BLASTX nr result

ID: Panax25_contig00027026 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00027026
         (1040 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ALA55994.1 DNA demethylase [Lonicera japonica]                         53   5e-12
XP_017234921.1 PREDICTED: transcriptional activator DEMETER-like...    47   3e-08
KZN05537.1 hypothetical protein DCAR_006374 [Daucus carota subsp...    47   3e-08
KVI06855.1 DNA glycosylase [Cynara cardunculus var. scolymus]          49   4e-08
XP_002316518.2 hypothetical protein POPTR_0010s24060g [Populus t...    60   3e-06
XP_011024268.1 PREDICTED: transcriptional activator DEMETER [Pop...    59   6e-06

>ALA55994.1 DNA demethylase [Lonicera japonica]
          Length = 1729

 Score = 52.8 bits (125), Expect(3) = 5e-12
 Identities = 24/35 (68%), Positives = 27/35 (77%)
 Frame = -1

Query: 107  KKGKAEGEKKNTFDWDSLRKQAQSNGKRERRKETM 3
            +KGKAE EK    DWDSLR QAQ NGKRER K++M
Sbjct: 1165 RKGKAEDEKYKAIDWDSLRTQAQLNGKRERSKDSM 1199



 Score = 35.8 bits (81), Expect(3) = 5e-12
 Identities = 24/47 (51%), Positives = 30/47 (63%), Gaps = 4/47 (8%)
 Frame = -2

Query: 223  ESISGQDKQKFL--NKTEANAKEQSSSL-KPFNGTG-TNVPHAKKGK 95
            E IS  DKQ  L  N TEANA+E+++S  K  NGT  TN+   +KGK
Sbjct: 1122 ERISVFDKQNCLENNPTEANAREKTNSFGKALNGTSPTNISKGRKGK 1168



 Score = 30.8 bits (68), Expect(3) = 5e-12
 Identities = 12/24 (50%), Positives = 18/24 (75%)
 Frame = -3

Query: 312  SNNYKPEMNKTFRPESTIVTEPVG 241
            +N ++ EM+K+F  EST V EP+G
Sbjct: 1085 NNQHQQEMSKSFHAESTYVKEPIG 1108


>XP_017234921.1 PREDICTED: transcriptional activator DEMETER-like [Daucus carota
            subsp. sativus]
          Length = 1890

 Score = 47.4 bits (111), Expect(2) = 3e-08
 Identities = 22/35 (62%), Positives = 24/35 (68%)
 Frame = -1

Query: 107  KKGKAEGEKKNTFDWDSLRKQAQSNGKRERRKETM 3
            +KGK E   K   DWD LRK AQ NGKRER K+TM
Sbjct: 1339 RKGKGEAGTKIKIDWDYLRKDAQLNGKRERSKDTM 1373



 Score = 39.7 bits (91), Expect(2) = 3e-08
 Identities = 27/78 (34%), Positives = 36/78 (46%), Gaps = 3/78 (3%)
 Frame = -2

Query: 319  SSLQQLQTGDEQDLSSGKYHR-HRACRPAIGGNESISGQDKQKFLNKTEANAK--EQSSS 149
            SS+QQ           G +   H    PA      I+GQ  QK  + T  +    E +SS
Sbjct: 1265 SSVQQEDCPHSNTHELGNFKNLHSELTPAANNTIEINGQQTQKISDNTFGSNTNMENNSS 1324

Query: 148  LKPFNGTGTNVPHAKKGK 95
            + P +GT TNV  A+KGK
Sbjct: 1325 VIPLSGTSTNVSRARKGK 1342


>KZN05537.1 hypothetical protein DCAR_006374 [Daucus carota subsp. sativus]
          Length = 1855

 Score = 47.4 bits (111), Expect(2) = 3e-08
 Identities = 22/35 (62%), Positives = 24/35 (68%)
 Frame = -1

Query: 107  KKGKAEGEKKNTFDWDSLRKQAQSNGKRERRKETM 3
            +KGK E   K   DWD LRK AQ NGKRER K+TM
Sbjct: 1339 RKGKGEAGTKIKIDWDYLRKDAQLNGKRERSKDTM 1373



 Score = 39.7 bits (91), Expect(2) = 3e-08
 Identities = 27/78 (34%), Positives = 36/78 (46%), Gaps = 3/78 (3%)
 Frame = -2

Query: 319  SSLQQLQTGDEQDLSSGKYHR-HRACRPAIGGNESISGQDKQKFLNKTEANAK--EQSSS 149
            SS+QQ           G +   H    PA      I+GQ  QK  + T  +    E +SS
Sbjct: 1265 SSVQQEDCPHSNTHELGNFKNLHSELTPAANNTIEINGQQTQKISDNTFGSNTNMENNSS 1324

Query: 148  LKPFNGTGTNVPHAKKGK 95
            + P +GT TNV  A+KGK
Sbjct: 1325 VIPLSGTSTNVSRARKGK 1342


>KVI06855.1 DNA glycosylase [Cynara cardunculus var. scolymus]
          Length = 1972

 Score = 49.3 bits (116), Expect(2) = 4e-08
 Identities = 24/37 (64%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
 Frame = -1

Query: 116  PTCKKGKAEGEKKNTFDWDSLRKQAQSNG-KRERRKE 9
            P  +KG AE EKK  FDWDSLRK+  SNG KRER K+
Sbjct: 1397 PKVRKGTAEDEKKKAFDWDSLRKKVLSNGEKRERSKD 1433



 Score = 37.4 bits (85), Expect(2) = 4e-08
 Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 3/45 (6%)
 Frame = -2

Query: 223  ESISGQDKQKFLNKT--EANAKEQS-SSLKPFNGTGTNVPHAKKG 98
            + +S  DKQ  +     EAN+KEQ+ +S +P +G GTN+P  +KG
Sbjct: 1358 DRVSAVDKQNCIENAAAEANSKEQNYASHEPLSGAGTNIPKVRKG 1402


>XP_002316518.2 hypothetical protein POPTR_0010s24060g [Populus trichocarpa]
            EEF02689.2 hypothetical protein POPTR_0010s24060g
            [Populus trichocarpa]
          Length = 1867

 Score = 60.5 bits (145), Expect = 3e-06
 Identities = 25/35 (71%), Positives = 31/35 (88%)
 Frame = -1

Query: 107  KKGKAEGEKKNTFDWDSLRKQAQSNGKRERRKETM 3
            +KGK EGEKK+ FDWDSLRKQ Q+NG++ER K+TM
Sbjct: 1318 RKGKVEGEKKDAFDWDSLRKQVQANGRKERAKDTM 1352


>XP_011024268.1 PREDICTED: transcriptional activator DEMETER [Populus euphratica]
            XP_011024269.1 PREDICTED: transcriptional activator
            DEMETER [Populus euphratica] XP_011024270.1 PREDICTED:
            transcriptional activator DEMETER [Populus euphratica]
          Length = 1867

 Score = 59.3 bits (142), Expect = 6e-06
 Identities = 24/35 (68%), Positives = 31/35 (88%)
 Frame = -1

Query: 107  KKGKAEGEKKNTFDWDSLRKQAQSNGKRERRKETM 3
            +KGK EGEKK+ FDWDSLRK+ Q+NG++ER K+TM
Sbjct: 1318 RKGKVEGEKKDAFDWDSLRKEVQTNGRKERAKDTM 1352


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