BLASTX nr result

ID: Panax25_contig00025935 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00025935
         (389 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CAN65947.1 hypothetical protein VITISV_020727 [Vitis vinifera]         60   7e-08
XP_002283850.1 PREDICTED: ribosomal L1 domain-containing protein...    59   1e-07

>CAN65947.1 hypothetical protein VITISV_020727 [Vitis vinifera]
          Length = 394

 Score = 59.7 bits (143), Expect = 7e-08
 Identities = 48/133 (36%), Positives = 55/133 (41%), Gaps = 4/133 (3%)
 Frame = +1

Query: 1   LKFSESLALPVYQTVPDMKLKIQXXXXXXXXXXXXXXXXXXXXXDRXXXXXXXXXXXXXX 180
           LK  ESLALPVYQ VPDM+LKI+                     +               
Sbjct: 231 LKLLESLALPVYQAVPDMRLKIEGVLEKESEEVKEEE-------ESGRVEKGEKKKVGKK 283

Query: 181 XRIHEIRYMXXXXXXXXXXXXXXXXXNESKTIED---DDLIGNDEFVGK-RKKGGLVKEL 348
            RIHE+RYM                 +E     D   DD +G  E VGK RKK    KE 
Sbjct: 284 GRIHEVRYMDGDVGGLLEEDELDGDGDEDDDEGDKSADDELGGGEIVGKKRKKXXTKKEQ 343

Query: 349 ALSEQNAEKPGKK 387
           ALS+ N EKP KK
Sbjct: 344 ALSDLNGEKPLKK 356


>XP_002283850.1 PREDICTED: ribosomal L1 domain-containing protein 1 [Vitis
           vinifera]
          Length = 394

 Score = 58.9 bits (141), Expect = 1e-07
 Identities = 48/133 (36%), Positives = 55/133 (41%), Gaps = 4/133 (3%)
 Frame = +1

Query: 1   LKFSESLALPVYQTVPDMKLKIQXXXXXXXXXXXXXXXXXXXXXDRXXXXXXXXXXXXXX 180
           LK  ESLALPVYQ VPDM+LKI+                     +               
Sbjct: 231 LKLLESLALPVYQAVPDMRLKIEGVLEKESEEVKEEE-------ESGRVEKGEKKKVGKK 283

Query: 181 XRIHEIRYMXXXXXXXXXXXXXXXXXNESKTIED---DDLIGNDEFVGK-RKKGGLVKEL 348
            RIHE+RYM                 +E     D   DD +G  E VGK RKK    KE 
Sbjct: 284 GRIHEVRYMDGDVGGLLEEDELDGDGDEDDDEGDKSADDELGGGEIVGKKRKKEKTKKEQ 343

Query: 349 ALSEQNAEKPGKK 387
           ALS+ N EKP KK
Sbjct: 344 ALSDLNGEKPLKK 356


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