BLASTX nr result
ID: Panax25_contig00027050
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax25_contig00027050
(443 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_017249352.1 PREDICTED: transcription initiation factor TFIID ... 101 2e-22
OMP03158.1 putative transcription initiation factor tfiid, parti... 90 1e-19
OMO64596.1 TATA box binding protein associated factor (TAF) [Cor... 87 3e-17
OAY33035.1 hypothetical protein MANES_13G064400, partial [Maniho... 85 1e-16
OAY33036.1 hypothetical protein MANES_13G064400, partial [Maniho... 85 1e-16
XP_015881514.1 PREDICTED: transcription initiation factor TFIID ... 85 2e-16
XP_015881513.1 PREDICTED: transcription initiation factor TFIID ... 85 2e-16
XP_008229836.1 PREDICTED: transcription initiation factor TFIID ... 84 3e-16
GAV62413.1 TAF domain-containing protein/DUF1546 domain-containi... 84 6e-16
XP_011467758.1 PREDICTED: transcription initiation factor TFIID ... 83 1e-15
XP_004304060.1 PREDICTED: transcription initiation factor TFIID ... 83 1e-15
KJB08682.1 hypothetical protein B456_001G097400 [Gossypium raimo... 82 2e-15
XP_016744984.1 PREDICTED: transcription initiation factor TFIID ... 82 2e-15
XP_012472919.1 PREDICTED: transcription initiation factor TFIID ... 82 2e-15
ACJ85793.1 unknown [Medicago truncatula] AFK38960.1 unknown [Med... 81 2e-15
OAY33034.1 hypothetical protein MANES_13G064400, partial [Maniho... 82 2e-15
CDP11302.1 unnamed protein product [Coffea canephora] 82 3e-15
KRH01646.1 hypothetical protein GLYMA_18G290200 [Glycine max] 80 5e-15
XP_003621904.1 transcription initiation factor TFIID subunit-lik... 81 5e-15
XP_007212601.1 hypothetical protein PRUPE_ppa016878mg, partial [... 80 6e-15
>XP_017249352.1 PREDICTED: transcription initiation factor TFIID subunit 6 [Daucus
carota subsp. sativus] KZM96490.1 hypothetical protein
DCAR_019732 [Daucus carota subsp. sativus]
Length = 549
Score = 101 bits (252), Expect = 2e-22
Identities = 62/141 (43%), Positives = 76/141 (53%), Gaps = 8/141 (5%)
Frame = +2
Query: 2 RAAGQSIYDKLKMFPPLTFPSAHTVWRTNARVITRSPTNKRKASVE-----DLGQQPPLK 166
RAAGQSIYDKLK+FPPL P AH V R NARVIT + TNK AS D+ Q PLK
Sbjct: 383 RAAGQSIYDKLKLFPPLASPPAHVVLRPNARVITSNLTNKHTASTANTDDMDMEHQSPLK 442
Query: 167 KIANDGTIVTPSDNSLLTDMQVETRVPAXXXXXXXXXXXXXXXXXXXXXXXRGKRDRGEN 346
K+A +G IV S+NS DM+VE R+P G++DRGEN
Sbjct: 443 KVALEGAIVPVSNNSSPHDMEVEARLPDSSGASEASPPSSLQTPNENNKSSEGRKDRGEN 502
Query: 347 EAFCF*VL---KWTEKKRNGR 400
E+ L W E ++G+
Sbjct: 503 ESLRMRALLNQTWKEDLKSGQ 523
>OMP03158.1 putative transcription initiation factor tfiid, partial [Corchorus
capsularis]
Length = 201
Score = 90.1 bits (222), Expect = 1e-19
Identities = 48/79 (60%), Positives = 57/79 (72%)
Frame = +2
Query: 2 RAAGQSIYDKLKMFPPLTFPSAHTVWRTNARVITRSPTNKRKASVEDLGQQPPLKKIAND 181
RAAGQ IYD+LKMFPPL P AHTV ++ RV+T +P NKRKAS+E L +P LK+IA D
Sbjct: 43 RAAGQCIYDRLKMFPPLPSPPAHTVLKSRVRVVTAAP-NKRKASMEPLEHEPALKRIATD 101
Query: 182 GTIVTPSDNSLLTDMQVET 238
G I S NS + MQVET
Sbjct: 102 GPIGVASANSSPSPMQVET 120
>OMO64596.1 TATA box binding protein associated factor (TAF) [Corchorus
olitorius]
Length = 540
Score = 87.4 bits (215), Expect = 3e-17
Identities = 47/79 (59%), Positives = 55/79 (69%)
Frame = +2
Query: 2 RAAGQSIYDKLKMFPPLTFPSAHTVWRTNARVITRSPTNKRKASVEDLGQQPPLKKIAND 181
RAAGQ IYD+LKMFPPL P AH V ++ RV+T +P NKRKAS E L +P LK+IA D
Sbjct: 382 RAAGQCIYDRLKMFPPLPSPPAHAVLKSRERVVTAAP-NKRKASTEPLEHEPALKRIATD 440
Query: 182 GTIVTPSDNSLLTDMQVET 238
G I S NS + MQVET
Sbjct: 441 GPIGVASANSSPSPMQVET 459
>OAY33035.1 hypothetical protein MANES_13G064400, partial [Manihot esculenta]
Length = 466
Score = 85.1 bits (209), Expect = 1e-16
Identities = 48/82 (58%), Positives = 56/82 (68%)
Frame = +2
Query: 5 AAGQSIYDKLKMFPPLTFPSAHTVWRTNARVITRSPTNKRKASVEDLGQQPPLKKIANDG 184
AAGQ IYD+LK+FPPL P AHTVWR+N +V+T S NKRKAS E L +QPP KKIA DG
Sbjct: 312 AAGQCIYDRLKIFPPLPSPPAHTVWRSNGKVVTGS--NKRKASTEHL-EQPPAKKIATDG 368
Query: 185 TIVTPSDNSLLTDMQVETRVPA 250
++ S S MQ E PA
Sbjct: 369 PVMASSSPS---HMQGEAIAPA 387
>OAY33036.1 hypothetical protein MANES_13G064400, partial [Manihot esculenta]
Length = 467
Score = 85.1 bits (209), Expect = 1e-16
Identities = 48/82 (58%), Positives = 56/82 (68%)
Frame = +2
Query: 5 AAGQSIYDKLKMFPPLTFPSAHTVWRTNARVITRSPTNKRKASVEDLGQQPPLKKIANDG 184
AAGQ IYD+LK+FPPL P AHTVWR+N +V+T S NKRKAS E L +QPP KKIA DG
Sbjct: 313 AAGQCIYDRLKIFPPLPSPPAHTVWRSNGKVVTGS--NKRKASTEHL-EQPPAKKIATDG 369
Query: 185 TIVTPSDNSLLTDMQVETRVPA 250
++ S S MQ E PA
Sbjct: 370 PVMASSSPS---HMQGEAIAPA 388
>XP_015881514.1 PREDICTED: transcription initiation factor TFIID subunit 6 isoform
X2 [Ziziphus jujuba]
Length = 541
Score = 85.1 bits (209), Expect = 2e-16
Identities = 42/67 (62%), Positives = 50/67 (74%)
Frame = +2
Query: 2 RAAGQSIYDKLKMFPPLTFPSAHTVWRTNARVITRSPTNKRKASVEDLGQQPPLKKIAND 181
RAAG+SIYD+L MFPPL P+AH+ W+ NARV T SP NKRK + E+ QQPPLKKIA D
Sbjct: 383 RAAGRSIYDRLNMFPPLQSPAAHSYWKANARVATISP-NKRKRNAEETEQQPPLKKIATD 441
Query: 182 GTIVTPS 202
G + S
Sbjct: 442 GPMQADS 448
>XP_015881513.1 PREDICTED: transcription initiation factor TFIID subunit 6 isoform
X1 [Ziziphus jujuba]
Length = 544
Score = 85.1 bits (209), Expect = 2e-16
Identities = 42/67 (62%), Positives = 50/67 (74%)
Frame = +2
Query: 2 RAAGQSIYDKLKMFPPLTFPSAHTVWRTNARVITRSPTNKRKASVEDLGQQPPLKKIAND 181
RAAG+SIYD+L MFPPL P+AH+ W+ NARV T SP NKRK + E+ QQPPLKKIA D
Sbjct: 386 RAAGRSIYDRLNMFPPLQSPAAHSYWKANARVATISP-NKRKRNAEETEQQPPLKKIATD 444
Query: 182 GTIVTPS 202
G + S
Sbjct: 445 GPMQADS 451
>XP_008229836.1 PREDICTED: transcription initiation factor TFIID subunit 6 [Prunus
mume]
Length = 543
Score = 84.3 bits (207), Expect = 3e-16
Identities = 46/82 (56%), Positives = 54/82 (65%)
Frame = +2
Query: 5 AAGQSIYDKLKMFPPLTFPSAHTVWRTNARVITRSPTNKRKASVEDLGQQPPLKKIANDG 184
AAGQ IYD+LKMFP L P+ + WRT+ RVIT NKRK SVE + +QPPLKKIA DG
Sbjct: 384 AAGQCIYDRLKMFPLLPSPAPKSFWRTSQRVITMP--NKRKGSVEHMEEQPPLKKIATDG 441
Query: 185 TIVTPSDNSLLTDMQVETRVPA 250
NS + M+VET PA
Sbjct: 442 PTGIAPTNSSPSHMEVETATPA 463
>GAV62413.1 TAF domain-containing protein/DUF1546 domain-containing protein
[Cephalotus follicularis]
Length = 542
Score = 83.6 bits (205), Expect = 6e-16
Identities = 46/82 (56%), Positives = 54/82 (65%)
Frame = +2
Query: 5 AAGQSIYDKLKMFPPLTFPSAHTVWRTNARVITRSPTNKRKASVEDLGQQPPLKKIANDG 184
AAGQSIYD+LK+FPPL H VWRTN +VIT P NKRKAS+E L + P KK NDG
Sbjct: 383 AAGQSIYDRLKIFPPLPSSLPHAVWRTNRKVITTDP-NKRKASMELLEHESPHKKTENDG 441
Query: 185 TIVTPSDNSLLTDMQVETRVPA 250
S +S + +Q ET VPA
Sbjct: 442 PPAVMSTDSSSSHLQGETLVPA 463
>XP_011467758.1 PREDICTED: transcription initiation factor TFIID subunit 6 isoform
X2 [Fragaria vesca subsp. vesca]
Length = 539
Score = 82.8 bits (203), Expect = 1e-15
Identities = 45/82 (54%), Positives = 55/82 (67%)
Frame = +2
Query: 5 AAGQSIYDKLKMFPPLTFPSAHTVWRTNARVITRSPTNKRKASVEDLGQQPPLKKIANDG 184
AAGQ IYDKLK+FP L P ++W+TN R++ +P NKRK SVE + QQPP KKIA DG
Sbjct: 381 AAGQCIYDKLKIFPTLPSPVPQSLWKTNERIVLTTP-NKRKRSVEPMEQQPPSKKIATDG 439
Query: 185 TIVTPSDNSLLTDMQVETRVPA 250
T NS + MQV+T PA
Sbjct: 440 P--TGLTNSSPSPMQVDTAAPA 459
>XP_004304060.1 PREDICTED: transcription initiation factor TFIID subunit 6 isoform
X1 [Fragaria vesca subsp. vesca] XP_011467757.1
PREDICTED: transcription initiation factor TFIID subunit
6 isoform X1 [Fragaria vesca subsp. vesca]
Length = 542
Score = 82.8 bits (203), Expect = 1e-15
Identities = 45/82 (54%), Positives = 55/82 (67%)
Frame = +2
Query: 5 AAGQSIYDKLKMFPPLTFPSAHTVWRTNARVITRSPTNKRKASVEDLGQQPPLKKIANDG 184
AAGQ IYDKLK+FP L P ++W+TN R++ +P NKRK SVE + QQPP KKIA DG
Sbjct: 384 AAGQCIYDKLKIFPTLPSPVPQSLWKTNERIVLTTP-NKRKRSVEPMEQQPPSKKIATDG 442
Query: 185 TIVTPSDNSLLTDMQVETRVPA 250
T NS + MQV+T PA
Sbjct: 443 P--TGLTNSSPSPMQVDTAAPA 462
>KJB08682.1 hypothetical protein B456_001G097400 [Gossypium raimondii]
Length = 533
Score = 82.0 bits (201), Expect = 2e-15
Identities = 43/79 (54%), Positives = 56/79 (70%)
Frame = +2
Query: 2 RAAGQSIYDKLKMFPPLTFPSAHTVWRTNARVITRSPTNKRKASVEDLGQQPPLKKIAND 181
RAAGQSI+++LK+FPPL AH +W++ +V+T +P NKRKAS E + +P LKKIA D
Sbjct: 381 RAAGQSIFERLKIFPPLPSTPAHAIWKSKEKVVTAAP-NKRKASTEPMEHEPALKKIATD 439
Query: 182 GTIVTPSDNSLLTDMQVET 238
G T S NS + MQVET
Sbjct: 440 GP-TTVSANSSPSPMQVET 457
>XP_016744984.1 PREDICTED: transcription initiation factor TFIID subunit 6
[Gossypium hirsutum]
Length = 534
Score = 82.0 bits (201), Expect = 2e-15
Identities = 43/79 (54%), Positives = 56/79 (70%)
Frame = +2
Query: 2 RAAGQSIYDKLKMFPPLTFPSAHTVWRTNARVITRSPTNKRKASVEDLGQQPPLKKIAND 181
RAAGQSI+++LK+FPPL AH +W++ +V+T +P NKRKAS E + +P LKKIA D
Sbjct: 382 RAAGQSIFERLKIFPPLPSTPAHAIWKSKEKVVTAAP-NKRKASTEPMEHEPALKKIATD 440
Query: 182 GTIVTPSDNSLLTDMQVET 238
G T S NS + MQVET
Sbjct: 441 GP-TTVSANSSPSPMQVET 458
>XP_012472919.1 PREDICTED: transcription initiation factor TFIID subunit 6
[Gossypium raimondii] KJB08681.1 hypothetical protein
B456_001G097400 [Gossypium raimondii]
Length = 534
Score = 82.0 bits (201), Expect = 2e-15
Identities = 43/79 (54%), Positives = 56/79 (70%)
Frame = +2
Query: 2 RAAGQSIYDKLKMFPPLTFPSAHTVWRTNARVITRSPTNKRKASVEDLGQQPPLKKIAND 181
RAAGQSI+++LK+FPPL AH +W++ +V+T +P NKRKAS E + +P LKKIA D
Sbjct: 382 RAAGQSIFERLKIFPPLPSTPAHAIWKSKEKVVTAAP-NKRKASTEPMEHEPALKKIATD 440
Query: 182 GTIVTPSDNSLLTDMQVET 238
G T S NS + MQVET
Sbjct: 441 GP-TTVSANSSPSPMQVET 458
>ACJ85793.1 unknown [Medicago truncatula] AFK38960.1 unknown [Medicago
truncatula]
Length = 326
Score = 80.9 bits (198), Expect = 2e-15
Identities = 41/79 (51%), Positives = 52/79 (65%)
Frame = +2
Query: 2 RAAGQSIYDKLKMFPPLTFPSAHTVWRTNARVITRSPTNKRKASVEDLGQQPPLKKIAND 181
RAAGQ +Y LK+FP P HTVW+T+A V+T SP NKRKAS +L QQPPLKK+ D
Sbjct: 147 RAAGQCVYVSLKLFPAFPSPLPHTVWKTSASVLT-SPPNKRKASPMELEQQPPLKKVDTD 205
Query: 182 GTIVTPSDNSLLTDMQVET 238
G + +NS + + ET
Sbjct: 206 GEVSVVQENSSASHKEEET 224
>OAY33034.1 hypothetical protein MANES_13G064400, partial [Manihot esculenta]
Length = 464
Score = 81.6 bits (200), Expect = 2e-15
Identities = 46/82 (56%), Positives = 55/82 (67%)
Frame = +2
Query: 5 AAGQSIYDKLKMFPPLTFPSAHTVWRTNARVITRSPTNKRKASVEDLGQQPPLKKIANDG 184
AAGQ IYD+LK+FPPL P AHTVWR+N +V+ T+KRKAS E L +QPP KKIA DG
Sbjct: 312 AAGQCIYDRLKIFPPLPSPPAHTVWRSNGKVV----TDKRKASTEHL-EQPPAKKIATDG 366
Query: 185 TIVTPSDNSLLTDMQVETRVPA 250
++ S S MQ E PA
Sbjct: 367 PVMASSSPS---HMQGEAIAPA 385
>CDP11302.1 unnamed protein product [Coffea canephora]
Length = 540
Score = 81.6 bits (200), Expect = 3e-15
Identities = 40/77 (51%), Positives = 53/77 (68%)
Frame = +2
Query: 5 AAGQSIYDKLKMFPPLTFPSAHTVWRTNARVITRSPTNKRKASVEDLGQQPPLKKIANDG 184
AAGQSIYD+LKMFP + P A TVW+TN R+I NKR+ + L +QPP KK+ NDG
Sbjct: 384 AAGQSIYDRLKMFPSMPSPPASTVWKTNFRIIHSCSANKRRTPADLLEEQPPAKKMGNDG 443
Query: 185 TIVTPSDNSLLTDMQVE 235
+V S+NS +DM+ +
Sbjct: 444 ALVPLSNNS--SDMETD 458
>KRH01646.1 hypothetical protein GLYMA_18G290200 [Glycine max]
Length = 303
Score = 79.7 bits (195), Expect = 5e-15
Identities = 40/63 (63%), Positives = 46/63 (73%)
Frame = +2
Query: 2 RAAGQSIYDKLKMFPPLTFPSAHTVWRTNARVITRSPTNKRKASVEDLGQQPPLKKIAND 181
RAAGQ IYD+LK+FP P H VW+TNA+V+T T+KRKAS E L QQPPLKK A D
Sbjct: 147 RAAGQCIYDRLKIFPTFPSPPLHAVWKTNAKVLT--STHKRKASPEQLEQQPPLKKAATD 204
Query: 182 GTI 190
G I
Sbjct: 205 GEI 207
>XP_003621904.1 transcription initiation factor TFIID subunit-like protein
[Medicago truncatula] XP_013447885.1 transcription
initiation factor TFIID subunit-like protein [Medicago
truncatula] AES78122.1 transcription initiation factor
TFIID subunit-like protein [Medicago truncatula]
KEH21912.1 transcription initiation factor TFIID
subunit-like protein [Medicago truncatula]
Length = 562
Score = 80.9 bits (198), Expect = 5e-15
Identities = 41/79 (51%), Positives = 52/79 (65%)
Frame = +2
Query: 2 RAAGQSIYDKLKMFPPLTFPSAHTVWRTNARVITRSPTNKRKASVEDLGQQPPLKKIAND 181
RAAGQ +Y LK+FP P HTVW+T+A V+T SP NKRKAS +L QQPPLKK+ D
Sbjct: 383 RAAGQCVYVSLKLFPAFPSPLPHTVWKTSASVLT-SPPNKRKASPMELEQQPPLKKVDTD 441
Query: 182 GTIVTPSDNSLLTDMQVET 238
G + +NS + + ET
Sbjct: 442 GEVSVVQENSSASHKEEET 460
>XP_007212601.1 hypothetical protein PRUPE_ppa016878mg, partial [Prunus persica]
Length = 454
Score = 80.5 bits (197), Expect = 6e-15
Identities = 41/76 (53%), Positives = 54/76 (71%)
Frame = +2
Query: 2 RAAGQSIYDKLKMFPPLTFPSAHTVWRTNARVITRSPTNKRKASVEDLGQQPPLKKIAND 181
+AAGQ ++D+LKMF L P AH +W++ RV T + TNKRKAS ++L QQPPLKK+A+D
Sbjct: 319 KAAGQCMHDRLKMFHSLLSPPAHAIWKSKGRVAT-TMTNKRKASTDNLMQQPPLKKLASD 377
Query: 182 GTIVTPSDNSLLTDMQ 229
GT NS+ DMQ
Sbjct: 378 GTGGAMPMNSMQVDMQ 393