BLASTX nr result
ID: Panax25_contig00027207
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax25_contig00027207
(451 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_007051490.2 PREDICTED: DNA-directed RNA polymerase III subuni... 104 3e-26
EOX95647.1 DNA-directed RNA polymerase subunit [Theobroma cacao] 104 3e-26
XP_016682249.1 PREDICTED: DNA-directed RNA polymerase III subuni... 103 5e-26
XP_016681767.1 PREDICTED: DNA-directed RNA polymerase III subuni... 103 5e-26
XP_012475064.1 PREDICTED: DNA-directed RNA polymerase III subuni... 103 5e-26
XP_019193012.1 PREDICTED: DNA-directed RNA polymerase III subuni... 103 6e-26
CDP11663.1 unnamed protein product [Coffea canephora] 103 6e-26
CDP17655.1 unnamed protein product [Coffea canephora] 103 6e-26
KVH97302.1 DNA-directed RNA polymerase, M/15kDa subunit [Cynara ... 103 9e-26
XP_002267122.1 PREDICTED: DNA-directed RNA polymerase III subuni... 103 9e-26
CBI40586.3 unnamed protein product, partial [Vitis vinifera] 105 1e-25
OMP08656.1 Zinc finger, TFIIS-type [Corchorus olitorius] 102 2e-25
XP_012440347.1 PREDICTED: DNA-directed RNA polymerase III subuni... 102 2e-25
XP_010057529.1 PREDICTED: DNA-directed RNA polymerase III subuni... 101 5e-25
XP_018846749.1 PREDICTED: DNA-directed RNA polymerase III subuni... 100 8e-25
OMO64252.1 Zinc finger, TFIIS-type [Corchorus capsularis] 100 1e-24
OAY62126.1 hypothetical protein MANES_01G243500 [Manihot esculenta] 99 4e-24
XP_010100702.1 DNA-directed RNA polymerase subunit M [Morus nota... 99 6e-24
XP_002523512.1 PREDICTED: DNA-directed RNA polymerase III subuni... 97 2e-23
XP_010057534.1 PREDICTED: DNA-directed RNA polymerase III subuni... 97 3e-23
>XP_007051490.2 PREDICTED: DNA-directed RNA polymerase III subunit RPC10 [Theobroma
cacao]
Length = 112
Score = 104 bits (259), Expect = 3e-26
Identities = 43/54 (79%), Positives = 51/54 (94%)
Frame = +2
Query: 290 MEFCPTCGMLLQYELPHMGRAARFSCPTCPYVCQIESKVKIKRKQHLVKKQIDP 451
MEFCPTCG +LQ+ELPHMGR +RF CPTCPYVCQ+E+KVKIKR+QHLVKK+I+P
Sbjct: 1 MEFCPTCGNMLQFELPHMGRPSRFVCPTCPYVCQLENKVKIKRRQHLVKKEIEP 54
>EOX95647.1 DNA-directed RNA polymerase subunit [Theobroma cacao]
Length = 112
Score = 104 bits (259), Expect = 3e-26
Identities = 43/54 (79%), Positives = 51/54 (94%)
Frame = +2
Query: 290 MEFCPTCGMLLQYELPHMGRAARFSCPTCPYVCQIESKVKIKRKQHLVKKQIDP 451
MEFCPTCG +LQ+ELPHMGR +RF CPTCPYVCQ+E+KVKIKR+QHLVKK+I+P
Sbjct: 1 MEFCPTCGNMLQFELPHMGRPSRFVCPTCPYVCQLENKVKIKRRQHLVKKEIEP 54
>XP_016682249.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC10-like
[Gossypium hirsutum]
Length = 110
Score = 103 bits (258), Expect = 5e-26
Identities = 43/54 (79%), Positives = 50/54 (92%)
Frame = +2
Query: 290 MEFCPTCGMLLQYELPHMGRAARFSCPTCPYVCQIESKVKIKRKQHLVKKQIDP 451
MEFCPTCG +LQYELPHMGR +RF CPTCPYVC +E+KVKIKR+QHLVKK+I+P
Sbjct: 1 MEFCPTCGNMLQYELPHMGRPSRFFCPTCPYVCHLENKVKIKRRQHLVKKEIEP 54
>XP_016681767.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC10-like
[Gossypium hirsutum]
Length = 110
Score = 103 bits (258), Expect = 5e-26
Identities = 43/54 (79%), Positives = 50/54 (92%)
Frame = +2
Query: 290 MEFCPTCGMLLQYELPHMGRAARFSCPTCPYVCQIESKVKIKRKQHLVKKQIDP 451
MEFCPTCG +LQYELPHMGR +RF CPTCPYVC +E+KVKIKR+QHLVKK+I+P
Sbjct: 1 MEFCPTCGNMLQYELPHMGRPSRFFCPTCPYVCHLENKVKIKRRQHLVKKEIEP 54
>XP_012475064.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC10-like
[Gossypium raimondii] XP_017625705.1 PREDICTED:
DNA-directed RNA polymerase III subunit RPC10-like
[Gossypium arboreum] KHG04769.1 DNA-directed RNA
polymerase III subunit RPC10 [Gossypium arboreum]
KJB24546.1 hypothetical protein B456_004G150300
[Gossypium raimondii]
Length = 110
Score = 103 bits (258), Expect = 5e-26
Identities = 43/54 (79%), Positives = 50/54 (92%)
Frame = +2
Query: 290 MEFCPTCGMLLQYELPHMGRAARFSCPTCPYVCQIESKVKIKRKQHLVKKQIDP 451
MEFCPTCG +LQYELPHMGR +RF CPTCPYVC +E+KVKIKR+QHLVKK+I+P
Sbjct: 1 MEFCPTCGNMLQYELPHMGRPSRFFCPTCPYVCHLENKVKIKRRQHLVKKEIEP 54
>XP_019193012.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC10-like
isoform X1 [Ipomoea nil] XP_019193013.1 PREDICTED:
DNA-directed RNA polymerase III subunit RPC10-like
isoform X1 [Ipomoea nil] XP_019193014.1 PREDICTED:
DNA-directed RNA polymerase III subunit RPC10-like
isoform X1 [Ipomoea nil]
Length = 110
Score = 103 bits (257), Expect = 6e-26
Identities = 43/54 (79%), Positives = 50/54 (92%)
Frame = +2
Query: 290 MEFCPTCGMLLQYELPHMGRAARFSCPTCPYVCQIESKVKIKRKQHLVKKQIDP 451
MEFCPTCGMLLQYELPHM R+ARF CP CPYVCQIE ++KIKR+QHLV+K++DP
Sbjct: 1 MEFCPTCGMLLQYELPHMDRSARFYCPGCPYVCQIEPRIKIKRRQHLVRKKLDP 54
>CDP11663.1 unnamed protein product [Coffea canephora]
Length = 110
Score = 103 bits (257), Expect = 6e-26
Identities = 45/54 (83%), Positives = 48/54 (88%)
Frame = +2
Query: 290 MEFCPTCGMLLQYELPHMGRAARFSCPTCPYVCQIESKVKIKRKQHLVKKQIDP 451
MEFCPTCGMLLQYELPHM R ARF CPTCPYVC I+SKVKIKRK LVKK++DP
Sbjct: 1 MEFCPTCGMLLQYELPHMDRPARFFCPTCPYVCHIDSKVKIKRKHRLVKKELDP 54
>CDP17655.1 unnamed protein product [Coffea canephora]
Length = 110
Score = 103 bits (257), Expect = 6e-26
Identities = 45/54 (83%), Positives = 48/54 (88%)
Frame = +2
Query: 290 MEFCPTCGMLLQYELPHMGRAARFSCPTCPYVCQIESKVKIKRKQHLVKKQIDP 451
MEFCPTCGMLLQYELPHM R ARF CPTCPYVC I+SKVKIKRK LVKK++DP
Sbjct: 1 MEFCPTCGMLLQYELPHMDRPARFFCPTCPYVCHIDSKVKIKRKHRLVKKELDP 54
>KVH97302.1 DNA-directed RNA polymerase, M/15kDa subunit [Cynara cardunculus
var. scolymus]
Length = 110
Score = 103 bits (256), Expect = 9e-26
Identities = 46/54 (85%), Positives = 49/54 (90%)
Frame = +2
Query: 290 MEFCPTCGMLLQYELPHMGRAARFSCPTCPYVCQIESKVKIKRKQHLVKKQIDP 451
MEFCPTCGMLL+YELPHM R ARF CPTCPYV QIE+KVKIKRKQ LVKK+IDP
Sbjct: 1 MEFCPTCGMLLKYELPHMSRPARFFCPTCPYVIQIETKVKIKRKQRLVKKEIDP 54
>XP_002267122.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC10 [Vitis
vinifera] XP_010661974.1 PREDICTED: DNA-directed RNA
polymerase III subunit RPC10 [Vitis vinifera]
XP_010661975.1 PREDICTED: DNA-directed RNA polymerase
III subunit RPC10 [Vitis vinifera] XP_019081215.1
PREDICTED: DNA-directed RNA polymerase III subunit RPC10
[Vitis vinifera]
Length = 111
Score = 103 bits (256), Expect = 9e-26
Identities = 45/54 (83%), Positives = 48/54 (88%)
Frame = +2
Query: 290 MEFCPTCGMLLQYELPHMGRAARFSCPTCPYVCQIESKVKIKRKQHLVKKQIDP 451
MEFCPTCG LQYELPHMGR ARF CPTCPYVC IE+KVKIKRKQ LVKK+I+P
Sbjct: 1 MEFCPTCGNFLQYELPHMGRPARFFCPTCPYVCHIETKVKIKRKQRLVKKEIEP 54
>CBI40586.3 unnamed protein product, partial [Vitis vinifera]
Length = 175
Score = 105 bits (261), Expect = 1e-25
Identities = 46/55 (83%), Positives = 49/55 (89%)
Frame = +2
Query: 287 QMEFCPTCGMLLQYELPHMGRAARFSCPTCPYVCQIESKVKIKRKQHLVKKQIDP 451
QMEFCPTCG LQYELPHMGR ARF CPTCPYVC IE+KVKIKRKQ LVKK+I+P
Sbjct: 64 QMEFCPTCGNFLQYELPHMGRPARFFCPTCPYVCHIETKVKIKRKQRLVKKEIEP 118
>OMP08656.1 Zinc finger, TFIIS-type [Corchorus olitorius]
Length = 110
Score = 102 bits (254), Expect = 2e-25
Identities = 44/54 (81%), Positives = 49/54 (90%)
Frame = +2
Query: 290 MEFCPTCGMLLQYELPHMGRAARFSCPTCPYVCQIESKVKIKRKQHLVKKQIDP 451
MEFCPTCG LLQYELPHMGR ARF CP+CPYVC +ESKVKIKR+Q LVKK+I+P
Sbjct: 1 MEFCPTCGNLLQYELPHMGRPARFFCPSCPYVCHLESKVKIKRRQRLVKKEIEP 54
>XP_012440347.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC10-like
[Gossypium raimondii] XP_012440348.1 PREDICTED:
DNA-directed RNA polymerase III subunit RPC10-like
[Gossypium raimondii] XP_016718234.1 PREDICTED:
DNA-directed RNA polymerase III subunit RPC10-like
[Gossypium hirsutum] XP_016733626.1 PREDICTED:
DNA-directed RNA polymerase III subunit RPC10-like
[Gossypium hirsutum] XP_016733628.1 PREDICTED:
DNA-directed RNA polymerase III subunit RPC10-like
[Gossypium hirsutum] XP_017636377.1 PREDICTED:
DNA-directed RNA polymerase III subunit RPC10-like
[Gossypium arboreum] KHG27756.1 DNA-directed RNA
polymerase III subunit RPC10 [Gossypium arboreum]
KJB53052.1 hypothetical protein B456_008G290700
[Gossypium raimondii] KJB53053.1 hypothetical protein
B456_008G290700 [Gossypium raimondii]
Length = 110
Score = 102 bits (254), Expect = 2e-25
Identities = 42/54 (77%), Positives = 50/54 (92%)
Frame = +2
Query: 290 MEFCPTCGMLLQYELPHMGRAARFSCPTCPYVCQIESKVKIKRKQHLVKKQIDP 451
MEFCP+CG +LQYELPHMGR +RF CPTCPYVC +E+KVKIKR+QHLVKK+I+P
Sbjct: 1 MEFCPSCGNMLQYELPHMGRPSRFFCPTCPYVCHLENKVKIKRRQHLVKKEIEP 54
>XP_010057529.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC10
[Eucalyptus grandis] XP_010057536.1 PREDICTED:
DNA-directed RNA polymerase III subunit RPC10
[Eucalyptus grandis] XP_010041023.1 PREDICTED:
DNA-directed RNA polymerase III subunit RPC10
[Eucalyptus grandis] XP_018730219.1 PREDICTED:
DNA-directed RNA polymerase III subunit RPC10
[Eucalyptus grandis] XP_018730220.1 PREDICTED:
DNA-directed RNA polymerase III subunit RPC10
[Eucalyptus grandis] XP_018722459.1 PREDICTED:
DNA-directed RNA polymerase III subunit RPC10
[Eucalyptus grandis] KCW44709.1 hypothetical protein
EUGRSUZ_L01751 [Eucalyptus grandis] KCW74714.1
hypothetical protein EUGRSUZ_E03439 [Eucalyptus grandis]
KCW74716.1 hypothetical protein EUGRSUZ_E03441
[Eucalyptus grandis] KCW74717.1 hypothetical protein
EUGRSUZ_E03442 [Eucalyptus grandis]
Length = 112
Score = 101 bits (251), Expect = 5e-25
Identities = 44/54 (81%), Positives = 48/54 (88%)
Frame = +2
Query: 290 MEFCPTCGMLLQYELPHMGRAARFSCPTCPYVCQIESKVKIKRKQHLVKKQIDP 451
MEFCPTCG LLQYELPH R ARF CPTCPYVC IE+KVKIKRKQHLV+K++DP
Sbjct: 1 MEFCPTCGNLLQYELPHRERPARFFCPTCPYVCNIETKVKIKRKQHLVRKKMDP 54
>XP_018846749.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC10-like
[Juglans regia]
Length = 111
Score = 100 bits (250), Expect = 8e-25
Identities = 42/54 (77%), Positives = 49/54 (90%)
Frame = +2
Query: 290 MEFCPTCGMLLQYELPHMGRAARFSCPTCPYVCQIESKVKIKRKQHLVKKQIDP 451
MEFCPTCG +LQYELPHMGR +RF CPTCPYVC IE+KVKIK+KQ LVKK+++P
Sbjct: 1 MEFCPTCGNMLQYELPHMGRPSRFFCPTCPYVCHIETKVKIKKKQRLVKKELEP 54
>OMO64252.1 Zinc finger, TFIIS-type [Corchorus capsularis]
Length = 110
Score = 100 bits (249), Expect = 1e-24
Identities = 42/54 (77%), Positives = 49/54 (90%)
Frame = +2
Query: 290 MEFCPTCGMLLQYELPHMGRAARFSCPTCPYVCQIESKVKIKRKQHLVKKQIDP 451
MEFCPTCG +LQYELPHMGR +RF CP+CPYVC +ESKVKIKR+Q LVKK+I+P
Sbjct: 1 MEFCPTCGNMLQYELPHMGRPSRFFCPSCPYVCHLESKVKIKRRQRLVKKEIEP 54
>OAY62126.1 hypothetical protein MANES_01G243500 [Manihot esculenta]
Length = 112
Score = 99.0 bits (245), Expect = 4e-24
Identities = 41/54 (75%), Positives = 49/54 (90%)
Frame = +2
Query: 290 MEFCPTCGMLLQYELPHMGRAARFSCPTCPYVCQIESKVKIKRKQHLVKKQIDP 451
MEFCPTCG+LL+YELPHMG+ +RF CP CPYVC +ES+VKIKRKQ LVKK+I+P
Sbjct: 1 MEFCPTCGLLLRYELPHMGQPSRFYCPACPYVCSMESRVKIKRKQQLVKKEIEP 54
>XP_010100702.1 DNA-directed RNA polymerase subunit M [Morus notabilis] EXB83864.1
DNA-directed RNA polymerase subunit M [Morus notabilis]
Length = 110
Score = 98.6 bits (244), Expect = 6e-24
Identities = 41/54 (75%), Positives = 49/54 (90%)
Frame = +2
Query: 290 MEFCPTCGMLLQYELPHMGRAARFSCPTCPYVCQIESKVKIKRKQHLVKKQIDP 451
MEFCPTCG++L YELP GR+ARF CPTCPYVC +ES+VKIKR+QHLVKK+I+P
Sbjct: 1 MEFCPTCGVMLLYELPDRGRSARFYCPTCPYVCSLESRVKIKRRQHLVKKEIEP 54
>XP_002523512.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC10 [Ricinus
communis] EEF38851.1 DNA-directed RNA polymerase III,
putative [Ricinus communis]
Length = 112
Score = 97.4 bits (241), Expect = 2e-23
Identities = 41/54 (75%), Positives = 50/54 (92%)
Frame = +2
Query: 290 MEFCPTCGMLLQYELPHMGRAARFSCPTCPYVCQIESKVKIKRKQHLVKKQIDP 451
MEFCPTCG+LL+YELP+MG++ARF C TCPYVC IES+VKIKRKQ L+KK+I+P
Sbjct: 1 MEFCPTCGVLLRYELPNMGQSARFYCSTCPYVCSIESRVKIKRKQQLIKKEIEP 54
>XP_010057534.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC10-like
isoform X1 [Eucalyptus grandis] XP_010057535.1
PREDICTED: DNA-directed RNA polymerase III subunit
RPC10-like isoform X2 [Eucalyptus grandis]
XP_018730217.1 PREDICTED: DNA-directed RNA polymerase
III subunit RPC10-like isoform X1 [Eucalyptus grandis]
XP_018730218.1 PREDICTED: DNA-directed RNA polymerase
III subunit RPC10-like isoform X1 [Eucalyptus grandis]
Length = 131
Score = 97.4 bits (241), Expect = 3e-23
Identities = 42/52 (80%), Positives = 46/52 (88%)
Frame = +2
Query: 296 FCPTCGMLLQYELPHMGRAARFSCPTCPYVCQIESKVKIKRKQHLVKKQIDP 451
FCPTCG LLQYELPH R ARF CPTCPYVC IESKVKIKRKQHLV+K+++P
Sbjct: 22 FCPTCGNLLQYELPHKDRPARFFCPTCPYVCNIESKVKIKRKQHLVRKKMEP 73