BLASTX nr result
ID: Panax25_contig00025935
seq
BLASTX 2.2.26 [Sep-21-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax25_contig00025935 (389 letters) Database: ./nr 115,041,592 sequences; 42,171,959,267 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value CAN65947.1 hypothetical protein VITISV_020727 [Vitis vinifera] 60 7e-08 XP_002283850.1 PREDICTED: ribosomal L1 domain-containing protein... 59 1e-07 >CAN65947.1 hypothetical protein VITISV_020727 [Vitis vinifera] Length = 394 Score = 59.7 bits (143), Expect = 7e-08 Identities = 48/133 (36%), Positives = 55/133 (41%), Gaps = 4/133 (3%) Frame = +1 Query: 1 LKFSESLALPVYQTVPDMKLKIQXXXXXXXXXXXXXXXXXXXXXDRXXXXXXXXXXXXXX 180 LK ESLALPVYQ VPDM+LKI+ + Sbjct: 231 LKLLESLALPVYQAVPDMRLKIEGVLEKESEEVKEEE-------ESGRVEKGEKKKVGKK 283 Query: 181 XRIHEIRYMXXXXXXXXXXXXXXXXXNESKTIED---DDLIGNDEFVGK-RKKGGLVKEL 348 RIHE+RYM +E D DD +G E VGK RKK KE Sbjct: 284 GRIHEVRYMDGDVGGLLEEDELDGDGDEDDDEGDKSADDELGGGEIVGKKRKKXXTKKEQ 343 Query: 349 ALSEQNAEKPGKK 387 ALS+ N EKP KK Sbjct: 344 ALSDLNGEKPLKK 356 >XP_002283850.1 PREDICTED: ribosomal L1 domain-containing protein 1 [Vitis vinifera] Length = 394 Score = 58.9 bits (141), Expect = 1e-07 Identities = 48/133 (36%), Positives = 55/133 (41%), Gaps = 4/133 (3%) Frame = +1 Query: 1 LKFSESLALPVYQTVPDMKLKIQXXXXXXXXXXXXXXXXXXXXXDRXXXXXXXXXXXXXX 180 LK ESLALPVYQ VPDM+LKI+ + Sbjct: 231 LKLLESLALPVYQAVPDMRLKIEGVLEKESEEVKEEE-------ESGRVEKGEKKKVGKK 283 Query: 181 XRIHEIRYMXXXXXXXXXXXXXXXXXNESKTIED---DDLIGNDEFVGK-RKKGGLVKEL 348 RIHE+RYM +E D DD +G E VGK RKK KE Sbjct: 284 GRIHEVRYMDGDVGGLLEEDELDGDGDEDDDEGDKSADDELGGGEIVGKKRKKEKTKKEQ 343 Query: 349 ALSEQNAEKPGKK 387 ALS+ N EKP KK Sbjct: 344 ALSDLNGEKPLKK 356