BLASTX nr result

ID: Panax25_contig00026056 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00026056
         (566 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017245996.1 PREDICTED: chromatin structure-remodeling complex...    69   4e-10
KZM99589.1 hypothetical protein DCAR_013049 [Daucus carota subsp...    69   4e-10
XP_017245995.1 PREDICTED: chromatin structure-remodeling complex...    69   4e-10
XP_017245992.1 PREDICTED: chromatin structure-remodeling complex...    69   4e-10

>XP_017245996.1 PREDICTED: chromatin structure-remodeling complex protein SYD isoform
            X3 [Daucus carota subsp. sativus]
          Length = 3131

 Score = 68.6 bits (166), Expect = 4e-10
 Identities = 66/209 (31%), Positives = 93/209 (44%), Gaps = 26/209 (12%)
 Frame = +3

Query: 15   SALSTLETMTLTQSLDNKTNSALSTLETDLDSDFVKVGSPSEKEGGEKVEAAVKLLLDGS 194
            SA+S +ET   T    + +N A STLET+  SD  KVGSP EKE   K+E    +    S
Sbjct: 2377 SAVSNMETCIATLDSGDTSNLASSTLETNQTSDAAKVGSPVEKECCGKLEEVPGVDTSES 2436

Query: 195  ---------VAPTPEV------------HKSESQRNAADCVLNVADPEIFIEERSFDDNG 311
                     +A T +             H SE   +A DC+++     +    RS +DN 
Sbjct: 2437 PKINSYVQDIAETDKFTQESLEGKDAIHHVSEKCGDAEDCMVHSTREAV----RSVEDNV 2492

Query: 312  K----SVEEKNSVMDQVASYAEDKPVAVNDAMVVIKESVNSYEEKVALDRKGKAVVRNLG 479
            +     VE + S+   + S   D      DAM   KE++NSY+    LD +G   V + G
Sbjct: 2493 RVDDAVVENRESINSYLVSTTTD------DAMAETKETINSYQVSAPLDGRGHDSVASSG 2546

Query: 480  AEYTSE-TAVGWRNAVASDEDGTGIVGEK 563
            A+   E  A    +AV   E   G+V EK
Sbjct: 2547 ADRNFEIIADAVNDAVGDTECSAGLVMEK 2575


>KZM99589.1 hypothetical protein DCAR_013049 [Daucus carota subsp. sativus]
          Length = 3568

 Score = 68.6 bits (166), Expect = 4e-10
 Identities = 66/209 (31%), Positives = 93/209 (44%), Gaps = 26/209 (12%)
 Frame = +3

Query: 15   SALSTLETMTLTQSLDNKTNSALSTLETDLDSDFVKVGSPSEKEGGEKVEAAVKLLLDGS 194
            SA+S +ET   T    + +N A STLET+  SD  KVGSP EKE   K+E    +    S
Sbjct: 2307 SAVSNMETCIATLDSGDTSNLASSTLETNQTSDAAKVGSPVEKECCGKLEEVPGVDTSES 2366

Query: 195  ---------VAPTPEV------------HKSESQRNAADCVLNVADPEIFIEERSFDDNG 311
                     +A T +             H SE   +A DC+++     +    RS +DN 
Sbjct: 2367 PKINSYVQDIAETDKFTQESLEGKDAIHHVSEKCGDAEDCMVHSTREAV----RSVEDNV 2422

Query: 312  K----SVEEKNSVMDQVASYAEDKPVAVNDAMVVIKESVNSYEEKVALDRKGKAVVRNLG 479
            +     VE + S+   + S   D      DAM   KE++NSY+    LD +G   V + G
Sbjct: 2423 RVDDAVVENRESINSYLVSTTTD------DAMAETKETINSYQVSAPLDGRGHDSVASSG 2476

Query: 480  AEYTSE-TAVGWRNAVASDEDGTGIVGEK 563
            A+   E  A    +AV   E   G+V EK
Sbjct: 2477 ADRNFEIIADAVNDAVGDTECSAGLVMEK 2505



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 59/200 (29%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
 Frame = +3

Query: 9    KCSALSTLETMTLTQSLDNKTNSALSTLETDLDSDFVKVGSPSEKEGGEKVE-------- 164
            K SAL  +ET   T+  ++ +N A S  ETD  SD  KVGSP EK    K+E        
Sbjct: 2821 KVSALCDMETSIATEGSNDTSNLASSNFETDQTSDAAKVGSPVEKICAGKLEEVPEVDVF 2880

Query: 165  ----AAVKLLLDGSVAPTPEV-HKSESQRNAADCVLNVADPEIFIEERSFDDNGKSVEEK 329
                A      + S+    E+ H SE   +  DC++++    +   E +   +   VE +
Sbjct: 2881 VQDIADTNKSTEESLRSKDEIQHVSEKSVDTKDCLVHITKEAVSYVEGNIRADDAVVETR 2940

Query: 330  NSV-MDQVASYAEDKPVAVNDAMVVIKESVNSYEEKVALDRKGKAVVRNLGAEYTSETAV 506
              + +DQV +  +       +A V  K+S NS +   ALD +G  +V +   +   ET  
Sbjct: 2941 ELINIDQVNATRD-------NATVESKDSRNSCQVSAALDGRGDDLVGSSAPDKNIETIA 2993

Query: 507  GWRNAVASDED-GTGIVGEK 563
            G  N V  + D   G+V EK
Sbjct: 2994 GAINVVVGNADCSAGLVTEK 3013


>XP_017245995.1 PREDICTED: chromatin structure-remodeling complex protein SYD isoform
            X2 [Daucus carota subsp. sativus]
          Length = 3635

 Score = 68.6 bits (166), Expect = 4e-10
 Identities = 66/209 (31%), Positives = 93/209 (44%), Gaps = 26/209 (12%)
 Frame = +3

Query: 15   SALSTLETMTLTQSLDNKTNSALSTLETDLDSDFVKVGSPSEKEGGEKVEAAVKLLLDGS 194
            SA+S +ET   T    + +N A STLET+  SD  KVGSP EKE   K+E    +    S
Sbjct: 2377 SAVSNMETCIATLDSGDTSNLASSTLETNQTSDAAKVGSPVEKECCGKLEEVPGVDTSES 2436

Query: 195  ---------VAPTPEV------------HKSESQRNAADCVLNVADPEIFIEERSFDDNG 311
                     +A T +             H SE   +A DC+++     +    RS +DN 
Sbjct: 2437 PKINSYVQDIAETDKFTQESLEGKDAIHHVSEKCGDAEDCMVHSTREAV----RSVEDNV 2492

Query: 312  K----SVEEKNSVMDQVASYAEDKPVAVNDAMVVIKESVNSYEEKVALDRKGKAVVRNLG 479
            +     VE + S+   + S   D      DAM   KE++NSY+    LD +G   V + G
Sbjct: 2493 RVDDAVVENRESINSYLVSTTTD------DAMAETKETINSYQVSAPLDGRGHDSVASSG 2546

Query: 480  AEYTSE-TAVGWRNAVASDEDGTGIVGEK 563
            A+   E  A    +AV   E   G+V EK
Sbjct: 2547 ADRNFEIIADAVNDAVGDTECSAGLVMEK 2575



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 59/200 (29%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
 Frame = +3

Query: 9    KCSALSTLETMTLTQSLDNKTNSALSTLETDLDSDFVKVGSPSEKEGGEKVE-------- 164
            K SAL  +ET   T+  ++ +N A S  ETD  SD  KVGSP EK    K+E        
Sbjct: 2888 KVSALCDMETSIATEGSNDTSNLASSNFETDQTSDAAKVGSPVEKICAGKLEEVPEVDVF 2947

Query: 165  ----AAVKLLLDGSVAPTPEV-HKSESQRNAADCVLNVADPEIFIEERSFDDNGKSVEEK 329
                A      + S+    E+ H SE   +  DC++++    +   E +   +   VE +
Sbjct: 2948 VQDIADTNKSTEESLRSKDEIQHVSEKSVDTKDCLVHITKEAVSYVEGNIRADDAVVETR 3007

Query: 330  NSV-MDQVASYAEDKPVAVNDAMVVIKESVNSYEEKVALDRKGKAVVRNLGAEYTSETAV 506
              + +DQV +  +       +A V  K+S NS +   ALD +G  +V +   +   ET  
Sbjct: 3008 ELINIDQVNATRD-------NATVESKDSRNSCQVSAALDGRGDDLVGSSAPDKNIETIA 3060

Query: 507  GWRNAVASDED-GTGIVGEK 563
            G  N V  + D   G+V EK
Sbjct: 3061 GAINVVVGNADCSAGLVTEK 3080


>XP_017245992.1 PREDICTED: chromatin structure-remodeling complex protein SYD isoform
            X1 [Daucus carota subsp. sativus] XP_017245993.1
            PREDICTED: chromatin structure-remodeling complex protein
            SYD isoform X1 [Daucus carota subsp. sativus]
            XP_017245994.1 PREDICTED: chromatin structure-remodeling
            complex protein SYD isoform X1 [Daucus carota subsp.
            sativus]
          Length = 3638

 Score = 68.6 bits (166), Expect = 4e-10
 Identities = 66/209 (31%), Positives = 93/209 (44%), Gaps = 26/209 (12%)
 Frame = +3

Query: 15   SALSTLETMTLTQSLDNKTNSALSTLETDLDSDFVKVGSPSEKEGGEKVEAAVKLLLDGS 194
            SA+S +ET   T    + +N A STLET+  SD  KVGSP EKE   K+E    +    S
Sbjct: 2377 SAVSNMETCIATLDSGDTSNLASSTLETNQTSDAAKVGSPVEKECCGKLEEVPGVDTSES 2436

Query: 195  ---------VAPTPEV------------HKSESQRNAADCVLNVADPEIFIEERSFDDNG 311
                     +A T +             H SE   +A DC+++     +    RS +DN 
Sbjct: 2437 PKINSYVQDIAETDKFTQESLEGKDAIHHVSEKCGDAEDCMVHSTREAV----RSVEDNV 2492

Query: 312  K----SVEEKNSVMDQVASYAEDKPVAVNDAMVVIKESVNSYEEKVALDRKGKAVVRNLG 479
            +     VE + S+   + S   D      DAM   KE++NSY+    LD +G   V + G
Sbjct: 2493 RVDDAVVENRESINSYLVSTTTD------DAMAETKETINSYQVSAPLDGRGHDSVASSG 2546

Query: 480  AEYTSE-TAVGWRNAVASDEDGTGIVGEK 563
            A+   E  A    +AV   E   G+V EK
Sbjct: 2547 ADRNFEIIADAVNDAVGDTECSAGLVMEK 2575



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 59/200 (29%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
 Frame = +3

Query: 9    KCSALSTLETMTLTQSLDNKTNSALSTLETDLDSDFVKVGSPSEKEGGEKVE-------- 164
            K SAL  +ET   T+  ++ +N A S  ETD  SD  KVGSP EK    K+E        
Sbjct: 2891 KVSALCDMETSIATEGSNDTSNLASSNFETDQTSDAAKVGSPVEKICAGKLEEVPEVDVF 2950

Query: 165  ----AAVKLLLDGSVAPTPEV-HKSESQRNAADCVLNVADPEIFIEERSFDDNGKSVEEK 329
                A      + S+    E+ H SE   +  DC++++    +   E +   +   VE +
Sbjct: 2951 VQDIADTNKSTEESLRSKDEIQHVSEKSVDTKDCLVHITKEAVSYVEGNIRADDAVVETR 3010

Query: 330  NSV-MDQVASYAEDKPVAVNDAMVVIKESVNSYEEKVALDRKGKAVVRNLGAEYTSETAV 506
              + +DQV +  +       +A V  K+S NS +   ALD +G  +V +   +   ET  
Sbjct: 3011 ELINIDQVNATRD-------NATVESKDSRNSCQVSAALDGRGDDLVGSSAPDKNIETIA 3063

Query: 507  GWRNAVASDED-GTGIVGEK 563
            G  N V  + D   G+V EK
Sbjct: 3064 GAINVVVGNADCSAGLVTEK 3083


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