BLASTX nr result

ID: Panax25_contig00026124 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00026124
         (515 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_008245375.1 PREDICTED: zinc finger CCCH domain-containing pro...    66   1e-09
XP_008245374.1 PREDICTED: zinc finger CCCH domain-containing pro...    66   1e-09
XP_008245373.1 PREDICTED: zinc finger CCCH domain-containing pro...    66   1e-09
XP_011091786.1 PREDICTED: zinc finger CCCH domain-containing pro...    66   2e-09
CAN69883.1 hypothetical protein VITISV_031889 [Vitis vinifera]         65   2e-09
XP_010659258.1 PREDICTED: zinc finger CCCH domain-containing pro...    65   2e-09
XP_010659256.1 PREDICTED: zinc finger CCCH domain-containing pro...    65   2e-09
XP_016437447.1 PREDICTED: zinc finger CCCH domain-containing pro...    65   3e-09
XP_009793365.1 PREDICTED: zinc finger CCCH domain-containing pro...    65   3e-09
XP_019237705.1 PREDICTED: zinc finger CCCH domain-containing pro...    65   3e-09
XP_009793355.1 PREDICTED: zinc finger CCCH domain-containing pro...    65   3e-09
XP_019237704.1 PREDICTED: zinc finger CCCH domain-containing pro...    65   3e-09
XP_009793345.1 PREDICTED: zinc finger CCCH domain-containing pro...    65   3e-09
XP_019237703.1 PREDICTED: zinc finger CCCH domain-containing pro...    65   3e-09
XP_018626799.1 PREDICTED: zinc finger CCCH domain-containing pro...    64   6e-09
XP_009602378.1 PREDICTED: zinc finger CCCH domain-containing pro...    64   6e-09
XP_009602376.1 PREDICTED: zinc finger CCCH domain-containing pro...    64   6e-09
XP_016467694.1 PREDICTED: zinc finger CCCH domain-containing pro...    64   6e-09
XP_009602375.1 PREDICTED: zinc finger CCCH domain-containing pro...    64   6e-09
XP_015881906.1 PREDICTED: zinc finger CCCH domain-containing pro...    64   6e-09

>XP_008245375.1 PREDICTED: zinc finger CCCH domain-containing protein 53-like
           isoform X3 [Prunus mume]
          Length = 746

 Score = 66.2 bits (160), Expect = 1e-09
 Identities = 34/50 (68%), Positives = 39/50 (78%), Gaps = 5/50 (10%)
 Frame = -3

Query: 216 PFYGSTEREPDLIDEFQLQDQLSFLNDG-----PKSPDFYYPQQDLASSP 82
           PFYG+     D+IDEFQLQ+QLSFLNDG     PKSPDF+YPQ DL+SSP
Sbjct: 156 PFYGNGGT--DVIDEFQLQEQLSFLNDGSPALGPKSPDFFYPQTDLSSSP 203


>XP_008245374.1 PREDICTED: zinc finger CCCH domain-containing protein 53-like
           isoform X2 [Prunus mume]
          Length = 748

 Score = 66.2 bits (160), Expect = 1e-09
 Identities = 34/50 (68%), Positives = 39/50 (78%), Gaps = 5/50 (10%)
 Frame = -3

Query: 216 PFYGSTEREPDLIDEFQLQDQLSFLNDG-----PKSPDFYYPQQDLASSP 82
           PFYG+     D+IDEFQLQ+QLSFLNDG     PKSPDF+YPQ DL+SSP
Sbjct: 156 PFYGNGGT--DVIDEFQLQEQLSFLNDGSPALGPKSPDFFYPQTDLSSSP 203


>XP_008245373.1 PREDICTED: zinc finger CCCH domain-containing protein 53-like
           isoform X1 [Prunus mume]
          Length = 756

 Score = 66.2 bits (160), Expect = 1e-09
 Identities = 34/50 (68%), Positives = 39/50 (78%), Gaps = 5/50 (10%)
 Frame = -3

Query: 216 PFYGSTEREPDLIDEFQLQDQLSFLNDG-----PKSPDFYYPQQDLASSP 82
           PFYG+     D+IDEFQLQ+QLSFLNDG     PKSPDF+YPQ DL+SSP
Sbjct: 156 PFYGNGGT--DVIDEFQLQEQLSFLNDGSPALGPKSPDFFYPQTDLSSSP 203


>XP_011091786.1 PREDICTED: zinc finger CCCH domain-containing protein 53 [Sesamum
           indicum]
          Length = 720

 Score = 65.9 bits (159), Expect = 2e-09
 Identities = 49/108 (45%), Positives = 57/108 (52%), Gaps = 11/108 (10%)
 Frame = -3

Query: 372 WAGACNFSEYH-QNPEDLSSPNSY----PSHFNLRXXXXXXXXXXXXXXXXXXXXSAPFY 208
           W  + +FS    Q+P++L SP+ Y    PS  N                      +APFY
Sbjct: 129 WTNSSSFSSSDFQSPDNLISPSGYNGSSPSTMN--------------------SAAAPFY 168

Query: 207 GSTEREPDLIDEFQLQDQLSFLND-----GPKSPDFYY-PQQDLASSP 82
            S E   DLIDE QLQDQLSFLND     GPKS DF+Y  QQDLASSP
Sbjct: 169 ASGE--VDLIDELQLQDQLSFLNDSSPPLGPKSSDFFYQQQQDLASSP 214


>CAN69883.1 hypothetical protein VITISV_031889 [Vitis vinifera]
          Length = 682

 Score = 65.5 bits (158), Expect = 2e-09
 Identities = 34/51 (66%), Positives = 38/51 (74%), Gaps = 5/51 (9%)
 Frame = -3

Query: 219 APFYGSTEREPDLIDEFQLQDQLSFLND-----GPKSPDFYYPQQDLASSP 82
           +PFYG      DLIDEFQLQDQLSFLND     GPK+PD +Y QQ+LASSP
Sbjct: 170 SPFYGGN----DLIDEFQLQDQLSFLNDGSPTLGPKNPDLFYSQQELASSP 216


>XP_010659258.1 PREDICTED: zinc finger CCCH domain-containing protein 53 isoform X2
           [Vitis vinifera]
          Length = 734

 Score = 65.5 bits (158), Expect = 2e-09
 Identities = 34/51 (66%), Positives = 38/51 (74%), Gaps = 5/51 (9%)
 Frame = -3

Query: 219 APFYGSTEREPDLIDEFQLQDQLSFLND-----GPKSPDFYYPQQDLASSP 82
           +PFYG      DLIDEFQLQDQLSFLND     GPK+PD +Y QQ+LASSP
Sbjct: 170 SPFYGGN----DLIDEFQLQDQLSFLNDGSPTLGPKNPDLFYSQQELASSP 216


>XP_010659256.1 PREDICTED: zinc finger CCCH domain-containing protein 53 isoform X1
           [Vitis vinifera] XP_010659257.1 PREDICTED: zinc finger
           CCCH domain-containing protein 53 isoform X1 [Vitis
           vinifera]
          Length = 736

 Score = 65.5 bits (158), Expect = 2e-09
 Identities = 34/51 (66%), Positives = 38/51 (74%), Gaps = 5/51 (9%)
 Frame = -3

Query: 219 APFYGSTEREPDLIDEFQLQDQLSFLND-----GPKSPDFYYPQQDLASSP 82
           +PFYG      DLIDEFQLQDQLSFLND     GPK+PD +Y QQ+LASSP
Sbjct: 170 SPFYGGN----DLIDEFQLQDQLSFLNDGSPTLGPKNPDLFYSQQELASSP 216


>XP_016437447.1 PREDICTED: zinc finger CCCH domain-containing protein 53-like
           isoform X2 [Nicotiana tabacum]
          Length = 698

 Score = 65.1 bits (157), Expect = 3e-09
 Identities = 38/53 (71%), Positives = 39/53 (73%), Gaps = 8/53 (15%)
 Frame = -3

Query: 216 PFYGSTEREPDLIDEFQLQDQLSFLND-----GPKSPDFYYP---QQDLASSP 82
           PFY S E   DLIDEFQLQDQLSFLND     GPK+PD YYP   QQDLASSP
Sbjct: 157 PFYCSGEM--DLIDEFQLQDQLSFLNDGSPTLGPKNPDVYYPQQQQQDLASSP 207


>XP_009793365.1 PREDICTED: zinc finger CCCH domain-containing protein 53-like
           isoform X3 [Nicotiana sylvestris]
          Length = 699

 Score = 65.1 bits (157), Expect = 3e-09
 Identities = 38/53 (71%), Positives = 39/53 (73%), Gaps = 8/53 (15%)
 Frame = -3

Query: 216 PFYGSTEREPDLIDEFQLQDQLSFLND-----GPKSPDFYYP---QQDLASSP 82
           PFY S E   DLIDEFQLQDQLSFLND     GPK+PD YYP   QQDLASSP
Sbjct: 157 PFYCSGEM--DLIDEFQLQDQLSFLNDGSPTLGPKNPDVYYPQQQQQDLASSP 207


>XP_019237705.1 PREDICTED: zinc finger CCCH domain-containing protein 53-like
           isoform X3 [Nicotiana attenuata]
          Length = 700

 Score = 65.1 bits (157), Expect = 3e-09
 Identities = 38/53 (71%), Positives = 39/53 (73%), Gaps = 8/53 (15%)
 Frame = -3

Query: 216 PFYGSTEREPDLIDEFQLQDQLSFLND-----GPKSPDFYYP---QQDLASSP 82
           PFY S E   DLIDEFQLQDQLSFLND     GPK+PD YYP   QQDLASSP
Sbjct: 158 PFYCSGEM--DLIDEFQLQDQLSFLNDGSPTLGPKNPDVYYPQQQQQDLASSP 208


>XP_009793355.1 PREDICTED: zinc finger CCCH domain-containing protein 53-like
           isoform X2 [Nicotiana sylvestris] XP_016437446.1
           PREDICTED: zinc finger CCCH domain-containing protein
           53-like isoform X1 [Nicotiana tabacum]
          Length = 724

 Score = 65.1 bits (157), Expect = 3e-09
 Identities = 38/53 (71%), Positives = 39/53 (73%), Gaps = 8/53 (15%)
 Frame = -3

Query: 216 PFYGSTEREPDLIDEFQLQDQLSFLND-----GPKSPDFYYP---QQDLASSP 82
           PFY S E   DLIDEFQLQDQLSFLND     GPK+PD YYP   QQDLASSP
Sbjct: 157 PFYCSGEM--DLIDEFQLQDQLSFLNDGSPTLGPKNPDVYYPQQQQQDLASSP 207


>XP_019237704.1 PREDICTED: zinc finger CCCH domain-containing protein 53-like
           isoform X2 [Nicotiana attenuata] OIT22236.1 zinc finger
           ccch domain-containing protein 53 [Nicotiana attenuata]
          Length = 725

 Score = 65.1 bits (157), Expect = 3e-09
 Identities = 38/53 (71%), Positives = 39/53 (73%), Gaps = 8/53 (15%)
 Frame = -3

Query: 216 PFYGSTEREPDLIDEFQLQDQLSFLND-----GPKSPDFYYP---QQDLASSP 82
           PFY S E   DLIDEFQLQDQLSFLND     GPK+PD YYP   QQDLASSP
Sbjct: 158 PFYCSGEM--DLIDEFQLQDQLSFLNDGSPTLGPKNPDVYYPQQQQQDLASSP 208


>XP_009793345.1 PREDICTED: zinc finger CCCH domain-containing protein 53-like
           isoform X1 [Nicotiana sylvestris]
          Length = 725

 Score = 65.1 bits (157), Expect = 3e-09
 Identities = 38/53 (71%), Positives = 39/53 (73%), Gaps = 8/53 (15%)
 Frame = -3

Query: 216 PFYGSTEREPDLIDEFQLQDQLSFLND-----GPKSPDFYYP---QQDLASSP 82
           PFY S E   DLIDEFQLQDQLSFLND     GPK+PD YYP   QQDLASSP
Sbjct: 157 PFYCSGEM--DLIDEFQLQDQLSFLNDGSPTLGPKNPDVYYPQQQQQDLASSP 207


>XP_019237703.1 PREDICTED: zinc finger CCCH domain-containing protein 53-like
           isoform X1 [Nicotiana attenuata]
          Length = 726

 Score = 65.1 bits (157), Expect = 3e-09
 Identities = 38/53 (71%), Positives = 39/53 (73%), Gaps = 8/53 (15%)
 Frame = -3

Query: 216 PFYGSTEREPDLIDEFQLQDQLSFLND-----GPKSPDFYYP---QQDLASSP 82
           PFY S E   DLIDEFQLQDQLSFLND     GPK+PD YYP   QQDLASSP
Sbjct: 158 PFYCSGEM--DLIDEFQLQDQLSFLNDGSPTLGPKNPDVYYPQQQQQDLASSP 208


>XP_018626799.1 PREDICTED: zinc finger CCCH domain-containing protein 53 isoform X4
           [Nicotiana tomentosiformis]
          Length = 699

 Score = 64.3 bits (155), Expect = 6e-09
 Identities = 38/55 (69%), Positives = 39/55 (70%), Gaps = 10/55 (18%)
 Frame = -3

Query: 216 PFYGSTEREPDLIDEFQLQDQLSFLND-----GPKSPDFYYP-----QQDLASSP 82
           PFY S E   DLIDEFQLQDQLSFLND     GPK+PD YYP     QQDLASSP
Sbjct: 156 PFYCSGEM--DLIDEFQLQDQLSFLNDGSPTLGPKNPDVYYPHQQQQQQDLASSP 208


>XP_009602378.1 PREDICTED: zinc finger CCCH domain-containing protein 53 isoform X3
           [Nicotiana tomentosiformis]
          Length = 700

 Score = 64.3 bits (155), Expect = 6e-09
 Identities = 38/55 (69%), Positives = 39/55 (70%), Gaps = 10/55 (18%)
 Frame = -3

Query: 216 PFYGSTEREPDLIDEFQLQDQLSFLND-----GPKSPDFYYP-----QQDLASSP 82
           PFY S E   DLIDEFQLQDQLSFLND     GPK+PD YYP     QQDLASSP
Sbjct: 156 PFYCSGEM--DLIDEFQLQDQLSFLNDGSPTLGPKNPDVYYPHQQQQQQDLASSP 208


>XP_009602376.1 PREDICTED: zinc finger CCCH domain-containing protein 53 isoform X2
           [Nicotiana tomentosiformis]
          Length = 725

 Score = 64.3 bits (155), Expect = 6e-09
 Identities = 38/55 (69%), Positives = 39/55 (70%), Gaps = 10/55 (18%)
 Frame = -3

Query: 216 PFYGSTEREPDLIDEFQLQDQLSFLND-----GPKSPDFYYP-----QQDLASSP 82
           PFY S E   DLIDEFQLQDQLSFLND     GPK+PD YYP     QQDLASSP
Sbjct: 156 PFYCSGEM--DLIDEFQLQDQLSFLNDGSPTLGPKNPDVYYPHQQQQQQDLASSP 208


>XP_016467694.1 PREDICTED: zinc finger CCCH domain-containing protein 53-like
           [Nicotiana tabacum]
          Length = 726

 Score = 64.3 bits (155), Expect = 6e-09
 Identities = 38/55 (69%), Positives = 39/55 (70%), Gaps = 10/55 (18%)
 Frame = -3

Query: 216 PFYGSTEREPDLIDEFQLQDQLSFLND-----GPKSPDFYYP-----QQDLASSP 82
           PFY S E   DLIDEFQLQDQLSFLND     GPK+PD YYP     QQDLASSP
Sbjct: 156 PFYCSGEM--DLIDEFQLQDQLSFLNDGSPTLGPKNPDVYYPHQQQQQQDLASSP 208


>XP_009602375.1 PREDICTED: zinc finger CCCH domain-containing protein 53 isoform X1
           [Nicotiana tomentosiformis]
          Length = 726

 Score = 64.3 bits (155), Expect = 6e-09
 Identities = 38/55 (69%), Positives = 39/55 (70%), Gaps = 10/55 (18%)
 Frame = -3

Query: 216 PFYGSTEREPDLIDEFQLQDQLSFLND-----GPKSPDFYYP-----QQDLASSP 82
           PFY S E   DLIDEFQLQDQLSFLND     GPK+PD YYP     QQDLASSP
Sbjct: 156 PFYCSGEM--DLIDEFQLQDQLSFLNDGSPTLGPKNPDVYYPHQQQQQQDLASSP 208


>XP_015881906.1 PREDICTED: zinc finger CCCH domain-containing protein 53 [Ziziphus
           jujuba]
          Length = 751

 Score = 64.3 bits (155), Expect = 6e-09
 Identities = 40/91 (43%), Positives = 49/91 (53%), Gaps = 5/91 (5%)
 Frame = -3

Query: 339 QNPEDLSSPNSYPSHFNLRXXXXXXXXXXXXXXXXXXXXSAPFYGSTEREPDLIDEFQLQ 160
           QN  DL SPN+ P                          S P+YG+     D++D+FQLQ
Sbjct: 135 QNQTDLISPNNLP--------------LGPSSSSSMNSASLPYYGNGVN--DVMDDFQLQ 178

Query: 159 DQLSFLNDG-----PKSPDFYYPQQDLASSP 82
           DQLSFLNDG     PK+PD +YPQQDL+SSP
Sbjct: 179 DQLSFLNDGSPTLGPKNPDLFYPQQDLSSSP 209


Top