BLASTX nr result
ID: Panax25_contig00025813
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax25_contig00025813
(477 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KVH97778.1 hypothetical protein Ccrd_000101 [Cynara cardunculus ... 162 5e-48
XP_016496953.1 PREDICTED: protein LSM12 homolog [Nicotiana tabacum] 156 1e-45
XP_004237256.1 PREDICTED: protein LSM12 homolog [Solanum lycoper... 156 1e-45
XP_016572891.1 PREDICTED: protein LSM12 homolog isoform X1 [Caps... 156 2e-45
XP_006340109.1 PREDICTED: protein LSM12 homolog [Solanum tuberosum] 155 3e-45
XP_009798322.1 PREDICTED: protein LSM12 homolog [Nicotiana sylve... 154 5e-45
XP_011086506.1 PREDICTED: protein LSM12 homolog A [Sesamum indicum] 154 1e-44
OMO57344.1 hypothetical protein CCACVL1_25818 [Corchorus capsula... 153 1e-44
XP_019229020.1 PREDICTED: protein LSM12 homolog [Nicotiana atten... 153 2e-44
CDP00201.1 unnamed protein product [Coffea canephora] 152 4e-44
XP_017621294.1 PREDICTED: protein LSM12 homolog [Gossypium arbor... 151 7e-44
XP_016743418.1 PREDICTED: protein LSM12 homolog [Gossypium hirsu... 151 1e-43
XP_012467054.1 PREDICTED: protein LSM12 homolog [Gossypium raimo... 151 1e-43
XP_008339997.1 PREDICTED: protein LSM12 homolog [Malus domestica] 151 1e-43
XP_010272019.1 PREDICTED: protein LSM12 homolog A [Nelumbo nucif... 150 2e-43
XP_008245217.1 PREDICTED: protein LSM12 homolog [Prunus mume] 150 2e-43
XP_017232601.1 PREDICTED: uncharacterized protein LOC108206724 [... 150 2e-43
XP_018813301.1 PREDICTED: protein LSM12 homolog [Juglans regia] 150 3e-43
XP_004297659.1 PREDICTED: protein LSM12 homolog A-like [Fragaria... 150 3e-43
XP_004135229.1 PREDICTED: protein LSM12 homolog A [Cucumis sativ... 150 3e-43
>KVH97778.1 hypothetical protein Ccrd_000101 [Cynara cardunculus var. scolymus]
Length = 183
Score = 162 bits (410), Expect = 5e-48
Identities = 82/91 (90%), Positives = 87/91 (95%)
Frame = -3
Query: 475 SKEHSAIRQAEIDSERIGVGVTAEAQSIFDALSKTLPVRWDKTVIVVMNEVRVSSPYISE 296
SKE +A+RQAEID ERIGVGVTAEAQSIFDALSKTLPVRWDKT IVVMNEVRVSSPY++E
Sbjct: 93 SKEEAAVRQAEIDVERIGVGVTAEAQSIFDALSKTLPVRWDKTAIVVMNEVRVSSPYLAE 152
Query: 295 SVTGGTPAANERVRKVLELERKRLQNRGAGQ 203
SVTGGTPAANERVRKVLELER+RLQ RGAGQ
Sbjct: 153 SVTGGTPAANERVRKVLELERRRLQTRGAGQ 183
>XP_016496953.1 PREDICTED: protein LSM12 homolog [Nicotiana tabacum]
Length = 179
Score = 156 bits (394), Expect = 1e-45
Identities = 80/91 (87%), Positives = 84/91 (92%)
Frame = -3
Query: 475 SKEHSAIRQAEIDSERIGVGVTAEAQSIFDALSKTLPVRWDKTVIVVMNEVRVSSPYISE 296
S+E SAIRQAEID+ER GVGVTAEAQ+IFDALSKTLPVRWDKTVIVVMNEVRVSSPY+ E
Sbjct: 89 SREDSAIRQAEIDAERFGVGVTAEAQTIFDALSKTLPVRWDKTVIVVMNEVRVSSPYLPE 148
Query: 295 SVTGGTPAANERVRKVLELERKRLQNRGAGQ 203
SVTGGTPAANERVRKVL LERKRLQ R GQ
Sbjct: 149 SVTGGTPAANERVRKVLVLERKRLQTRNTGQ 179
>XP_004237256.1 PREDICTED: protein LSM12 homolog [Solanum lycopersicum]
XP_015071733.1 PREDICTED: protein LSM12 homolog [Solanum
pennellii]
Length = 179
Score = 156 bits (394), Expect = 1e-45
Identities = 78/91 (85%), Positives = 85/91 (93%)
Frame = -3
Query: 475 SKEHSAIRQAEIDSERIGVGVTAEAQSIFDALSKTLPVRWDKTVIVVMNEVRVSSPYISE 296
S+E SA+RQAEID+ER G+GVTAEAQ+IFDALSKTLPVRWDKTVIVVMNEVRVSSPY+ E
Sbjct: 89 SREDSALRQAEIDAERFGIGVTAEAQNIFDALSKTLPVRWDKTVIVVMNEVRVSSPYLPE 148
Query: 295 SVTGGTPAANERVRKVLELERKRLQNRGAGQ 203
SV GGTPAANERVRKVLELERKRLQ+R GQ
Sbjct: 149 SVAGGTPAANERVRKVLELERKRLQSRNTGQ 179
>XP_016572891.1 PREDICTED: protein LSM12 homolog isoform X1 [Capsicum annuum]
Length = 192
Score = 156 bits (394), Expect = 2e-45
Identities = 78/91 (85%), Positives = 85/91 (93%)
Frame = -3
Query: 475 SKEHSAIRQAEIDSERIGVGVTAEAQSIFDALSKTLPVRWDKTVIVVMNEVRVSSPYISE 296
++E SAIRQAEID+ER G+GVTAEAQ+IFDALSKTLPVRWDKTVIVVMNEVRVSSPY+ E
Sbjct: 102 AREESAIRQAEIDAERFGIGVTAEAQNIFDALSKTLPVRWDKTVIVVMNEVRVSSPYLPE 161
Query: 295 SVTGGTPAANERVRKVLELERKRLQNRGAGQ 203
SV GGTPAANERVRKVLELERKRLQ R +GQ
Sbjct: 162 SVVGGTPAANERVRKVLELERKRLQTRNSGQ 192
>XP_006340109.1 PREDICTED: protein LSM12 homolog [Solanum tuberosum]
Length = 179
Score = 155 bits (391), Expect = 3e-45
Identities = 77/91 (84%), Positives = 85/91 (93%)
Frame = -3
Query: 475 SKEHSAIRQAEIDSERIGVGVTAEAQSIFDALSKTLPVRWDKTVIVVMNEVRVSSPYISE 296
++E SA+RQAEID+ER G+GVTAEAQ+IFDALSKTLPVRWDKTVIVVMNEVRVSSPY+ E
Sbjct: 89 AREDSALRQAEIDAERFGIGVTAEAQNIFDALSKTLPVRWDKTVIVVMNEVRVSSPYLPE 148
Query: 295 SVTGGTPAANERVRKVLELERKRLQNRGAGQ 203
SV GGTPAANERVRKVLELERKRLQ+R GQ
Sbjct: 149 SVAGGTPAANERVRKVLELERKRLQSRNTGQ 179
>XP_009798322.1 PREDICTED: protein LSM12 homolog [Nicotiana sylvestris]
Length = 179
Score = 154 bits (390), Expect = 5e-45
Identities = 79/91 (86%), Positives = 84/91 (92%)
Frame = -3
Query: 475 SKEHSAIRQAEIDSERIGVGVTAEAQSIFDALSKTLPVRWDKTVIVVMNEVRVSSPYISE 296
S+E SAIRQA+ID+ER GVGVTAEAQ+IFDALSKTLPVRWDKTVIVVMNEVRVSSPY+ E
Sbjct: 89 SREDSAIRQAQIDAERFGVGVTAEAQTIFDALSKTLPVRWDKTVIVVMNEVRVSSPYLPE 148
Query: 295 SVTGGTPAANERVRKVLELERKRLQNRGAGQ 203
SVTGGTPAANERVRKVL LERKRLQ R GQ
Sbjct: 149 SVTGGTPAANERVRKVLVLERKRLQTRNIGQ 179
>XP_011086506.1 PREDICTED: protein LSM12 homolog A [Sesamum indicum]
Length = 181
Score = 154 bits (388), Expect = 1e-44
Identities = 77/91 (84%), Positives = 84/91 (92%)
Frame = -3
Query: 475 SKEHSAIRQAEIDSERIGVGVTAEAQSIFDALSKTLPVRWDKTVIVVMNEVRVSSPYISE 296
++E SAIRQAE D+ERIGVGVTAEAQS+FDALSKTLPVRWDKT IVVMNEVRVSSPY+ E
Sbjct: 91 AREESAIRQAEADAERIGVGVTAEAQSLFDALSKTLPVRWDKTTIVVMNEVRVSSPYLPE 150
Query: 295 SVTGGTPAANERVRKVLELERKRLQNRGAGQ 203
SVTGGTPAANERVRKVLE E+KRLQ+R GQ
Sbjct: 151 SVTGGTPAANERVRKVLEFEKKRLQSRNLGQ 181
>OMO57344.1 hypothetical protein CCACVL1_25818 [Corchorus capsularis]
OMO89878.1 hypothetical protein COLO4_19542 [Corchorus
olitorius]
Length = 175
Score = 153 bits (387), Expect = 1e-44
Identities = 77/91 (84%), Positives = 85/91 (93%)
Frame = -3
Query: 475 SKEHSAIRQAEIDSERIGVGVTAEAQSIFDALSKTLPVRWDKTVIVVMNEVRVSSPYISE 296
++E SAIRQAE DSERIGVGVT+EAQS+FDALSKTLPVRWDKTVIVVMNEVRVSSPY+ E
Sbjct: 85 AREDSAIRQAEADSERIGVGVTSEAQSLFDALSKTLPVRWDKTVIVVMNEVRVSSPYLPE 144
Query: 295 SVTGGTPAANERVRKVLELERKRLQNRGAGQ 203
SV+GGTPAANERV+KVLE ERKR+Q RGA Q
Sbjct: 145 SVSGGTPAANERVKKVLEFERKRMQARGASQ 175
>XP_019229020.1 PREDICTED: protein LSM12 homolog [Nicotiana attenuata]
Length = 179
Score = 153 bits (386), Expect = 2e-44
Identities = 79/91 (86%), Positives = 83/91 (91%)
Frame = -3
Query: 475 SKEHSAIRQAEIDSERIGVGVTAEAQSIFDALSKTLPVRWDKTVIVVMNEVRVSSPYISE 296
S+E SAIRQAEID+ER GVGVTAEAQ+IFDALSKTLPVRWDKTVIVVMNEVRV+SPY E
Sbjct: 89 SREDSAIRQAEIDAERFGVGVTAEAQTIFDALSKTLPVRWDKTVIVVMNEVRVNSPYRPE 148
Query: 295 SVTGGTPAANERVRKVLELERKRLQNRGAGQ 203
SVTGGTPAANERVRKVL LERKRLQ R GQ
Sbjct: 149 SVTGGTPAANERVRKVLVLERKRLQTRNTGQ 179
>CDP00201.1 unnamed protein product [Coffea canephora]
Length = 188
Score = 152 bits (385), Expect = 4e-44
Identities = 76/91 (83%), Positives = 83/91 (91%)
Frame = -3
Query: 475 SKEHSAIRQAEIDSERIGVGVTAEAQSIFDALSKTLPVRWDKTVIVVMNEVRVSSPYISE 296
++E SAIRQAE+++ER G+GVTAEAQSIFDALSKTLPVRWDKT IVVMNEVRVSSPY+ E
Sbjct: 98 AREDSAIRQAELEAERFGIGVTAEAQSIFDALSKTLPVRWDKTTIVVMNEVRVSSPYLPE 157
Query: 295 SVTGGTPAANERVRKVLELERKRLQNRGAGQ 203
SV GGTPAANERVRKVLE ERKRLQ R AGQ
Sbjct: 158 SVVGGTPAANERVRKVLEFERKRLQTRSAGQ 188
>XP_017621294.1 PREDICTED: protein LSM12 homolog [Gossypium arboreum] KHG27703.1
Protein LSM12 A [Gossypium arboreum]
Length = 175
Score = 151 bits (382), Expect = 7e-44
Identities = 75/91 (82%), Positives = 84/91 (92%)
Frame = -3
Query: 475 SKEHSAIRQAEIDSERIGVGVTAEAQSIFDALSKTLPVRWDKTVIVVMNEVRVSSPYISE 296
++E SAIRQAE DSER GVGVT+EAQ++FDALSKTLPVRWDKTVIVVMNEVRVSSPY+ E
Sbjct: 85 AREDSAIRQAEADSERFGVGVTSEAQTLFDALSKTLPVRWDKTVIVVMNEVRVSSPYLPE 144
Query: 295 SVTGGTPAANERVRKVLELERKRLQNRGAGQ 203
SV+GGTPAANERVRKVLE ERKR+Q RG+ Q
Sbjct: 145 SVSGGTPAANERVRKVLEFERKRMQTRGSSQ 175
>XP_016743418.1 PREDICTED: protein LSM12 homolog [Gossypium hirsutum]
Length = 175
Score = 151 bits (381), Expect = 1e-43
Identities = 75/91 (82%), Positives = 83/91 (91%)
Frame = -3
Query: 475 SKEHSAIRQAEIDSERIGVGVTAEAQSIFDALSKTLPVRWDKTVIVVMNEVRVSSPYISE 296
++E SAIRQAE DSER GVGVT+EAQ++FDALSKTLPVRWDKTVIVVMNEVRVSSPY+ E
Sbjct: 85 AREDSAIRQAEADSERFGVGVTSEAQTLFDALSKTLPVRWDKTVIVVMNEVRVSSPYLPE 144
Query: 295 SVTGGTPAANERVRKVLELERKRLQNRGAGQ 203
SV+GGTPAANERVRKVLE ERKR+Q RG Q
Sbjct: 145 SVSGGTPAANERVRKVLEFERKRMQTRGTSQ 175
>XP_012467054.1 PREDICTED: protein LSM12 homolog [Gossypium raimondii]
XP_016753237.1 PREDICTED: protein LSM12 homolog
[Gossypium hirsutum] KJB15060.1 hypothetical protein
B456_002G161300 [Gossypium raimondii]
Length = 175
Score = 151 bits (381), Expect = 1e-43
Identities = 75/91 (82%), Positives = 83/91 (91%)
Frame = -3
Query: 475 SKEHSAIRQAEIDSERIGVGVTAEAQSIFDALSKTLPVRWDKTVIVVMNEVRVSSPYISE 296
++E SAIRQAE DSER GVGVT+EAQ++FDALSKTLPVRWDKTVIVVMNEVRVSSPY+ E
Sbjct: 85 AREDSAIRQAEADSERFGVGVTSEAQTLFDALSKTLPVRWDKTVIVVMNEVRVSSPYLPE 144
Query: 295 SVTGGTPAANERVRKVLELERKRLQNRGAGQ 203
SV+GGTPAANERVRKVLE ERKR+Q RG Q
Sbjct: 145 SVSGGTPAANERVRKVLEFERKRMQTRGTSQ 175
>XP_008339997.1 PREDICTED: protein LSM12 homolog [Malus domestica]
Length = 180
Score = 151 bits (381), Expect = 1e-43
Identities = 76/91 (83%), Positives = 84/91 (92%)
Frame = -3
Query: 475 SKEHSAIRQAEIDSERIGVGVTAEAQSIFDALSKTLPVRWDKTVIVVMNEVRVSSPYISE 296
++E AIRQAE +SERIGVGVTA+AQ+IFDALSKTLPVRWDKTVIVVMNEVRVSSPY E
Sbjct: 90 AREELAIRQAEAESERIGVGVTAQAQNIFDALSKTLPVRWDKTVIVVMNEVRVSSPYTPE 149
Query: 295 SVTGGTPAANERVRKVLELERKRLQNRGAGQ 203
SV+GGTPAANERV+KVLELER+RLQ RG GQ
Sbjct: 150 SVSGGTPAANERVKKVLELERRRLQTRGGGQ 180
>XP_010272019.1 PREDICTED: protein LSM12 homolog A [Nelumbo nucifera]
Length = 179
Score = 150 bits (380), Expect = 2e-43
Identities = 75/88 (85%), Positives = 84/88 (95%)
Frame = -3
Query: 475 SKEHSAIRQAEIDSERIGVGVTAEAQSIFDALSKTLPVRWDKTVIVVMNEVRVSSPYISE 296
++E SAIRQAEI++ERIGVGVT+EAQSIFDALSKTLPV WDKT IVVMNEVRVSSPY+ E
Sbjct: 90 AREESAIRQAEIEAERIGVGVTSEAQSIFDALSKTLPVHWDKTAIVVMNEVRVSSPYLPE 149
Query: 295 SVTGGTPAANERVRKVLELERKRLQNRG 212
+VTGGTPAANERV+KVLELERKRLQ+RG
Sbjct: 150 NVTGGTPAANERVKKVLELERKRLQSRG 177
>XP_008245217.1 PREDICTED: protein LSM12 homolog [Prunus mume]
Length = 180
Score = 150 bits (380), Expect = 2e-43
Identities = 76/91 (83%), Positives = 84/91 (92%)
Frame = -3
Query: 475 SKEHSAIRQAEIDSERIGVGVTAEAQSIFDALSKTLPVRWDKTVIVVMNEVRVSSPYISE 296
++E AIRQAE DSERIGVGVT++AQ+IFDALSKTLPVRWDKTVIVVMN VRVSSPY E
Sbjct: 90 AREELAIRQAEADSERIGVGVTSQAQNIFDALSKTLPVRWDKTVIVVMNAVRVSSPYTPE 149
Query: 295 SVTGGTPAANERVRKVLELERKRLQNRGAGQ 203
SV+GGTPAANERV+KVLELERKRLQ RG+GQ
Sbjct: 150 SVSGGTPAANERVKKVLELERKRLQTRGSGQ 180
>XP_017232601.1 PREDICTED: uncharacterized protein LOC108206724 [Daucus carota
subsp. sativus]
Length = 192
Score = 150 bits (380), Expect = 2e-43
Identities = 78/84 (92%), Positives = 78/84 (92%)
Frame = -3
Query: 454 RQAEIDSERIGVGVTAEAQSIFDALSKTLPVRWDKTVIVVMNEVRVSSPYISESVTGGTP 275
RQAEIDSERIGVGVT EAQSIFDALSKTLPVRWDKTVIVVMNEVRVSSPY SE VTGGTP
Sbjct: 109 RQAEIDSERIGVGVTPEAQSIFDALSKTLPVRWDKTVIVVMNEVRVSSPYTSERVTGGTP 168
Query: 274 AANERVRKVLELERKRLQNRGAGQ 203
AANERVRKVLELERKRLQNR Q
Sbjct: 169 AANERVRKVLELERKRLQNRSPAQ 192
>XP_018813301.1 PREDICTED: protein LSM12 homolog [Juglans regia]
Length = 181
Score = 150 bits (378), Expect = 3e-43
Identities = 75/91 (82%), Positives = 83/91 (91%)
Frame = -3
Query: 475 SKEHSAIRQAEIDSERIGVGVTAEAQSIFDALSKTLPVRWDKTVIVVMNEVRVSSPYISE 296
++E AIRQAE ++ERIGVGVT+EAQSIFDALSKTLPVRWDKTVIVV+NEVRVSSPY+ E
Sbjct: 91 AREDLAIRQAEAEAERIGVGVTSEAQSIFDALSKTLPVRWDKTVIVVLNEVRVSSPYLPE 150
Query: 295 SVTGGTPAANERVRKVLELERKRLQNRGAGQ 203
SV GGTPAANERV+KVLE ERKRLQ RG GQ
Sbjct: 151 SVNGGTPAANERVKKVLEFERKRLQTRGGGQ 181
>XP_004297659.1 PREDICTED: protein LSM12 homolog A-like [Fragaria vesca subsp.
vesca]
Length = 181
Score = 150 bits (378), Expect = 3e-43
Identities = 74/91 (81%), Positives = 84/91 (92%)
Frame = -3
Query: 475 SKEHSAIRQAEIDSERIGVGVTAEAQSIFDALSKTLPVRWDKTVIVVMNEVRVSSPYISE 296
++E SAIRQAE D ERIGVGVT +AQ+IFDALSKTLPVRWDKTVIVVMNEVRVSSPY+ E
Sbjct: 91 AREESAIRQAEADCERIGVGVTGQAQNIFDALSKTLPVRWDKTVIVVMNEVRVSSPYLPE 150
Query: 295 SVTGGTPAANERVRKVLELERKRLQNRGAGQ 203
SV+GGTPAAN+RV+KVLELER+RLQ RG G+
Sbjct: 151 SVSGGTPAANDRVKKVLELERRRLQTRGGGR 181
>XP_004135229.1 PREDICTED: protein LSM12 homolog A [Cucumis sativus] KGN51830.1
hypothetical protein Csa_5G603270 [Cucumis sativus]
Length = 181
Score = 150 bits (378), Expect = 3e-43
Identities = 76/91 (83%), Positives = 84/91 (92%)
Frame = -3
Query: 475 SKEHSAIRQAEIDSERIGVGVTAEAQSIFDALSKTLPVRWDKTVIVVMNEVRVSSPYISE 296
++E AIRQAE ++ERIGVGVT+EAQSIFDALSKTLPVRWDKTVIVVMNEVRVSSPY+ E
Sbjct: 91 AREELAIRQAEAEAERIGVGVTSEAQSIFDALSKTLPVRWDKTVIVVMNEVRVSSPYLPE 150
Query: 295 SVTGGTPAANERVRKVLELERKRLQNRGAGQ 203
SV+GGTPAANERV+KVLE ERKRLQ RG GQ
Sbjct: 151 SVSGGTPAANERVKKVLEWERKRLQVRGGGQ 181