BLASTX nr result

ID: Panax25_contig00027281 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00027281
         (1016 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KZN04862.1 hypothetical protein DCAR_005699 [Daucus carota subsp...    81   3e-13
XP_017232409.1 PREDICTED: CDT1-like protein a, chloroplastic [Da...    81   3e-13
XP_019165123.1 PREDICTED: CDT1-like protein a, chloroplastic [Ip...    71   5e-10
XP_019234505.1 PREDICTED: CDT1-like protein a, chloroplastic [Ni...    65   4e-08
XP_016489510.1 PREDICTED: CDT1-like protein a, chloroplastic [Ni...    65   8e-08
XP_009628308.1 PREDICTED: CDT1-like protein a, chloroplastic [Ni...    65   8e-08
XP_009763179.1 PREDICTED: CDT1-like protein a, chloroplastic [Ni...    64   1e-07
XP_019234513.1 PREDICTED: CDT1-like protein a, chloroplastic [Ni...    63   3e-07
CDP03731.1 unnamed protein product [Coffea canephora]                  63   3e-07
XP_016489512.1 PREDICTED: CDT1-like protein a, chloroplastic [Ni...    59   4e-06
XP_009628309.1 PREDICTED: CDT1-like protein a, chloroplastic [Ni...    59   6e-06

>KZN04862.1 hypothetical protein DCAR_005699 [Daucus carota subsp. sativus]
          Length = 586

 Score = 81.3 bits (199), Expect = 3e-13
 Identities = 51/107 (47%), Positives = 58/107 (54%)
 Frame = +2

Query: 194 FSQKKILHXXXXXXXXXXXXXVKASDQSPWSSKTPEKPLNPPHWLRNRGTALSLKEDRQF 373
           F  KKIL+             VKA  +SPWSSKTPEK +NP   LRNRG ALSLKE RQ 
Sbjct: 8   FKSKKILNSVSKTPSLPEA--VKAPIESPWSSKTPEKSVNPTRRLRNRGAALSLKEVRQC 65

Query: 374 AKTLQVHDPCNRSDPLCXXXXXXXXXXXXTPFIKAKRSDSSIKLPEK 514
           AK LQ  DP  R DP+             +P  K KR   S+KLPE+
Sbjct: 66  AKKLQNRDPKTRPDPVTASDEQISSEPVQSPVAKPKR---SVKLPEQ 109


>XP_017232409.1 PREDICTED: CDT1-like protein a, chloroplastic [Daucus carota subsp.
           sativus]
          Length = 629

 Score = 81.3 bits (199), Expect = 3e-13
 Identities = 51/107 (47%), Positives = 58/107 (54%)
 Frame = +2

Query: 194 FSQKKILHXXXXXXXXXXXXXVKASDQSPWSSKTPEKPLNPPHWLRNRGTALSLKEDRQF 373
           F  KKIL+             VKA  +SPWSSKTPEK +NP   LRNRG ALSLKE RQ 
Sbjct: 14  FKSKKILNSVSKTPSLPEA--VKAPIESPWSSKTPEKSVNPTRRLRNRGAALSLKEVRQC 71

Query: 374 AKTLQVHDPCNRSDPLCXXXXXXXXXXXXTPFIKAKRSDSSIKLPEK 514
           AK LQ  DP  R DP+             +P  K KR   S+KLPE+
Sbjct: 72  AKKLQNRDPKTRPDPVTASDEQISSEPVQSPVAKPKR---SVKLPEQ 115


>XP_019165123.1 PREDICTED: CDT1-like protein a, chloroplastic [Ipomoea nil]
           XP_019165128.1 PREDICTED: CDT1-like protein a,
           chloroplastic [Ipomoea nil]
          Length = 546

 Score = 71.2 bits (173), Expect = 5e-10
 Identities = 44/109 (40%), Positives = 56/109 (51%), Gaps = 2/109 (1%)
 Frame = +2

Query: 194 FSQKKILHXXXXXXXXXXXXXVKASDQSPWSSKTPEKPLNPPHWLRNRGTALSLKEDRQF 373
           F  KK+LH                +D+ PWSSKTPEKP+N P   RN  +ALSLK+ RQ 
Sbjct: 12  FKTKKVLHSSSKPNPSPEIK--SPADRDPWSSKTPEKPVNAPRRSRNGNSALSLKQVRQA 69

Query: 374 AKTLQVHDP--CNRSDPLCXXXXXXXXXXXXTPFIKAKRSDSSIKLPEK 514
           A  L+  DP   +++DPL             +P  K K+SD   KLPEK
Sbjct: 70  ALKLRKSDPERPSQADPLLSSAAGQIGSQPESPPAKPKKSDGPAKLPEK 118


>XP_019234505.1 PREDICTED: CDT1-like protein a, chloroplastic [Nicotiana attenuata]
           OIT06911.1 cdt1-like protein a, chloroplastic [Nicotiana
           attenuata]
          Length = 586

 Score = 65.5 bits (158), Expect = 4e-08
 Identities = 38/84 (45%), Positives = 47/84 (55%)
 Frame = +2

Query: 263 ASDQSPWSSKTPEKPLNPPHWLRNRGTALSLKEDRQFAKTLQVHDPCNRSDPLCXXXXXX 442
           A    PWSSKTPEKP+ PP   RNRG ALSLKE RQ  + L+  DP   + P+       
Sbjct: 30  APSLDPWSSKTPEKPIIPPRRTRNRGAALSLKEVRQATQRLRKPDP---NHPIA--QAGA 84

Query: 443 XXXXXXTPFIKAKRSDSSIKLPEK 514
                 +P +KAK+    +KLPEK
Sbjct: 85  SLSSVKSPAVKAKKPIDPVKLPEK 108


>XP_016489510.1 PREDICTED: CDT1-like protein a, chloroplastic [Nicotiana tabacum]
          Length = 587

 Score = 64.7 bits (156), Expect = 8e-08
 Identities = 37/84 (44%), Positives = 48/84 (57%)
 Frame = +2

Query: 263 ASDQSPWSSKTPEKPLNPPHWLRNRGTALSLKEDRQFAKTLQVHDPCNRSDPLCXXXXXX 442
           A    PWSSKTPEKP+ PP   RNR  ALSLKE R+ A+ L+  DP   + P+       
Sbjct: 30  APSLDPWSSKTPEKPIIPPRRTRNRSAALSLKEVREAAQKLRKRDP---THPI--TQADA 84

Query: 443 XXXXXXTPFIKAKRSDSSIKLPEK 514
                 +P +KAK++   +KLPEK
Sbjct: 85  SLSSGKSPAVKAKKAVDPVKLPEK 108


>XP_009628308.1 PREDICTED: CDT1-like protein a, chloroplastic [Nicotiana
           tomentosiformis]
          Length = 587

 Score = 64.7 bits (156), Expect = 8e-08
 Identities = 37/84 (44%), Positives = 48/84 (57%)
 Frame = +2

Query: 263 ASDQSPWSSKTPEKPLNPPHWLRNRGTALSLKEDRQFAKTLQVHDPCNRSDPLCXXXXXX 442
           A    PWSSKTPEKP+ PP   RNR  ALSLKE R+ A+ L+  DP   + P+       
Sbjct: 30  APSLDPWSSKTPEKPIIPPRRTRNRSAALSLKEVREAAQKLRKRDP---THPI--TQADA 84

Query: 443 XXXXXXTPFIKAKRSDSSIKLPEK 514
                 +P +KAK++   +KLPEK
Sbjct: 85  SLSSGKSPAVKAKKAVDPVKLPEK 108


>XP_009763179.1 PREDICTED: CDT1-like protein a, chloroplastic [Nicotiana
           sylvestris]
          Length = 586

 Score = 63.9 bits (154), Expect = 1e-07
 Identities = 37/84 (44%), Positives = 48/84 (57%)
 Frame = +2

Query: 263 ASDQSPWSSKTPEKPLNPPHWLRNRGTALSLKEDRQFAKTLQVHDPCNRSDPLCXXXXXX 442
           A    PWSSKTPEKP+ PP   RNR  ALSLKE R+ A+ L+  DP   + P+       
Sbjct: 30  APSLDPWSSKTPEKPIIPPRRTRNRSAALSLKEVREAAQKLRKPDP---THPI--SQADA 84

Query: 443 XXXXXXTPFIKAKRSDSSIKLPEK 514
                 +P +KAK++   +KLPEK
Sbjct: 85  SLSSGKSPAVKAKKAVDPVKLPEK 108


>XP_019234513.1 PREDICTED: CDT1-like protein a, chloroplastic [Nicotiana attenuata]
           OIT06912.1 cdt1-like protein a, chloroplastic [Nicotiana
           attenuata]
          Length = 586

 Score = 62.8 bits (151), Expect = 3e-07
 Identities = 36/84 (42%), Positives = 45/84 (53%)
 Frame = +2

Query: 263 ASDQSPWSSKTPEKPLNPPHWLRNRGTALSLKEDRQFAKTLQVHDPCNRSDPLCXXXXXX 442
           A    PWSSKTPEKP+ PP   RNR  ALSLKE R+ A+ L+  DP   +          
Sbjct: 30  APSLDPWSSKTPEKPIIPPRRTRNRSAALSLKEVREAAQKLRKPDPTRPT-----TRTDS 84

Query: 443 XXXXXXTPFIKAKRSDSSIKLPEK 514
                 +P +KAK+    +KLPEK
Sbjct: 85  SLSSGKSPAVKAKKVVDPVKLPEK 108


>CDP03731.1 unnamed protein product [Coffea canephora]
          Length = 598

 Score = 62.8 bits (151), Expect = 3e-07
 Identities = 48/114 (42%), Positives = 53/114 (46%), Gaps = 6/114 (5%)
 Frame = +2

Query: 191 LFSQKKILHXXXXXXXXXXXXXVKASDQ--SPWSSKTPEKPLNPPHWLRNRGTALSLKED 364
           LF  KKILH                 D   SPWSSKTPEKP+ PP   RN   ALSLKE 
Sbjct: 12  LFKSKKILHSSTPTPSDKNPQPHPHPDPNPSPWSSKTPEKPIVPPRRTRNSAAALSLKEV 71

Query: 365 RQFAKTLQ---VHDPCNRSDPLC-XXXXXXXXXXXXTPFIKAKRSDSSIKLPEK 514
           R  AK LQ   +H    R DPL              +   K  + D+SIKLPEK
Sbjct: 72  RLAAKNLQEPALHQK-PRPDPLMPAALKERIPSWPESSPAKVNKPDNSIKLPEK 124


>XP_016489512.1 PREDICTED: CDT1-like protein a, chloroplastic [Nicotiana tabacum]
          Length = 586

 Score = 59.3 bits (142), Expect = 4e-06
 Identities = 36/84 (42%), Positives = 46/84 (54%)
 Frame = +2

Query: 263 ASDQSPWSSKTPEKPLNPPHWLRNRGTALSLKEDRQFAKTLQVHDPCNRSDPLCXXXXXX 442
           A    PWSSKTPEK + PP   RNR  ALSLKE R+ A+ L+  DP   + P+       
Sbjct: 30  APSLDPWSSKTPEKHIIPPRRTRNRSAALSLKEVREAAQKLRKPDP---THPI--TQADA 84

Query: 443 XXXXXXTPFIKAKRSDSSIKLPEK 514
                 +P +KAK+    +KLPEK
Sbjct: 85  SLSSGKSPAVKAKKVVDPVKLPEK 108


>XP_009628309.1 PREDICTED: CDT1-like protein a, chloroplastic [Nicotiana
           tomentosiformis]
          Length = 586

 Score = 58.9 bits (141), Expect = 6e-06
 Identities = 36/84 (42%), Positives = 46/84 (54%)
 Frame = +2

Query: 263 ASDQSPWSSKTPEKPLNPPHWLRNRGTALSLKEDRQFAKTLQVHDPCNRSDPLCXXXXXX 442
           A    PWSSKTPEK + PP   RNR  ALSLKE R+ A+ L+  DP   + P+       
Sbjct: 30  APSLDPWSSKTPEKHIIPPRRTRNRSAALSLKEVREAAQKLRKLDP---THPI--TQADA 84

Query: 443 XXXXXXTPFIKAKRSDSSIKLPEK 514
                 +P +KAK+    +KLPEK
Sbjct: 85  SLSSGKSPAVKAKKVVDPVKLPEK 108


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