BLASTX nr result

ID: Panax25_contig00026899 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00026899
         (383 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

4C7Q_A Chain A, Solution Structure Of The Nt. Gr-rbp1 Rrm Domain       64   4e-11
AFL91694.1 glycine-rich RNA binding protein [Raphanus sativus va...    64   2e-10
XP_019235651.1 PREDICTED: glycine-rich RNA-binding protein-like ...    64   2e-10
XP_010555297.1 PREDICTED: glycine-rich RNA-binding protein GRP1A...    64   2e-10
XP_009774643.1 PREDICTED: glycine-rich RNA-binding protein-like ...    64   2e-10
ALM24951.1 glycine-rich RNA-binding protein [Nicotiana tabacum]        64   3e-10
XP_016433528.1 PREDICTED: glycine-rich RNA-binding protein GRP1A...    63   3e-10
XP_017230465.1 PREDICTED: glycine-rich RNA-binding protein [Dauc...    64   4e-10
XP_018631358.1 PREDICTED: glycine-rich RNA-binding protein-like ...    63   4e-10
XP_019238638.1 PREDICTED: glycine-rich RNA-binding protein-like ...    63   6e-10
XP_018628073.1 PREDICTED: glycine-rich RNA-binding protein GRP1A...    62   6e-10
XP_009618693.1 PREDICTED: glycine-rich RNA-binding protein-like ...    63   6e-10
XP_019261400.1 PREDICTED: glycine-rich RNA-binding protein-like ...    63   6e-10
AAC50020.1 RNA-binding protein [Nicotiana glutinosa]                   63   7e-10
XP_016744232.1 PREDICTED: glycine-rich RNA-binding protein GRP1A...    62   8e-10
XP_013600156.1 PREDICTED: glycine-rich RNA-binding protein GRP1A...    62   8e-10
XP_009117376.1 PREDICTED: glycine-rich RNA-binding protein GRP1A...    62   8e-10
AIT97256.1 glycine-rich RNA-binding protein 1-1 [Capsicum annuum]      62   8e-10
AIT97254.1 glycine-rich RNA-binding protein 1-1 [Capsicum annuum]      62   8e-10
KZV36584.1 glycine-rich RNA-binding protein [Dorcoceras hygromet...    62   9e-10

>4C7Q_A Chain A, Solution Structure Of The Nt. Gr-rbp1 Rrm Domain
          Length = 86

 Score = 64.3 bits (155), Expect = 4e-11
 Identities = 34/53 (64%), Positives = 38/53 (71%)
 Frame = -2

Query: 265 IFNVQRINDHEACADLGFRFVTFKDEKSMRDTIEIMNCQDLAGGNITVNEAQA 107
           I + + IND E     GF FVTFKDEK+MRD IE MN QDL G NITVNEAQ+
Sbjct: 33  ILDSKIINDRETGRSRGFGFVTFKDEKAMRDAIEGMNGQDLDGRNITVNEAQS 85


>AFL91694.1 glycine-rich RNA binding protein [Raphanus sativus var.
           raphanistroides]
          Length = 153

 Score = 64.3 bits (155), Expect = 2e-10
 Identities = 33/47 (70%), Positives = 35/47 (74%)
 Frame = -2

Query: 247 INDHEACADLGFRFVTFKDEKSMRDTIEIMNCQDLAGGNITVNEAQA 107
           IND E     GF FVTFKDEKSMRD IE MN QDL G +ITVNEAQ+
Sbjct: 40  INDRETGRSRGFGFVTFKDEKSMRDAIEAMNGQDLDGRSITVNEAQS 86


>XP_019235651.1 PREDICTED: glycine-rich RNA-binding protein-like [Nicotiana
           attenuata] OIT25329.1 glycine-rich rna-binding protein
           [Nicotiana attenuata]
          Length = 156

 Score = 64.3 bits (155), Expect = 2e-10
 Identities = 34/53 (64%), Positives = 38/53 (71%)
 Frame = -2

Query: 265 IFNVQRINDHEACADLGFRFVTFKDEKSMRDTIEIMNCQDLAGGNITVNEAQA 107
           I + + IND E     GF FVTFKDEK+MRD IE MN QDL G NITVNEAQ+
Sbjct: 32  ILDSKIINDRETGRSRGFGFVTFKDEKAMRDAIEGMNGQDLDGRNITVNEAQS 84


>XP_010555297.1 PREDICTED: glycine-rich RNA-binding protein GRP1A-like [Tarenaya
           hassleriana]
          Length = 156

 Score = 64.3 bits (155), Expect = 2e-10
 Identities = 33/47 (70%), Positives = 35/47 (74%)
 Frame = -2

Query: 247 INDHEACADLGFRFVTFKDEKSMRDTIEIMNCQDLAGGNITVNEAQA 107
           IND E     GF FVTFKDEKSMRD IE MN Q+L G NITVNEAQ+
Sbjct: 39  INDRETGRSRGFGFVTFKDEKSMRDAIESMNGQELDGRNITVNEAQS 85


>XP_009774643.1 PREDICTED: glycine-rich RNA-binding protein-like [Nicotiana
           sylvestris] XP_016479391.1 PREDICTED: glycine-rich
           RNA-binding protein-like [Nicotiana tabacum] BAA03741.1
           RNA-binding glycine-rich protein-1a [Nicotiana
           sylvestris] ADG03637.1 RNA-binding glycine-rich protein
           [Nicotiana tabacum]
          Length = 156

 Score = 64.3 bits (155), Expect = 2e-10
 Identities = 34/53 (64%), Positives = 38/53 (71%)
 Frame = -2

Query: 265 IFNVQRINDHEACADLGFRFVTFKDEKSMRDTIEIMNCQDLAGGNITVNEAQA 107
           I + + IND E     GF FVTFKDEK+MRD IE MN QDL G NITVNEAQ+
Sbjct: 32  ILDSKIINDRETGRSRGFGFVTFKDEKAMRDAIEGMNGQDLDGRNITVNEAQS 84


>ALM24951.1 glycine-rich RNA-binding protein [Nicotiana tabacum]
          Length = 154

 Score = 63.9 bits (154), Expect = 3e-10
 Identities = 33/47 (70%), Positives = 35/47 (74%)
 Frame = -2

Query: 247 INDHEACADLGFRFVTFKDEKSMRDTIEIMNCQDLAGGNITVNEAQA 107
           IND E     GF FVTFKDEK+MRD IE MN QDL G NITVNEAQ+
Sbjct: 38  INDRETGRSRGFGFVTFKDEKAMRDAIEGMNGQDLDGRNITVNEAQS 84


>XP_016433528.1 PREDICTED: glycine-rich RNA-binding protein GRP1A-like isoform X2
           [Nicotiana tabacum] XP_018631359.1 PREDICTED:
           glycine-rich RNA-binding protein GRP1A-like isoform X6
           [Nicotiana tomentosiformis]
          Length = 118

 Score = 62.8 bits (151), Expect = 3e-10
 Identities = 33/47 (70%), Positives = 34/47 (72%)
 Frame = -2

Query: 247 INDHEACADLGFRFVTFKDEKSMRDTIEIMNCQDLAGGNITVNEAQA 107
           IND E     GF FVTFKDEK MRD IE MN Q+L G NITVNEAQA
Sbjct: 39  INDRETGRSRGFGFVTFKDEKCMRDAIEGMNGQELDGRNITVNEAQA 85


>XP_017230465.1 PREDICTED: glycine-rich RNA-binding protein [Daucus carota subsp.
           sativus] Q03878.1 RecName: Full=Glycine-rich RNA-binding
           protein CAA41152.1 glycine-rich protein [Daucus carota]
           KZN08920.1 hypothetical protein DCAR_001576 [Daucus
           carota subsp. sativus] prf||1908438A Gly-rich protein
          Length = 157

 Score = 63.5 bits (153), Expect = 4e-10
 Identities = 33/47 (70%), Positives = 35/47 (74%)
 Frame = -2

Query: 247 INDHEACADLGFRFVTFKDEKSMRDTIEIMNCQDLAGGNITVNEAQA 107
           IND E     GF FVTFKDEKSMRD IE MN Q+L G NITVNEAQ+
Sbjct: 38  INDRETGRSRGFGFVTFKDEKSMRDAIEGMNGQELDGRNITVNEAQS 84


>XP_018631358.1 PREDICTED: glycine-rich RNA-binding protein-like isoform X5
           [Nicotiana tomentosiformis]
          Length = 130

 Score = 62.8 bits (151), Expect = 4e-10
 Identities = 33/47 (70%), Positives = 34/47 (72%)
 Frame = -2

Query: 247 INDHEACADLGFRFVTFKDEKSMRDTIEIMNCQDLAGGNITVNEAQA 107
           IND E     GF FVTFKDEK MRD IE MN Q+L G NITVNEAQA
Sbjct: 39  INDRETGRSRGFGFVTFKDEKCMRDAIEGMNGQELDGRNITVNEAQA 85


>XP_019238638.1 PREDICTED: glycine-rich RNA-binding protein-like [Nicotiana
           attenuata] OIT21589.1 glycine-rich rna-binding protein
           [Nicotiana attenuata]
          Length = 143

 Score = 62.8 bits (151), Expect = 6e-10
 Identities = 33/47 (70%), Positives = 34/47 (72%)
 Frame = -2

Query: 247 INDHEACADLGFRFVTFKDEKSMRDTIEIMNCQDLAGGNITVNEAQA 107
           IND E     GF FVTFKDEK MRD IE MN Q+L G NITVNEAQA
Sbjct: 39  INDRETGRSRGFGFVTFKDEKCMRDAIEGMNGQELDGRNITVNEAQA 85


>XP_018628073.1 PREDICTED: glycine-rich RNA-binding protein GRP1A-like isoform X2
           [Nicotiana tomentosiformis]
          Length = 130

 Score = 62.4 bits (150), Expect = 6e-10
 Identities = 32/47 (68%), Positives = 35/47 (74%)
 Frame = -2

Query: 247 INDHEACADLGFRFVTFKDEKSMRDTIEIMNCQDLAGGNITVNEAQA 107
           IND E     GF FVTFKDE++MRD IE MN QDL G NITVNEAQ+
Sbjct: 38  INDRETGRSRGFGFVTFKDEQAMRDAIEGMNGQDLDGRNITVNEAQS 84


>XP_009618693.1 PREDICTED: glycine-rich RNA-binding protein-like isoform X3
           [Nicotiana tomentosiformis]
          Length = 147

 Score = 62.8 bits (151), Expect = 6e-10
 Identities = 33/47 (70%), Positives = 34/47 (72%)
 Frame = -2

Query: 247 INDHEACADLGFRFVTFKDEKSMRDTIEIMNCQDLAGGNITVNEAQA 107
           IND E     GF FVTFKDEK MRD IE MN Q+L G NITVNEAQA
Sbjct: 39  INDRETGRSRGFGFVTFKDEKCMRDAIEGMNGQELDGRNITVNEAQA 85


>XP_019261400.1 PREDICTED: glycine-rich RNA-binding protein-like [Nicotiana
           attenuata] OIT38511.1 glycine-rich rna-binding protein
           [Nicotiana attenuata]
          Length = 149

 Score = 62.8 bits (151), Expect = 6e-10
 Identities = 33/47 (70%), Positives = 34/47 (72%)
 Frame = -2

Query: 247 INDHEACADLGFRFVTFKDEKSMRDTIEIMNCQDLAGGNITVNEAQA 107
           IND E     GF FVTFKDEK MRD IE MN Q+L G NITVNEAQA
Sbjct: 39  INDRETGRSRGFGFVTFKDEKCMRDAIEGMNGQELDGRNITVNEAQA 85


>AAC50020.1 RNA-binding protein [Nicotiana glutinosa]
          Length = 156

 Score = 62.8 bits (151), Expect = 7e-10
 Identities = 33/53 (62%), Positives = 38/53 (71%)
 Frame = -2

Query: 265 IFNVQRINDHEACADLGFRFVTFKDEKSMRDTIEIMNCQDLAGGNITVNEAQA 107
           I + + IND E     GF FVTFKDE++MRD IE MN QDL G NITVNEAQ+
Sbjct: 32  ILDSKIINDRETGRSRGFGFVTFKDEQAMRDAIEGMNGQDLDGRNITVNEAQS 84


>XP_016744232.1 PREDICTED: glycine-rich RNA-binding protein GRP1A-like [Gossypium
           hirsutum]
          Length = 125

 Score = 62.0 bits (149), Expect = 8e-10
 Identities = 32/47 (68%), Positives = 35/47 (74%)
 Frame = -2

Query: 247 INDHEACADLGFRFVTFKDEKSMRDTIEIMNCQDLAGGNITVNEAQA 107
           IND E     GF FVTF+DEKSMRD IE MN Q+L G NITVNEAQ+
Sbjct: 55  INDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEAQS 101


>XP_013600156.1 PREDICTED: glycine-rich RNA-binding protein GRP1A isoform X2
           [Brassica oleracea var. oleracea]
          Length = 141

 Score = 62.4 bits (150), Expect = 8e-10
 Identities = 33/55 (60%), Positives = 37/55 (67%)
 Frame = -2

Query: 271 YMIFNVQRINDHEACADLGFRFVTFKDEKSMRDTIEIMNCQDLAGGNITVNEAQA 107
           Y +     IND E     GF FVTFKDEKSM+D IE MN QDL G +ITVNEAQ+
Sbjct: 6   YFLILKSIINDRETGRSRGFGFVTFKDEKSMKDAIEGMNGQDLDGRSITVNEAQS 60


>XP_009117376.1 PREDICTED: glycine-rich RNA-binding protein GRP1A isoform X2
           [Brassica rapa] XP_013660941.1 PREDICTED: glycine-rich
           RNA-binding protein GRP1A isoform X2 [Brassica napus]
           XP_013707061.1 PREDICTED: glycine-rich RNA-binding
           protein GRP1A isoform X2 [Brassica napus]
          Length = 142

 Score = 62.4 bits (150), Expect = 8e-10
 Identities = 33/55 (60%), Positives = 37/55 (67%)
 Frame = -2

Query: 271 YMIFNVQRINDHEACADLGFRFVTFKDEKSMRDTIEIMNCQDLAGGNITVNEAQA 107
           Y +     IND E     GF FVTFKDEKSM+D IE MN QDL G +ITVNEAQ+
Sbjct: 6   YFLILKSIINDRETGRSRGFGFVTFKDEKSMKDAIEGMNGQDLDGRSITVNEAQS 60


>AIT97256.1 glycine-rich RNA-binding protein 1-1 [Capsicum annuum]
          Length = 144

 Score = 62.4 bits (150), Expect = 8e-10
 Identities = 32/47 (68%), Positives = 35/47 (74%)
 Frame = -2

Query: 247 INDHEACADLGFRFVTFKDEKSMRDTIEIMNCQDLAGGNITVNEAQA 107
           IND E     GF FVTFKDE+SM+D IE MN QDL G NITVNEAQ+
Sbjct: 38  INDRETGRSRGFGFVTFKDEQSMKDAIEGMNGQDLDGRNITVNEAQS 84


>AIT97254.1 glycine-rich RNA-binding protein 1-1 [Capsicum annuum]
          Length = 145

 Score = 62.4 bits (150), Expect = 8e-10
 Identities = 32/47 (68%), Positives = 35/47 (74%)
 Frame = -2

Query: 247 INDHEACADLGFRFVTFKDEKSMRDTIEIMNCQDLAGGNITVNEAQA 107
           IND E     GF FVTFKDE+SM+D IE MN QDL G NITVNEAQ+
Sbjct: 38  INDRETGRSRGFGFVTFKDEQSMKDAIEGMNGQDLDGRNITVNEAQS 84


>KZV36584.1 glycine-rich RNA-binding protein [Dorcoceras hygrometricum]
          Length = 146

 Score = 62.4 bits (150), Expect = 9e-10
 Identities = 32/47 (68%), Positives = 35/47 (74%)
 Frame = -2

Query: 247 INDHEACADLGFRFVTFKDEKSMRDTIEIMNCQDLAGGNITVNEAQA 107
           IND E     GF FVTFKD++SMRD IE MN QDL G NITVNEAQ+
Sbjct: 40  INDRETGRSRGFGFVTFKDDQSMRDAIEGMNGQDLDGRNITVNEAQS 86


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