BLASTX nr result

ID: Panax25_contig00026293 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00026293
         (354 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KVH98254.1 Protein of unknown function DUF179 [Cynara cardunculu...    56   1e-06
XP_010100097.1 hypothetical protein L484_014286 [Morus notabilis...    53   9e-06

>KVH98254.1 Protein of unknown function DUF179 [Cynara cardunculus var.
           scolymus]
          Length = 371

 Score = 55.8 bits (133), Expect = 1e-06
 Identities = 31/67 (46%), Positives = 42/67 (62%), Gaps = 5/67 (7%)
 Frame = +3

Query: 87  MDLWAIQVNSTTQIPFMLKNPYHYEKPI-SWKLRKS---DDENIFEIRVPKRR-RDHQLF 251
           MDLWA+Q+ +  + P++ KN + Y+KP+ SWK RK    D    FEIRVP+        F
Sbjct: 1   MDLWAVQIKTAARCPYVSKNNHLYDKPVSSWKSRKMVSFDVGKAFEIRVPRGTVSSRTSF 60

Query: 252 VVRAVGK 272
           VVRA+GK
Sbjct: 61  VVRAMGK 67


>XP_010100097.1 hypothetical protein L484_014286 [Morus notabilis] EXB81480.1
           hypothetical protein L484_014286 [Morus notabilis]
          Length = 348

 Score = 53.1 bits (126), Expect = 9e-06
 Identities = 40/99 (40%), Positives = 50/99 (50%), Gaps = 10/99 (10%)
 Frame = +3

Query: 87  MDLWAIQVNSTTQIPFMLKNPYHYEKPIS------W-KLRKSDDENIFEIRVPKRRRDHQ 245
           MDLW++QV  T + P  L+N +  EKPIS      W  L    +  +FEIRV KRR    
Sbjct: 1   MDLWSVQVKYTGRSPLFLRNSFP-EKPISLNPGKKWNSLLGIGEGRVFEIRVLKRRVTSS 59

Query: 246 ---LFVVRAVGKXXXXXXXXXXXXXDDNITPEGDGSKGN 353
               FVVRA+GK              D  TPEGDG +G+
Sbjct: 60  GLPSFVVRAMGK--KNHGNSSFSGNGDQSTPEGDGGRGS 96


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