTKNLPRKLWAAAVQSTCHVINRLPSWPGTEPSPFEALYHHTPSVSYFRVF 188
            +  M  S L +K LP++LWA AV    +++NR P+   +  +P EA     P VS+ RVF
Sbjct: 638  ILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVF 697

Query: 187  GLVCYAHVSKTNQTKLDPRARRCIFVGYDTHRKGWKCMDPETKKVDVSRDVVFDE 23
            G + +AHV    ++KLD ++ + IF+GYD + KG+K  +P+TKK  +SR++VFDE
Sbjct: 698  GSIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDE 752


>AAD50001.1 Hypothetical protein [Arabidopsis thaliana]
          Length = 1352

 Score =  274 bits (700), Expect = 3e-79
 Identities = 143/355 (40%), Positives = 214/355 (60%), Gaps = 3/355 (0%)
 Frame = -1

Query: 1078 NLASVSQIIDDGRYVLFGPKNVQILSNIKHIEADVLFTGRRKESLYLLSASDAYVE--KT 905
            N+ S+ Q+++ G  +     N+ I     ++   V  +   K  +++L+  +   +  K 
Sbjct: 403  NILSLGQLLEKGYDIRLKDNNLSIRDQESNLITKVPMS---KNRMFVLNIRNDIAQCLKM 459

Query: 904  SQNESATLWHNRLGHVGYQLLQKISTKKLLDGVPLFNEIHHDVVCPGCQYGKSHCLPFPN 725
               E + LWH R GH+ +  L+ +S K+++ G+P  N  H + VC GC  GK   + FP 
Sbjct: 460  CYKEESWLWHLRFGHLNFGGLELLSRKEMVRGLPCIN--HPNQVCEGCLLGKQFKMSFPK 517

Query: 724  -SKNRASAALQLVHSDLMGPTKTPSYSSFRYVMVLVDEFSRFTWVYFLENKSEAFSNFVK 548
             S +RA   L+L+H+D+ GP K  S     Y ++ +D+FSR TWVYFL+ KSE F  F K
Sbjct: 518  ESSSRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKK 577

Query: 547  FKEQVEKEFGLQIKCMRTDNGGEYMSDQFLNYCREHDIQRQMTFRETPQQNGVVERKLAY 368
            FK  VEKE GL IK MR+D GGE+ S +FL YC ++ I+RQ+T   +PQQNGVVERK   
Sbjct: 578  FKAHVEKESGLVIKTMRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVVERKNRT 637

Query: 367  LTSMCLSWLHTKNLPRKLWAAAVQSTCHVINRLPSWPGTEPSPFEALYHHTPSVSYFRVF 188
            +  M  S L +K LP++LWA AV    +++NR P+   +  +P EA     P VS+ RVF
Sbjct: 638  ILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVF 697

Query: 187  GLVCYAHVSKTNQTKLDPRARRCIFVGYDTHRKGWKCMDPETKKVDVSRDVVFDE 23
            G + +AHV    ++KLD ++ + IF+GYD + KG+K  +P+TKK  +SR++VFDE
Sbjct: 698  GSIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDE 752


>AAG50698.1 copia-type polyprotein, putative [Arabidopsis thaliana] AAG50765.1
            copia-type polyprotein, putative [Arabidopsis thaliana]
          Length = 1320

 Score =  272 bits (696), Expect = 9e-79
 Identities = 142/355 (40%), Positives = 213/355 (60%), Gaps = 3/355 (0%)
 Frame = -1

Query: 1078 NLASVSQIIDDGRYVLFGPKNVQILSNIKHIEADVLFTGRRKESLYLLSASDAYVE--KT 905
            N+ S+ Q+++ G  +     N+ I     ++   V  +   K  +++L+  +   +  K 
Sbjct: 403  NILSLGQLLEKGYDIRLKDNNLSIRDQESNLITKVPMS---KNRMFVLNIRNDIAQCLKM 459

Query: 904  SQNESATLWHNRLGHVGYQLLQKISTKKLLDGVPLFNEIHHDVVCPGCQYGKSHCLPFPN 725
               E + LWH R GH+ +  L+ +S K+++ G+P  N  H + VC GC  GK   + FP 
Sbjct: 460  CYKEESWLWHLRFGHLNFGGLELLSRKEMVRGLPCIN--HPNQVCEGCLLGKQFKMSFPK 517

Query: 724  -SKNRASAALQLVHSDLMGPTKTPSYSSFRYVMVLVDEFSRFTWVYFLENKSEAFSNFVK 548
             S +RA   L+L+H+D+ GP K  S     Y ++ +D+FSR TWVYFL+ KSE F  F K
Sbjct: 518  ESSSRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKK 577

Query: 547  FKEQVEKEFGLQIKCMRTDNGGEYMSDQFLNYCREHDIQRQMTFRETPQQNGVVERKLAY 368
            FK  VEKE GL IK MR+D GGE+ S +FL YC ++ I+RQ+T   +PQQNGV ERK   
Sbjct: 578  FKAHVEKESGLVIKTMRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRT 637

Query: 367  LTSMCLSWLHTKNLPRKLWAAAVQSTCHVINRLPSWPGTEPSPFEALYHHTPSVSYFRVF 188
            +  M  S L +K LP++LWA AV    +++NR P+   +  +P EA     P VS+ RVF
Sbjct: 638  ILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVF 697

Query: 187  GLVCYAHVSKTNQTKLDPRARRCIFVGYDTHRKGWKCMDPETKKVDVSRDVVFDE 23
            G + +AHV    ++KLD ++ + IF+GYD + KG+K  +P+TKK  +SR++VFDE
Sbjct: 698  GSIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDE 752


>CAN63563.1 hypothetical protein VITISV_003097 [Vitis vinifera]
          Length = 1052

 Score =  269 bits (688), Expect = 2e-78
 Identities = 138/318 (43%), Positives = 193/318 (60%)
 Frame = -1

Query: 1081 KNLASVSQIIDDGRYVLFGPKNVQILSNIKHIEADVLFTGRRKESLYLLSASDAYVEKTS 902
            KNL SV+Q+   G +VLF P++V++  +++ +E  V+  G R ES+Y++    AYV+KT 
Sbjct: 294  KNLLSVAQLTSSGHFVLFSPQDVKVXRDLEIMEEPVI-KGWRLESIYVMFVETAYVDKTR 352

Query: 901  QNESATLWHNRLGHVGYQLLQKISTKKLLDGVPLFNEIHHDVVCPGCQYGKSHCLPFPNS 722
            +NE A LWH RL HV Y  L  +  K +L G+P                GK+H L +  S
Sbjct: 353  KNEIADLWHMRLSHVSYSKLTVMMKKSMLKGLPQLE-------------GKAHQLSYEES 399

Query: 721  KNRASAALQLVHSDLMGPTKTPSYSSFRYVMVLVDEFSRFTWVYFLENKSEAFSNFVKFK 542
            K +A   L+L+HSD+ GP K    S  +Y++  +D+FSR+ WVYF++ KSE FS F +FK
Sbjct: 400  KWKAKGPLELIHSDVFGPVKQAXLSGMKYMVTFIDDFSRYVWVYFMKEKSETFSKFKEFK 459

Query: 541  EQVEKEFGLQIKCMRTDNGGEYMSDQFLNYCREHDIQRQMTFRETPQQNGVVERKLAYLT 362
            E  E E   +I C+RTDNG  Y S++F  + RE  ++ Q T   T QQNGV ERK  +L 
Sbjct: 460  EMTEIEVDKRIHCLRTDNGXXYTSNEFFYFLRECRVRHQFTCANTLQQNGVAERKNRHLA 519

Query: 361  SMCLSWLHTKNLPRKLWAAAVQSTCHVINRLPSWPGTEPSPFEALYHHTPSVSYFRVFGL 182
             +C S LH KN+P + WA A+++   VINRLP       SPFE L++  P+VSYFRVFG 
Sbjct: 520  EICRSMLHAKNVPGRFWAEAMKTXAFVINRLPQQRLNFSSPFEKLWNIKPTVSYFRVFGC 579

Query: 181  VCYAHVSKTNQTKLDPRA 128
            VCY  V K  + K+D +A
Sbjct: 580  VCYVFVPKHLRNKMDKKA 597


>CAB75469.1 copia-type reverse transcriptase-like protein [Arabidopsis thaliana]
          Length = 1272

 Score =  270 bits (691), Expect = 3e-78
 Identities = 141/355 (39%), Positives = 212/355 (59%), Gaps = 3/355 (0%)
 Frame = -1

Query: 1078 NLASVSQIIDDGRYVLFGPKNVQILSNIKHIEADVLFTGRRKESLYLLSASDAYVE--KT 905
            N+ S+ Q+++ G  +     N+ I     ++   V  +   K  +++L+  +   +  K 
Sbjct: 403  NILSLGQLLEKGYDIRLKDNNLSIRDKESNLITKVPMS---KNRMFVLNIRNDIAQCLKM 459

Query: 904  SQNESATLWHNRLGHVGYQLLQKISTKKLLDGVPLFNEIHHDVVCPGCQYGKSHCLPFPN 725
               E + LWH R GH+ +  L+ +S K+++ G+P  N  H + VC GC  G    + FP 
Sbjct: 460  CYKEESWLWHLRFGHLNFGGLELLSRKEMVRGLPCIN--HPNQVCEGCLLGNQFKMSFPK 517

Query: 724  -SKNRASAALQLVHSDLMGPTKTPSYSSFRYVMVLVDEFSRFTWVYFLENKSEAFSNFVK 548
             S +RA   L+L+H+D+ GP K  S     Y ++ +D+FSR TWVYFL+ KSE F  F K
Sbjct: 518  ESSSRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKK 577

Query: 547  FKEQVEKEFGLQIKCMRTDNGGEYMSDQFLNYCREHDIQRQMTFRETPQQNGVVERKLAY 368
            FK  VEKE GL IK MR+D+GGE+ S +FL YC ++ I+RQ+T   +PQQNGV ERK   
Sbjct: 578  FKAHVEKESGLVIKTMRSDSGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRT 637

Query: 367  LTSMCLSWLHTKNLPRKLWAAAVQSTCHVINRLPSWPGTEPSPFEALYHHTPSVSYFRVF 188
            +  M  S L +K LP++LWA AV    +++NR P+   +  +P EA     P VS+ RVF
Sbjct: 638  ILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVF 697

Query: 187  GLVCYAHVSKTNQTKLDPRARRCIFVGYDTHRKGWKCMDPETKKVDVSRDVVFDE 23
            G + +AHV    + KLD ++ + IF+GYD + KG+K  +P+TKK  +SR++VFDE
Sbjct: 698  GSIAHAHVPDEKRNKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDE 752


>ABR16307.1 unknown [Picea sitchensis]
          Length = 407

 Score =  254 bits (649), Expect = 4e-78
 Identities = 139/356 (39%), Positives = 199/356 (55%), Gaps = 4/356 (1%)
 Frame = -1

Query: 1078 NLASVSQIIDDGRYVLFGPKNV---QILSNIKHIEADVLFTGRRKESLYLLSASDAYVEK 908
            NL SV+QI + G  V F         I SN K + +  +  G  K   +  +      E 
Sbjct: 9    NLLSVNQIANQGYKVEFYKDKCLIKDINSNYKVVASGYVENGLYKFGRFTSNEKALVAEV 68

Query: 907  TSQNESATLWHNRLGHVGYQLLQKISTKKLLDGVPLFNEIHHDVVCPGCQYGKSHCLPFP 728
             + +    LWH R+GH+ Y+ L  +   +++ G+P  ++     VC GC  GK H   F 
Sbjct: 69   DNVSR---LWHERMGHLNYKSLSLMKRFEMVYGLPKISQSQG--VCEGCMSGKQHMEKFI 123

Query: 727  NSKN-RASAALQLVHSDLMGPTKTPSYSSFRYVMVLVDEFSRFTWVYFLENKSEAFSNFV 551
              K+ RA   L LVHSDLMGP + PS S  RYV+  +D++SR  WVYFL+NK E F  F 
Sbjct: 124  KGKSWRAKTPLHLVHSDLMGPLEHPSISGSRYVLTFIDDYSRRIWVYFLKNKDEVFEKFK 183

Query: 550  KFKEQVEKEFGLQIKCMRTDNGGEYMSDQFLNYCREHDIQRQMTFRETPQQNGVVERKLA 371
            +FK  VEK+ G  IK +RTDNG EY++ +F +YC+ + I+R+ T   TPQQNGV ERK  
Sbjct: 184  EFKAFVEKQSGKSIKILRTDNGKEYVNKEFDHYCKYNGIKREHTVPYTPQQNGVAERKNR 243

Query: 370  YLTSMCLSWLHTKNLPRKLWAAAVQSTCHVINRLPSWPGTEPSPFEALYHHTPSVSYFRV 191
             L  M    LH +N+  K WA A+ +  +++NR P+      +P EA     P+VS+F+V
Sbjct: 244  TLMEMARCMLHARNMDPKFWAEAINTATYIVNRTPTIAVKHKTPEEAWSRRKPTVSHFKV 303

Query: 190  FGLVCYAHVSKTNQTKLDPRARRCIFVGYDTHRKGWKCMDPETKKVDVSRDVVFDE 23
            FG   Y H+    + KLD ++ +CI VGY    K ++  DPE  ++ + RDV+FDE
Sbjct: 304  FGCDVYVHIPDEKRKKLDRKSHKCIMVGYSETSKAYRVYDPEKNEILIRRDVIFDE 359


>XP_016709245.1 PREDICTED: LOW QUALITY PROTEIN: pleiotropic drug resistance protein
            3-like [Gossypium hirsutum]
          Length = 2801

 Score =  270 bits (691), Expect = 6e-78
 Identities = 147/362 (40%), Positives = 210/362 (58%), Gaps = 2/362 (0%)
 Frame = -1

Query: 1081 KNLASVSQIIDDGRYVLFGPKNVQILSNIKHIEADVLFTGRRKESLYLLSASDAYVEK-T 905
            +NL SV Q+++ G  ++F  KN  I    K+   +VL T   ++  +++  +    +   
Sbjct: 1735 QNLLSVGQLLEKGYSLIFEGKNCLI----KNAAGEVLTTVAMQDRTFIVDVNQLQAKAYA 1790

Query: 904  SQNESATLWHNRLGHVGYQLLQKISTKKLLDGVPLFNEIHHDVVCPGCQYGKSHCLPFPN 725
            SQ++   LWH R+GHV Y  L  +    L+  +        D VC  CQ GK   LPFP 
Sbjct: 1791 SQSDETDLWHRRMGHVNYNSLNMMQKMDLVSDMSKIEP--RDAVCEVCQLGKQTRLPFPV 1848

Query: 724  SKN-RASAALQLVHSDLMGPTKTPSYSSFRYVMVLVDEFSRFTWVYFLENKSEAFSNFVK 548
            +K  RA   LQLVH+D+ GP KT S +  RY ++ +D++SRF WV FL++KS+ + +F K
Sbjct: 1849 NKAWRAHGKLQLVHTDICGPMKTTSLNDSRYFVLFIDDYSRFCWVNFLKHKSDVYGSFCK 1908

Query: 547  FKEQVEKEFGLQIKCMRTDNGGEYMSDQFLNYCREHDIQRQMTFRETPQQNGVVERKLAY 368
            FK  VE +   ++KC+R+DNG EY+S +F   C +  IQ Q+T   TPQQNGV ERK   
Sbjct: 1909 FKALVENQANCKLKCLRSDNGSEYVSQKFQKLCDDAGIQHQLTTVYTPQQNGVCERKNRT 1968

Query: 367  LTSMCLSWLHTKNLPRKLWAAAVQSTCHVINRLPSWPGTEPSPFEALYHHTPSVSYFRVF 188
            +  M    L    +P   WA AV +  +++NRLP+      +PFEA +   PSVS+ +VF
Sbjct: 1969 VLDMARCLLFEAKMPNAFWAEAVNTAVYLLNRLPTNAVKGKTPFEAWFGQKPSVSHLKVF 2028

Query: 187  GLVCYAHVSKTNQTKLDPRARRCIFVGYDTHRKGWKCMDPETKKVDVSRDVVFDEVSSLQ 8
            G +CY  V K  +TKLD R+   +FVGY   +KG++  DP TKKV VSRDV F E SS +
Sbjct: 2029 GCLCYVLVPKERRTKLDRRSMPGVFVGYSNVKKGYRVFDPLTKKVVVSRDVKFSEASSWK 2088

Query: 7    ID 2
             D
Sbjct: 2089 WD 2090


>AAG60117.1 copia-type polyprotein, putative [Arabidopsis thaliana]
          Length = 1352

 Score =  270 bits (690), Expect = 6e-78
 Identities = 141/355 (39%), Positives = 213/355 (60%), Gaps = 3/355 (0%)
 Frame = -1

Query: 1078 NLASVSQIIDDGRYVLFGPKNVQILSNIKHIEADVLFTGRRKESLYLLSASDAYVE--KT 905
            N+ S+ Q+++ G  +     N+ I     ++   V  +   K  +++L+  +   +  K 
Sbjct: 403  NILSLGQLLEKGYDIRLKDNNLSIRDQESNLITKVPMS---KNRMFVLNIRNDIAQCLKM 459

Query: 904  SQNESATLWHNRLGHVGYQLLQKISTKKLLDGVPLFNEIHHDVVCPGCQYGKSHCLPFPN 725
               E + LWH R GH+ +  L+ +S K+++ G+P  N  H + VC GC  GK   + FP 
Sbjct: 460  CYKEESWLWHLRFGHLNFGGLELLSRKEMVRGLPCIN--HPNQVCEGCLLGKQFKMSFPK 517

Query: 724  -SKNRASAALQLVHSDLMGPTKTPSYSSFRYVMVLVDEFSRFTWVYFLENKSEAFSNFVK 548
             S +RA  +L+L+H+D+ GP K  S     Y ++ +D+FSR TWVYFL+ KSE F  F K
Sbjct: 518  ESSSRAQKSLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKK 577

Query: 547  FKEQVEKEFGLQIKCMRTDNGGEYMSDQFLNYCREHDIQRQMTFRETPQQNGVVERKLAY 368
            FK  VEKE GL IK MR+D GGE+ S +FL YC ++ I+RQ+T   +PQQNGV ERK   
Sbjct: 578  FKAHVEKESGLVIKTMRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRT 637

Query: 367  LTSMCLSWLHTKNLPRKLWAAAVQSTCHVINRLPSWPGTEPSPFEALYHHTPSVSYFRVF 188
            +  M  S L +K LP++LWA AV    +++NR P+   +  +P EA       VS+ RVF
Sbjct: 638  ILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKSGVSHLRVF 697

Query: 187  GLVCYAHVSKTNQTKLDPRARRCIFVGYDTHRKGWKCMDPETKKVDVSRDVVFDE 23
            G + +AHV    ++KLD ++ + IF+GYD + KG+K  +P+TKK  +SR++VFDE
Sbjct: 698  GSIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDE 752


>KYP66219.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1033

 Score =  267 bits (683), Expect = 8e-78
 Identities = 140/353 (39%), Positives = 208/353 (58%), Gaps = 1/353 (0%)
 Frame = -1

Query: 1078 NLASVSQIIDDGRYVLFGPKNVQILSNIKHIEADVLFTGRRKESLYLLSASDAYVEKTSQ 899
            N+ S+ Q+++ G  +     N+ I  N     A V  T  R   L + S     ++   +
Sbjct: 335  NILSLGQLLEKGYDIQLKNNNLSIRDNTSRFIAKVPMTRNRMFVLNIQSDGPQCLKMCYK 394

Query: 898  NESATLWHNRLGHVGYQLLQKISTKKLLDGVPLFNEIHHDVVCPGCQYGKSHCLPFPN-S 722
            ++S  LWH R GH+ ++ L+ +S K ++ G+P     H + VC GC  GK   L FP  S
Sbjct: 395  DQS-WLWHLRFGHLNFKGLELLSKKAMVRGLPCIT--HPNQVCEGCLLGKQFRLSFPKES 451

Query: 721  KNRASAALQLVHSDLMGPTKTPSYSSFRYVMVLVDEFSRFTWVYFLENKSEAFSNFVKFK 542
             +RA   L+L+H+D+ GP K  S     Y ++ +D+FSR TWVYFL+ KSE F NF KFK
Sbjct: 452  DSRAQKPLELIHTDVCGPIKPRSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFENFKKFK 511

Query: 541  EQVEKEFGLQIKCMRTDNGGEYMSDQFLNYCREHDIQRQMTFRETPQQNGVVERKLAYLT 362
              VEKE GL IK +R+D GGE+ S +F  YC ++ I+RQ+T   +PQQNGV ERK   + 
Sbjct: 512  AHVEKESGLLIKALRSDRGGEFTSKEFQKYCEDNGIRRQLTVPRSPQQNGVAERKNRTIL 571

Query: 361  SMCLSWLHTKNLPRKLWAAAVQSTCHVINRLPSWPGTEPSPFEALYHHTPSVSYFRVFGL 182
             M  S L +K LP++ WA AV    ++ NR P+   +  +P EA     P +S+ RVFG 
Sbjct: 572  EMARSMLKSKKLPKEFWAEAVACAVYLTNRSPTRSVSGKTPQEAWSGRKPGISHLRVFGS 631

Query: 181  VCYAHVSKTNQTKLDPRARRCIFVGYDTHRKGWKCMDPETKKVDVSRDVVFDE 23
            + + HV    ++KLD ++ + IF+GYD + KG+K  +P+++K  +SR+VVFDE
Sbjct: 632  IAHVHVPDEKRSKLDDKSEKYIFIGYDANSKGYKLYNPDSRKTIISRNVVFDE 684


>KYP69041.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1342

 Score =  267 bits (683), Expect = 6e-77
 Identities = 140/353 (39%), Positives = 208/353 (58%), Gaps = 1/353 (0%)
 Frame = -1

Query: 1078 NLASVSQIIDDGRYVLFGPKNVQILSNIKHIEADVLFTGRRKESLYLLSASDAYVEKTSQ 899
            N+ S+ Q+++ G  +     N+ I  N     A V  T  R   L + S     ++   +
Sbjct: 401  NILSLGQLLEKGYDIQLKNNNLSIRDNTSRFIAKVPMTRNRMFVLNIQSDGPQCLKMCYK 460

Query: 898  NESATLWHNRLGHVGYQLLQKISTKKLLDGVPLFNEIHHDVVCPGCQYGKSHCLPFPN-S 722
            ++S  LWH R GH+ ++ L+ +S K ++ G+P     H + VC GC  GK   L FP  S
Sbjct: 461  DQS-WLWHLRFGHLNFKGLELLSKKAMVRGLPCIT--HPNQVCEGCLLGKQFRLSFPKES 517

Query: 721  KNRASAALQLVHSDLMGPTKTPSYSSFRYVMVLVDEFSRFTWVYFLENKSEAFSNFVKFK 542
             +RA   L+L+H+D+ GP K  S     Y ++ +D+FSR TWVYFL+ KSE F NF KFK
Sbjct: 518  DSRAQKPLELIHTDVCGPIKPRSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFENFKKFK 577

Query: 541  EQVEKEFGLQIKCMRTDNGGEYMSDQFLNYCREHDIQRQMTFRETPQQNGVVERKLAYLT 362
              VEKE GL IK +R+D GGE+ S +F  YC ++ I+RQ+T   +PQQNGV ERK   + 
Sbjct: 578  AHVEKESGLLIKALRSDRGGEFTSKEFQKYCEDNGIRRQLTVPRSPQQNGVAERKNRTIL 637

Query: 361  SMCLSWLHTKNLPRKLWAAAVQSTCHVINRLPSWPGTEPSPFEALYHHTPSVSYFRVFGL 182
             M  S L +K LP++ WA AV    ++ NR P+   +  +P EA     P +S+ RVFG 
Sbjct: 638  EMARSMLKSKKLPKEFWAEAVACAVYLTNRSPTRSVSGKTPQEAWSGRKPGISHLRVFGS 697

Query: 181  VCYAHVSKTNQTKLDPRARRCIFVGYDTHRKGWKCMDPETKKVDVSRDVVFDE 23
            + + HV    ++KLD ++ + IF+GYD + KG+K  +P+++K  +SR+VVFDE
Sbjct: 698  IAHVHVPDEKRSKLDDKSEKYIFIGYDANSKGYKLYNPDSRKTIISRNVVFDE 750


>KYP44533.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1342

 Score =  267 bits (683), Expect = 6e-77
 Identities = 140/353 (39%), Positives = 208/353 (58%), Gaps = 1/353 (0%)
 Frame = -1

Query: 1078 NLASVSQIIDDGRYVLFGPKNVQILSNIKHIEADVLFTGRRKESLYLLSASDAYVEKTSQ 899
            N+ S+ Q+++ G  +     N+ I  N     A V  T  R   L + S     ++   +
Sbjct: 401  NILSLGQLLEKGYDIQLKNNNLSIRDNTSRFIAKVPMTRNRMFVLNIQSDGPQCLKMCYK 460

Query: 898  NESATLWHNRLGHVGYQLLQKISTKKLLDGVPLFNEIHHDVVCPGCQYGKSHCLPFPN-S 722
            ++S  LWH R GH+ ++ L+ +S K ++ G+P     H + VC GC  GK   L FP  S
Sbjct: 461  DQS-WLWHLRFGHLNFKGLELLSKKAMVRGLPCIT--HPNQVCEGCLLGKQFRLSFPKES 517

Query: 721  KNRASAALQLVHSDLMGPTKTPSYSSFRYVMVLVDEFSRFTWVYFLENKSEAFSNFVKFK 542
             +RA   L+L+H+D+ GP K  S     Y ++ +D+FSR TWVYFL+ KSE F NF KFK
Sbjct: 518  DSRAQKPLELIHTDVCGPIKPRSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFENFKKFK 577

Query: 541  EQVEKEFGLQIKCMRTDNGGEYMSDQFLNYCREHDIQRQMTFRETPQQNGVVERKLAYLT 362
              VEKE GL IK +R+D GGE+ S +F  YC ++ I+RQ+T   +PQQNGV ERK   + 
Sbjct: 578  AHVEKESGLLIKALRSDRGGEFTSKEFQKYCEDNGIRRQLTVPRSPQQNGVAERKNRTIL 637

Query: 361  SMCLSWLHTKNLPRKLWAAAVQSTCHVINRLPSWPGTEPSPFEALYHHTPSVSYFRVFGL 182
             M  S L +K LP++ WA AV    ++ NR P+   +  +P EA     P +S+ RVFG 
Sbjct: 638  EMARSMLKSKKLPKEFWAEAVACAVYLTNRSPTRSVSGKTPQEAWSGRKPGISHLRVFGS 697

Query: 181  VCYAHVSKTNQTKLDPRARRCIFVGYDTHRKGWKCMDPETKKVDVSRDVVFDE 23
            + + HV    ++KLD ++ + IF+GYD + KG+K  +P+++K  +SR+VVFDE
Sbjct: 698  IAHVHVPDEKRSKLDDKSEKYIFIGYDANSKGYKLYNPDSRKTIISRNVVFDE 750


>GAU51371.1 hypothetical protein TSUD_247260 [Trifolium subterraneum]
          Length = 1980

 Score =  264 bits (675), Expect = 8e-76
 Identities = 146/361 (40%), Positives = 209/361 (57%), Gaps = 9/361 (2%)
 Frame = -1

Query: 1078 NLASVSQIIDDGRYVLFGPKNVQILSNIKHIEADVLFTGRRKESLYLLSASDAYVEKTSQ 899
            NL SV Q+ + G  VL      +I  + K +      T  R   +++L +S   ++K ++
Sbjct: 362  NLLSVGQLQERGLAVLMQSNECRIYHHTKGLVFQTNMTANR---MFVLLSSTQSIKKENK 418

Query: 898  NES--------ATLWHNRLGHVGYQLLQKISTKKLLDGVPLFNEIHHDVVCPGCQYGKSH 743
             E         A LWH R GH+ Y+ L+ + TK ++ G+P F+    ++VC  C  GK H
Sbjct: 419  EECFQVTTDDVAHLWHRRFGHLSYKGLKTLQTKNMVRGLPSFSV--GEIVCTNCLKGKQH 476

Query: 742  C-LPFPNSKNRASAALQLVHSDLMGPTKTPSYSSFRYVMVLVDEFSRFTWVYFLENKSEA 566
              +    S  RAS  L+LVH+D+ GP    S  + RY +  +D++SR  WVYFL  KS+A
Sbjct: 477  RDVISRRSTWRASEKLELVHADICGPISPFSEGNKRYFICFIDDYSRKAWVYFLAYKSDA 536

Query: 565  FSNFVKFKEQVEKEFGLQIKCMRTDNGGEYMSDQFLNYCREHDIQRQMTFRETPQQNGVV 386
            F+ F  FK  VEKE GL IKC+RTD GGE+ S++F  YC+ + I+RQ+T   TPQQNGV 
Sbjct: 537  FTTFKLFKALVEKETGLSIKCLRTDRGGEFTSNEFKEYCKMNGIKRQLTVAYTPQQNGVA 596

Query: 385  ERKLAYLTSMCLSWLHTKNLPRKLWAAAVQSTCHVINRLPSWPGTEPSPFEALYHHTPSV 206
            ERK   + +M  S L  KN+PRK W  AV    +V+NR P+    E +P EA Y   PSV
Sbjct: 597  ERKNRTVMNMVRSLLVEKNVPRKFWVEAVNWAFYVLNRCPTSSVKEMTPVEAWYGMKPSV 656

Query: 205  SYFRVFGLVCYAHVSKTNQTKLDPRARRCIFVGYDTHRKGWKCMDPETKKVDVSRDVVFD 26
             + RVFG + YAHV    +TKL+ ++R C+  G     K ++  DP +K++ +SRDVVF+
Sbjct: 657  GHLRVFGCIAYAHVPDARRTKLEDKSRCCVLFGVSEESKAYRLYDPTSKRIIISRDVVFE 716

Query: 25   E 23
            E
Sbjct: 717  E 717


>KYP66220.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1331

 Score =  263 bits (671), Expect = 2e-75
 Identities = 138/353 (39%), Positives = 205/353 (58%), Gaps = 1/353 (0%)
 Frame = -1

Query: 1078 NLASVSQIIDDGRYVLFGPKNVQILSNIKHIEADVLFTGRRKESLYLLSASDAYVEKTSQ 899
            N+ S+ Q+++ G  +     N+ I  N       V     R   L + S     ++   +
Sbjct: 390  NILSLGQLLEKGYDIQLKNNNLSIRDNTSRFITKVPMMRNRMFVLNIQSDGPQCLKMCYK 449

Query: 898  NESATLWHNRLGHVGYQLLQKISTKKLLDGVPLFNEIHHDVVCPGCQYGKSHCLPFPN-S 722
            ++S  LWH R GH+ ++ L  +S K ++ G+P     H + VC GC  GK   L FP  S
Sbjct: 450  DQS-WLWHLRFGHLNFKGLDLLSKKAMVRGLPCIT--HPNQVCEGCLLGKQFRLSFPKES 506

Query: 721  KNRASAALQLVHSDLMGPTKTPSYSSFRYVMVLVDEFSRFTWVYFLENKSEAFSNFVKFK 542
             +RA   L+L+H+D+ GP K  S     Y ++ +D+FSR TWVYFL+ KSE F NF KFK
Sbjct: 507  DSRAQKPLELIHTDVCGPIKPRSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFENFKKFK 566

Query: 541  EQVEKEFGLQIKCMRTDNGGEYMSDQFLNYCREHDIQRQMTFRETPQQNGVVERKLAYLT 362
              VEKE GL IK +R+D GGE+ S +F  YC ++ I+RQ+T   +PQQNGV ERK   + 
Sbjct: 567  AHVEKESGLLIKALRSDRGGEFTSKEFQKYCEDNGIRRQLTVPRSPQQNGVAERKNRTIL 626

Query: 361  SMCLSWLHTKNLPRKLWAAAVQSTCHVINRLPSWPGTEPSPFEALYHHTPSVSYFRVFGL 182
             M  S L +K LP++ WA AV    ++ NR P+   +  +P EA     P +S+ RVFG 
Sbjct: 627  EMARSMLKSKKLPKEFWAEAVACAVYLTNRSPTRSVSGKTPQEAWSGRKPGISHLRVFGS 686

Query: 181  VCYAHVSKTNQTKLDPRARRCIFVGYDTHRKGWKCMDPETKKVDVSRDVVFDE 23
            + + HV    ++KLD ++ + IF+GYD + KG+K  +P+++K  +SR+VVFDE
Sbjct: 687  IAHVHVPDEKRSKLDDKSEKYIFIGYDANSKGYKLYNPDSRKTIISRNVVFDE 739


>KYP67736.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 259

 Score =  241 bits (614), Expect = 9e-75
 Identities = 122/267 (45%), Positives = 168/267 (62%)
 Frame = -1

Query: 964 GRRKESLYLLSASDAYVEKTSQNESATLWHNRLGHVGYQLLQKISTKKLLDGVPLFNEIH 785
           GRR ES+Y++SA +AYV K  +NE+A LWH RLGHV Y  L+ +  + +L G+P   E+ 
Sbjct: 3   GRRLESVYVMSAQEAYVNKARKNETADLWHARLGHVSYNRLKAMMKQSMLRGLPNL-EMR 61

Query: 784 HDVVCPGCQYGKSHCLPFPNSKNRASAALQLVHSDLMGPTKTPSYSSFRYVMVLVDEFSR 605
            +VVC GCQYGK+H LP+  SK +A A L+LVHSD+ GP K  S S  +Y++ ++D++SR
Sbjct: 62  ENVVCVGCQYGKAHELPYEESKYKAKAPLELVHSDVFGPVKQLSISKNKYMITIIDDYSR 121

Query: 604 FTWVYFLENKSEAFSNFVKFKEQVEKEFGLQIKCMRTDNGGEYMSDQFLNYCREHDIQRQ 425
           + WV F++ KSEA   F++FKE++EKE G  I+C+RTDNGGEY S +F  Y ++  I+RQ
Sbjct: 122 YVWVDFMKEKSEALKKFIEFKEKIEKEVGSMIRCLRTDNGGEYTSKEFNQYLQKCGIRRQ 181

Query: 424 MTFRETPQQNGVVERKLAYLTSMCLSWLHTKNLPRKLWAAAVQSTCHVINRLPSWPGTEP 245
           +T   TPQQNG+ ERK  +L    L ++                                
Sbjct: 182 LTCPNTPQQNGIAERKNRHLPRQELGFV-------------------------------- 209

Query: 244 SPFEALYHHTPSVSYFRVFGLVCYAHV 164
           SP+E L++  PSVSYFRVFG VCYA V
Sbjct: 210 SPYEKLWNTKPSVSYFRVFGCVCYAFV 236