BLASTX nr result
ID: Panax25_contig00026235
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax25_contig00026235
(578 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_017235350.1 PREDICTED: serine/arginine repetitive matrix prot... 69 3e-10
XP_017235348.1 PREDICTED: serine/arginine repetitive matrix prot... 69 3e-10
KZN05105.1 hypothetical protein DCAR_005942 [Daucus carota subsp... 69 3e-10
XP_011032244.1 PREDICTED: serine/arginine repetitive matrix prot... 65 4e-09
XP_002314154.2 hypothetical protein POPTR_0009s04160g [Populus t... 62 7e-08
CBI16084.3 unnamed protein product, partial [Vitis vinifera] 62 9e-08
XP_002280607.2 PREDICTED: serine/arginine repetitive matrix prot... 62 9e-08
XP_011032245.1 PREDICTED: serine/arginine repetitive matrix prot... 59 8e-07
XP_017241799.1 PREDICTED: DNA-directed RNA polymerase III subuni... 59 8e-07
XP_017241796.1 PREDICTED: DNA-directed RNA polymerase III subuni... 59 8e-07
XP_010256831.1 PREDICTED: serine/arginine repetitive matrix prot... 58 1e-06
XP_012573156.1 PREDICTED: serine/arginine repetitive matrix prot... 57 3e-06
XP_015874018.1 PREDICTED: serine/arginine repetitive matrix prot... 50 8e-06
>XP_017235350.1 PREDICTED: serine/arginine repetitive matrix protein 1 isoform X2
[Daucus carota subsp. sativus]
Length = 855
Score = 68.9 bits (167), Expect = 3e-10
Identities = 35/56 (62%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
Frame = -1
Query: 578 QEKVDKMDGKVDSSSKANNDA-SVPSLRHQPRDSSVRSATDEKQMNGRNGSRGRTR 414
QEK+DKMDGKVD+ +A+NDA + S + QPRDSS R + DEK+ NGRNG RGR R
Sbjct: 157 QEKMDKMDGKVDNFVRADNDALNTTSRQRQPRDSSSRLSADEKEANGRNGFRGRIR 212
>XP_017235348.1 PREDICTED: serine/arginine repetitive matrix protein 1 isoform X1
[Daucus carota subsp. sativus] XP_017235349.1 PREDICTED:
serine/arginine repetitive matrix protein 1 isoform X1
[Daucus carota subsp. sativus]
Length = 856
Score = 68.9 bits (167), Expect = 3e-10
Identities = 35/56 (62%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
Frame = -1
Query: 578 QEKVDKMDGKVDSSSKANNDA-SVPSLRHQPRDSSVRSATDEKQMNGRNGSRGRTR 414
QEK+DKMDGKVD+ +A+NDA + S + QPRDSS R + DEK+ NGRNG RGR R
Sbjct: 157 QEKMDKMDGKVDNFVRADNDALNTTSRQRQPRDSSSRLSADEKEANGRNGFRGRIR 212
>KZN05105.1 hypothetical protein DCAR_005942 [Daucus carota subsp. sativus]
Length = 880
Score = 68.9 bits (167), Expect = 3e-10
Identities = 35/56 (62%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
Frame = -1
Query: 578 QEKVDKMDGKVDSSSKANNDA-SVPSLRHQPRDSSVRSATDEKQMNGRNGSRGRTR 414
QEK+DKMDGKVD+ +A+NDA + S + QPRDSS R + DEK+ NGRNG RGR R
Sbjct: 157 QEKMDKMDGKVDNFVRADNDALNTTSRQRQPRDSSSRLSADEKEANGRNGFRGRIR 212
>XP_011032244.1 PREDICTED: serine/arginine repetitive matrix protein 1-like isoform
X1 [Populus euphratica]
Length = 874
Score = 65.5 bits (158), Expect = 4e-09
Identities = 39/74 (52%), Positives = 47/74 (63%)
Frame = -1
Query: 578 QEKVDKMDGKVDSSSKANNDASVPSLRHQPRDSSVRSATDEKQMNGRNGSRGRTRVSRSP 399
+EK+ KMD +V+ KANN A P+ +H S A DEK+ RNG+RGR RVSRSP
Sbjct: 159 REKLKKMDIEVEK--KANN-AMEPASKHMLPKGSSGHAEDEKETEMRNGARGRKRVSRSP 215
Query: 398 HSVQRSLPSLRGSP 357
HS RS S RGSP
Sbjct: 216 HSTDRSFSSPRGSP 229
>XP_002314154.2 hypothetical protein POPTR_0009s04160g [Populus trichocarpa]
EEE88109.2 hypothetical protein POPTR_0009s04160g
[Populus trichocarpa]
Length = 882
Score = 62.0 bits (149), Expect = 7e-08
Identities = 37/74 (50%), Positives = 46/74 (62%)
Frame = -1
Query: 578 QEKVDKMDGKVDSSSKANNDASVPSLRHQPRDSSVRSATDEKQMNGRNGSRGRTRVSRSP 399
+EK+ KMD +V+ KANN A P+ +H S DEK+ + RNG+RGR R SRSP
Sbjct: 159 REKLKKMDIEVEK--KANN-AMEPASKHMLPKGSSGHDEDEKETDMRNGARGRKRASRSP 215
Query: 398 HSVQRSLPSLRGSP 357
HS RS S RGSP
Sbjct: 216 HSTDRSFSSPRGSP 229
>CBI16084.3 unnamed protein product, partial [Vitis vinifera]
Length = 866
Score = 61.6 bits (148), Expect = 9e-08
Identities = 36/74 (48%), Positives = 43/74 (58%)
Frame = -1
Query: 578 QEKVDKMDGKVDSSSKANNDASVPSLRHQPRDSSVRSATDEKQMNGRNGSRGRTRVSRSP 399
QEK+ KMDG +D+S K N P +H SS + D+K RNG RGR RVSRSP
Sbjct: 157 QEKMKKMDGGIDNS-KVTNAVLEPISKHMLPMSSNAHSKDDKGTEERNGLRGRNRVSRSP 215
Query: 398 HSVQRSLPSLRGSP 357
HS S S RG+P
Sbjct: 216 HSAGHSPSSPRGTP 229
>XP_002280607.2 PREDICTED: serine/arginine repetitive matrix protein 1 isoform X1
[Vitis vinifera]
Length = 922
Score = 61.6 bits (148), Expect = 9e-08
Identities = 36/74 (48%), Positives = 43/74 (58%)
Frame = -1
Query: 578 QEKVDKMDGKVDSSSKANNDASVPSLRHQPRDSSVRSATDEKQMNGRNGSRGRTRVSRSP 399
QEK+ KMDG +D+S K N P +H SS + D+K RNG RGR RVSRSP
Sbjct: 157 QEKMKKMDGGIDNS-KVTNAVLEPISKHMLPMSSNAHSKDDKGTEERNGLRGRNRVSRSP 215
Query: 398 HSVQRSLPSLRGSP 357
HS S S RG+P
Sbjct: 216 HSAGHSPSSPRGTP 229
>XP_011032245.1 PREDICTED: serine/arginine repetitive matrix protein 1-like isoform
X2 [Populus euphratica]
Length = 856
Score = 58.9 bits (141), Expect = 8e-07
Identities = 36/71 (50%), Positives = 44/71 (61%)
Frame = -1
Query: 578 QEKVDKMDGKVDSSSKANNDASVPSLRHQPRDSSVRSATDEKQMNGRNGSRGRTRVSRSP 399
+EK+ KMD +V+ KANN A P+ +H S A DEK+ RNG+RGR RVSRSP
Sbjct: 159 REKLKKMDIEVEK--KANN-AMEPASKHMLPKGSSGHAEDEKETEMRNGARGRKRVSRSP 215
Query: 398 HSVQRSLPSLR 366
HS RS S R
Sbjct: 216 HSTDRSFSSPR 226
>XP_017241799.1 PREDICTED: DNA-directed RNA polymerase III subunit 2-like isoform
X3 [Daucus carota subsp. sativus]
Length = 1146
Score = 58.9 bits (141), Expect = 8e-07
Identities = 29/48 (60%), Positives = 37/48 (77%), Gaps = 1/48 (2%)
Frame = -1
Query: 560 MDGKVDSSSKANNDA-SVPSLRHQPRDSSVRSATDEKQMNGRNGSRGR 420
MDGKVD+ +A+NDA + S + QPRD+S R + DEK+ NGRNGSRGR
Sbjct: 1 MDGKVDNFVRADNDALNTTSRQRQPRDTSTRLSADEKEANGRNGSRGR 48
>XP_017241796.1 PREDICTED: DNA-directed RNA polymerase III subunit 2-like isoform
X1 [Daucus carota subsp. sativus] XP_017241797.1
PREDICTED: DNA-directed RNA polymerase III subunit
2-like isoform X2 [Daucus carota subsp. sativus]
XP_017241798.1 PREDICTED: DNA-directed RNA polymerase
III subunit 2-like isoform X2 [Daucus carota subsp.
sativus]
Length = 1183
Score = 58.9 bits (141), Expect = 8e-07
Identities = 29/48 (60%), Positives = 37/48 (77%), Gaps = 1/48 (2%)
Frame = -1
Query: 560 MDGKVDSSSKANNDA-SVPSLRHQPRDSSVRSATDEKQMNGRNGSRGR 420
MDGKVD+ +A+NDA + S + QPRD+S R + DEK+ NGRNGSRGR
Sbjct: 1 MDGKVDNFVRADNDALNTTSRQRQPRDTSTRLSADEKEANGRNGSRGR 48
>XP_010256831.1 PREDICTED: serine/arginine repetitive matrix protein 1-like
[Nelumbo nucifera]
Length = 925
Score = 58.2 bits (139), Expect = 1e-06
Identities = 34/73 (46%), Positives = 44/73 (60%)
Frame = -1
Query: 578 QEKVDKMDGKVDSSSKANNDASVPSLRHQPRDSSVRSATDEKQMNGRNGSRGRTRVSRSP 399
+EK+ KMDG++D N+ + S R Q R SSV +EK+ +G NGSRG RVSRSP
Sbjct: 157 REKMKKMDGEIDVLRTTNSASDPISRRSQSRASSVHP-DEEKEADGINGSRGNNRVSRSP 215
Query: 398 HSVQRSLPSLRGS 360
H V S S R +
Sbjct: 216 HLVDHSPSSHRST 228
>XP_012573156.1 PREDICTED: serine/arginine repetitive matrix protein 1 isoform X1
[Cicer arietinum] XP_012573157.1 PREDICTED:
serine/arginine repetitive matrix protein 1 isoform X1
[Cicer arietinum]
Length = 838
Score = 57.0 bits (136), Expect = 3e-06
Identities = 35/74 (47%), Positives = 47/74 (63%)
Frame = -1
Query: 578 QEKVDKMDGKVDSSSKANNDASVPSLRHQPRDSSVRSATDEKQMNGRNGSRGRTRVSRSP 399
+E++ K+DG +D+ K N++AS P+L+ PRDS D K+ + RNG R R RVSRSP
Sbjct: 157 EERLKKLDGGLDA--KDNDNASDPTLK--PRDSG-HYVQDGKETDKRNGVRARNRVSRSP 211
Query: 398 HSVQRSLPSLRGSP 357
HS S RGSP
Sbjct: 212 HSPAVSTSPYRGSP 225
>XP_015874018.1 PREDICTED: serine/arginine repetitive matrix protein 1 isoform X2
[Ziziphus jujuba]
Length = 917
Score = 49.7 bits (117), Expect(2) = 8e-06
Identities = 31/74 (41%), Positives = 41/74 (55%)
Frame = -1
Query: 578 QEKVDKMDGKVDSSSKANNDASVPSLRHQPRDSSVRSATDEKQMNGRNGSRGRTRVSRSP 399
+E++ KMDG V++ KA+NDA P+ H +S + D K+ RNG R RVSRSP
Sbjct: 157 EERLKKMDGGVET--KASNDALEPNSEHMLTRASSDHSEDAKEAVKRNGVRATHRVSRSP 214
Query: 398 HSVQRSLPSLRGSP 357
S RGSP
Sbjct: 215 RLAGHYSLSPRGSP 228
Score = 27.3 bits (59), Expect(2) = 8e-06
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = -3
Query: 321 SGSPQKSGRSVSSGKMXXXXXXXXXXXXXRDSPKLSFSPRR 199
S SP++ GRS+SS ++ RDSP+ S SP R
Sbjct: 253 SRSPEERGRSISSERVYLSPRRRSVTPRRRDSPRRSKSPIR 293