BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00025810
         (4478 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017232532.1 PREDICTED: DNA-directed RNA polymerase IV subunit...  1984   0.0  
XP_017232529.1 PREDICTED: DNA-directed RNA polymerase IV subunit...  1980   0.0  
XP_017236034.1 PREDICTED: DNA-directed RNA polymerase IV subunit...  1935   0.0  
XP_017236029.1 PREDICTED: DNA-directed RNA polymerase IV subunit...  1930   0.0  
XP_010661369.1 PREDICTED: DNA-directed RNA polymerase IV subunit...  1642   0.0  
XP_010661365.1 PREDICTED: DNA-directed RNA polymerase IV subunit...  1636   0.0  
CDP09818.1 unnamed protein product [Coffea canephora]                1613   0.0  
XP_009797463.1 PREDICTED: DNA-directed RNA polymerase IV subunit...  1597   0.0  
XP_019231702.1 PREDICTED: DNA-directed RNA polymerase IV subunit...  1596   0.0  
XP_006358858.1 PREDICTED: DNA-directed RNA polymerase IV subunit...  1596   0.0  
XP_019156683.1 PREDICTED: DNA-directed RNA polymerase IV subunit...  1594   0.0  
XP_018624246.1 PREDICTED: DNA-directed RNA polymerase IV subunit...  1588   0.0  
XP_016440347.1 PREDICTED: DNA-directed RNA polymerase IV subunit...  1587   0.0  
XP_019156687.1 PREDICTED: DNA-directed RNA polymerase IV subunit...  1586   0.0  
XP_018820498.1 PREDICTED: DNA-directed RNA polymerase IV subunit...  1573   0.0  
XP_018820497.1 PREDICTED: DNA-directed RNA polymerase IV subunit...  1573   0.0  
XP_004245657.1 PREDICTED: DNA-directed RNA polymerase IV subunit...  1572   0.0  
XP_015085574.1 PREDICTED: DNA-directed RNA polymerase IV subunit...  1571   0.0  
XP_016567800.1 PREDICTED: DNA-directed RNA polymerase IV subunit...  1547   0.0  
XP_016567789.1 PREDICTED: DNA-directed RNA polymerase IV subunit...  1546   0.0  

>XP_017232532.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
            [Daucus carota subsp. sativus]
          Length = 1440

 Score = 1984 bits (5140), Expect = 0.0
 Identities = 1004/1450 (69%), Positives = 1168/1450 (80%), Gaps = 5/1450 (0%)
 Frame = -3

Query: 4347 MDTEYVEQQVPLGFLTGMEFNIVTEEDAEKISVKEIGAANDVTHPMLGLPNPTSSQCLTC 4168
            M  +  EQ V  GF+TG++F+I+TE+DAE ISVKEI   NDV HPMLGLPN TSSQCLTC
Sbjct: 1    MGHDQEEQVVTTGFVTGIKFDILTEKDAEMISVKEIEVPNDVVHPMLGLPNQTSSQCLTC 60

Query: 4167 DAKDVKTCEGHFGLIKFPFTILHPYFISDVAKVLNRICPGCKSVRRRVKSASPTSTHHRP 3988
            +A+DVKTCEGHFGLI  P+TILHPY ISDVAK+LN+IC GCKS R R KSA  +STH +P
Sbjct: 61   EAEDVKTCEGHFGLINLPYTILHPYLISDVAKILNKICVGCKSERSRAKSADSSSTHKKP 120

Query: 3987 VP-----CKYCDVHLKNKYPRMNFKVSTKEIFGRTAIFAQINERLWIKSLSLASDYWDFI 3823
                   CKYCD   K++YPR  FKVS+KE+FGRTAIFA+IN+R++ +  +LASDYW+F+
Sbjct: 121  THKKRERCKYCDGLRKDEYPRTIFKVSSKEVFGRTAIFAKINDRVFSRIETLASDYWNFL 180

Query: 3822 PNDPQQEENSLQPNKRVLSHLQVYHLLKDVDPRLLKDFVQDNKNSMFLSSFPVTPNSHRV 3643
              D QQ  N+L+PN+RVLSHLQV+ LLK+VDP+++K+FV+D K+ +F+++FPVTPNSHRV
Sbjct: 181  AEDTQQAGNALKPNERVLSHLQVHELLKEVDPKIVKEFVKDKKDLIFMNNFPVTPNSHRV 240

Query: 3642 NEFGQHMRFDERTRAYRKLVDFRGSANELSTRVLDCLKISKLRSEKSSSKAYAPKMFIQN 3463
            NEFG  +RFDE TR YRKL +F GSANELSTRVLDC K+ KLRSEK S+K     MF QN
Sbjct: 241  NEFGGQVRFDELTRCYRKLANFEGSANELSTRVLDCFKMCKLRSEKVSTK-----MFNQN 295

Query: 3462 EDAAPKMSGLKYIKELILGKRTDHAFRMVVVGDPNIKVDEIGVPRHIAEAMQVSERLNSR 3283
            E+AAP +SGL++IKELILGKR+DH FRMVVVGDP IKVDEIGVP HIA++MQ+SE+LNS 
Sbjct: 296  EEAAPNLSGLRFIKELILGKRSDHTFRMVVVGDPRIKVDEIGVPSHIADSMQISEQLNSL 355

Query: 3282 NWTTLGVRILAKGRTFIRREGGLVRVTLQNDTLQVGDTIYRPLRDRDIVLINRPPSIHPH 3103
            NW +LG++IL K  T+IRR+G L RVT+++D L++GDT++RPLRDRDIVLINRPPSIH H
Sbjct: 356  NWESLGLKILRKRDTYIRRDGRLARVTIKDDKLRIGDTVHRPLRDRDIVLINRPPSIHSH 415

Query: 3102 SLIALHVKILPINSVLSLNPLICSPFRGDFDGDCYHGYVPQSVDSRVELHELVALNKQLI 2923
            SLIAL VKILP NS+LSLNPLICSPFRGDFDGDCYHG++PQSVDSRVEL ELVALNKQL 
Sbjct: 416  SLIALSVKILPTNSILSLNPLICSPFRGDFDGDCYHGFIPQSVDSRVELQELVALNKQLT 475

Query: 2922 NGQTGQNLLSLSHDSLTAAQLVIEDGVLLDRFQMQQLQMFCTCPQQLQFPAVVKVPSPNN 2743
            N Q G NL+SL+ DSLTAAQLVIEDGVLL+R QMQQLQMFC    QLQ PA+VK  S  N
Sbjct: 476  NIQNGLNLISLTQDSLTAAQLVIEDGVLLNRSQMQQLQMFCPRSCQLQAPAIVKASSRKN 535

Query: 2742 YSNATSSDSCLWTGKQLFSLLLPPDFHYDFPSTGVHVSKGEVISSTGASSWLCDTNENLL 2563
               A SSD+ LWTGKQLFSLLLP DF YD PS+ V + KGE+ISS  ASSWL DT  NLL
Sbjct: 536  CLKAASSDTFLWTGKQLFSLLLPQDFSYDCPSSAVKIMKGELISSKTASSWLRDTKGNLL 595

Query: 2562 YRLVKHCQEEFLDFLNAAQGVLCEWLSMRGXXXXXXXXXXXXXXXSRKNMIDEVSCALRE 2383
            Y L+ HCQ EFLDFL+AAQGVL EWL MRG                RKNMIDEVSC LRE
Sbjct: 596  YSLISHCQGEFLDFLHAAQGVLSEWLFMRGLSVSLADMYLSSDSHCRKNMIDEVSCGLRE 655

Query: 2382 AEHVSHIKLLMVDSNQDFLIGSFQESESSKDFGVDHMFYERQKSAALSQVSVSAFKQVFR 2203
            AE +S +KLLMVDSN DFL+GS +ESE++ DFG  HMF +RQKS AL QVSVSAFKQVF 
Sbjct: 656  AELISSVKLLMVDSNLDFLVGSLEESETAMDFGAKHMFCDRQKSPALIQVSVSAFKQVFS 715

Query: 2202 DIQNLFYQYANEDNSFLAMLKAGSKKSNLTRAVQHGMCLGLQHSLVPLSFRIPRQLSCAA 2023
             IQNLFYQYA+EDNSFLAM+KAGSKKSNLT+AVQH MCLGLQHSLV LSFRIP++LSC A
Sbjct: 716  KIQNLFYQYASEDNSFLAMIKAGSKKSNLTKAVQHAMCLGLQHSLVSLSFRIPQELSCEA 775

Query: 2022 WNSQKTLDSLNIAHDHPEYTKSYIPYAVVPSSFLTGLNPLECFVHSLTTRDSSFGGHADI 1843
            WNSQK  +S++   DH + +KSYIPYAVV SSFL+GLNPLE FVHSLTTRD+SFGGHADI
Sbjct: 776  WNSQKEEESIDPKDDHSKISKSYIPYAVVQSSFLSGLNPLESFVHSLTTRDASFGGHADI 835

Query: 1842 SGTLTRRLMFFMRDLCIRYDGTVRNAYGNQVVQFSYNSKASSPNNNPDGSLNDSAYACAM 1663
            SGTLTRR+MFFMRDLC+ YDGTVR+AYGNQVVQFSY +  +S  N+P+  L D A  C M
Sbjct: 836  SGTLTRRIMFFMRDLCMGYDGTVRSAYGNQVVQFSYYNNPTSSKNSPEEKLTDGA--CTM 893

Query: 1662 GGQPVGXXXXXXXXXXXXXALDQPISALEASPLLNLKEILECGGNKRNNTISLFLSKKLR 1483
            GGQPVG             ALD PISALEASPLLNLKEILECG NK N T SLF SKKL 
Sbjct: 894  GGQPVGSWAACAISEAAYSALDLPISALEASPLLNLKEILECGNNKVNKTASLFFSKKLE 953

Query: 1482 RWAHGFEYGALEVKSHLERVQLLDIVSTVMIMFSPKTSRHTLPWVCHFHISKDMVKRKQI 1303
            RW +GFEY ALEVKS LER+Q LDIVSTVMIM+SP    +  PWVC FHI+K++ KRKQ+
Sbjct: 954  RWTYGFEYAALEVKSRLERLQFLDIVSTVMIMYSPCREAYVSPWVCQFHINKELAKRKQV 1013

Query: 1302 IVQSIIDALCMKCKSTQLKSKVYFPNLQITSKDCSEGNDATICITVSIVRSSKNSSIQLD 1123
             VQSI+ AL MKC ST +KSKV  P+LQIT  D SE N ATICI + +V   +NSS QL+
Sbjct: 1014 KVQSIVKALYMKCNSTLVKSKVDLPDLQITCNDSSEKNMATICINIRMVGIDENSSTQLE 1073

Query: 1122 TLKETVIPFLLGTVIKGSSNVKKVDILWKDPPNVSTSHKGSSGELYLRVFMSETCDRTRF 943
            TL++ V+PFLL TVIKGSSNVKKVDILWKD  ++STSHKG+SGELY+RV MS TCDR+RF
Sbjct: 1074 TLEDMVLPFLLQTVIKGSSNVKKVDILWKDSSSLSTSHKGASGELYIRVHMSATCDRSRF 1133

Query: 942  WGVLMDDCLQLMDMIDWKRSHPEDIHAATLALGIDVARKLFLSKLESAISDTGKTILPEH 763
            W VLM+DCLQ+MDMIDWKRS+P+DI AAT ALGID A+  F++KL SAISDTGK +LPEH
Sbjct: 1134 WTVLMNDCLQIMDMIDWKRSYPDDIQAATSALGIDFAKSQFINKLASAISDTGKAVLPEH 1193

Query: 762  LLLVSDCLSSTGEYVALSANGLARQRKQTSVSSPFTQACFSSPADCFVNAAKMGIVDDLQ 583
            L LV+DCLS TGE+VALSANGLARQRKQTSVSSPFTQACFSSPADCFVNA KMG++D+LQ
Sbjct: 1194 LYLVADCLSCTGEFVALSANGLARQRKQTSVSSPFTQACFSSPADCFVNAGKMGMMDNLQ 1253

Query: 582  GSLDALSWGNTPSLGTGGQFDILYSGKGHEPDKPENIYNLLGSHINGHEQNVKLPDEGNS 403
            GSLD+L+WGN PSLGTG QFDILYS K HE  KPE+IYNLLGS +    Q VK+      
Sbjct: 1254 GSLDSLAWGNPPSLGTGAQFDILYSRKDHEVAKPEDIYNLLGSQVGARGQRVKVSRTHTD 1313

Query: 402  MSIKYLAKEGEILRKHFNANHFWWMSKKLKDILRNYDINQQLSDLDEKMVTVALYFHPRS 223
            MSIK LAK  ++LRK F A +F  MS++L+ IL  Y INQQLS+LDE +V  AL+FHPRS
Sbjct: 1314 MSIKNLAKRSDLLRKDFKAKYFLSMSEELRLILHKYKINQQLSELDESIVVAALFFHPRS 1373

Query: 222  IEKIGSGPQEIKIGLSSKGGNSRCFQLVRTDGSVEEFSYHKCIHHALELINPESAAEYQS 43
             EKIGSG +EIKIG SSK   SRCF +VRTDG++E+FSYHKCIH+ L+LI P+SA  Y  
Sbjct: 1374 SEKIGSGLKEIKIGGSSKSSTSRCFHVVRTDGTIEDFSYHKCIHNGLKLIAPKSAETY-- 1431

Query: 42   LRSRWLNRRI 13
             RSRWLN R+
Sbjct: 1432 -RSRWLNGRV 1440


>XP_017232529.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
            [Daucus carota subsp. sativus] XP_017232530.1 PREDICTED:
            DNA-directed RNA polymerase IV subunit 1-like isoform X1
            [Daucus carota subsp. sativus] XP_017232531.1 PREDICTED:
            DNA-directed RNA polymerase IV subunit 1-like isoform X1
            [Daucus carota subsp. sativus]
          Length = 1441

 Score = 1980 bits (5130), Expect = 0.0
 Identities = 1004/1451 (69%), Positives = 1169/1451 (80%), Gaps = 6/1451 (0%)
 Frame = -3

Query: 4347 MDTEYVEQQVPLGFLTGMEFNIVTEEDAEKISVKEIGAANDVTHPMLGLPNPTSSQCLTC 4168
            M  +  EQ V  GF+TG++F+I+TE+DAE ISVKEI   NDV HPMLGLPN TSSQCLTC
Sbjct: 1    MGHDQEEQVVTTGFVTGIKFDILTEKDAEMISVKEIEVPNDVVHPMLGLPNQTSSQCLTC 60

Query: 4167 DAKDVKTCEGHFGLIKFPFTILHPYFISDVAKVLNRICPGCKSVRRRVKSASPTSTHHRP 3988
            +A+DVKTCEGHFGLI  P+TILHPY ISDVAK+LN+IC GCKS R R KSA  +STH +P
Sbjct: 61   EAEDVKTCEGHFGLINLPYTILHPYLISDVAKILNKICVGCKSERSRAKSADSSSTHKKP 120

Query: 3987 VP-----CKYCDVHLKNKYPRMNFKVSTKEIFGRTAIFAQINERLWIKSLSLASDYWDFI 3823
                   CKYCD   K++YPR  FKVS+KE+FGRTAIFA+IN+R++ +  +LASDYW+F+
Sbjct: 121  THKKRERCKYCDGLRKDEYPRTIFKVSSKEVFGRTAIFAKINDRVFSRIETLASDYWNFL 180

Query: 3822 PNDPQQEENSLQPNKRVLSHLQVYHLLKDVDPRLLKDFVQDNKNSMFLSSFPVTPNSHRV 3643
              D QQ  N+L+PN+RVLSHLQV+ LLK+VDP+++K+FV+D K+ +F+++FPVTPNSHRV
Sbjct: 181  AEDTQQAGNALKPNERVLSHLQVHELLKEVDPKIVKEFVKDKKDLIFMNNFPVTPNSHRV 240

Query: 3642 NEFGQHMRFDERTRAYRKLVDFRGSANELSTRVLDCLKISKLRSEKSSSKAYAPKMFIQN 3463
            NEFG  +RFDE TR YRKL +F GSANELSTRVLDC K+ KLRSEK S+K     MF QN
Sbjct: 241  NEFGGQVRFDELTRCYRKLANFEGSANELSTRVLDCFKMCKLRSEKVSTK-----MFNQN 295

Query: 3462 EDAAPKMSGLKYIKELILGKRTDHAFRMVVVGDPNIKVDEIGVPRHIAEAMQVSERLNSR 3283
            E+AAP +SGL++IKELILGKR+DH FRMVVVGDP IKVDEIGVP HIA++MQ+SE+LNS 
Sbjct: 296  EEAAPNLSGLRFIKELILGKRSDHTFRMVVVGDPRIKVDEIGVPSHIADSMQISEQLNSL 355

Query: 3282 NWTTLGVRILAKGRTFIRREGGLVRVTLQNDTLQVGDTIYRPLRDRDIVLINRPPSIHPH 3103
            NW +LG++IL K  T+IRR+G L RVT+++D L++GDT++RPLRDRDIVLINRPPSIH H
Sbjct: 356  NWESLGLKILRKRDTYIRRDGRLARVTIKDDKLRIGDTVHRPLRDRDIVLINRPPSIHSH 415

Query: 3102 SLIALHVKILPINSVLSLNPLICSPFRGDFDGDCYHGYVPQSVDSRVELHELVALNKQLI 2923
            SLIAL VKILP NS+LSLNPLICSPFRGDFDGDCYHG++PQSVDSRVEL ELVALNKQL 
Sbjct: 416  SLIALSVKILPTNSILSLNPLICSPFRGDFDGDCYHGFIPQSVDSRVELQELVALNKQLT 475

Query: 2922 NGQTGQNLLSLSHDSLTAAQLVIEDGVLLDRFQMQQLQMFCTCPQQLQFPAVVKVPSPNN 2743
            N Q G NL+SL+ DSLTAAQLVIEDGVLL+R QMQQLQMFC    QLQ PA+VK  S  N
Sbjct: 476  NIQNGLNLISLTQDSLTAAQLVIEDGVLLNRSQMQQLQMFCPRSCQLQAPAIVKASSRKN 535

Query: 2742 YSNATSSDSCLWTGKQLFSLLLPPDFHYDFPSTGVHVSKGEVISSTGASSWLCDTNENLL 2563
               A SSD+ LWTGKQLFSLLLP DF YD PS+ V + KGE+ISS  ASSWL DT  NLL
Sbjct: 536  CLKAASSDTFLWTGKQLFSLLLPQDFSYDCPSSAVKIMKGELISSKTASSWLRDTKGNLL 595

Query: 2562 YRLVKHCQEEFLDFLNAAQGVLCEWLSMRGXXXXXXXXXXXXXXXSRKNMIDEVSCALRE 2383
            Y L+ HCQ EFLDFL+AAQGVL EWL MRG                RKNMIDEVSC LRE
Sbjct: 596  YSLISHCQGEFLDFLHAAQGVLSEWLFMRGLSVSLADMYLSSDSHCRKNMIDEVSCGLRE 655

Query: 2382 AEHVSHIKLLMVDSNQDFLIGSFQESESSKDFGVDHMFYERQKSAALSQVSVSAFKQVFR 2203
            AE +S +KLLMVDSN DFL+GS +ESE++ DFG  HMF +RQKS AL QVSVSAFKQVF 
Sbjct: 656  AELISSVKLLMVDSNLDFLVGSLEESETAMDFGAKHMFCDRQKSPALIQVSVSAFKQVFS 715

Query: 2202 DIQNLFYQYANEDNSFLAMLKAGSKKSNLTRAVQHGMCLGLQHSLVPLSFRIPRQLSCAA 2023
             IQNLFYQYA+EDNSFLAM+KAGSKKSNLT+AVQH MCLGLQHSLV LSFRIP++LSC A
Sbjct: 716  KIQNLFYQYASEDNSFLAMIKAGSKKSNLTKAVQHAMCLGLQHSLVSLSFRIPQELSCEA 775

Query: 2022 WNSQKTLDSLNIAHDHPEYTKSYIPYAVVPSSFLTGLNPLECFVHSLTTRDSSFGGHADI 1843
            WNSQK  +S++   DH + +KSYIPYAVV SSFL+GLNPLE FVHSLTTRD+SFGGHADI
Sbjct: 776  WNSQKEEESIDPKDDHSKISKSYIPYAVVQSSFLSGLNPLESFVHSLTTRDASFGGHADI 835

Query: 1842 SGTLTRRLMFFMRDLCIRYDGTVRNAYGNQVVQFSYNSKASSPNNNPDGSLNDSAYACAM 1663
            SGTLTRR+MFFMRDLC+ YDGTVR+AYGNQVVQFSY +  +S  N+P+  L D A  C M
Sbjct: 836  SGTLTRRIMFFMRDLCMGYDGTVRSAYGNQVVQFSYYNNPTSSKNSPEEKLTDGA--CTM 893

Query: 1662 GGQPVGXXXXXXXXXXXXXALDQPISALEASPLLNLKEILECGGNKRNNTISLFLSKKLR 1483
            GGQPVG             ALD PISALEASPLLNLKEILECG NK N T SLF SKKL 
Sbjct: 894  GGQPVGSWAACAISEAAYSALDLPISALEASPLLNLKEILECGNNKVNKTASLFFSKKLE 953

Query: 1482 RWAHGFEYGALEVKSHLERVQLLDIVSTVMIMFSPKTSRHTLPWVCHFHISKDMVKRKQI 1303
            RW +GFEY ALEVKS LER+Q LDIVSTVMIM+SP    +  PWVC FHI+K++ KRKQ+
Sbjct: 954  RWTYGFEYAALEVKSRLERLQFLDIVSTVMIMYSPCREAYVSPWVCQFHINKELAKRKQV 1013

Query: 1302 IVQSIIDALCMKCKSTQLKSKVYFPNLQIT-SKDCSEGNDATICITVSIVRSSKNSSIQL 1126
             VQSI+ AL MKC ST +KSKV  P+LQIT + D SE N ATICI + +V   +NSS QL
Sbjct: 1014 KVQSIVKALYMKCNSTLVKSKVDLPDLQITCNSDSSEKNMATICINIRMVGIDENSSTQL 1073

Query: 1125 DTLKETVIPFLLGTVIKGSSNVKKVDILWKDPPNVSTSHKGSSGELYLRVFMSETCDRTR 946
            +TL++ V+PFLL TVIKGSSNVKKVDILWKD  ++STSHKG+SGELY+RV MS TCDR+R
Sbjct: 1074 ETLEDMVLPFLLQTVIKGSSNVKKVDILWKDSSSLSTSHKGASGELYIRVHMSATCDRSR 1133

Query: 945  FWGVLMDDCLQLMDMIDWKRSHPEDIHAATLALGIDVARKLFLSKLESAISDTGKTILPE 766
            FW VLM+DCLQ+MDMIDWKRS+P+DI AAT ALGID A+  F++KL SAISDTGK +LPE
Sbjct: 1134 FWTVLMNDCLQIMDMIDWKRSYPDDIQAATSALGIDFAKSQFINKLASAISDTGKAVLPE 1193

Query: 765  HLLLVSDCLSSTGEYVALSANGLARQRKQTSVSSPFTQACFSSPADCFVNAAKMGIVDDL 586
            HL LV+DCLS TGE+VALSANGLARQRKQTSVSSPFTQACFSSPADCFVNA KMG++D+L
Sbjct: 1194 HLYLVADCLSCTGEFVALSANGLARQRKQTSVSSPFTQACFSSPADCFVNAGKMGMMDNL 1253

Query: 585  QGSLDALSWGNTPSLGTGGQFDILYSGKGHEPDKPENIYNLLGSHINGHEQNVKLPDEGN 406
            QGSLD+L+WGN PSLGTG QFDILYS K HE  KPE+IYNLLGS +    Q VK+     
Sbjct: 1254 QGSLDSLAWGNPPSLGTGAQFDILYSRKDHEVAKPEDIYNLLGSQVGARGQRVKVSRTHT 1313

Query: 405  SMSIKYLAKEGEILRKHFNANHFWWMSKKLKDILRNYDINQQLSDLDEKMVTVALYFHPR 226
             MSIK LAK  ++LRK F A +F  MS++L+ IL  Y INQQLS+LDE +V  AL+FHPR
Sbjct: 1314 DMSIKNLAKRSDLLRKDFKAKYFLSMSEELRLILHKYKINQQLSELDESIVVAALFFHPR 1373

Query: 225  SIEKIGSGPQEIKIGLSSKGGNSRCFQLVRTDGSVEEFSYHKCIHHALELINPESAAEYQ 46
            S EKIGSG +EIKIG SSK   SRCF +VRTDG++E+FSYHKCIH+ L+LI P+SA  Y 
Sbjct: 1374 SSEKIGSGLKEIKIGGSSKSSTSRCFHVVRTDGTIEDFSYHKCIHNGLKLIAPKSAETY- 1432

Query: 45   SLRSRWLNRRI 13
              RSRWLN R+
Sbjct: 1433 --RSRWLNGRV 1441


>XP_017236034.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
            [Daucus carota subsp. sativus]
          Length = 1434

 Score = 1935 bits (5013), Expect = 0.0
 Identities = 987/1451 (68%), Positives = 1156/1451 (79%), Gaps = 6/1451 (0%)
 Frame = -3

Query: 4347 MDTEYVEQQVPLGFLTGMEFNIVTEEDAEKISVKEIGAANDVTHPMLGLPNPTSSQCLTC 4168
            MD + VEQ V  GFL+ + F IVT+ED EK+SVKEI   NDV HPMLG+P P SSQCLTC
Sbjct: 1    MDYDCVEQGVTSGFLSSINFGIVTDEDVEKVSVKEIEVPNDVIHPMLGIPTPMSSQCLTC 60

Query: 4167 DAKDVKTCEGHFGLIKFPFTILHPYFISDVAKVLNRICPGCKSVRRRVKSASPTSTHHRP 3988
            DAK+VKTCEGHFG IKFP+ +LHPYFISDV K+LNRIC  CKS R R KSAS  ST  +P
Sbjct: 61   DAKNVKTCEGHFGFIKFPYPVLHPYFISDVVKILNRICVKCKSERIRTKSASSPSTKRKP 120

Query: 3987 VP----CKYCDVHLKNKYPRMNFKVSTKEIFGRTAIFAQINERLWIKSLSLASDYWDFIP 3820
                  CKYCD   K++YPR  FKVS KE+F  T I A+INER   ++  +ASDYWDF+ 
Sbjct: 121  KRKRGCCKYCDGRSKDEYPRTIFKVSGKEMFESTVILARINERS--RTPRVASDYWDFLQ 178

Query: 3819 NDPQQEENSLQPNKRVLSHLQVYHLLKDVDPRLLKDFVQDNKNSMFLSSFPVTPNSHRVN 3640
            NDPQ E N+L+P++R+L++ QV  LLK +D R +KDFV+D KN + +++FPVTPNSHRVN
Sbjct: 179  NDPQ-EGNTLKPHERILTYTQVQELLKGIDLRFMKDFVKDEKNLLSMNNFPVTPNSHRVN 237

Query: 3639 EFGQHMRFDERTRAYRKLVDFRGSANELSTRVLDCLKISKLRSEKSSSKAYAPKMFIQNE 3460
            E GQ MRFDERTR YRKLVDF+G ANELS RVLDCLK++KL+ EK S  A  P+MF   E
Sbjct: 238  ECGQQMRFDERTRFYRKLVDFKGPANELSARVLDCLKMAKLKPEKVSVTANGPQMFHNFE 297

Query: 3459 DAAPKMSGLKYIKELILGKRTDHAFRMVVVGDPNIKVDEIGVPRHIAEAMQVSERLNSRN 3280
            DAAPKMSGLK+IKELILGKR+DH FRMVVVGDP+IK+DEIGVP HIA+AMQ+SE+LNS+N
Sbjct: 298  DAAPKMSGLKFIKELILGKRSDHTFRMVVVGDPSIKIDEIGVPCHIAQAMQISEQLNSQN 357

Query: 3279 WTTLGVRILAKGRTFIRREGGLVRVTLQNDTLQVGDTIYRPLRDRDIVLINRPPSIHPHS 3100
            W  LG+RIL +G T++RR+GGLVRVT++ND L++GDTI+RPLRD D+VLINRPPSIHPHS
Sbjct: 358  WENLGLRILTRGETYVRRDGGLVRVTMKNDKLRMGDTIHRPLRDGDMVLINRPPSIHPHS 417

Query: 3099 LIALHVKILPINSVLSLNPLICSPFRGDFDGDCYHGYVPQSVDSRVELHELVALNKQLIN 2920
            LIAL VKILP NS+LSLNPLICSPFRGDFDGDCYHGYVPQS+DS+VELHELVAL+KQLIN
Sbjct: 418  LIALSVKILPTNSILSLNPLICSPFRGDFDGDCYHGYVPQSMDSKVELHELVALDKQLIN 477

Query: 2919 GQTGQNLLSLSHDSLTAAQLVIEDGVLLDRFQMQQLQMFCTCPQQLQFPAVVKVPSPNNY 2740
             Q+GQNLLSL+HDSLTAA LVIED VLL+R QMQQLQMFC   + LQ PA+ K  S    
Sbjct: 478  IQSGQNLLSLTHDSLTAAHLVIEDEVLLNRPQMQQLQMFCPQHRSLQLPAIFKASS---- 533

Query: 2739 SNATSSDSCLWTGKQLFSLLLPPDFHYDFPSTGVHVSKGEVISSTGASSWLCDTNENLLY 2560
               TS D+  WTGKQLFSLLLPPDF Y+ PS  V VS+GEVI    ASSWL DT  NLLY
Sbjct: 534  ---TSPDTHWWTGKQLFSLLLPPDFSYNCPSRAVQVSEGEVICFQSASSWLRDTKGNLLY 590

Query: 2559 RLVKHCQEEFLDFLNAAQGVLCEWLSMRGXXXXXXXXXXXXXXXSRKNMIDEVSCALREA 2380
            +L+ HCQ EFLDFL+AAQ VL EWLS RG               S+KNMI+EV   L+EA
Sbjct: 591  KLLSHCQGEFLDFLHAAQRVLGEWLSTRGLSVSLADMYLSSDPHSQKNMIEEVRYGLQEA 650

Query: 2379 EHVSHIKLLMVDSNQDFLIGSFQESESSKDFGVDHMFYERQKSAALSQVSVSAFKQVFRD 2200
            ++VSH+KLLMVDSN DFL G+ +E+ES++ F VDH F ++QKSAALSQVSV AFKQVF++
Sbjct: 651  QYVSHVKLLMVDSNLDFLSGNHEETESTRAFSVDHSFCDQQKSAALSQVSVGAFKQVFKN 710

Query: 2199 IQNLFYQYANEDNSFLAMLKAGSKKSNLTRAVQHGMCLGLQHSLVPLSFRIPRQLSCAAW 2020
            IQNLFYQYA+EDNSFLAMLKAGSKK NLTRAVQHG+CLGLQHSLVPLSF+IP+QLSC  W
Sbjct: 711  IQNLFYQYASEDNSFLAMLKAGSKKCNLTRAVQHGLCLGLQHSLVPLSFKIPQQLSCLTW 770

Query: 2019 NSQKTLDSLNIAHDHPEYTKSYIPYAVVPSSFLTGLNPLECFVHSLTTRDSSFGGHADIS 1840
            N QK L+SL+ + D PE++ SYIPYAV+ SSFL+GLNPLE FVHSLT+RD SFGGHADIS
Sbjct: 771  NYQKELESLDSSADPPEFSSSYIPYAVIQSSFLSGLNPLESFVHSLTSRDGSFGGHADIS 830

Query: 1839 GTLTRRLMFFMRDLCIRYDGTVRNAYGNQVVQFSYNSKASSPNNNPDGSLNDSAYACAMG 1660
            GTLTRR+MFFMRDLC+ YDGTVR+A+GNQVVQF Y    ++P N+ D +L D A  C MG
Sbjct: 831  GTLTRRIMFFMRDLCMAYDGTVRSAFGNQVVQFFYGISTTAPENS-DETLTDGA--CTMG 887

Query: 1659 GQPVGXXXXXXXXXXXXXALDQPISALEASPLLNLKEILECGGNKRNNTISLFLSKKLRR 1480
            GQPVG             ALDQPISA E SPLLNLKEILECGGNK N T SLF SKKL R
Sbjct: 888  GQPVGSWAACAISEAAYSALDQPISAFEPSPLLNLKEILECGGNKVNCTASLFFSKKLAR 947

Query: 1479 WAHGFEYGALEVKSHLERVQLLDIVSTVMIMFSPKTSRHTL--PWVCHFHISKDMVKRKQ 1306
            W +GFEY ALEVK+ LERVQ  DIVSTVMIMFS +T   +   PWVCHFHI+K M  RKQ
Sbjct: 948  WTYGFEYAALEVKNRLERVQFSDIVSTVMIMFSAETCGQSRDSPWVCHFHINKVMATRKQ 1007

Query: 1305 IIVQSIIDALCMKCKSTQLKSKVYFPNLQITSKDCSEGNDATICITVSIVRSSKNSSIQL 1126
            I VQS+IDAL MK  ST++KS  + P+L+ TS +CSE N  ++CI V IV S++NS  QL
Sbjct: 1008 IKVQSVIDALKMKWNSTRVKSNAHLPDLKFTSNECSE-NITSVCINVRIVGSNRNSGPQL 1066

Query: 1125 DTLKETVIPFLLGTVIKGSSNVKKVDILWKDPPNVSTSHKGSSGELYLRVFMSETCDRTR 946
            +TL+ETVIP LL +VIKGSSNV KVDILWKD  N STS  G SGELY+RVFMSETCDR+R
Sbjct: 1067 ETLEETVIPLLLKSVIKGSSNVHKVDILWKDISNKSTSQMGVSGELYVRVFMSETCDRSR 1126

Query: 945  FWGVLMDDCLQLMDMIDWKRSHPEDIHAATLALGIDVARKLFLSKLESAISDTGKTILPE 766
            FW VLM DCLQLMD+IDWKRS+PEDIHAA  A GID A+  FLSKL SA+SDTGK +LPE
Sbjct: 1127 FWAVLMGDCLQLMDLIDWKRSYPEDIHAAASAFGIDFAKTQFLSKLASALSDTGKAVLPE 1186

Query: 765  HLLLVSDCLSSTGEYVALSANGLARQRKQTSVSSPFTQACFSSPADCFVNAAKMGIVDDL 586
            H +L++DCLS TGE+VALSA+GLARQRKQT+VSSPFTQACFSSP+DCF+NA KMG +D L
Sbjct: 1187 HSILIADCLSLTGEFVALSASGLARQRKQTAVSSPFTQACFSSPSDCFINAGKMGSMDKL 1246

Query: 585  QGSLDALSWGNTPSLGTGGQFDILYSGKGHEPDKPENIYNLLGSHINGHEQNVKLPDEGN 406
            QGS+DAL+WGN+PSLGTG QFDILYSGKGHE DKP +IYNLLGS +   EQ VK+P E +
Sbjct: 1247 QGSIDALAWGNSPSLGTGAQFDILYSGKGHEVDKPSDIYNLLGSGVGTQEQKVKVPREFS 1306

Query: 405  SMSIKYLAKEGEILRKHFNANHFWWMSKKLKDILRNYDINQQLSDLDEKMVTVALYFHPR 226
            ++SIK LAK+ + LRK+F A HF WMSK+L+ IL  Y +NQQL +LDE +   AL+FHPR
Sbjct: 1307 NISIKSLAKKSDFLRKNFKATHFLWMSKELRHILHKYKVNQQLIELDEAIAAAALFFHPR 1366

Query: 225  SIEKIGSGPQEIKIGLSSKGGNSRCFQLVRTDGSVEEFSYHKCIHHALELINPESAAEYQ 46
            S EKIG G Q IKIGLS KG  S+CFQL+RTDG++EEFSYHKCI +AL+   P SA  Y+
Sbjct: 1367 SSEKIGCGLQGIKIGLSLKGETSQCFQLIRTDGTIEEFSYHKCILNALKQTAPRSAETYE 1426

Query: 45   SLRSRWLNRRI 13
               S+WL  R+
Sbjct: 1427 ---SKWLGERL 1434


>XP_017236029.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
            [Daucus carota subsp. sativus] XP_017236030.1 PREDICTED:
            DNA-directed RNA polymerase IV subunit 1-like isoform X1
            [Daucus carota subsp. sativus] XP_017236031.1 PREDICTED:
            DNA-directed RNA polymerase IV subunit 1-like isoform X1
            [Daucus carota subsp. sativus] XP_017236032.1 PREDICTED:
            DNA-directed RNA polymerase IV subunit 1-like isoform X1
            [Daucus carota subsp. sativus] XP_017236033.1 PREDICTED:
            DNA-directed RNA polymerase IV subunit 1-like isoform X1
            [Daucus carota subsp. sativus]
          Length = 1435

 Score = 1930 bits (5001), Expect = 0.0
 Identities = 987/1452 (67%), Positives = 1156/1452 (79%), Gaps = 7/1452 (0%)
 Frame = -3

Query: 4347 MDTEYVEQQVPLGFLTGMEFNIVTEEDAEKISVKEIGAANDVTHPMLGLPNPTSSQCLTC 4168
            MD + VEQ V  GFL+ + F IVT+ED EK+SVKEI   NDV HPMLG+P P SSQCLTC
Sbjct: 1    MDYDCVEQGVTSGFLSSINFGIVTDEDVEKVSVKEIEVPNDVIHPMLGIPTPMSSQCLTC 60

Query: 4167 DAKDVKTCEGHFGLIKFPFTILHPYFISDVAKVLNRICPGCKSVRRRVKSASPTSTHHRP 3988
            DAK+VKTCEGHFG IKFP+ +LHPYFISDV K+LNRIC  CKS R R KSAS  ST  +P
Sbjct: 61   DAKNVKTCEGHFGFIKFPYPVLHPYFISDVVKILNRICVKCKSERIRTKSASSPSTKRKP 120

Query: 3987 VP----CKYCDVHLKNKYPRMNFKVSTKEIFGRTAIFAQINERLWIKSLSLASDYWDFIP 3820
                  CKYCD   K++YPR  FKVS KE+F  T I A+INER   ++  +ASDYWDF+ 
Sbjct: 121  KRKRGCCKYCDGRSKDEYPRTIFKVSGKEMFESTVILARINERS--RTPRVASDYWDFLQ 178

Query: 3819 NDPQQEENSLQPNKRVLSHLQVYHLLKDVDPRLLKDFVQDNKNSMFLSSFPVTPNSHRVN 3640
            NDPQ E N+L+P++R+L++ QV  LLK +D R +KDFV+D KN + +++FPVTPNSHRVN
Sbjct: 179  NDPQ-EGNTLKPHERILTYTQVQELLKGIDLRFMKDFVKDEKNLLSMNNFPVTPNSHRVN 237

Query: 3639 EFGQHMRFDERTRAYRKLVDFRGSANELSTRVLDCLKISKLRSEKSSSKAYAPKMFIQNE 3460
            E GQ MRFDERTR YRKLVDF+G ANELS RVLDCLK++KL+ EK S  A  P+MF   E
Sbjct: 238  ECGQQMRFDERTRFYRKLVDFKGPANELSARVLDCLKMAKLKPEKVSVTANGPQMFHNFE 297

Query: 3459 DAAPKMSGLKYIKELILGKRTDHAFRMVVVGDPNIKVDEIGVPRHIAEAMQVSERLNSRN 3280
            DAAPKMSGLK+IKELILGKR+DH FRMVVVGDP+IK+DEIGVP HIA+AMQ+SE+LNS+N
Sbjct: 298  DAAPKMSGLKFIKELILGKRSDHTFRMVVVGDPSIKIDEIGVPCHIAQAMQISEQLNSQN 357

Query: 3279 WTTLGVRILAKGRTFIRREGGLVRVTLQNDTLQVGDTIYRPLRDRDIVLINRPPSIHPHS 3100
            W  LG+RIL +G T++RR+GGLVRVT++ND L++GDTI+RPLRD D+VLINRPPSIHPHS
Sbjct: 358  WENLGLRILTRGETYVRRDGGLVRVTMKNDKLRMGDTIHRPLRDGDMVLINRPPSIHPHS 417

Query: 3099 LIALHVKILPINSVLSLNPLICSPFRGDFDGDCYHGYVPQSVDSRVELHELVALNKQLIN 2920
            LIAL VKILP NS+LSLNPLICSPFRGDFDGDCYHGYVPQS+DS+VELHELVAL+KQLIN
Sbjct: 418  LIALSVKILPTNSILSLNPLICSPFRGDFDGDCYHGYVPQSMDSKVELHELVALDKQLIN 477

Query: 2919 GQTGQNLLSLSHDSLTAAQLVIEDGVLLDRFQMQQLQMFCTCPQQLQFPAVVKVPSPNNY 2740
             Q+GQNLLSL+HDSLTAA LVIED VLL+R QMQQLQMFC   + LQ PA+ K  S    
Sbjct: 478  IQSGQNLLSLTHDSLTAAHLVIEDEVLLNRPQMQQLQMFCPQHRSLQLPAIFKASS---- 533

Query: 2739 SNATSSDSCLWTGKQLFSLLLPPDFHYDFPSTGVHVSKGEVISSTGASSWLCDTNENLLY 2560
               TS D+  WTGKQLFSLLLPPDF Y+ PS  V VS+GEVI    ASSWL DT  NLLY
Sbjct: 534  ---TSPDTHWWTGKQLFSLLLPPDFSYNCPSRAVQVSEGEVICFQSASSWLRDTKGNLLY 590

Query: 2559 RLVKHCQEEFLDFLNAAQGVLCEWLSMRGXXXXXXXXXXXXXXXSRKNMIDEVSCALREA 2380
            +L+ HCQ EFLDFL+AAQ VL EWLS RG               S+KNMI+EV   L+EA
Sbjct: 591  KLLSHCQGEFLDFLHAAQRVLGEWLSTRGLSVSLADMYLSSDPHSQKNMIEEVRYGLQEA 650

Query: 2379 EHVSHIKLLMVDSNQDFLIGSFQESESSKDFGVDHMFYERQKSAALSQVSVSAFKQVFRD 2200
            ++VSH+KLLMVDSN DFL G+ +E+ES++ F VDH F ++QKSAALSQVSV AFKQVF++
Sbjct: 651  QYVSHVKLLMVDSNLDFLSGNHEETESTRAFSVDHSFCDQQKSAALSQVSVGAFKQVFKN 710

Query: 2199 IQNLFYQYANEDNSFLAMLKAGSKKSNLTRAVQHGMCLGLQHSLVPLSFRIPRQLSCAAW 2020
            IQNLFYQYA+EDNSFLAMLKAGSKK NLTRAVQHG+CLGLQHSLVPLSF+IP+QLSC  W
Sbjct: 711  IQNLFYQYASEDNSFLAMLKAGSKKCNLTRAVQHGLCLGLQHSLVPLSFKIPQQLSCLTW 770

Query: 2019 NSQKTLDSLNIAHDHPEYTKSYIPYAVVPSSFLTGLNPLECFVHSLTTRDSSFGGHADIS 1840
            N QK L+SL+ + D PE++ SYIPYAV+ SSFL+GLNPLE FVHSLT+RD SFGGHADIS
Sbjct: 771  NYQKELESLDSSADPPEFSSSYIPYAVIQSSFLSGLNPLESFVHSLTSRDGSFGGHADIS 830

Query: 1839 GTLTRRLMFFMRDLCIRYDGTVRNAYGNQVVQFSYNSKASSPNNNPDGSLNDSAYACAMG 1660
            GTLTRR+MFFMRDLC+ YDGTVR+A+GNQVVQF Y    ++P N+ D +L D A  C MG
Sbjct: 831  GTLTRRIMFFMRDLCMAYDGTVRSAFGNQVVQFFYGISTTAPENS-DETLTDGA--CTMG 887

Query: 1659 GQPVGXXXXXXXXXXXXXALDQPISALEASPLLNLKEILECGGNKRNNTISLFLSKKLRR 1480
            GQPVG             ALDQPISA E SPLLNLKEILECGGNK N T SLF SKKL R
Sbjct: 888  GQPVGSWAACAISEAAYSALDQPISAFEPSPLLNLKEILECGGNKVNCTASLFFSKKLAR 947

Query: 1479 WAHGFEYGALEVKSHLERVQLLDIVSTVMIMFSPKTSRHTL--PWVCHFHISKDMVKRKQ 1306
            W +GFEY ALEVK+ LERVQ  DIVSTVMIMFS +T   +   PWVCHFHI+K M  RKQ
Sbjct: 948  WTYGFEYAALEVKNRLERVQFSDIVSTVMIMFSAETCGQSRDSPWVCHFHINKVMATRKQ 1007

Query: 1305 IIVQSIIDALCMKCKSTQLKSKVYFPNLQITSK-DCSEGNDATICITVSIVRSSKNSSIQ 1129
            I VQS+IDAL MK  ST++KS  + P+L+ TS  +CSE N  ++CI V IV S++NS  Q
Sbjct: 1008 IKVQSVIDALKMKWNSTRVKSNAHLPDLKFTSNSECSE-NITSVCINVRIVGSNRNSGPQ 1066

Query: 1128 LDTLKETVIPFLLGTVIKGSSNVKKVDILWKDPPNVSTSHKGSSGELYLRVFMSETCDRT 949
            L+TL+ETVIP LL +VIKGSSNV KVDILWKD  N STS  G SGELY+RVFMSETCDR+
Sbjct: 1067 LETLEETVIPLLLKSVIKGSSNVHKVDILWKDISNKSTSQMGVSGELYVRVFMSETCDRS 1126

Query: 948  RFWGVLMDDCLQLMDMIDWKRSHPEDIHAATLALGIDVARKLFLSKLESAISDTGKTILP 769
            RFW VLM DCLQLMD+IDWKRS+PEDIHAA  A GID A+  FLSKL SA+SDTGK +LP
Sbjct: 1127 RFWAVLMGDCLQLMDLIDWKRSYPEDIHAAASAFGIDFAKTQFLSKLASALSDTGKAVLP 1186

Query: 768  EHLLLVSDCLSSTGEYVALSANGLARQRKQTSVSSPFTQACFSSPADCFVNAAKMGIVDD 589
            EH +L++DCLS TGE+VALSA+GLARQRKQT+VSSPFTQACFSSP+DCF+NA KMG +D 
Sbjct: 1187 EHSILIADCLSLTGEFVALSASGLARQRKQTAVSSPFTQACFSSPSDCFINAGKMGSMDK 1246

Query: 588  LQGSLDALSWGNTPSLGTGGQFDILYSGKGHEPDKPENIYNLLGSHINGHEQNVKLPDEG 409
            LQGS+DAL+WGN+PSLGTG QFDILYSGKGHE DKP +IYNLLGS +   EQ VK+P E 
Sbjct: 1247 LQGSIDALAWGNSPSLGTGAQFDILYSGKGHEVDKPSDIYNLLGSGVGTQEQKVKVPREF 1306

Query: 408  NSMSIKYLAKEGEILRKHFNANHFWWMSKKLKDILRNYDINQQLSDLDEKMVTVALYFHP 229
            +++SIK LAK+ + LRK+F A HF WMSK+L+ IL  Y +NQQL +LDE +   AL+FHP
Sbjct: 1307 SNISIKSLAKKSDFLRKNFKATHFLWMSKELRHILHKYKVNQQLIELDEAIAAAALFFHP 1366

Query: 228  RSIEKIGSGPQEIKIGLSSKGGNSRCFQLVRTDGSVEEFSYHKCIHHALELINPESAAEY 49
            RS EKIG G Q IKIGLS KG  S+CFQL+RTDG++EEFSYHKCI +AL+   P SA  Y
Sbjct: 1367 RSSEKIGCGLQGIKIGLSLKGETSQCFQLIRTDGTIEEFSYHKCILNALKQTAPRSAETY 1426

Query: 48   QSLRSRWLNRRI 13
            +   S+WL  R+
Sbjct: 1427 E---SKWLGERL 1435


>XP_010661369.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2 [Vitis
            vinifera]
          Length = 1458

 Score = 1642 bits (4253), Expect = 0.0
 Identities = 875/1490 (58%), Positives = 1066/1490 (71%), Gaps = 49/1490 (3%)
 Frame = -3

Query: 4347 MDTEYVE-QQVPLGFLTGMEFNIVTEEDAEKISVKEIGAANDVTHPMLGLPNPTSSQCLT 4171
            MD +++E QQVP G L G++F++ TEED EKISV +I A N++T P LG+PNP S QC T
Sbjct: 1    MDNDFLEEQQVPSGLLIGIKFDVSTEEDMEKISVMKIDAVNEITDPKLGVPNP-SCQCST 59

Query: 4170 CDAKDVKTCEGHFGLIKFPFTILHPYFISDVAKVLNRICPGCKSVRRR--VKSASPTSTH 3997
            C AKD K CEGHFG+IKFPFTILHPYF+++V ++LN+ICPGCKS R+   VK A   S  
Sbjct: 60   CGAKDTKKCEGHFGVIKFPFTILHPYFLTEVVQILNKICPGCKSTRQGQWVKGADSGSRR 119

Query: 3996 HRPVPCKYCDVHLKNKYPRMNFKVSTKEIFGRTAIFAQINERLWIKSLS------LASDY 3835
             R   CKYC  +  + YP M FKVS+K++F +TAI  ++NE+L  K         L  DY
Sbjct: 120  LRSKGCKYCAANSNDWYPTMKFKVSSKDLFRKTAIIVEMNEKLPKKLQKKSFRPVLPLDY 179

Query: 3834 WDFIPNDPQQEENSLQPNKRVLSHLQVYHLLKDVDPRLLKDFVQDNKNSMFLSSFPVTPN 3655
            WDFIP DPQQEEN L PN+RVLSH QV++LLKD+DP  +K+FV    +S FL+  PVTPN
Sbjct: 180  WDFIPKDPQQEENCLNPNRRVLSHAQVHYLLKDIDPGFIKEFVS-RMDSFFLNCLPVTPN 238

Query: 3654 SHRVNEF------GQHMRFDERTRAYRKLVDFRGSANELSTRVLDCLKISKLRSEKSSSK 3493
            +HRV E       GQ + FD+ +RAY+KLVDFRG+ANELS RVLDCLK SKLRSEKS+SK
Sbjct: 239  NHRVTEITHALSNGQTLIFDQHSRAYKKLVDFRGTANELSCRVLDCLKTSKLRSEKSTSK 298

Query: 3492 AYAPKMFIQNEDAAPKMSGLKYIKELILGKRTDHAFRMVVVGDPNIKVDEIGVPRHIAEA 3313
                       D+A KMSGLK+IKE++LGKRT+H+FRM+VVGDP +++ EIG+P HIAE 
Sbjct: 299  -----------DSASKMSGLKWIKEVLLGKRTNHSFRMIVVGDPKLRLSEIGIPCHIAEE 347

Query: 3312 MQVSERLNSRNWTTL----GVRILAKGRTFIRREGGLVRVTLQNDTLQVGDTIYRPLRDR 3145
            + +SE LNS NW  +     +R+L KG+T++RR+G L  V   ND  Q GD IYRPL D 
Sbjct: 348  LLISEHLNSWNWEKVTNGCNLRLLEKGQTYVRRKGTLAPVRRMND-FQAGDIIYRPLTDG 406

Query: 3144 DIVLINRPPSIHPHSLIALHVKILPINSVLSLNPLICSPFRGDFDGDCYHGYVPQSVDSR 2965
            DIVLINRPPSIH HS+IAL VK+LP+NSV+S+NPL CSPFRGDFDGDC HGY+PQSVDSR
Sbjct: 407  DIVLINRPPSIHQHSVIALSVKVLPLNSVVSINPLCCSPFRGDFDGDCLHGYIPQSVDSR 466

Query: 2964 VELHELVALNKQLINGQTGQNLLSLSHDSLTAAQLVIEDGVLLDRFQMQQLQMFCTCPQQ 2785
            VEL ELVALN+QLIN Q+G+NLLSLS DSL+AA LV+EDGVLL+ FQMQQL+MFC  P Q
Sbjct: 467  VELSELVALNRQLINRQSGRNLLSLSQDSLSAAHLVMEDGVLLNLFQMQQLEMFC--PYQ 524

Query: 2784 LQFPAVVKVPSPNNYSNATSSDSCLWTGKQLFSLLLPPDFHYDFPSTGVHVSKGEVISST 2605
            LQ PA++K P           D+ +WTGKQLFS+LLPP F+Y FP  GV +S GE+ISS+
Sbjct: 525  LQSPAIIKAPL---------LDTQVWTGKQLFSMLLPPGFNYVFPLNGVRISDGELISSS 575

Query: 2604 GASSWLCDTNENLLYRLVKHCQEEFLDFLNAAQGVLCEWLSMRGXXXXXXXXXXXXXXXS 2425
              S+WL D + NL   LVK CQ + LDFL AAQ VLCEWLSMRG               S
Sbjct: 576  DGSAWLRDIDGNLFSSLVKDCQGKALDFLYAAQEVLCEWLSMRGLSVSLSDIYLSSDSIS 635

Query: 2424 RKNMIDEVSCALREAEHVSHIKLLMVDSNQDFLIGSFQESESSKDFGVDHMFYERQKSAA 2245
            RKNMIDEV C L  AE   H K L+VDS+Q+FLIGS + +++     V  ++YERQ SAA
Sbjct: 636  RKNMIDEVFCGLLVAEQTCHFKQLLVDSSQNFLIGSGENNQNGVVPDVQSLWYERQGSAA 695

Query: 2244 LSQVSVSAFKQVFRDIQNLFYQYANEDNSFLAMLKAGSKKSNLTRAVQHGMCLGLQHSLV 2065
            L Q SV AFKQ FRDIQNL YQYAN+DNS LAMLKAGSK  NL + VQ G+CLGLQHSLV
Sbjct: 696  LCQSSVCAFKQKFRDIQNLVYQYANKDNSLLAMLKAGSK-GNLLKLVQQGLCLGLQHSLV 754

Query: 2064 PLSFRIPRQLSCAAWNSQKTLDSLNIAHDHPEYTKSYIPYAVVPSSFLTGLNPLECFVHS 1885
            PLSF+IP QLSCAAWN QK      I +D  EY +SYIPYAVV +SFL GLNPLECFVHS
Sbjct: 755  PLSFKIPHQLSCAAWNKQKVPGL--IQNDTSEYAESYIPYAVVENSFLMGLNPLECFVHS 812

Query: 1884 LTTRDSSFGGHADISGTLTRRLMFFMRDLCIRYDGTVRNAYGNQVVQFSYNSKASSPNNN 1705
            +T+RDSSF  +AD+ GTLTRRLMFFMRDL I YDGTVRNAYGNQ+VQFSYN + +S    
Sbjct: 813  VTSRDSSFSDNADLPGTLTRRLMFFMRDLYIAYDGTVRNAYGNQLVQFSYNIEHTS---T 869

Query: 1704 PDGSLNDSAYACAMGGQPVGXXXXXXXXXXXXXALDQPISALEASPLLNLKEILECGGNK 1525
            P   +N+   A  MGGQPVG             ALDQPIS LE SPLLNLK +LECG  K
Sbjct: 870  PSDGINEDTCAYDMGGQPVGSISACAISEAAYSALDQPISLLEPSPLLNLKRVLECGLRK 929

Query: 1524 R--NNTISLFLSKKLRRWAHGFEYGALEVKSHLERVQLLDIVSTVMIMFSPK--TSRHTL 1357
               + T+SLFLSKKL +  HGFEYGALEVK+HLE++   DIVSTVMI+FSP+  +  H  
Sbjct: 930  STADRTVSLFLSKKLEKRKHGFEYGALEVKNHLEKLLFSDIVSTVMIVFSPQNGSKTHFS 989

Query: 1356 PWVCHFHISKDMVKRKQIIVQSIIDALCMKCKSTQLKSKVYFPNLQITSKDC-----SEG 1192
            PWVCHFH+ +++ K++ +   SIIDAL MKC S + +SK+  P+LQITSKDC      E 
Sbjct: 990  PWVCHFHVCEEIAKKRSLKPHSIIDALYMKCNSARAESKINLPDLQITSKDCFVDMEKED 1049

Query: 1191 NDATICITVSIVRSSKNSSIQLDTLKETVIPFLLGTVIKGSSNVKKVDILWKDPPNVSTS 1012
            +D   CITVSIV +SK S IQLDT+++ VIPFLLG V+KG  +VKKVDILW D P+ S  
Sbjct: 1050 SDC-FCITVSIV-NSKKSCIQLDTVRDLVIPFLLGAVVKGLLDVKKVDILWNDNPD-SDV 1106

Query: 1011 HKGSSGELYLRVFMSETCDRTRFWGVLMDDCLQLMDMIDWKRSHPEDIHAATLALGIDVA 832
             K SSG LYLRV++S  C +  FWGVLMD CLQ+MDMIDW+RSHP++IH   +  GID  
Sbjct: 1107 LKSSSGRLYLRVYVSGDCGKKNFWGVLMDACLQIMDMIDWERSHPDNIHDIFVVYGIDAG 1166

Query: 831  RKLFLSKLESAISDTGKTILPEHLLLVSDCLSSTGEYVALSANGLARQRKQTSVSSPFTQ 652
             K FL+ L+SAISD GKT+LPEHLLLV+ CLS+TGE+V L+A G+ARQ++ TS+SSPF Q
Sbjct: 1167 WKYFLNSLKSAISDIGKTVLPEHLLLVASCLSATGEFVGLNAKGMARQKELTSISSPFMQ 1226

Query: 651  ACFSSPADCFVNAAKMGIVDDLQGSLDALSWGNTPSLGTGGQFDILYSGKGHEPDKPENI 472
             CFSSP  CF+ A K  + D+L GSLDAL+WG  PS+G+GG FDILYS KGHE  +PE+I
Sbjct: 1227 GCFSSPGSCFIKAGKRAVADNLHGSLDALAWGKIPSVGSGGHFDILYSAKGHELARPEDI 1286

Query: 471  YNLLGSHINGHEQNVKLP--------------------DEGNSMSIKYLAK-EGEILRKH 355
            Y LLGS  + HEQN+K+                      +  S   K L K    +LR  
Sbjct: 1287 YKLLGSQTSCHEQNLKVKVPITCYQTTTKCGAQLVYANGDSASKGCKSLEKISKSVLRSF 1346

Query: 354  FNANHFWWMSKKLKDILRNYDINQQLSDLDEKMVTVALYFHPRSIEKIGSGPQEIKIGLS 175
             + N    +S++LK IL+ Y IN QLS++D+  + +ALYFHPR  EKIG G Q IK+   
Sbjct: 1347 LSLNDIQKLSRRLKFILQKYPINHQLSEIDKTTLMMALYFHPRRDEKIGPGAQNIKVRYH 1406

Query: 174  SKGGNSRCFQLVRTDGSVEEFSYHKCIHHALELINPESAAEYQSLRSRWL 25
            SK  N+RCF LVRTDG+ E+FSYHKC+H ALE+I+P  A  YQ   SRWL
Sbjct: 1407 SKYHNTRCFSLVRTDGTEEDFSYHKCVHGALEIIDPRRARSYQ---SRWL 1453


>XP_010661365.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1 [Vitis
            vinifera]
          Length = 1460

 Score = 1636 bits (4237), Expect = 0.0
 Identities = 874/1492 (58%), Positives = 1066/1492 (71%), Gaps = 51/1492 (3%)
 Frame = -3

Query: 4347 MDTEYVE-QQVPLGFLTGMEFNIVTEEDAEKISVKEIGAANDVTHPMLGLPNPTSSQCLT 4171
            MD +++E QQVP G L G++F++ TEED EKISV +I A N++T P LG+PNP S QC T
Sbjct: 1    MDNDFLEEQQVPSGLLIGIKFDVSTEEDMEKISVMKIDAVNEITDPKLGVPNP-SCQCST 59

Query: 4170 CDAKDVKTCEGHFGLIKFPFTILHPYFISDVAKVLNRICPGCKSVRRR--VKSASPTSTH 3997
            C AKD K CEGHFG+IKFPFTILHPYF+++V ++LN+ICPGCKS R+   VK A   S  
Sbjct: 60   CGAKDTKKCEGHFGVIKFPFTILHPYFLTEVVQILNKICPGCKSTRQGQWVKGADSGSRR 119

Query: 3996 HRPVPCKYCDVHLKNKYPRMNFKVSTKEIFGRTAIFAQINERLWIKSLS------LASDY 3835
             R   CKYC  +  + YP M FKVS+K++F +TAI  ++NE+L  K         L  DY
Sbjct: 120  LRSKGCKYCAANSNDWYPTMKFKVSSKDLFRKTAIIVEMNEKLPKKLQKKSFRPVLPLDY 179

Query: 3834 WDFIPNDPQQEENSLQPNKRVLSHLQVYHLLKDVDPRLLKDFVQDNKNSMFLSSFPVTPN 3655
            WDFIP DPQQEEN L PN+RVLSH QV++LLKD+DP  +K+FV    +S FL+  PVTPN
Sbjct: 180  WDFIPKDPQQEENCLNPNRRVLSHAQVHYLLKDIDPGFIKEFVS-RMDSFFLNCLPVTPN 238

Query: 3654 SHRVNEF------GQHMRFDERTRAYRKLVDFRGSANELSTRVLDCLKISKLRSEKSSSK 3493
            +HRV E       GQ + FD+ +RAY+KLVDFRG+ANELS RVLDCLK SKLRSEKS+SK
Sbjct: 239  NHRVTEITHALSNGQTLIFDQHSRAYKKLVDFRGTANELSCRVLDCLKTSKLRSEKSTSK 298

Query: 3492 AYAPKMFIQNEDAAPKMSGLKYIKELILGKRTDHAFRMVVVGDPNIKVDEIGVPRHIAEA 3313
                       D+A KMSGLK+IKE++LGKRT+H+FRM+VVGDP +++ EIG+P HIAE 
Sbjct: 299  -----------DSASKMSGLKWIKEVLLGKRTNHSFRMIVVGDPKLRLSEIGIPCHIAEE 347

Query: 3312 MQVSERLNSRNWTTL----GVRILAKGRTFIRREGGLVRVTLQNDTLQVGDTIYRPLRDR 3145
            + +SE LNS NW  +     +R+L KG+T++RR+G L  V   ND  Q GD IYRPL D 
Sbjct: 348  LLISEHLNSWNWEKVTNGCNLRLLEKGQTYVRRKGTLAPVRRMND-FQAGDIIYRPLTDG 406

Query: 3144 DIVLINRPPSIHPHSLIALHVKILPINSVLSLNPLICSPFRGDFDGDCYHGYVPQSVDSR 2965
            DIVLINRPPSIH HS+IAL VK+LP+NSV+S+NPL CSPFRGDFDGDC HGY+PQSVDSR
Sbjct: 407  DIVLINRPPSIHQHSVIALSVKVLPLNSVVSINPLCCSPFRGDFDGDCLHGYIPQSVDSR 466

Query: 2964 VELHELVALNKQLINGQTGQNLLSLSHDSLTAAQLVIEDGVLLDRFQMQQLQMFCTCPQQ 2785
            VEL ELVALN+QLIN Q+G+NLLSLS DSL+AA LV+EDGVLL+ FQMQQL+MFC  P Q
Sbjct: 467  VELSELVALNRQLINRQSGRNLLSLSQDSLSAAHLVMEDGVLLNLFQMQQLEMFC--PYQ 524

Query: 2784 LQFPAVVKVPSPNNYSNATSSDSCLWTGKQLFSLLLPPDFHYDFPSTGVHVSKGEVISST 2605
            LQ PA++K P           D+ +WTGKQLFS+LLPP F+Y FP  GV +S GE+ISS+
Sbjct: 525  LQSPAIIKAPL---------LDTQVWTGKQLFSMLLPPGFNYVFPLNGVRISDGELISSS 575

Query: 2604 GASSWLCDTNENLLYRLVKHCQEEFLDFLNAAQGVLCEWLSMRGXXXXXXXXXXXXXXXS 2425
              S+WL D + NL   LVK CQ + LDFL AAQ VLCEWLSMRG               S
Sbjct: 576  DGSAWLRDIDGNLFSSLVKDCQGKALDFLYAAQEVLCEWLSMRGLSVSLSDIYLSSDSIS 635

Query: 2424 RKNMIDEVSCALREAEHVSHIKLLMVDSNQDFLIGSFQESESSKDFGVDHMFYERQKSAA 2245
            RKNMIDEV C L  AE   H K L+VDS+Q+FLIGS + +++     V  ++YERQ SAA
Sbjct: 636  RKNMIDEVFCGLLVAEQTCHFKQLLVDSSQNFLIGSGENNQNGVVPDVQSLWYERQGSAA 695

Query: 2244 LSQVSVSAFKQVFRDIQNLFYQYANEDNSFLAMLKAGSKKSNLTRAVQHGMCLGLQHSLV 2065
            L Q SV AFKQ FRDIQNL YQYAN+DNS LAMLKAGSK  NL + VQ G+CLGLQHSLV
Sbjct: 696  LCQSSVCAFKQKFRDIQNLVYQYANKDNSLLAMLKAGSK-GNLLKLVQQGLCLGLQHSLV 754

Query: 2064 PLSFRIPRQLSCAAWNSQKTLDSLNIAHDHPEYTKSYIPYAVVPSSFLTGLNPLECFVHS 1885
            PLSF+IP QLSCAAWN QK      I +D  EY +SYIPYAVV +SFL GLNPLECFVHS
Sbjct: 755  PLSFKIPHQLSCAAWNKQKVPGL--IQNDTSEYAESYIPYAVVENSFLMGLNPLECFVHS 812

Query: 1884 LTTRDSSFGGHADISGTLTRRLMFFMRDLCIRYDGTVRNAYGNQVVQFSYNSKASSPNNN 1705
            +T+RDSSF  +AD+ GTLTRRLMFFMRDL I YDGTVRNAYGNQ+VQFSYN + +S    
Sbjct: 813  VTSRDSSFSDNADLPGTLTRRLMFFMRDLYIAYDGTVRNAYGNQLVQFSYNIEHTS---T 869

Query: 1704 PDGSLNDSAYACAMGGQPVGXXXXXXXXXXXXXALDQPISALEASPLLNLKEILECGGNK 1525
            P   +N+   A  MGGQPVG             ALDQPIS LE SPLLNLK +LECG  K
Sbjct: 870  PSDGINEDTCAYDMGGQPVGSISACAISEAAYSALDQPISLLEPSPLLNLKRVLECGLRK 929

Query: 1524 R--NNTISLFLSKKLRRWAHGFEYGALEVKSHLERVQLLDIVSTVMIMFSPK--TSRHTL 1357
               + T+SLFLSKKL +  HGFEYGALEVK+HLE++   DIVSTVMI+FSP+  +  H  
Sbjct: 930  STADRTVSLFLSKKLEKRKHGFEYGALEVKNHLEKLLFSDIVSTVMIVFSPQNGSKTHFS 989

Query: 1356 PWVCHFHISKDMVKRKQIIVQSIIDALCMKCKSTQLKSKVYFPNLQITS--KDC-----S 1198
            PWVCHFH+ +++ K++ +   SIIDAL MKC S + +SK+  P+LQITS  +DC      
Sbjct: 990  PWVCHFHVCEEIAKKRSLKPHSIIDALYMKCNSARAESKINLPDLQITSNGRDCFVDMEK 1049

Query: 1197 EGNDATICITVSIVRSSKNSSIQLDTLKETVIPFLLGTVIKGSSNVKKVDILWKDPPNVS 1018
            E +D   CITVSIV +SK S IQLDT+++ VIPFLLG V+KG  +VKKVDILW D P+ S
Sbjct: 1050 EDSDC-FCITVSIV-NSKKSCIQLDTVRDLVIPFLLGAVVKGLLDVKKVDILWNDNPD-S 1106

Query: 1017 TSHKGSSGELYLRVFMSETCDRTRFWGVLMDDCLQLMDMIDWKRSHPEDIHAATLALGID 838
               K SSG LYLRV++S  C +  FWGVLMD CLQ+MDMIDW+RSHP++IH   +  GID
Sbjct: 1107 DVLKSSSGRLYLRVYVSGDCGKKNFWGVLMDACLQIMDMIDWERSHPDNIHDIFVVYGID 1166

Query: 837  VARKLFLSKLESAISDTGKTILPEHLLLVSDCLSSTGEYVALSANGLARQRKQTSVSSPF 658
               K FL+ L+SAISD GKT+LPEHLLLV+ CLS+TGE+V L+A G+ARQ++ TS+SSPF
Sbjct: 1167 AGWKYFLNSLKSAISDIGKTVLPEHLLLVASCLSATGEFVGLNAKGMARQKELTSISSPF 1226

Query: 657  TQACFSSPADCFVNAAKMGIVDDLQGSLDALSWGNTPSLGTGGQFDILYSGKGHEPDKPE 478
             Q CFSSP  CF+ A K  + D+L GSLDAL+WG  PS+G+GG FDILYS KGHE  +PE
Sbjct: 1227 MQGCFSSPGSCFIKAGKRAVADNLHGSLDALAWGKIPSVGSGGHFDILYSAKGHELARPE 1286

Query: 477  NIYNLLGSHINGHEQNVKLP--------------------DEGNSMSIKYLAK-EGEILR 361
            +IY LLGS  + HEQN+K+                      +  S   K L K    +LR
Sbjct: 1287 DIYKLLGSQTSCHEQNLKVKVPITCYQTTTKCGAQLVYANGDSASKGCKSLEKISKSVLR 1346

Query: 360  KHFNANHFWWMSKKLKDILRNYDINQQLSDLDEKMVTVALYFHPRSIEKIGSGPQEIKIG 181
               + N    +S++LK IL+ Y IN QLS++D+  + +ALYFHPR  EKIG G Q IK+ 
Sbjct: 1347 SFLSLNDIQKLSRRLKFILQKYPINHQLSEIDKTTLMMALYFHPRRDEKIGPGAQNIKVR 1406

Query: 180  LSSKGGNSRCFQLVRTDGSVEEFSYHKCIHHALELINPESAAEYQSLRSRWL 25
              SK  N+RCF LVRTDG+ E+FSYHKC+H ALE+I+P  A  YQ   SRWL
Sbjct: 1407 YHSKYHNTRCFSLVRTDGTEEDFSYHKCVHGALEIIDPRRARSYQ---SRWL 1455


>CDP09818.1 unnamed protein product [Coffea canephora]
          Length = 1511

 Score = 1613 bits (4176), Expect = 0.0
 Identities = 854/1486 (57%), Positives = 1085/1486 (73%), Gaps = 36/1486 (2%)
 Frame = -3

Query: 4371 EISSSLVSMDTEYVEQQVPLGFLTGMEFNIVTEEDAEKISVKEIGAANDVTHPMLGLPNP 4192
            E++    ++D E+ E+    G L  + FNI++E DA + SVK IGAA++VT P LG PN 
Sbjct: 34   ELNMDRATIDIEHSEKLEQKGRLMSISFNILSEADAVRKSVKLIGAASEVTDPALGFPN- 92

Query: 4191 TSSQCLTCDAKDVKTCEGHFGLIKFPFTILHPYFISDVAKVLNRICPGCKSVR-RRVKSA 4015
              + C TC AKD + CEGHFGLI FPFTIL+PYF+ +VA++LN+ICP CKSVR  +VKS+
Sbjct: 93   LINHCNTCGAKDRRECEGHFGLINFPFTILNPYFLPEVAQILNKICPACKSVRVNKVKSS 152

Query: 4014 SPTSTHHRPVPCKYCDVHLKNKYPRMNFKVSTKEIFGRTAIFAQINERLWIKSLS---LA 3844
              TS       CKYCD   ++ YP M FKV++K++F +TAI A+++ER      S   +A
Sbjct: 153  GSTSVRDHSDTCKYCDGRSRDSYPPMKFKVTSKDVFAKTAISAEVSERSSSNRSSNGSMA 212

Query: 3843 SDYWDFIPNDPQQEENSLQPNKRVLSHLQVYHLLKDVDPRLLKDFVQDNKNSMFLSSFPV 3664
            SDYWD IP+D QQ+ ++L  NKR+LSH QVY++LKDVDPR L+ F++  K+S+FL+ F +
Sbjct: 213  SDYWDIIPSDAQQDLSNLGSNKRLLSHAQVYNILKDVDPRFLESFLK-RKSSVFLNCFLL 271

Query: 3663 TPNSHRVNEFGQHMRFDERTRAYRKLVDFRGSANELSTRVLDCLKISKLRSEKSSS--KA 3490
            TPN HRV E GQH+ FD +T+ Y+KL+DFRG+ANELS RVLD +K+SK+RSEKSS+   A
Sbjct: 272  TPNCHRVTELGQHITFDTKTKLYKKLIDFRGTANELSARVLDLIKVSKVRSEKSSAINSA 331

Query: 3489 YAPKMFIQNEDAAPKMSGLKYIKELILGKRTDHAFRMVVVGDPNIKVDEIGVPRHIAEAM 3310
            ++   F   +D+A   SGLKYIKEL+LGKRTDHAFRMVVVGDPNI + EIG+PRHIAE +
Sbjct: 332  FSVLGF---KDSAVATSGLKYIKELLLGKRTDHAFRMVVVGDPNINLGEIGMPRHIAEKL 388

Query: 3309 QVSERLNSRNWTTL----GVRILAKGRTFIRREGGLVRVTLQNDTLQVGDTIYRPLRDRD 3142
             VSE +N  N+  L     + ++  G   +RR G L ++++  D L  GD +YRP+ D D
Sbjct: 389  LVSEHVNKWNFGKLKDYVALILVGGGEICVRRGGRLEKLSII-DKLCCGDVLYRPMLDGD 447

Query: 3141 IVLINRPPSIHPHSLIALHVKILPINSVLSLNPLICSPFRGDFDGDCYHGYVPQSVDSRV 2962
            IVLINRPPSIH HS+++L V+ILPINSVLS+NPLICSP RGDFDGDC HGYV QSVDSRV
Sbjct: 448  IVLINRPPSIHQHSMLSLSVRILPINSVLSINPLICSPLRGDFDGDCLHGYVSQSVDSRV 507

Query: 2961 ELHELVALNKQLINGQTGQNLLSLSHDSLTAAQLVIEDGVLLDRFQMQQLQMFCTCPQQL 2782
            EL+ELVALNKQL+NGQ+G+NLLSLSHDSLTAA L++EDGV LD+FQMQQLQMFC+CP  +
Sbjct: 508  ELNELVALNKQLLNGQSGRNLLSLSHDSLTAAHLILEDGVTLDKFQMQQLQMFCSCPMPI 567

Query: 2781 QFPAVVKVPSPNNYSNATSSDSCLWTGKQLFSLLLPPDFHYDFPSTGVHVSKGEVISSTG 2602
              PA+ K P           + C WTGKQLFSLL+PP F Y   S GV +SKGE+++S+ 
Sbjct: 568  --PAITKAPG----------NKCFWTGKQLFSLLIPPCFDYVSQSNGVQISKGEIVTSSS 615

Query: 2601 ASSWLCDTNENLLYRLVKHCQEEFLDFLNAAQGVLCEWLSMRGXXXXXXXXXXXXXXXSR 2422
             SSWL D + NL + LV+ C+ E L FL AAQ VLCEWL+MRG               SR
Sbjct: 616  GSSWLRDNDGNLFHSLVRCCKNEVLGFLCAAQEVLCEWLAMRGLSVSLSDLYLTSDAYSR 675

Query: 2421 KNMIDEVSCALREAEHVSHIKLLMVDSNQDFLIGSFQESESSKDFGVDHMF-YERQKSAA 2245
            +NMI+EVSC L+EAE +S I+LLM+ SNQDFL+ S + ++ S DFG  H+   ++Q S+ 
Sbjct: 676  QNMIEEVSCGLQEAELLSSIRLLMMGSNQDFLVESTEANKRSVDFGEQHLSSIQQQNSSV 735

Query: 2244 LSQVSVSAFKQVFRDIQNLFYQYANEDNSFLAMLKAGSKKSNLTRAVQHGMCLGLQHSLV 2065
            LS+ SVSAFKQVF D+Q+L Y Y ++DNSFL+ML AGSK  NL + VQH MCLGLQHS+V
Sbjct: 736  LSEASVSAFKQVFLDVQHLVYHYVSKDNSFLSMLMAGSK-GNLLKLVQHSMCLGLQHSVV 794

Query: 2064 PLSFRIPRQLSCAAWNSQKTLDSLNIAHDHPEYTKSYIPYAVVPSSFLTGLNPLECFVHS 1885
            PLSF IP QLSCA WN  K   S++ +H   +++ SYIP+AV+ +SFLTGLNP+ECFVHS
Sbjct: 795  PLSFSIPHQLSCATWNYHKI--SVHESHGTLDHSGSYIPFAVIENSFLTGLNPMECFVHS 852

Query: 1884 LTTRDSSFGGHADISGTLTRRLMFFMRDLCIRYDGTVRNAYGNQVVQFSYNSKAS-SPNN 1708
            LTTRDSSF GHAD+SGTLTR+LMFFMRDL I YDGTVRN+YGNQ++QFSYNS+ + +P N
Sbjct: 853  LTTRDSSFSGHADVSGTLTRKLMFFMRDLSIGYDGTVRNSYGNQLIQFSYNSRDTLTPCN 912

Query: 1707 NPDGSLNDSAYACAMGGQPVGXXXXXXXXXXXXXALDQPISALEASPLLNLKEILECGGN 1528
              D S +++  A  +GG PVG             ALD PISALE+SPLLNLK+IL+CG  
Sbjct: 913  CNDESPSETISAYDVGGHPVGALAACAISEAAYSALDLPISALESSPLLNLKKILDCGVK 972

Query: 1527 KRNN--TISLFLSKKLRRWAHGFEYGALEVKSHLERVQLLDIVSTVMIMFSP-KTSRHTL 1357
            K +   T S+FL KKL R  +G EYGALEVK HLER+ L D+VS+ MI +S  K SR  +
Sbjct: 973  KSSGDKTASIFLCKKLGRQTYGLEYGALEVKDHLERLMLEDVVSSSMISYSKEKCSRSQI 1032

Query: 1356 -PWVCHFHISKDMVKRKQIIVQSIIDALCMKCKSTQLKSKVYFPNLQITSKDCS-----E 1195
             PW+CHFHISK+++KRK++ VQSIIDAL M  +S ++K K+  P+LQIT K CS      
Sbjct: 1033 SPWICHFHISKEIIKRKRLRVQSIIDALNMAWRSAKVKLKINLPDLQITGKACSLALKQN 1092

Query: 1194 GNDATICITVSIVRSSKNSSIQLDTLKETVIPFLLGTVIKGSSNVKKVDILWKDPPNVST 1015
              D  IC+TVSI+  SK SS++LD L+  V+PFLLGTVIKG    KKVDI+WKD  N S 
Sbjct: 1093 EKDTKICLTVSILEKSKKSSLRLDILRNMVMPFLLGTVIKGFPEFKKVDIMWKDCRNSSK 1152

Query: 1014 SHKGSSGELYLRVFMSETCDRTRFWGVLMDDCLQLMDMIDWKRSHPEDIHAATLALGIDV 835
            S KGS G +YLRVFMSE CDRT+FW VL+D+CL++ D+IDW+RSHP+DIH    A GID 
Sbjct: 1153 SSKGSLGGVYLRVFMSEKCDRTKFWSVLVDNCLRIRDLIDWERSHPDDIHDMAPAYGIDA 1212

Query: 834  ARKLFLSKLESAISDTGKTILPEHLLLVSDCLSSTGEYVALSANGLARQRKQTSVSSPFT 655
            A   FLS L SAISDTGKTILPEHL+L +DCLS+TGE+VAL+A GLA+QRK+T+VSSPF 
Sbjct: 1213 AVNHFLSSLNSAISDTGKTILPEHLVLTADCLSATGEFVALNAKGLAQQRKETAVSSPFL 1272

Query: 654  QACFSSPADCFVNAAKMGIVDDLQGSLDALSWGNTPSLGTGGQFDILYSGKGHEPDKPEN 475
            QACFSSP DCFV AAK GIVD+LQG++DAL+WG  PS+GTG +FDI+YSGKGHEP K  +
Sbjct: 1273 QACFSSPGDCFVRAAKTGIVDNLQGTVDALAWGMVPSIGTGARFDIIYSGKGHEPAKSID 1332

Query: 474  IYNLLGSHINGHEQNVKLPDEGNSMSIKY----------LAKEG-----EILRKHFNANH 340
            +Y+LLGS +N ++Q VK P++   MS K           LA +G      +LR  F+   
Sbjct: 1333 VYDLLGSIVNLNQQ-VKFPNKDYEMSGKSIVQHLFAYDDLATKGCILPRTLLRNFFSLKD 1391

Query: 339  FWWMSKKLKDILRNYDINQQLSDLDEKMVTVALYFHPRSIEKIGSGPQEIKIGLSSKGGN 160
               +S  LK +L  YD++ QLS++D+ +V  AL FHPRS EKIG G  EIK+G  S+  N
Sbjct: 1392 IQKLSHSLKHMLNKYDVDCQLSEIDKTIVMAALSFHPRSSEKIGIGAHEIKVGYHSEYDN 1451

Query: 159  SRCFQLVRTDGSVEEFSYHKCIHHALELINPESAAEYQSLRSRWLN 22
            SRCF LVR DG+V +FSYHKC+H+AL+LI P+ A +Y+   S+WLN
Sbjct: 1452 SRCFVLVRKDGTVADFSYHKCVHNALQLIAPDWAKKYE---SKWLN 1494


>XP_009797463.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1
            [Nicotiana sylvestris] XP_009797464.1 PREDICTED:
            DNA-directed RNA polymerase IV subunit 1 isoform X1
            [Nicotiana sylvestris] XP_009797465.1 PREDICTED:
            DNA-directed RNA polymerase IV subunit 1 isoform X1
            [Nicotiana sylvestris] XP_009797466.1 PREDICTED:
            DNA-directed RNA polymerase IV subunit 1 isoform X1
            [Nicotiana sylvestris] XP_009797467.1 PREDICTED:
            DNA-directed RNA polymerase IV subunit 1 isoform X1
            [Nicotiana sylvestris]
          Length = 1447

 Score = 1597 bits (4135), Expect = 0.0
 Identities = 855/1476 (57%), Positives = 1055/1476 (71%), Gaps = 34/1476 (2%)
 Frame = -3

Query: 4347 MDTEYVEQQVPLGFLTGMEFNIVTEEDAEKISVKEIGAANDVTHPMLGLPNPTSSQCLTC 4168
            M+ + +EQQVP G L G+ FNI++E DA K++ K IG  N+VT P LG PNP   +C TC
Sbjct: 1    MEHDLIEQQVPSGTLKGIIFNILSETDAAKLAAKVIGVVNEVTDPALGFPNPIF-ECSTC 59

Query: 4167 DAKDVKTCEGHFGLIKFPFTILHPYFISDVAKVLNRICPGCKSVRR-RVKSASPTSTHHR 3991
             AKD K CEGHFGLI FPFTIL+PYFIS+VAK+LN++CPGCKSVRR +VK A  TS    
Sbjct: 60   GAKDGKKCEGHFGLINFPFTILNPYFISEVAKILNKVCPGCKSVRRDKVKGADTTSA--- 116

Query: 3990 PVPCKYCDVHLKNKYPRMNFKVSTKEIFGRTAIFAQINERLWIKSL--SLASDYWDFIPN 3817
               C YCD  L+  YP M FKVS K++FGRTAI A+++E+   ++   SLASDYW+FIP+
Sbjct: 117  ---CNYCDGILRG-YPPMKFKVSPKDMFGRTAIIAEVSEKKLQQTSGGSLASDYWNFIPD 172

Query: 3816 DPQQEEN-SLQPNKRVLSHLQVYHLLKDVDPRLLKDFVQDNKNSMFLSSFPVTPNSHRVN 3640
            D QQ+ + +    K+VL+H QVY +LKDVDP  L+  ++  KNS+FL S  +TPNSHRV 
Sbjct: 173  DAQQDASLNSSKYKKVLTHAQVYSILKDVDPGFLEGLLR-RKNSIFLKSCLLTPNSHRVT 231

Query: 3639 EFGQHMRFDERTRAYRKLVDFRGSANELSTRVLDCLKISKLRSEKSSSKAYAPKMFIQNE 3460
            EFGQHM FDE  R YRKL+DFRG+AN+LS  V + +K+SK+R+E+S          + N+
Sbjct: 232  EFGQHMIFDESNRLYRKLIDFRGTANDLSMCVFNRIKVSKIRAERS----------LTND 281

Query: 3459 DAAPKMSGLKYIKELILGKRTDHAFRMVVVGDPNIKVDEIGVPRHIAEAMQVSERLNSRN 3280
              AP  +GLKY+KEL+L KRT+HAFRMVVVGDPNIK+ EIG+P H+AE + ++E L+SRN
Sbjct: 282  PNAPA-TGLKYVKELVLAKRTNHAFRMVVVGDPNIKLGEIGIPCHVAEDLHMAEPLSSRN 340

Query: 3279 WTTLG----VRILAKGRTFIRREGGLVRVTLQNDTLQVGDTIYRPLRDRDIVLINRPPSI 3112
            W  L     + IL KG   +RR G LVR+++  D LQ GD IYRPL D D+VLINRPPSI
Sbjct: 341  WEKLSDHCDLMILQKGAIHVRRNGVLVRISVM-DQLQRGDIIYRPLIDGDVVLINRPPSI 399

Query: 3111 HPHSLIALHVKILPINSVLSLNPLICSPFRGDFDGDCYHGYVPQSVDSRVELHELVALNK 2932
            H HSLIAL V+ILPI SVLS+NPL+CSPFRGDFDGDC HGYVPQS+DSRVEL ELV LN+
Sbjct: 400  HQHSLIALSVRILPIISVLSINPLVCSPFRGDFDGDCLHGYVPQSIDSRVELSELVGLNR 459

Query: 2931 QLINGQTGQNLLSLSHDSLTAAQLVIEDGVLLDRFQMQQLQMFCTCPQQLQFPAVVKVPS 2752
            QLI+GQ+GQNLLSLSHDSLTAA L++E+GV LDRFQMQQLQMFC  P Q+  PA+V+ PS
Sbjct: 460  QLIDGQSGQNLLSLSHDSLTAAHLILEEGVFLDRFQMQQLQMFC--PHQVGMPAIVRAPS 517

Query: 2751 PNNYSNATSSDSCLWTGKQLFSLLLPPDFHYDFPSTGVHVSKGEVISSTGASSWLCDTNE 2572
             N            WTGKQLF L LP D   DFPS GV +S GE+++S+G SSWL D +E
Sbjct: 518  RNR---------SYWTGKQLFGLFLPSDLDCDFPSNGVCISDGEIVTSSGGSSWLRDASE 568

Query: 2571 NLLYRLVKHCQEEFLDFLNAAQGVLCEWLSMRGXXXXXXXXXXXXXXXSRKNMIDEVSCA 2392
            NL Y LVKH   + LD L AAQ VLCEWLSMRG               SR+NMIDEV C 
Sbjct: 569  NLFYSLVKHHGGDTLDLLYAAQAVLCEWLSMRGLSVSLSDLYISSDPYSRENMIDEVFCG 628

Query: 2391 LREAEHVSHIKLLMVDSNQDFLIGSFQESESSKDFGVDHMFYERQKSAALSQVSVSAFKQ 2212
            L+EAE +S+++LLM   N DFL GS + S+ +  F ++ M    QKSA+LSQ SV+AFKQ
Sbjct: 629  LQEAERLSYVQLLMTRYNHDFLAGSLEVSQKAMGFDLEFMSIMLQKSASLSQASVTAFKQ 688

Query: 2211 VFRDIQNLFYQYANEDNSFLAMLKAGSKKSNLTRAVQHGMCLGLQHSLVPLSFRIPRQLS 2032
            VFRDIQNL Y YA+++NSFLAMLKAGSK  NL + VQH MCLGLQ SLVPLSFR+PRQLS
Sbjct: 689  VFRDIQNLVYNYASKENSFLAMLKAGSK-GNLLKLVQHSMCLGLQQSLVPLSFRMPRQLS 747

Query: 2031 CAAWNSQKTLDSLNIAHDHPEYTKSYIPYAVVPSSFLTGLNPLECFVHSLTTRDSSFGGH 1852
            C AWN+ K       AH+ PE   SYIP AVV +SFL GLNPLECFVHSLTTRDSSF GH
Sbjct: 748  CDAWNNHKAHLPFEKAHNVPERPGSYIPCAVVENSFLAGLNPLECFVHSLTTRDSSFSGH 807

Query: 1851 ADISGTLTRRLMFFMRDLCIRYDGTVRNAYGNQVVQFSYNSKASSPNNNPDGSLNDSAYA 1672
            AD+SGTL R+LMFFMRDL I YDGTVRNAYGNQ+VQFSY       N +   S  + A +
Sbjct: 808  ADVSGTLNRKLMFFMRDLYIGYDGTVRNAYGNQIVQFSYY------NTDQIASTYNRA-S 860

Query: 1671 CAMGGQPVGXXXXXXXXXXXXXALDQPISALEASPLLNLKEILECG--GNKRNNTISLFL 1498
             A+GG PVG             ALD PI ALE SPLLNLK+ILE G   N    T SLFL
Sbjct: 861  HAIGGHPVGSLAACAISEAAYSALDLPIGALEPSPLLNLKKILEAGVKSNSSEKTASLFL 920

Query: 1497 SKKLRRWAHGFEYGALEVKSHLERVQLLDIVSTVMIMFSPKT--SRHTLPWVCHFHISKD 1324
            SK+L RWAHGFEYGALEVK HLER+ L DIVSTVMI FSP T  S H+ PWVCHFHI K+
Sbjct: 921  SKRLGRWAHGFEYGALEVKGHLERLLLSDIVSTVMICFSPGTYKSTHSSPWVCHFHIDKE 980

Query: 1323 MVKRKQIIVQSIIDALCMKCKSTQLKSKVYFPNLQITSKDCSEGN----DATICITVSIV 1156
             VK +++ ++S+IDAL M+ +ST++++ +  P+L IT KDCS       ++ ICI V++V
Sbjct: 981  YVKTRRLKLKSVIDALNMRYRSTRMEAGIDLPSLHITCKDCSVAEMQKANSKICIAVAVV 1040

Query: 1155 RSSKNSSIQLDTLKETVIPFLLGTVIKGSSNVKKVDILWKDPPNVSTSHKGSSGELYLRV 976
             +SK+S   LDTL++ VIPFLL TVIKG S  KKVDILW++ P+ S S +GS+GELYL+V
Sbjct: 1041 ETSKDSFSLLDTLRDLVIPFLLETVIKGFSAFKKVDILWRELPSTSKSSRGSTGELYLQV 1100

Query: 975  FMSETCDRTRFWGVLMDDCLQLMDMIDWKRSHPEDIHAATLALGIDVARKLFLSKLESAI 796
            FMSE+CDR  FW  L+D CL +MD+IDW+ SHP+++H  T+A G+DVA K FL  L SA+
Sbjct: 1101 FMSESCDRNNFWNALVDSCLHIMDLIDWEWSHPDNVHDLTVAYGVDVAWKYFLRNLNSAV 1160

Query: 795  SDTGKTILPEHLLLVSDCLSSTGEYVALSANGLARQRKQTSVSSPFTQACFSSPADCFVN 616
            S+TGK ILPEHL+L +DCL++TGE+V L+  GLA+QRK   V SPF QACFS P D FV 
Sbjct: 1161 SETGKKILPEHLVLAADCLTATGEFVPLNTKGLAQQRKCAGVISPFMQACFSHPGDSFVR 1220

Query: 615  AAKMGIVDDLQGSLDALSWGNTPSLGTGGQFDILYSGKGHEPDKPENIYNLLGSHINGHE 436
            AAK  + DDLQGSL+AL+WG TPS GTG  FDI+YSGKG+EP  P ++Y LLG+H+  ++
Sbjct: 1221 AAKTELSDDLQGSLEALAWGKTPSTGTGFSFDIIYSGKGYEPAAPTDVYALLGNHVTSNK 1280

Query: 435  QNVKLP-DEGNSMSIKYLAK---------------EGEI--LRKHFNANHFWWMSKKLKD 310
            Q VK+  DE N  + K LA+               +  I  LR   + N    +S+ LK 
Sbjct: 1281 QQVKVTLDEDNETADKALARRLCKLDDLNTKRCKSQWSIANLRSFLSFNDIKKLSQALKQ 1340

Query: 309  ILRNYDINQQLSDLDEKMVTVALYFHPRSIEKIGSGPQEIKIGLSSKGGNSRCFQLVRTD 130
            +L  Y I+++LS+ D+ +V +AL+FHPR  EKIG G  EIKIG   +  +SRCF LVRTD
Sbjct: 1341 MLSKYAIDRELSEADKSIVMMALHFHPRRSEKIGKGAMEIKIGYHKEYEDSRCFMLVRTD 1400

Query: 129  GSVEEFSYHKCIHHALELINPESAAEYQSLRSRWLN 22
            G+VE+FSY KC+ HALELI P+ A  Y     +WLN
Sbjct: 1401 GTVEDFSYRKCLQHALELIAPQKAKTY-----KWLN 1431


>XP_019231702.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1 [Nicotiana
            attenuata] XP_019231703.1 PREDICTED: DNA-directed RNA
            polymerase IV subunit 1 [Nicotiana attenuata] OIT28545.1
            dna-directed rna polymerase iv subunit 1 [Nicotiana
            attenuata]
          Length = 1447

 Score = 1596 bits (4133), Expect = 0.0
 Identities = 851/1476 (57%), Positives = 1057/1476 (71%), Gaps = 34/1476 (2%)
 Frame = -3

Query: 4347 MDTEYVEQQVPLGFLTGMEFNIVTEEDAEKISVKEIGAANDVTHPMLGLPNPTSSQCLTC 4168
            M+ + +EQQVP G L G+ FNI++E DA K++ K IGA N+VT P LG PNP   +C TC
Sbjct: 1    MEHDLIEQQVPSGTLRGIIFNILSETDAAKLAAKVIGAVNEVTDPALGFPNPIF-ECSTC 59

Query: 4167 DAKDVKTCEGHFGLIKFPFTILHPYFISDVAKVLNRICPGCKSVRR-RVKSASPTSTHHR 3991
             AKD K CEGHFGLI FPFTIL+PYFIS+VAK+LN++CPGCKSVRR +VK A  TS    
Sbjct: 60   GAKDGKKCEGHFGLINFPFTILNPYFISEVAKILNKVCPGCKSVRRDKVKGADTTSA--- 116

Query: 3990 PVPCKYCDVHLKNKYPRMNFKVSTKEIFGRTAIFAQINERLWIKSL--SLASDYWDFIPN 3817
               C YCD  L+  YP M FKVS K++FG+TAI A+++E+   ++   SLASDYW FIP+
Sbjct: 117  ---CNYCDGILRG-YPPMKFKVSPKDMFGKTAIIAEVSEKKLQQTSGGSLASDYWKFIPD 172

Query: 3816 DPQQEEN-SLQPNKRVLSHLQVYHLLKDVDPRLLKDFVQDNKNSMFLSSFPVTPNSHRVN 3640
            D QQ+ + +    K+VL+H QVY +LKDVDP  L+   +  KNS+FL S  +TPNSHRV 
Sbjct: 173  DAQQDASFNSSKYKKVLTHAQVYSILKDVDPGFLEGLFR-RKNSIFLKSCLLTPNSHRVT 231

Query: 3639 EFGQHMRFDERTRAYRKLVDFRGSANELSTRVLDCLKISKLRSEKSSSKAYAPKMFIQNE 3460
            EFGQHM FDE  R YRKL+DFRG+AN+LS  V + +K+SK+R+E+S          + N+
Sbjct: 232  EFGQHMIFDESNRLYRKLIDFRGTANDLSMCVFNRIKVSKIRAERS----------LTND 281

Query: 3459 DAAPKMSGLKYIKELILGKRTDHAFRMVVVGDPNIKVDEIGVPRHIAEAMQVSERLNSRN 3280
              AP  +GLKY+KEL+L KRT+HAFRMVVVGDPNIK+ EIG+P H+AE + ++E L+SRN
Sbjct: 282  PNAPA-TGLKYVKELVLAKRTNHAFRMVVVGDPNIKLGEIGIPCHVAEDLHMAEPLSSRN 340

Query: 3279 WTTL----GVRILAKGRTFIRREGGLVRVTLQNDTLQVGDTIYRPLRDRDIVLINRPPSI 3112
            W  L     + IL KG   +RR G LVR+++  D LQ GD IYRPL D D+VLINRPPSI
Sbjct: 341  WEKLTDHCDLMILQKGAIHVRRNGVLVRISVM-DQLQRGDIIYRPLIDGDVVLINRPPSI 399

Query: 3111 HPHSLIALHVKILPINSVLSLNPLICSPFRGDFDGDCYHGYVPQSVDSRVELHELVALNK 2932
            H HSLIAL V+ILPI SVLS+NPL+CSPFRGDFDGDC HGYVPQS+DSRVEL ELV LN+
Sbjct: 400  HQHSLIALSVRILPIISVLSINPLVCSPFRGDFDGDCLHGYVPQSIDSRVELSELVGLNR 459

Query: 2931 QLINGQTGQNLLSLSHDSLTAAQLVIEDGVLLDRFQMQQLQMFCTCPQQLQFPAVVKVPS 2752
            QLI+GQ+GQNLLSLSHDSLTAA L++E+GV LDRFQMQQLQMFC  P Q+  PA+V+ PS
Sbjct: 460  QLIDGQSGQNLLSLSHDSLTAAHLILEEGVFLDRFQMQQLQMFC--PHQVGMPAIVRAPS 517

Query: 2751 PNNYSNATSSDSCLWTGKQLFSLLLPPDFHYDFPSTGVHVSKGEVISSTGASSWLCDTNE 2572
             N            WTGKQLFSL LP D   DFPS GV +S GE+++S+G SSWL D +E
Sbjct: 518  RNR---------SYWTGKQLFSLFLPSDLDCDFPSNGVCISDGEIVTSSGGSSWLRDASE 568

Query: 2571 NLLYRLVKHCQEEFLDFLNAAQGVLCEWLSMRGXXXXXXXXXXXXXXXSRKNMIDEVSCA 2392
            NL Y LVKH   + LD L AAQ VLCEWLSMRG               SR+NMIDEV C 
Sbjct: 569  NLFYTLVKHHGGDTLDLLYAAQAVLCEWLSMRGLSVSLSDLYISSDPYSRENMIDEVFCG 628

Query: 2391 LREAEHVSHIKLLMVDSNQDFLIGSFQESESSKDFGVDHMFYERQKSAALSQVSVSAFKQ 2212
            L+EAE +S+++LLM   N DFL G  + S+ +  F ++ M   +Q SA+LSQ SV+AFKQ
Sbjct: 629  LQEAERLSYVQLLMTRYNHDFLAGRLEVSQKAMGFDLEFMSIMQQMSASLSQASVTAFKQ 688

Query: 2211 VFRDIQNLFYQYANEDNSFLAMLKAGSKKSNLTRAVQHGMCLGLQHSLVPLSFRIPRQLS 2032
            VFRDIQNL Y YA+++NSFLAMLKAGSK  NL + VQH MCLGLQ SLVPLSFR+PRQLS
Sbjct: 689  VFRDIQNLVYNYASKENSFLAMLKAGSK-GNLLKLVQHSMCLGLQQSLVPLSFRMPRQLS 747

Query: 2031 CAAWNSQKTLDSLNIAHDHPEYTKSYIPYAVVPSSFLTGLNPLECFVHSLTTRDSSFGGH 1852
            C AWN+ K       AH+ PE   SYIP AVV +SFL GLNPLECFVHSLTTRDSSF GH
Sbjct: 748  CDAWNNHKAHLPFEKAHNVPERPGSYIPCAVVENSFLAGLNPLECFVHSLTTRDSSFSGH 807

Query: 1851 ADISGTLTRRLMFFMRDLCIRYDGTVRNAYGNQVVQFSYNSKASSPNNNPDGSLNDSAYA 1672
            AD+SGTL R+LMFFMRDL I YDGTVRNAYGNQ+VQFSY +     +     + N +++A
Sbjct: 808  ADVSGTLNRKLMFFMRDLYIGYDGTVRNAYGNQIVQFSYYNADQIAS-----TYNHASHA 862

Query: 1671 CAMGGQPVGXXXXXXXXXXXXXALDQPISALEASPLLNLKEILECG--GNKRNNTISLFL 1498
              +GG PVG             ALD PI ALE SPLLNLK+ILE G   N    T SLFL
Sbjct: 863  --IGGHPVGSLAACAISEAAYSALDLPIGALEPSPLLNLKKILEAGVKSNSSEKTASLFL 920

Query: 1497 SKKLRRWAHGFEYGALEVKSHLERVQLLDIVSTVMIMFSPKT--SRHTLPWVCHFHISKD 1324
            S++L RWAHGFEYGALEVK HLER+ L DIVSTVMI FSP+T  S H+ PWVCHFHI K+
Sbjct: 921  SRRLGRWAHGFEYGALEVKGHLERLLLSDIVSTVMICFSPETCKSTHSSPWVCHFHIDKE 980

Query: 1323 MVKRKQIIVQSIIDALCMKCKSTQLKSKVYFPNLQITSKDCSEGN----DATICITVSIV 1156
             VK +++ ++S+IDAL M+ +ST++++ +  P+L IT KDCS       ++ ICI V++V
Sbjct: 981  YVKTRRLKLKSVIDALNMRYRSTRMEAGIDLPSLHITCKDCSVAGMQKANSKICIAVAVV 1040

Query: 1155 RSSKNSSIQLDTLKETVIPFLLGTVIKGSSNVKKVDILWKDPPNVSTSHKGSSGELYLRV 976
             +SK+S   LDTL++ VIPFLL TVIKG S  KKVDILW++ P+ S S +GS+GELYL+V
Sbjct: 1041 ETSKDSFSLLDTLRDLVIPFLLETVIKGFSAFKKVDILWRESPSTSKSSRGSTGELYLQV 1100

Query: 975  FMSETCDRTRFWGVLMDDCLQLMDMIDWKRSHPEDIHAATLALGIDVARKLFLSKLESAI 796
            FMS++CDR  FW  L+D CL +MD+IDW+RSHP+++H  T+A G+DVA K FL  L SA+
Sbjct: 1101 FMSQSCDRNNFWNALVDSCLHIMDLIDWERSHPDNVHDLTVAYGVDVAWKYFLRNLNSAV 1160

Query: 795  SDTGKTILPEHLLLVSDCLSSTGEYVALSANGLARQRKQTSVSSPFTQACFSSPADCFVN 616
            S+TGK ILPEHL+L +DCL++TGE+V L+  GLA+QRK   V SPF QACFS P D FV 
Sbjct: 1161 SETGKKILPEHLVLAADCLTATGEFVPLNTKGLAQQRKCAGVISPFMQACFSHPGDSFVR 1220

Query: 615  AAKMGIVDDLQGSLDALSWGNTPSLGTGGQFDILYSGKGHEPDKPENIYNLLGSHINGHE 436
            AAK  + DDLQGSL+AL+WG TPS GTG  FDI+YSGKG+EP  P ++Y LLG+H+  ++
Sbjct: 1221 AAKTELSDDLQGSLEALAWGKTPSTGTGFSFDIIYSGKGYEPAAPTDVYALLGNHVTSNK 1280

Query: 435  QNVKLP-DEGNSMSIKYLAK---------------EGEI--LRKHFNANHFWWMSKKLKD 310
            Q VK+  DE N  + K LA+               +  I  LR   + N    +S+ LK 
Sbjct: 1281 QKVKVTLDEDNETADKALARRLCKLDDLNTKRCKSQWSIANLRSFLSFNDIKKLSQALKQ 1340

Query: 309  ILRNYDINQQLSDLDEKMVTVALYFHPRSIEKIGSGPQEIKIGLSSKGGNSRCFQLVRTD 130
            +L  Y I+++LS+ D+ +V +AL+FHPR  EKIG G  EIKIG   +  +SRCF LVRTD
Sbjct: 1341 MLSKYAIDRELSEADKSIVMMALHFHPRRSEKIGKGAMEIKIGYHKEYEDSRCFMLVRTD 1400

Query: 129  GSVEEFSYHKCIHHALELINPESAAEYQSLRSRWLN 22
            G+VE+FSY KC+ HALELI P+ A  Y     +WLN
Sbjct: 1401 GTVEDFSYRKCLQHALELIAPQKAKTY-----KWLN 1431


>XP_006358858.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1
            [Solanum tuberosum] XP_015169636.1 PREDICTED:
            DNA-directed RNA polymerase IV subunit 1 isoform X1
            [Solanum tuberosum] XP_015169637.1 PREDICTED:
            DNA-directed RNA polymerase IV subunit 1 isoform X2
            [Solanum tuberosum]
          Length = 1446

 Score = 1596 bits (4132), Expect = 0.0
 Identities = 855/1476 (57%), Positives = 1053/1476 (71%), Gaps = 38/1476 (2%)
 Frame = -3

Query: 4332 VEQQVPLGFLTGMEFNIVTEEDAEKISVKEIGAANDVTHPMLGLPNPTSSQCLTCDAKDV 4153
            +EQQVP G LTG+ F+I++E DA K+S K IGA N+VT P LG PNP   QC TC A D 
Sbjct: 7    IEQQVPEGILTGINFSILSETDAAKLSAKVIGAVNEVTDPALGFPNPIF-QCTTCGANDG 65

Query: 4152 KTCEGHFGLIKFPFTILHPYFISDVAKVLNRICPGCKSVRR-RVKSASPTSTHHRPVPCK 3976
            K CEGHFGL+ FP+TIL+PYF+S+VA++L +ICPGCKSVRR +VK +  TS       CK
Sbjct: 66   KKCEGHFGLVNFPYTILNPYFVSEVAQILKKICPGCKSVRRDKVKGSDRTSA------CK 119

Query: 3975 YCDVHLKNKYPRMNFKVSTKEIFGRTAIFAQINERLWIK-----SLSLASDYWDFIPNDP 3811
            YCD  L+  YP   FKVS K++FGRTAI A++NE L  K      +SLASDYWDFIP D 
Sbjct: 120  YCDGVLRG-YPPTKFKVSPKDMFGRTAIIAEVNENLLKKVQQTTGVSLASDYWDFIPYDA 178

Query: 3810 QQEENSLQPN-KRVLSHLQVYHLLKDVDPRLLKDFVQDNKNSMFLSSFPVTPNSHRVNEF 3634
            QQE +    N KRVLSH QVY +LKD+DP  L+  ++  KNS+FL S  +TPNSHRV EF
Sbjct: 179  QQEASVNSSNYKRVLSHAQVYSILKDIDPGFLEGLLK-RKNSIFLKSCLLTPNSHRVTEF 237

Query: 3633 GQHMRFDERTRAYRKLVDFRGSANELSTRVLDCLKISKLRSEKSSSKAYAPKMFIQNEDA 3454
            GQHM FDE  R YRKL+DFRG+AN+LS  VLD +K+SK+R+++S          + N+  
Sbjct: 238  GQHMIFDESNRLYRKLIDFRGTANDLSMCVLDRIKVSKIRADRS----------VINDPN 287

Query: 3453 APKMSGLKYIKELILGKRTDHAFRMVVVGDPNIKVDEIGVPRHIAEAMQVSERLNSRNWT 3274
            AP  +GLKY+KEL+L KRT+HAFRMVVVGDPNI++ EIG+P H+AE + ++E L+ RNW 
Sbjct: 288  APA-TGLKYVKELVLAKRTNHAFRMVVVGDPNIELGEIGIPCHVAENLHMAESLSLRNWE 346

Query: 3273 TL----GVRILAKGRTFIRREGGLVRVTLQNDTLQVGDTIYRPLRDRDIVLINRPPSIHP 3106
             +     + IL +G   +RR G LVR+++  D LQ GD I+RPL D D+V+INRPPSIH 
Sbjct: 347  RMTDLCDLMILQRGGILVRRNGVLVRISVM-DRLQNGDIIHRPLIDGDVVMINRPPSIHQ 405

Query: 3105 HSLIALHVKILPINSVLSLNPLICSPFRGDFDGDCYHGYVPQSVDSRVELHELVALNKQL 2926
            HSLIAL V+ILPINSVLS+NPL+CSPFRGDFDGDC HGY+PQS+DSR+EL ELVAL +QL
Sbjct: 406  HSLIALSVRILPINSVLSINPLVCSPFRGDFDGDCLHGYIPQSIDSRIELSELVALKQQL 465

Query: 2925 INGQTGQNLLSLSHDSLTAAQLVIEDGVLLDRFQMQQLQMFCTCPQQLQFPAVVKVPSPN 2746
            ++GQ GQNLLSLSHDSLTAA L++E GV LDRFQMQQLQMFC  P+QL   A+VK P  N
Sbjct: 466  LDGQNGQNLLSLSHDSLTAAHLILEPGVFLDRFQMQQLQMFC--PRQLGMTAIVKAPPGN 523

Query: 2745 NYSNATSSDSCLWTGKQLFSLLLPPDFHYDFPSTGVHVSKGEVISSTGASSWLCDTNENL 2566
                      C WTGKQLFSLLLP D  Y FPS GV +S+GE+++S+G SSWL D ++NL
Sbjct: 524  ---------LCYWTGKQLFSLLLPSDLEYVFPSNGVCISEGEIVTSSGGSSWLRDVSDNL 574

Query: 2565 LYRLVKHCQEEFLDFLNAAQGVLCEWLSMRGXXXXXXXXXXXXXXXSRKNMIDEVSCALR 2386
             Y LVKH   + LD L AAQ VLCEWLSMRG               SR+NMIDEV   L+
Sbjct: 575  FYSLVKHHGGDTLDLLYAAQTVLCEWLSMRGLSVSLSDLYISSDSYSRENMIDEVCSGLQ 634

Query: 2385 EAEHVSHIKLLMVDSNQDFLIGSFQESESSKDFGVDHMFYERQKSAALSQVSVSAFKQVF 2206
            EAE +S+I+LLM+  N+DFL GS +ES++S  F  + M   +QKSA+LSQ S SAFK+VF
Sbjct: 635  EAERLSYIQLLMIKYNKDFLSGSLEESKNSMGFDFEFMSIMQQKSASLSQASASAFKKVF 694

Query: 2205 RDIQNLFYQYANEDNSFLAMLKAGSKKSNLTRAVQHGMCLGLQHSLVPLSFRIPRQLSCA 2026
            RDIQNL Y YA+ DNS LAMLKAGSK  NL + VQH MCLGLQ SLVP+SFR+PRQLSC 
Sbjct: 695  RDIQNLVYNYASNDNSLLAMLKAGSK-GNLLKLVQHSMCLGLQQSLVPVSFRMPRQLSCD 753

Query: 2025 AWNSQKTLDSLNIAHDHPEYTKSYIPYAVVPSSFLTGLNPLECFVHSLTTRDSSFGGHAD 1846
            AWN+ K+   +   H  PE   SYIP AVV SSFL GLNPLECFVHSLTTRDSSF GHAD
Sbjct: 754  AWNNHKSHLVIEKPHKVPECPGSYIPSAVVKSSFLAGLNPLECFVHSLTTRDSSFSGHAD 813

Query: 1845 ISGTLTRRLMFFMRDLCIRYDGTVRNAYGNQVVQFSYNSKASSPNNNPDGSLNDSAYACA 1666
            +SGTL R+LMFFMRDL + YDGTVRNAYGNQ+VQFSY       +    G   +S +  A
Sbjct: 814  VSGTLNRKLMFFMRDLYVGYDGTVRNAYGNQIVQFSYYEAEKIASTKGTGDALES-HNHA 872

Query: 1665 MGGQPVGXXXXXXXXXXXXXALDQPISALEASPLLNLKEILECGGNKRNN--TISLFLSK 1492
            +GG PVG             ALDQP+SALE+SPLLNLK+ILE G   R+   T S+FLSK
Sbjct: 873  IGGHPVGSLAACAISEAAYSALDQPVSALESSPLLNLKKILESGAGSRSGEKTASMFLSK 932

Query: 1491 KLRRWAHGFEYGALEVKSHLERVQLLDIVSTVMIMFSPKT--SRHTLPWVCHFHISKDMV 1318
            +L RWAHGFEYGALEVK HLER+ L ++VSTVMI FSP+T  S H  PWVCHFHI K+ V
Sbjct: 933  RLGRWAHGFEYGALEVKGHLERLLLSEVVSTVMICFSPETRKSTHNCPWVCHFHIDKENV 992

Query: 1317 KRKQIIVQSIIDALCMKCKSTQLKSKVYFPNLQITSKDCSEGN----DATICITVSIVRS 1150
            K +++ ++SI+DAL M+ ++   K     PNL IT KDCS        + ICITVS+V +
Sbjct: 993  KTRRLKLRSILDALNMRYRAATTKGGNDLPNLHITCKDCSVAEARKEKSEICITVSVVET 1052

Query: 1149 SKNSSIQLDTLKETVIPFLLGTVIKGSSNVKKVDILWKDPPNVSTSHKGSSGELYLRVFM 970
            SK+ S  LDTL++ VIPFLL TVIKG S  KKVDILWK+ P+ S S +GS+GELYL+VFM
Sbjct: 1053 SKDPSSLLDTLRDVVIPFLLETVIKGFSAFKKVDILWKELPSPSKSSRGSTGELYLQVFM 1112

Query: 969  SETCDRTRFWGVLMDDCLQLMDMIDWKRSHPEDIHAATLALGIDVARKLFLSKLESAISD 790
            SE+CDR +FW  L+D CLQ+ D+IDW+RS+P+D+H  T+A GIDVA + FL KL SA+S+
Sbjct: 1113 SESCDRIKFWNALVDSCLQIRDLIDWERSYPDDVHDLTVAYGIDVAWEYFLCKLHSAVSE 1172

Query: 789  TGKTILPEHLLLVSDCLSSTGEYVALSANGLARQRKQTSVSSPFTQACFSSPADCFVNAA 610
            TGK ILPEHL+L +D L++TGE+V LSA GL  QRK   V SPF QACFS+P D FV AA
Sbjct: 1173 TGKKILPEHLVLAADSLTATGEFVPLSAKGLTLQRKAAGVISPFMQACFSNPGDSFVRAA 1232

Query: 609  KMGIVDDLQGSLDALSWGNTPSLGTGGQFDILYSGKGHEPDKPENIYNLLGSHINGHEQN 430
            KMG+ D+LQGSL++L+WG TPS+GTG  FDI+YSGKG+EP +P ++Y LL +H+      
Sbjct: 1233 KMGLSDNLQGSLESLAWGKTPSIGTGSSFDIIYSGKGYEPAEPIDVYTLLQNHVTSGTPK 1292

Query: 429  VKLP-DEGNSMSIKYLAK---------------EGEI--LRKHFNANHFWWMSKKLKDIL 304
            VK+  DE   M  K LA+               E  I  LR   + N    +S+ LK +L
Sbjct: 1293 VKVTLDEDGGMDGKSLARRLDRLDDLNKKSCKSEWSITKLRSFISFNDIKKLSQSLKQML 1352

Query: 303  RNYDINQQLSDLDEKMVTVALYFHPRSIEKIGSG-PQEIKIGLSSKGGNSRCFQLVRTDG 127
              Y I+++L++ D+ +  +AL FHPR  EKIG G PQEIKIG   +  +SRCF LVR+DG
Sbjct: 1353 SKYAIDRELNEADKCIAMMALQFHPRRNEKIGKGAPQEIKIGYHKEYEDSRCFMLVRSDG 1412

Query: 126  SVEEFSYHKCIHHALELINPESAAEYQSLRSRWLNR 19
            SVE+FSY KC+ HALELI P+ A       SRWLNR
Sbjct: 1413 SVEDFSYRKCMQHALELIAPQKAK-----TSRWLNR 1443


>XP_019156683.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1
            [Ipomoea nil] XP_019156684.1 PREDICTED: DNA-directed RNA
            polymerase IV subunit 1 isoform X1 [Ipomoea nil]
            XP_019156685.1 PREDICTED: DNA-directed RNA polymerase IV
            subunit 1 isoform X1 [Ipomoea nil] XP_019156686.1
            PREDICTED: DNA-directed RNA polymerase IV subunit 1
            isoform X1 [Ipomoea nil]
          Length = 1448

 Score = 1594 bits (4127), Expect = 0.0
 Identities = 857/1477 (58%), Positives = 1059/1477 (71%), Gaps = 39/1477 (2%)
 Frame = -3

Query: 4335 YVEQQVPLGFLTGMEFNIVTEEDAEKISVKEIGAANDVTHPMLGLPNPTSSQCLTCDAKD 4156
            ++E  VP G L G++FNI++E DA KIS K I   N+VT P LGLPNP S +C TC AKD
Sbjct: 6    HIEYPVPSGVLRGIKFNILSESDAAKISAKVIELVNEVTDPALGLPNPVS-ECRTCGAKD 64

Query: 4155 VKTCEGHFGLIKFPFTILHPYFISDVAKVLNRICPGCKSVR-RRVKSASPTSTHHRPVPC 3979
            VK CEGHFGLIKFPFTI+ PYFIS+ A++LN+ICPGCKS R  +VK    TS   +   C
Sbjct: 65   VKGCEGHFGLIKFPFTIISPYFISEAARILNKICPGCKSARCDKVKRVDSTSMRQQHGNC 124

Query: 3978 KYCDVHLKNKYPRMNFKVSTKEIFGRTAIFAQINERLWIK------SLSLASDYWDFIPN 3817
            KYCD  LK+ YP+M F++S K++FG+ AI A+++E+L  K        SLASDYWD IP+
Sbjct: 125  KYCDGTLKD-YPQMRFRLSPKDMFGKPAIIAEVSEKLLRKFPNTTSGGSLASDYWDIIPH 183

Query: 3816 DPQQEENSLQPNKRVLSHLQVYHLLKDVDPRLLKDFVQDNKNSMFLSSFPVTPNSHRVNE 3637
            D  Q+E+S Q  KRVLS+ QVY LLKDVD RLL+ F++ ++ S+FLS F +TPN HRV E
Sbjct: 184  DAGQDESSRQSKKRVLSYAQVYSLLKDVDSRLLEAFLK-SRTSIFLSCFLLTPNCHRVTE 242

Query: 3636 FGQHMRFDERTRAYRKLVDFRGSANELSTRVLDCLKISKLRSEKSSSKAYAPKMFIQNED 3457
             G HM FDE  R YRKL+DFRG+AN+LS  V+D +K+SKLR+E+ +             D
Sbjct: 243  LGPHMLFDESNRLYRKLIDFRGAANDLSMHVIDRIKLSKLRAERQAII-----------D 291

Query: 3456 AAPKMSGLKYIKELILGKRTDHAFRMVVVGDPNIKVDEIGVPRHIAEAMQVSERLNSRNW 3277
             A   SGLK++KEL++ KR++HAFR+VVVGDP IK+ EIG+P H+AE++ V+E LN+ N 
Sbjct: 292  PAISTSGLKFLKELLIAKRSNHAFRLVVVGDPQIKLSEIGIPCHVAESLHVAEHLNTWNS 351

Query: 3276 TTL----GVRILAKGRTFIRREGGLVRVTLQNDTLQVGDTIYRPLRDRDIVLINRPPSIH 3109
              L     + IL KG   +RR  GLVRV++  D LQ GDTIYRPL D DIVLINRPPSIH
Sbjct: 352  EKLTEHCDLMILQKGWVLVRRNDGLVRVSML-DKLQKGDTIYRPLVDGDIVLINRPPSIH 410

Query: 3108 PHSLIALHVKILPINSVLSLNPLICSPFRGDFDGDCYHGYVPQSVDSRVELHELVALNKQ 2929
             HSLIAL V+ILPI S LS+NPLICSP RGDFDGDC HGYVPQS+D RVEL ELVAL+KQ
Sbjct: 411  QHSLIALSVRILPITSALSINPLICSPLRGDFDGDCLHGYVPQSMDCRVELRELVALDKQ 470

Query: 2928 LINGQTGQNLLSLSHDSLTAAQLVIEDGVLLDRFQMQQLQMFCTCPQQLQFPAVVKVPSP 2749
            L++GQ+G+NLLSLSHDSLTAA L++EDGVLL++ QMQQLQM  +CP+Q   PA+ K    
Sbjct: 471  LLDGQSGRNLLSLSHDSLTAAHLILEDGVLLNQCQMQQLQM--SCPRQFSLPAIFK---- 524

Query: 2748 NNYSNATSSDSCLWTGKQLFSLLLPPDFHYDFPSTGVHVSKGEVISSTGASSWLCDTNEN 2569
                 A S  SC WTGKQLFSLLLP DF Y FPS GV + KGE++SS G SSWL DT+ N
Sbjct: 525  -----ALSKGSCYWTGKQLFSLLLPSDFDYFFPSNGVCIRKGEIMSSNG-SSWLRDTDGN 578

Query: 2568 LLYRLVKHCQEEFLDFLNAAQGVLCEWLSMRGXXXXXXXXXXXXXXXSRKNMIDEVSCAL 2389
            L   LVKH  ++ L FL AAQ VLCEWLSMRG               +RKNM+ E+SC L
Sbjct: 579  LFRSLVKHYGDQVLHFLFAAQEVLCEWLSMRGLSVSLSDLYLSSDPSTRKNMVTEISCGL 638

Query: 2388 REAEHVSHIKLLMVDSNQDFLIGSFQESESSKDFGVDHMFYERQKSAALSQVSVSAFKQV 2209
            +EAE +S++ LLMVD  +DFL+G  + +++SK F V+ +  E+QKSAALSQ SV AFK V
Sbjct: 639  KEAERLSYVTLLMVDYTRDFLVGRSEGNQNSKIFDVERLSIEKQKSAALSQASVCAFKDV 698

Query: 2208 FRDIQNLFYQYANEDNSFLAMLKAGSKKSNLTRAVQHGMCLGLQHSLVPLSFRIPRQLSC 2029
            F DIQNL YQYAN+ NSFLAMLKAGSK  NL + VQ  MCLGLQHSL+PLSF+IP  LSC
Sbjct: 699  FWDIQNLLYQYANKGNSFLAMLKAGSK-GNLLKLVQQSMCLGLQHSLIPLSFQIPHHLSC 757

Query: 2028 AAWNSQKTLDSLNIAHDHPEYTKSYIPYAVVPSSFLTGLNPLECFVHSLTTRDSSFGGHA 1849
             AWN +K     N  HD  EY+ +YIP AVV +SFLTGLNPLECFVHSLTTR+SSF GHA
Sbjct: 758  GAWNDEK-----NHPHDIMEYSGTYIPCAVVENSFLTGLNPLECFVHSLTTRESSFSGHA 812

Query: 1848 DISGTLTRRLMFFMRDLCIRYDGTVRNAYGNQVVQFSYNSKASS-PNNNPDGSLNDSAYA 1672
            D+SGTLTR+L FFMRDL I YDGTVRN YGNQVVQFSY S+  S P   P+ ++   ++A
Sbjct: 813  DVSGTLTRKLTFFMRDLYIGYDGTVRNPYGNQVVQFSYYSREKSDPTIAPEDAVKSHSHA 872

Query: 1671 C-AMGGQPVGXXXXXXXXXXXXXALDQPISALEASPLLNLKEILECGGNKRNN--TISLF 1501
              A+GG PVG             ALDQPISALE+SPLLNLK++LE G  K +   + S+F
Sbjct: 873  SNAVGGHPVGSLAASAISEAAYSALDQPISALESSPLLNLKKVLESGVRKSSGEKSASMF 932

Query: 1500 LSKKLRRWAHGFEYGALEVKSHLERVQLLDIVSTVMIMFSPKTSR--HTLPWVCHFHISK 1327
            LSK L RWA+GFEYGALEVK+HLER+   D+VS VMI FS +TSR   T PWVCHFHI+K
Sbjct: 933  LSKMLGRWAYGFEYGALEVKNHLERLLFSDLVSEVMICFSRETSRSSRTSPWVCHFHINK 992

Query: 1326 DMVKRKQIIVQSIIDALCMKCKSTQLKSKVYFPNLQITSKDC----SEGNDATICITVSI 1159
            ++ KR+++ ++SI DAL M   +T++K+KV  PNLQIT  DC    +   D   CITV+I
Sbjct: 993  EIAKRRRLKLESITDALNMSYTATKVKAKVELPNLQITCTDCCVADTSKQDPKSCITVAI 1052

Query: 1158 VRSSKNSSIQLDTLKETVIPFLLGTVIKGSSNVKKVDILWKDP-PNVSTSHKGSSGELYL 982
            V  +K+S  +LD L++ VIPFLL TV+KG S  KKVDILW++  P +S S   SSGELYL
Sbjct: 1053 VGITKDSYPELDILRDFVIPFLLRTVVKGFSAFKKVDILWREEAPILSKSSIRSSGELYL 1112

Query: 981  RVFMSETCDRTRFWGVLMDDCLQLMDMIDWKRSHPEDIHAATLALGIDVARKLFLSKLES 802
            RV MSE CDRT+FW VL+D CLQ+M MIDW+RSHP+DIH  ++A GIDVA K FL  L S
Sbjct: 1113 RVLMSENCDRTKFWSVLVDSCLQIMTMIDWERSHPDDIHDISVAYGIDVAWKCFLRDLSS 1172

Query: 801  AISDTGKTILPEHLLLVSDCLSSTGEYVALSANGLARQRKQTSVSSPFTQACFSSPADCF 622
            A+SDTGK ILPEHL+L +DCLSS+G+++ALSA GL+ QRK+  VS+PFTQACFSSP + F
Sbjct: 1173 AVSDTGKIILPEHLVLATDCLSSSGQFLALSAKGLSFQRKENGVSTPFTQACFSSPGESF 1232

Query: 621  VNAAKMGIVDDLQGSLDALSWGNTPSLGTGGQFDILYSGKGHEPDKPENIYNLLGSHING 442
            + AAKMG+ DDL+G+ +ALSWG  P +GTG QFD+LYSGKG EP +  ++YNLLG H   
Sbjct: 1233 LKAAKMGLSDDLRGTAEALSWGKIPPVGTGFQFDVLYSGKGFEPSETTDVYNLLGKHAAL 1292

Query: 441  HEQNVKL-PDEGNSMSIKYLAK----------EGE------ILRKHFNANHFWWMSKKLK 313
             ++ + L P+E   +  K LA+          EGE       +   F  N    +SK L+
Sbjct: 1293 QKEKMMLYPEESKEIVSKPLAQRLCKYGDFYSEGENSLLPKAISSSFTLNDIQRLSKALR 1352

Query: 312  DILRNYDINQQLSDLDEKMVTVALYFHPRSIEKIGSGPQEIKIGLSSKGGNSRCFQLVRT 133
            +IL  YDIN  L + D+ +V  ALYFHPR  EKIG+G  EIK+G      NSRCF LVR+
Sbjct: 1353 NILYTYDINDHLKEADKSVVMRALYFHPRRSEKIGTGAHEIKVGQHKGHANSRCFLLVRS 1412

Query: 132  DGSVEEFSYHKCIHHALELINPESAAEYQSLRSRWLN 22
            DG+VE+FSYHKC+HHAL+LI P+ A  Y    SRWLN
Sbjct: 1413 DGTVEDFSYHKCVHHALKLIAPKKAKTY---HSRWLN 1446


>XP_018624246.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1
            [Nicotiana tomentosiformis]
          Length = 1447

 Score = 1588 bits (4113), Expect = 0.0
 Identities = 848/1476 (57%), Positives = 1056/1476 (71%), Gaps = 34/1476 (2%)
 Frame = -3

Query: 4347 MDTEYVEQQVPLGFLTGMEFNIVTEEDAEKISVKEIGAANDVTHPMLGLPNPTSSQCLTC 4168
            M+ + +EQQVP G L G+ FNI++E DA K++ K IG+ N+VT P LG PNP   +C TC
Sbjct: 1    MEHDLIEQQVPSGTLKGIIFNILSETDAAKLAAKVIGSVNEVTDPALGFPNPIF-ECSTC 59

Query: 4167 DAKDVKTCEGHFGLIKFPFTILHPYFISDVAKVLNRICPGCKSVRR-RVKSASPTSTHHR 3991
             AKD K CEGHFGLI FPFTIL+PYFIS+VAK+LN++CPGCKSVRR +VK A  TS    
Sbjct: 60   GAKDGKKCEGHFGLINFPFTILNPYFISEVAKILNKVCPGCKSVRRDKVKGADTTSA--- 116

Query: 3990 PVPCKYCDVHLKNKYPRMNFKVSTKEIFGRTAIFAQINERLWIKSL--SLASDYWDFIPN 3817
               C YCD  L+  YP M FKVS K++FG+TAI A+++E+   ++   SLASDYW+FIP+
Sbjct: 117  ---CNYCDGILRG-YPPMKFKVSPKDMFGKTAIMAEVSEKKLQQTCGGSLASDYWNFIPD 172

Query: 3816 DPQQEEN-SLQPNKRVLSHLQVYHLLKDVDPRLLKDFVQDNKNSMFLSSFPVTPNSHRVN 3640
            D QQ+ + +    KRVL+H QVY +LKDVDP  L+  ++  KNS+FL S  +TPNSHRV 
Sbjct: 173  DAQQDASLNSSKYKRVLTHAQVYSILKDVDPGFLEGLLR-RKNSIFLKSCLLTPNSHRVT 231

Query: 3639 EFGQHMRFDERTRAYRKLVDFRGSANELSTRVLDCLKISKLRSEKSSSKAYAPKMFIQNE 3460
            EFGQHM FDE  R YRKL+DFRG+AN+LS  V + +K+SK+R+E+S          + N+
Sbjct: 232  EFGQHMIFDESNRLYRKLIDFRGTANDLSMCVFNRIKVSKIRAERS----------LTND 281

Query: 3459 DAAPKMSGLKYIKELILGKRTDHAFRMVVVGDPNIKVDEIGVPRHIAEAMQVSERLNSRN 3280
              AP  +GLKY+KEL+L KRT+HAFRMVVVGDPNIK+ EIG+P H+AE + ++E L+SRN
Sbjct: 282  PNAPA-TGLKYVKELVLAKRTNHAFRMVVVGDPNIKLGEIGIPCHVAEDLHMAEPLSSRN 340

Query: 3279 WTTL----GVRILAKGRTFIRREGGLVRVTLQNDTLQVGDTIYRPLRDRDIVLINRPPSI 3112
            W  L     + IL KG   +RR G LVR+++  D LQ GD IYRPL D D+VLINRPPSI
Sbjct: 341  WEKLTDHCDLMILQKGAIHVRRNGVLVRISVM-DQLQRGDIIYRPLIDGDVVLINRPPSI 399

Query: 3111 HPHSLIALHVKILPINSVLSLNPLICSPFRGDFDGDCYHGYVPQSVDSRVELHELVALNK 2932
            H HSLIAL V+ILPI SVLS+NPL+CSPFRGDFDGDC HGYVPQS+DSRVEL ELV LN+
Sbjct: 400  HQHSLIALSVRILPIISVLSINPLVCSPFRGDFDGDCLHGYVPQSIDSRVELSELVGLNR 459

Query: 2931 QLINGQTGQNLLSLSHDSLTAAQLVIEDGVLLDRFQMQQLQMFCTCPQQLQFPAVVKVPS 2752
            QLI+GQ+GQNLLSLSHDSLTAA LV+E GV LDRFQ+QQLQMFC  P Q+  PA+V+ PS
Sbjct: 460  QLIDGQSGQNLLSLSHDSLTAAHLVLEGGVFLDRFQVQQLQMFC--PHQVGMPAIVRAPS 517

Query: 2751 PNNYSNATSSDSCLWTGKQLFSLLLPPDFHYDFPSTGVHVSKGEVISSTGASSWLCDTNE 2572
             N            WTGKQLFSL LP D   DFPS GV +S GE+++S+G SSWL D +E
Sbjct: 518  RNR---------SYWTGKQLFSLFLPSDLDCDFPSNGVCISDGEIVTSSGGSSWLRDASE 568

Query: 2571 NLLYRLVKHCQEEFLDFLNAAQGVLCEWLSMRGXXXXXXXXXXXXXXXSRKNMIDEVSCA 2392
            NL Y LVKH   + LD L AAQ VLCEWLSMRG               SR+NMIDEV C 
Sbjct: 569  NLFYSLVKHHGGDTLDLLYAAQAVLCEWLSMRGLSVSLSDLYISSDPYSRENMIDEVFCG 628

Query: 2391 LREAEHVSHIKLLMVDSNQDFLIGSFQESESSKDFGVDHMFYERQKSAALSQVSVSAFKQ 2212
            L+EAE +S+I+LLM   N DFL GS + S+ +  F ++ M   +QKSA+LSQ SVS+FK 
Sbjct: 629  LQEAERLSYIQLLMSRYNHDFLAGSLEVSQKAMGFNLEFMSIMQQKSASLSQASVSSFKH 688

Query: 2211 VFRDIQNLFYQYANEDNSFLAMLKAGSKKSNLTRAVQHGMCLGLQHSLVPLSFRIPRQLS 2032
            VFRDIQNL Y YA+++NSFLAMLKAGSK  NL + VQH MCLGLQ SLVPLSFR+PR+LS
Sbjct: 689  VFRDIQNLVYNYASKENSFLAMLKAGSK-GNLLKLVQHSMCLGLQQSLVPLSFRMPRRLS 747

Query: 2031 CAAWNSQKTLDSLNIAHDHPEYTKSYIPYAVVPSSFLTGLNPLECFVHSLTTRDSSFGGH 1852
            C AWN+ K       AH+ PE    YIP AVV +SFL GLNPLECFVHSLTTRDSSF GH
Sbjct: 748  CDAWNNHKAHLPFEKAHNVPERPGPYIPCAVVENSFLAGLNPLECFVHSLTTRDSSFSGH 807

Query: 1851 ADISGTLTRRLMFFMRDLCIRYDGTVRNAYGNQVVQFSYNSKASSPNNNPDGSLNDSAYA 1672
            AD+SGTL R+LMFFMRDL   YDGTVRNAYGNQ+VQFSY S      +    + N +++A
Sbjct: 808  ADVSGTLNRKLMFFMRDLYSGYDGTVRNAYGNQIVQFSYYSA-----DQISSTYNRASHA 862

Query: 1671 CAMGGQPVGXXXXXXXXXXXXXALDQPISALEASPLLNLKEILECG--GNKRNNTISLFL 1498
              +GG PVG             ALD P+ ALE SPLLNLK+ILE G   N    T +LFL
Sbjct: 863  --IGGHPVGSLAACAISEAAYSALDLPVGALEPSPLLNLKKILEAGVKSNSSEKTATLFL 920

Query: 1497 SKKLRRWAHGFEYGALEVKSHLERVQLLDIVSTVMIMFSPKT--SRHTLPWVCHFHISKD 1324
            S++L RWAHGFEYGA+EVK HLER+ L DIVSTVMI FSP+T  S H+ PWVCHFHI K+
Sbjct: 921  SRRLGRWAHGFEYGAIEVKGHLERLLLSDIVSTVMICFSPETCKSTHSSPWVCHFHIDKE 980

Query: 1323 MVKRKQIIVQSIIDALCMKCKSTQLKSKVYFPNLQITSKDCSEGN----DATICITVSIV 1156
             VK +++ ++S+IDAL M+ +ST++++ +  P+L IT KDCS       ++ ICITV++V
Sbjct: 981  YVKTRRLKLKSVIDALNMRYRSTRMEAGIDLPSLHITCKDCSAAEMQKANSKICITVAVV 1040

Query: 1155 RSSKNSSIQLDTLKETVIPFLLGTVIKGSSNVKKVDILWKDPPNVSTSHKGSSGELYLRV 976
             +SK+S   LDTL++ VIPFLL TVIKG S  KKVDILW++ P+ S S +GS+GELYL+V
Sbjct: 1041 ETSKDSFSLLDTLRDLVIPFLLETVIKGFSAFKKVDILWRELPSTSKSSRGSTGELYLQV 1100

Query: 975  FMSETCDRTRFWGVLMDDCLQLMDMIDWKRSHPEDIHAATLALGIDVARKLFLSKLESAI 796
            FMSE+CDR  FW  L+D CL +MD+IDW++SHP+++H  T+A G+DVA K FL  L SA+
Sbjct: 1101 FMSESCDRNNFWNALVDSCLHIMDLIDWEQSHPDNVHDLTVAYGVDVAWKYFLRNLNSAV 1160

Query: 795  SDTGKTILPEHLLLVSDCLSSTGEYVALSANGLARQRKQTSVSSPFTQACFSSPADCFVN 616
            S+TGK IL EHL+L +DCL++TGE+V L+  GLA+QRK   V SPF QACFS P D FV 
Sbjct: 1161 SETGKKILLEHLVLAADCLTATGEFVPLNTKGLAQQRKCAGVISPFMQACFSHPGDSFVR 1220

Query: 615  AAKMGIVDDLQGSLDALSWGNTPSLGTGGQFDILYSGKGHEPDKPENIYNLLGSHINGHE 436
            AAK  + DDLQGSL+AL+WG TPS GTG  FDI+YSGKG+EP  P ++Y LLG+H+  + 
Sbjct: 1221 AAKTELSDDLQGSLEALAWGKTPSTGTGFSFDIIYSGKGYEPAAPTDVYALLGNHVTSNR 1280

Query: 435  QNVKLP-DEGNSMSIKYLAK---------------EGEI--LRKHFNANHFWWMSKKLKD 310
            Q VK+  DE N  + K LA+               +  I  LR   + N    +S+ LK 
Sbjct: 1281 QQVKVTLDEDNETADKALARRLCKLDDLNTKRCKSQWSIANLRSFLSFNDIKKLSQALKQ 1340

Query: 309  ILRNYDINQQLSDLDEKMVTVALYFHPRSIEKIGSGPQEIKIGLSSKGGNSRCFQLVRTD 130
            +L  Y I+++LS+ D+ +V +AL+FHPR  EKIG G  EIKIG   +  +SRCF LVRTD
Sbjct: 1341 MLSKYAIDRELSEADKSIVMMALHFHPRRSEKIGKGAMEIKIGYHKEYEDSRCFMLVRTD 1400

Query: 129  GSVEEFSYHKCIHHALELINPESAAEYQSLRSRWLN 22
            G+VE+FSY KC+ HALELI P+ A  Y     +WLN
Sbjct: 1401 GTVEDFSYRKCLQHALELIAPQKAKTY-----KWLN 1431


>XP_016440347.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
            [Nicotiana tabacum] XP_016440348.1 PREDICTED:
            DNA-directed RNA polymerase IV subunit 1-like isoform X1
            [Nicotiana tabacum] XP_016440349.1 PREDICTED:
            DNA-directed RNA polymerase IV subunit 1-like isoform X1
            [Nicotiana tabacum] XP_016440350.1 PREDICTED:
            DNA-directed RNA polymerase IV subunit 1-like isoform X1
            [Nicotiana tabacum] XP_016440351.1 PREDICTED:
            DNA-directed RNA polymerase IV subunit 1-like isoform X1
            [Nicotiana tabacum]
          Length = 1447

 Score = 1587 bits (4109), Expect = 0.0
 Identities = 847/1476 (57%), Positives = 1055/1476 (71%), Gaps = 34/1476 (2%)
 Frame = -3

Query: 4347 MDTEYVEQQVPLGFLTGMEFNIVTEEDAEKISVKEIGAANDVTHPMLGLPNPTSSQCLTC 4168
            M+ + +EQQVP G L G+ FNI++E DA K++ K IG+ N+VT P LG PNP   +C TC
Sbjct: 1    MEHDLIEQQVPSGTLKGIIFNILSETDAAKLAAKVIGSVNEVTDPALGFPNPIF-ECSTC 59

Query: 4167 DAKDVKTCEGHFGLIKFPFTILHPYFISDVAKVLNRICPGCKSVRR-RVKSASPTSTHHR 3991
             AKD K CEGHFGLI FPFTIL+PYFIS+VAK+LN++CPGCKSVRR +VK A  TS    
Sbjct: 60   GAKDGKKCEGHFGLINFPFTILNPYFISEVAKILNKVCPGCKSVRRDKVKGADTTSA--- 116

Query: 3990 PVPCKYCDVHLKNKYPRMNFKVSTKEIFGRTAIFAQINERLWIKSL--SLASDYWDFIPN 3817
               C YCD  L+  YP M FKVS K++FG+TAI A+++E+   ++   SLASDYW+FIP+
Sbjct: 117  ---CNYCDGILRG-YPPMKFKVSPKDMFGKTAIMAEVSEKKLQQTCGGSLASDYWNFIPD 172

Query: 3816 DPQQEEN-SLQPNKRVLSHLQVYHLLKDVDPRLLKDFVQDNKNSMFLSSFPVTPNSHRVN 3640
            D QQ+ + +    KRVL+H QVY +LKDVDP  L+  ++  KNS+FL S  +TPNSHRV 
Sbjct: 173  DAQQDASLNSSKYKRVLTHAQVYSILKDVDPGFLEGLLR-RKNSIFLKSCLLTPNSHRVT 231

Query: 3639 EFGQHMRFDERTRAYRKLVDFRGSANELSTRVLDCLKISKLRSEKSSSKAYAPKMFIQNE 3460
            EFGQHM FDE  R YRKL+DFRG+AN+LS  V + +K+SK+R+E+S          + N+
Sbjct: 232  EFGQHMIFDESNRLYRKLIDFRGTANDLSMCVFNRIKVSKIRAERS----------LTND 281

Query: 3459 DAAPKMSGLKYIKELILGKRTDHAFRMVVVGDPNIKVDEIGVPRHIAEAMQVSERLNSRN 3280
              AP  +GLKY+KEL+L KRT+HAFRMVVVGDPNIK+ EIG+P H+AE + ++E L+SRN
Sbjct: 282  PNAPA-TGLKYVKELVLAKRTNHAFRMVVVGDPNIKLGEIGIPCHVAEDLHMAEPLSSRN 340

Query: 3279 WTTL----GVRILAKGRTFIRREGGLVRVTLQNDTLQVGDTIYRPLRDRDIVLINRPPSI 3112
            W  L     + IL KG   +RR G LVR+++  D LQ GD IYRPL D D+VLINRPPSI
Sbjct: 341  WEKLTDHCDLMILQKGAIHVRRNGVLVRISVM-DQLQRGDIIYRPLIDGDVVLINRPPSI 399

Query: 3111 HPHSLIALHVKILPINSVLSLNPLICSPFRGDFDGDCYHGYVPQSVDSRVELHELVALNK 2932
            H HSLIAL V+ILPI SVLS+NPL+CSPFRGDFDGDC HGYVPQS+DSRVEL ELV LN+
Sbjct: 400  HQHSLIALSVRILPIISVLSINPLVCSPFRGDFDGDCLHGYVPQSIDSRVELSELVGLNR 459

Query: 2931 QLINGQTGQNLLSLSHDSLTAAQLVIEDGVLLDRFQMQQLQMFCTCPQQLQFPAVVKVPS 2752
            QLI+GQ+GQNLLSLSHDSLTAA LV+E+GV LDRFQ+QQLQMFC  P Q+  PA+V+ P 
Sbjct: 460  QLIDGQSGQNLLSLSHDSLTAAHLVLEEGVFLDRFQVQQLQMFC--PHQVGMPAIVQAPL 517

Query: 2751 PNNYSNATSSDSCLWTGKQLFSLLLPPDFHYDFPSTGVHVSKGEVISSTGASSWLCDTNE 2572
             N            WTGKQLFSL LP D   DFPS GV +S GE+++S+G SSWL D +E
Sbjct: 518  RNR---------SYWTGKQLFSLFLPSDLDCDFPSNGVCISDGEIVTSSGGSSWLRDASE 568

Query: 2571 NLLYRLVKHCQEEFLDFLNAAQGVLCEWLSMRGXXXXXXXXXXXXXXXSRKNMIDEVSCA 2392
            NL Y LVKH   + LD L AAQ VLCEWLSMRG               SR+NMIDEV C 
Sbjct: 569  NLFYSLVKHHGGDTLDLLYAAQAVLCEWLSMRGLSVSLSDLYISSDPYSRENMIDEVFCG 628

Query: 2391 LREAEHVSHIKLLMVDSNQDFLIGSFQESESSKDFGVDHMFYERQKSAALSQVSVSAFKQ 2212
            L+EAE +S+I+LLM   N DFL GS + S+ +  F ++ M   +QKSA+LSQ SVS+FK 
Sbjct: 629  LQEAERLSYIQLLMSRYNHDFLAGSLEVSQKAMGFNLEFMSIMQQKSASLSQASVSSFKH 688

Query: 2211 VFRDIQNLFYQYANEDNSFLAMLKAGSKKSNLTRAVQHGMCLGLQHSLVPLSFRIPRQLS 2032
            VFRDIQNL Y YA+++NSFLAMLKAGSK  NL + VQH MCLGLQ SLVPLSFR+PR+LS
Sbjct: 689  VFRDIQNLVYNYASKENSFLAMLKAGSK-GNLLKLVQHSMCLGLQQSLVPLSFRMPRRLS 747

Query: 2031 CAAWNSQKTLDSLNIAHDHPEYTKSYIPYAVVPSSFLTGLNPLECFVHSLTTRDSSFGGH 1852
            C AWN+ K       AH+ PE    YIP AVV +SFL GLNPLECFVHSLTTRDSSF GH
Sbjct: 748  CDAWNNHKAHLPFEKAHNVPERPGPYIPCAVVENSFLAGLNPLECFVHSLTTRDSSFSGH 807

Query: 1851 ADISGTLTRRLMFFMRDLCIRYDGTVRNAYGNQVVQFSYNSKASSPNNNPDGSLNDSAYA 1672
            AD+SGTL R+LMFFMRDL   YDGTVRNAYGNQ+VQFSY S     +     + N +++A
Sbjct: 808  ADVSGTLNRKLMFFMRDLYSGYDGTVRNAYGNQIVQFSYYSAEQISS-----TYNRASHA 862

Query: 1671 CAMGGQPVGXXXXXXXXXXXXXALDQPISALEASPLLNLKEILECG--GNKRNNTISLFL 1498
              +GG PVG             ALD P+ ALE SPLLNLK+ILE G   N    T +LFL
Sbjct: 863  --IGGHPVGSLAACAISEAAYSALDLPVGALEPSPLLNLKKILEAGVKSNSSEKTATLFL 920

Query: 1497 SKKLRRWAHGFEYGALEVKSHLERVQLLDIVSTVMIMFSPKT--SRHTLPWVCHFHISKD 1324
            S++L RWAHGFEYGA+EVK HLER+ L DIVSTVMI FSP+T  S H+ PWVCHFHI K+
Sbjct: 921  SRRLGRWAHGFEYGAIEVKGHLERLLLSDIVSTVMICFSPETCKSTHSSPWVCHFHIDKE 980

Query: 1323 MVKRKQIIVQSIIDALCMKCKSTQLKSKVYFPNLQITSKDCSEGN----DATICITVSIV 1156
             VK +++ ++S+IDAL M+ +ST++++ +  P+L IT KDCS       ++ ICI V++V
Sbjct: 981  YVKTRRLKLKSVIDALNMRYRSTRMEAGIDLPSLHITCKDCSAAEMQKANSKICIAVAVV 1040

Query: 1155 RSSKNSSIQLDTLKETVIPFLLGTVIKGSSNVKKVDILWKDPPNVSTSHKGSSGELYLRV 976
             +SK+S   LDTL++ VIPFLL TVIKG S  KKVDILW++ P+ S S +GS+GELYL+V
Sbjct: 1041 ETSKDSFSLLDTLRDLVIPFLLETVIKGFSAFKKVDILWRELPSTSKSSRGSTGELYLQV 1100

Query: 975  FMSETCDRTRFWGVLMDDCLQLMDMIDWKRSHPEDIHAATLALGIDVARKLFLSKLESAI 796
            FMSE+CDR  FW  L+D CL +MD+IDW+RSHP+++H  T+A G+DVA K FL  L SA+
Sbjct: 1101 FMSESCDRNNFWNALVDSCLHIMDLIDWERSHPDNVHDLTVAYGVDVAWKYFLRNLNSAV 1160

Query: 795  SDTGKTILPEHLLLVSDCLSSTGEYVALSANGLARQRKQTSVSSPFTQACFSSPADCFVN 616
            S+TGK ILPEHL+L +DCL++TGE+V L+  GLA+QRK   V SPF QACFS P D FV 
Sbjct: 1161 SETGKKILPEHLVLAADCLTATGEFVPLNTKGLAQQRKCAGVISPFMQACFSHPGDSFVR 1220

Query: 615  AAKMGIVDDLQGSLDALSWGNTPSLGTGGQFDILYSGKGHEPDKPENIYNLLGSHINGHE 436
            AAK  + DDLQGSL+AL+WG TPS GTG  FDI+YS KG+EP  P ++Y LLG+H+  + 
Sbjct: 1221 AAKTELSDDLQGSLEALAWGKTPSTGTGFSFDIIYSEKGYEPAAPTDVYALLGNHVTSNR 1280

Query: 435  QNVKLP-DEGNSMSIKYLAK---------------EGEI--LRKHFNANHFWWMSKKLKD 310
            Q VK+  DE N  + K LA+               +  I  LR   + N    +S+ LK 
Sbjct: 1281 QKVKVTLDEDNETADKALARRLCKLDDLNTKRCKSQWSIANLRSFLSFNDIKKLSQALKQ 1340

Query: 309  ILRNYDINQQLSDLDEKMVTVALYFHPRSIEKIGSGPQEIKIGLSSKGGNSRCFQLVRTD 130
            +L  Y I+++LS+ D+ +V +AL+FHPR  EKIG G  EIKIG   +  +SRCF LVRTD
Sbjct: 1341 MLSKYAIDRELSEADKSIVMMALHFHPRRSEKIGKGAMEIKIGYHKEYEDSRCFMLVRTD 1400

Query: 129  GSVEEFSYHKCIHHALELINPESAAEYQSLRSRWLN 22
            G+VE+FSY KC+ HALELI P+ A  Y     +WLN
Sbjct: 1401 GTVEDFSYRKCLQHALELIAPQKAKTY-----KWLN 1431


>XP_019156687.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2
            [Ipomoea nil]
          Length = 1437

 Score = 1586 bits (4107), Expect = 0.0
 Identities = 855/1476 (57%), Positives = 1053/1476 (71%), Gaps = 38/1476 (2%)
 Frame = -3

Query: 4335 YVEQQVPLGFLTGMEFNIVTEEDAEKISVKEIGAANDVTHPMLGLPNPTSSQCLTCDAKD 4156
            ++E  VP G L G++FNI++E DA KIS K I   N+VT P LGLPNP S +C TC AKD
Sbjct: 6    HIEYPVPSGVLRGIKFNILSESDAAKISAKVIELVNEVTDPALGLPNPVS-ECRTCGAKD 64

Query: 4155 VKTCEGHFGLIKFPFTILHPYFISDVAKVLNRICPGCKSVR-RRVKSASPTSTHHRPVPC 3979
            VK CEGHFGLIKFPFTI+ PYFIS+ A++LN+ICPGCKS R  +VK    TS   +   C
Sbjct: 65   VKGCEGHFGLIKFPFTIISPYFISEAARILNKICPGCKSARCDKVKRVDSTSMRQQHGNC 124

Query: 3978 KYCDVHLKNKYPRMNFKVSTKEIFGRTAIFAQINERLWIK------SLSLASDYWDFIPN 3817
            KYCD  LK+ YP+M F++S K++FG+ AI A+++E+L  K        SLASDYWD IP+
Sbjct: 125  KYCDGTLKD-YPQMRFRLSPKDMFGKPAIIAEVSEKLLRKFPNTTSGGSLASDYWDIIPH 183

Query: 3816 DPQQEENSLQPNKRVLSHLQVYHLLKDVDPRLLKDFVQDNKNSMFLSSFPVTPNSHRVNE 3637
            D  Q+E+S Q  KRVLS+ QVY LLKDVD RLL+ F++ ++ S+FLS F +TPN HRV E
Sbjct: 184  DAGQDESSRQSKKRVLSYAQVYSLLKDVDSRLLEAFLK-SRTSIFLSCFLLTPNCHRVTE 242

Query: 3636 FGQHMRFDERTRAYRKLVDFRGSANELSTRVLDCLKISKLRSEKSSSKAYAPKMFIQNED 3457
             G HM FDE  R YRKL+DFRG+AN+LS  V+D +K+SKLR+E+ +             D
Sbjct: 243  LGPHMLFDESNRLYRKLIDFRGAANDLSMHVIDRIKLSKLRAERQAII-----------D 291

Query: 3456 AAPKMSGLKYIKELILGKRTDHAFRMVVVGDPNIKVDEIGVPRHIAEAMQVSERLNSRNW 3277
             A   SGLK++KEL++ KR++HAFR+VVVGDP IK+ EIG+P H+AE++ V+E LN+ N 
Sbjct: 292  PAISTSGLKFLKELLIAKRSNHAFRLVVVGDPQIKLSEIGIPCHVAESLHVAEHLNTWNS 351

Query: 3276 TTL----GVRILAKGRTFIRREGGLVRVTLQNDTLQVGDTIYRPLRDRDIVLINRPPSIH 3109
              L     + IL KG   +RR  GLVRV++  D LQ GDTIYRPL D DIVLINRPPSIH
Sbjct: 352  EKLTEHCDLMILQKGWVLVRRNDGLVRVSML-DKLQKGDTIYRPLVDGDIVLINRPPSIH 410

Query: 3108 PHSLIALHVKILPINSVLSLNPLICSPFRGDFDGDCYHGYVPQSVDSRVELHELVALNKQ 2929
             HSLIAL V+ILPI S LS+NPLICSP RGDFDGDC HGYVPQS+D RVEL ELVAL+KQ
Sbjct: 411  QHSLIALSVRILPITSALSINPLICSPLRGDFDGDCLHGYVPQSMDCRVELRELVALDKQ 470

Query: 2928 LINGQTGQNLLSLSHDSLTAAQLVIEDGVLLDRFQMQQLQMFCTCPQQLQFPAVVKVPSP 2749
            L++GQ+G+NLLSLSHDSLTAA L++EDGVLL++ QMQQLQM  +CP+Q   PA+ K    
Sbjct: 471  LLDGQSGRNLLSLSHDSLTAAHLILEDGVLLNQCQMQQLQM--SCPRQFSLPAIFK---- 524

Query: 2748 NNYSNATSSDSCLWTGKQLFSLLLPPDFHYDFPSTGVHVSKGEVISSTGASSWLCDTNEN 2569
                 A S  SC WTGKQLFSLLLP DF Y FPS GV + KGE++SS G SSWL DT+ N
Sbjct: 525  -----ALSKGSCYWTGKQLFSLLLPSDFDYFFPSNGVCIRKGEIMSSNG-SSWLRDTDGN 578

Query: 2568 LLYRLVKHCQEEFLDFLNAAQGVLCEWLSMRGXXXXXXXXXXXXXXXSRKNMIDEVSCAL 2389
            L   LVKH  ++ L FL AAQ VLCEWLSMRG               +RKNM+ E+SC L
Sbjct: 579  LFRSLVKHYGDQVLHFLFAAQEVLCEWLSMRGLSVSLSDLYLSSDPSTRKNMVTEISCGL 638

Query: 2388 REAEHVSHIKLLMVDSNQDFLIGSFQESESSKDFGVDHMFYERQKSAALSQVSVSAFKQV 2209
            +EAE +S++ LLMVD  +DFL+G  + +++SK F V+ +  E+QKSAALSQ SV AFK V
Sbjct: 639  KEAERLSYVTLLMVDYTRDFLVGRSEGNQNSKIFDVERLSIEKQKSAALSQASVCAFKDV 698

Query: 2208 FRDIQNLFYQYANEDNSFLAMLKAGSKKSNLTRAVQHGMCLGLQHSLVPLSFRIPRQLSC 2029
            F DIQNL YQYAN+ NSFLAMLKAGSK  NL + VQ  MCLGLQHSL+PLSF+IP  LSC
Sbjct: 699  FWDIQNLLYQYANKGNSFLAMLKAGSK-GNLLKLVQQSMCLGLQHSLIPLSFQIPHHLSC 757

Query: 2028 AAWNSQKTLDSLNIAHDHPEYTKSYIPYAVVPSSFLTGLNPLECFVHSLTTRDSSFGGHA 1849
             AWN +K     N  HD  EY+ +YIP AVV +SFLTGLNPLECFVHSLTTR+SSF GHA
Sbjct: 758  GAWNDEK-----NHPHDIMEYSGTYIPCAVVENSFLTGLNPLECFVHSLTTRESSFSGHA 812

Query: 1848 DISGTLTRRLMFFMRDLCIRYDGTVRNAYGNQVVQFSYNSKASS-PNNNPDGSLNDSAYA 1672
            D+SGTLTR+L FFMRDL I YDGTVRN YGNQVVQFSY S+  S P   P+         
Sbjct: 813  DVSGTLTRKLTFFMRDLYIGYDGTVRNPYGNQVVQFSYYSREKSDPTIAPED-------- 864

Query: 1671 CAMGGQPVGXXXXXXXXXXXXXALDQPISALEASPLLNLKEILECGGNKRNN--TISLFL 1498
              +GG PVG             ALDQPISALE+SPLLNLK++LE G  K +   + S+FL
Sbjct: 865  --VGGHPVGSLAASAISEAAYSALDQPISALESSPLLNLKKVLESGVRKSSGEKSASMFL 922

Query: 1497 SKKLRRWAHGFEYGALEVKSHLERVQLLDIVSTVMIMFSPKTSR--HTLPWVCHFHISKD 1324
            SK L RWA+GFEYGALEVK+HLER+   D+VS VMI FS +TSR   T PWVCHFHI+K+
Sbjct: 923  SKMLGRWAYGFEYGALEVKNHLERLLFSDLVSEVMICFSRETSRSSRTSPWVCHFHINKE 982

Query: 1323 MVKRKQIIVQSIIDALCMKCKSTQLKSKVYFPNLQITSKDC----SEGNDATICITVSIV 1156
            + KR+++ ++SI DAL M   +T++K+KV  PNLQIT  DC    +   D   CITV+IV
Sbjct: 983  IAKRRRLKLESITDALNMSYTATKVKAKVELPNLQITCTDCCVADTSKQDPKSCITVAIV 1042

Query: 1155 RSSKNSSIQLDTLKETVIPFLLGTVIKGSSNVKKVDILWKDP-PNVSTSHKGSSGELYLR 979
              +K+S  +LD L++ VIPFLL TV+KG S  KKVDILW++  P +S S   SSGELYLR
Sbjct: 1043 GITKDSYPELDILRDFVIPFLLRTVVKGFSAFKKVDILWREEAPILSKSSIRSSGELYLR 1102

Query: 978  VFMSETCDRTRFWGVLMDDCLQLMDMIDWKRSHPEDIHAATLALGIDVARKLFLSKLESA 799
            V MSE CDRT+FW VL+D CLQ+M MIDW+RSHP+DIH  ++A GIDVA K FL  L SA
Sbjct: 1103 VLMSENCDRTKFWSVLVDSCLQIMTMIDWERSHPDDIHDISVAYGIDVAWKCFLRDLSSA 1162

Query: 798  ISDTGKTILPEHLLLVSDCLSSTGEYVALSANGLARQRKQTSVSSPFTQACFSSPADCFV 619
            +SDTGK ILPEHL+L +DCLSS+G+++ALSA GL+ QRK+  VS+PFTQACFSSP + F+
Sbjct: 1163 VSDTGKIILPEHLVLATDCLSSSGQFLALSAKGLSFQRKENGVSTPFTQACFSSPGESFL 1222

Query: 618  NAAKMGIVDDLQGSLDALSWGNTPSLGTGGQFDILYSGKGHEPDKPENIYNLLGSHINGH 439
             AAKMG+ DDL+G+ +ALSWG  P +GTG QFD+LYSGKG EP +  ++YNLLG H    
Sbjct: 1223 KAAKMGLSDDLRGTAEALSWGKIPPVGTGFQFDVLYSGKGFEPSETTDVYNLLGKHAALQ 1282

Query: 438  EQNVKL-PDEGNSMSIKYLAK----------EGE------ILRKHFNANHFWWMSKKLKD 310
            ++ + L P+E   +  K LA+          EGE       +   F  N    +SK L++
Sbjct: 1283 KEKMMLYPEESKEIVSKPLAQRLCKYGDFYSEGENSLLPKAISSSFTLNDIQRLSKALRN 1342

Query: 309  ILRNYDINQQLSDLDEKMVTVALYFHPRSIEKIGSGPQEIKIGLSSKGGNSRCFQLVRTD 130
            IL  YDIN  L + D+ +V  ALYFHPR  EKIG+G  EIK+G      NSRCF LVR+D
Sbjct: 1343 ILYTYDINDHLKEADKSVVMRALYFHPRRSEKIGTGAHEIKVGQHKGHANSRCFLLVRSD 1402

Query: 129  GSVEEFSYHKCIHHALELINPESAAEYQSLRSRWLN 22
            G+VE+FSYHKC+HHAL+LI P+ A  Y    SRWLN
Sbjct: 1403 GTVEDFSYHKCVHHALKLIAPKKAKTY---HSRWLN 1435


>XP_018820498.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2
            [Juglans regia] XP_018820499.1 PREDICTED: DNA-directed
            RNA polymerase IV subunit 1 isoform X2 [Juglans regia]
            XP_018820500.1 PREDICTED: DNA-directed RNA polymerase IV
            subunit 1 isoform X2 [Juglans regia] XP_018820501.1
            PREDICTED: DNA-directed RNA polymerase IV subunit 1
            isoform X2 [Juglans regia]
          Length = 1475

 Score = 1573 bits (4073), Expect = 0.0
 Identities = 853/1495 (57%), Positives = 1058/1495 (70%), Gaps = 54/1495 (3%)
 Frame = -3

Query: 4347 MDTEYVE-QQVPLGFLTGMEFNIVTEEDAEKISVKEIGAANDVTHPMLGLPNPTSSQCLT 4171
            MD E+ E QQVP G +T + F+  T+ D EK SV  I A ++VT P LGLPNP SSQC T
Sbjct: 1    MDHEFSEEQQVPSGHITAIRFSFSTQTDTEKASVISIDAVSEVTDPKLGLPNP-SSQCST 59

Query: 4170 CDAKDVKTCEGHFGLIKFPFTILHPYFISDVAKVLNRICPGCKSVRR--RVKSASPTSTH 3997
            C A+D+K CEGHFG+IKFPFTILHPYF+S+VAK+LN+ICPGCKSVR+  +VK      +H
Sbjct: 60   CGARDLKYCEGHFGVIKFPFTILHPYFLSEVAKILNKICPGCKSVRQELKVKDGDSVRSH 119

Query: 3996 HRPVPCKYCDVHLKNKYPRMNFKVSTKEIFGRTAIFAQINERL----WIKSL-SLASDYW 3832
             +   CKYC  +    YP + FKVS+ E+F   AI  +INE+L      KS   L++D+W
Sbjct: 120  RQSKSCKYCAGNSVEWYPTVKFKVSSTEVFRNCAIIVEINEKLKNNVQKKSFRGLSADFW 179

Query: 3831 DFIPNDPQQEENSLQPNKRVLSHLQVYHLLKDVDPRLLKDFVQDNKNSMFLSSFPVTPNS 3652
            DFIP D QQEEN L+PN+RVLSH QV +LL DVDP+L+K FV     S+FL+ FPVTPN 
Sbjct: 180  DFIPKDEQQEENCLKPNRRVLSHAQVRYLLNDVDPKLIKKFVL-RIESLFLNCFPVTPNC 238

Query: 3651 HRVNEF------GQHMRFDERTRAYRKLVDFRGSANELSTRVLDCLKISKLRSEKSSSKA 3490
            HRV E       GQ + FD+RTRAY+KLVDFRG ANEL +RVLDCLKISKL SEK   K 
Sbjct: 239  HRVTEVTHAFSNGQRLVFDDRTRAYKKLVDFRGIANELGSRVLDCLKISKLSSEKLPDKF 298

Query: 3489 YAPKMFIQNEDAAPKMS-GLKYIKELILGKRTDHAFRMVVVGDPNIKVDEIGVPRHIAEA 3313
                   Q + A P +S GL++IK+++LGKR DH FRMVVVGDP+IK+ EIG+P HIAE 
Sbjct: 299  LVSVQ--QKKGADPSISSGLRWIKDVVLGKRNDHCFRMVVVGDPHIKLSEIGIPCHIAER 356

Query: 3312 MQVSERLNSRNWTTLG----VRILAKGRTFIRREGGLVRVTLQNDTLQVGDTIYRPLRDR 3145
            +Q+SE LN  N+  L     +  + KG  ++RR+G LVRV    + LQ+GDTIYRPL D 
Sbjct: 357  LQISESLNRWNFDKLSDCCRLCFIEKGEVYVRRKGSLVRVRRIAE-LQIGDTIYRPLNDG 415

Query: 3144 DIVLINRPPSIHPHSLIALHVKILPINSVLSLNPLICSPFRGDFDGDCYHGYVPQSVDSR 2965
            DI+LINRPPSIH HSLIAL VK+LP+ SVLS+NPL CSPFRGDFDGDC HGY+PQS+D+R
Sbjct: 416  DILLINRPPSIHQHSLIALSVKVLPVASVLSINPLCCSPFRGDFDGDCLHGYIPQSIDAR 475

Query: 2964 VELHELVALNKQLINGQTGQNLLSLSHDSLTAAQLVIEDGVLLDRFQMQQLQMFCTCPQQ 2785
            VEL ELVAL++QLINGQ G+NLLSLS DSLTAA LV+EDG+LL+ FQMQQLQMFC  P Q
Sbjct: 476  VELSELVALDRQLINGQNGRNLLSLSQDSLTAAHLVMEDGILLNLFQMQQLQMFC--PHQ 533

Query: 2784 LQFPAVVKVPSPNNYSNATSSDSCLWTGKQLFSLLLPPDFHYDFPSTGVHVSKGEVISST 2605
            L  PA+VK PS +++         +WTGKQLFS+LLPP F YDFPS GV+VS GE++SS 
Sbjct: 534  LPPPAIVKAPSLSSF---------IWTGKQLFSMLLPPGFEYDFPSNGVYVSNGELLSSE 584

Query: 2604 GASSWLCDTNENLLYRLVKHCQEEFLDFLNAAQGVLCEWLSMRGXXXXXXXXXXXXXXXS 2425
            G S WL D N NL   L+KHCQ + LDFL AAQ VLCEWLSMRG               S
Sbjct: 585  G-SFWLRDNNSNLFQSLIKHCQGKVLDFLYAAQEVLCEWLSMRGLSISLSDLYLSSNSSS 643

Query: 2424 RKNMIDEVSCALREAEHVSHIKLLMVDSNQDFLIGSFQESESSKDFGVDHMFYERQKSAA 2245
            RKNM+DE+ C L+EAE   + K LMVDS + FL+   +E+    D  V+ + YE+QKS+A
Sbjct: 644  RKNMMDEIFCGLQEAEQTCNFKQLMVDSCRYFLVEGGEENAVVLD--VERLCYEKQKSSA 701

Query: 2244 LSQVSVSAFKQVFRDIQNLFYQYANEDNSFLAMLKAGSKKSNLTRAVQHGMCLGLQHSLV 2065
            LSQ SV AFKQVFRDIQNL Y+YA++DNSF++M KAGSK  NL + VQH MCLGLQHSLV
Sbjct: 702  LSQASVDAFKQVFRDIQNLVYKYASKDNSFMSMFKAGSK-GNLLKLVQHSMCLGLQHSLV 760

Query: 2064 PLSFRIPRQLSCAAWNSQKTLDSLNIAHDHPEYTKSYIPYAVVPSSFLTGLNPLECFVHS 1885
            PLSFRIP QLSCAAWN+QK   S+  A D+PE+ ++YIPYAVV +SFLTGLNPLECFVHS
Sbjct: 761  PLSFRIPHQLSCAAWNNQKVYGSVQDADDNPEHVRTYIPYAVVENSFLTGLNPLECFVHS 820

Query: 1884 LTTRDSSFGGHADISGTLTRRLMFFMRDLCIRYDGTVRNAYGNQVVQFSYNSK--ASSPN 1711
            +T+RDSSF  +AD+ GTL RRLMF MRD+   YDGTVRNAYGNQ++QF YN    AS+P 
Sbjct: 821  VTSRDSSFSDNADLPGTLNRRLMFLMRDVYTAYDGTVRNAYGNQLIQFYYNHNKDASTPT 880

Query: 1710 NNPDGSLNDSAYA-CAMGGQPVGXXXXXXXXXXXXXALDQPISALEASPLLNLKEILECG 1534
            ++ D    +S  A   +GGQPVG             ALDQPIS LE SPLLNLK++LE G
Sbjct: 881  SSIDDLFGESVDAHYGIGGQPVGSLSASAISEAAYSALDQPISVLETSPLLNLKKVLESG 940

Query: 1533 GNKR--NNTISLFLSKKLRRWAHGFEYGALEVKSHLERVQLLDIVSTVMIMFSPKTSRHT 1360
              KR  N T+S++LS+KL R  HGFEYGALE+K+HLER+   +IVSTVMI+FSP+T    
Sbjct: 941  TRKRSANKTMSIYLSEKLGRQRHGFEYGALEIKNHLERLIFSEIVSTVMIIFSPQTCSKM 1000

Query: 1359 L--PWVCHFHISKDMVKRKQIIVQSIIDALCMKCKSTQLKSKVYFPNLQITSKDCSEG-- 1192
               PWVCHFHI K++ + + + V SII++L  + +    ++K   PNLQI SKDCS    
Sbjct: 1001 SFSPWVCHFHICKEIARMRGLKVHSIINSL--QKRYDYFRTKFKLPNLQIRSKDCSVNEA 1058

Query: 1191 --NDATICITVSIVRSSKNSSIQLDTLKETVIPFLLGTVIKGSSNVKKVDILWKDPPNVS 1018
              +D   CI V I   S+NSS+ LDT+++ VIPFLLGTVIKG   +KKV+ILW D   V 
Sbjct: 1059 REDDDIFCINVMIAEVSRNSSLPLDTVRDLVIPFLLGTVIKGYPEIKKVNILWNDWSKVP 1118

Query: 1017 TSHKGSSGELYLRVFMSETCDRTRFWGVLMDDCLQLMDMIDWKRSHPEDIHAATLALGID 838
                GSSGELYLRV MS     T  W +L +DCLQ+MDMI+W RSHP+ +H   LA GID
Sbjct: 1119 RCQHGSSGELYLRVAMSGDSQMTDLWSLLKNDCLQIMDMINWSRSHPDSVHDFCLAYGID 1178

Query: 837  VARKLFLSKLESAISDTGKTILPEHLLLVSDCLSSTGEYVALSANGLARQRKQTSVSSPF 658
               K FL++L+SAISDTGK++LP+HLLLV+D LS+TGE+V L+A G+A+QR+   VSSPF
Sbjct: 1179 AGWKYFLNRLDSAISDTGKSVLPQHLLLVADSLSATGEFVGLNAKGIAQQREHALVSSPF 1238

Query: 657  TQACFSSPADCFVNAAKMGIVDDLQGSLDALSWGNTPSLGTGGQFDILYSGKGHEPDKPE 478
             Q+CFS+P+ CF+ AAK GI+DDL+G +DAL+WG  PS GTG  FDI+YSGKG+E  +PE
Sbjct: 1239 MQSCFSNPSACFIKAAKAGIMDDLKGHIDALAWGKVPSTGTGSHFDIMYSGKGYELAQPE 1298

Query: 477  NIYNLLGSHINGHEQNV--KLPDEGNSMSIK----YLAKEG---------------EILR 361
            ++YNLLGS I   EQNV  K P   +S+S K    ++ K G                +LR
Sbjct: 1299 DVYNLLGSQIISDEQNVKTKTPVVHHSISAKCGTQFVYKYGGLAPKELKKMESISKSLLR 1358

Query: 360  KHFNANHFWWMSKKLKDILRNYDINQQLSDLDEKMVTVALYFHPRSIEKIGSGPQEIK-I 184
                +N    +S  LK IL  Y IN +L + D+  + +ALYFHPR  EKIGSG Q+IK I
Sbjct: 1359 SVLTSNDVHKLSHVLKGILHKYPINHRLDEKDKSTLMMALYFHPRRDEKIGSGAQDIKDI 1418

Query: 183  GLSS--KGGNSRCFQLVRTDGSVEEFSYHKCIHHALELINPESAAEYQSLRSRWL 25
             +SS  K  N+RCF+LVR DG+VE+FSYHKC+  ALE+I+P  A  Y   +S+WL
Sbjct: 1419 KVSSHPKYQNTRCFELVRMDGTVEDFSYHKCVLGALEMIDPRRAKSY---KSKWL 1470


>XP_018820497.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1
            [Juglans regia]
          Length = 1544

 Score = 1573 bits (4073), Expect = 0.0
 Identities = 853/1495 (57%), Positives = 1058/1495 (70%), Gaps = 54/1495 (3%)
 Frame = -3

Query: 4347 MDTEYVE-QQVPLGFLTGMEFNIVTEEDAEKISVKEIGAANDVTHPMLGLPNPTSSQCLT 4171
            MD E+ E QQVP G +T + F+  T+ D EK SV  I A ++VT P LGLPNP SSQC T
Sbjct: 70   MDHEFSEEQQVPSGHITAIRFSFSTQTDTEKASVISIDAVSEVTDPKLGLPNP-SSQCST 128

Query: 4170 CDAKDVKTCEGHFGLIKFPFTILHPYFISDVAKVLNRICPGCKSVRR--RVKSASPTSTH 3997
            C A+D+K CEGHFG+IKFPFTILHPYF+S+VAK+LN+ICPGCKSVR+  +VK      +H
Sbjct: 129  CGARDLKYCEGHFGVIKFPFTILHPYFLSEVAKILNKICPGCKSVRQELKVKDGDSVRSH 188

Query: 3996 HRPVPCKYCDVHLKNKYPRMNFKVSTKEIFGRTAIFAQINERL----WIKSL-SLASDYW 3832
             +   CKYC  +    YP + FKVS+ E+F   AI  +INE+L      KS   L++D+W
Sbjct: 189  RQSKSCKYCAGNSVEWYPTVKFKVSSTEVFRNCAIIVEINEKLKNNVQKKSFRGLSADFW 248

Query: 3831 DFIPNDPQQEENSLQPNKRVLSHLQVYHLLKDVDPRLLKDFVQDNKNSMFLSSFPVTPNS 3652
            DFIP D QQEEN L+PN+RVLSH QV +LL DVDP+L+K FV     S+FL+ FPVTPN 
Sbjct: 249  DFIPKDEQQEENCLKPNRRVLSHAQVRYLLNDVDPKLIKKFVL-RIESLFLNCFPVTPNC 307

Query: 3651 HRVNEF------GQHMRFDERTRAYRKLVDFRGSANELSTRVLDCLKISKLRSEKSSSKA 3490
            HRV E       GQ + FD+RTRAY+KLVDFRG ANEL +RVLDCLKISKL SEK   K 
Sbjct: 308  HRVTEVTHAFSNGQRLVFDDRTRAYKKLVDFRGIANELGSRVLDCLKISKLSSEKLPDKF 367

Query: 3489 YAPKMFIQNEDAAPKMS-GLKYIKELILGKRTDHAFRMVVVGDPNIKVDEIGVPRHIAEA 3313
                   Q + A P +S GL++IK+++LGKR DH FRMVVVGDP+IK+ EIG+P HIAE 
Sbjct: 368  LVSVQ--QKKGADPSISSGLRWIKDVVLGKRNDHCFRMVVVGDPHIKLSEIGIPCHIAER 425

Query: 3312 MQVSERLNSRNWTTLG----VRILAKGRTFIRREGGLVRVTLQNDTLQVGDTIYRPLRDR 3145
            +Q+SE LN  N+  L     +  + KG  ++RR+G LVRV    + LQ+GDTIYRPL D 
Sbjct: 426  LQISESLNRWNFDKLSDCCRLCFIEKGEVYVRRKGSLVRVRRIAE-LQIGDTIYRPLNDG 484

Query: 3144 DIVLINRPPSIHPHSLIALHVKILPINSVLSLNPLICSPFRGDFDGDCYHGYVPQSVDSR 2965
            DI+LINRPPSIH HSLIAL VK+LP+ SVLS+NPL CSPFRGDFDGDC HGY+PQS+D+R
Sbjct: 485  DILLINRPPSIHQHSLIALSVKVLPVASVLSINPLCCSPFRGDFDGDCLHGYIPQSIDAR 544

Query: 2964 VELHELVALNKQLINGQTGQNLLSLSHDSLTAAQLVIEDGVLLDRFQMQQLQMFCTCPQQ 2785
            VEL ELVAL++QLINGQ G+NLLSLS DSLTAA LV+EDG+LL+ FQMQQLQMFC  P Q
Sbjct: 545  VELSELVALDRQLINGQNGRNLLSLSQDSLTAAHLVMEDGILLNLFQMQQLQMFC--PHQ 602

Query: 2784 LQFPAVVKVPSPNNYSNATSSDSCLWTGKQLFSLLLPPDFHYDFPSTGVHVSKGEVISST 2605
            L  PA+VK PS +++         +WTGKQLFS+LLPP F YDFPS GV+VS GE++SS 
Sbjct: 603  LPPPAIVKAPSLSSF---------IWTGKQLFSMLLPPGFEYDFPSNGVYVSNGELLSSE 653

Query: 2604 GASSWLCDTNENLLYRLVKHCQEEFLDFLNAAQGVLCEWLSMRGXXXXXXXXXXXXXXXS 2425
            G S WL D N NL   L+KHCQ + LDFL AAQ VLCEWLSMRG               S
Sbjct: 654  G-SFWLRDNNSNLFQSLIKHCQGKVLDFLYAAQEVLCEWLSMRGLSISLSDLYLSSNSSS 712

Query: 2424 RKNMIDEVSCALREAEHVSHIKLLMVDSNQDFLIGSFQESESSKDFGVDHMFYERQKSAA 2245
            RKNM+DE+ C L+EAE   + K LMVDS + FL+   +E+    D  V+ + YE+QKS+A
Sbjct: 713  RKNMMDEIFCGLQEAEQTCNFKQLMVDSCRYFLVEGGEENAVVLD--VERLCYEKQKSSA 770

Query: 2244 LSQVSVSAFKQVFRDIQNLFYQYANEDNSFLAMLKAGSKKSNLTRAVQHGMCLGLQHSLV 2065
            LSQ SV AFKQVFRDIQNL Y+YA++DNSF++M KAGSK  NL + VQH MCLGLQHSLV
Sbjct: 771  LSQASVDAFKQVFRDIQNLVYKYASKDNSFMSMFKAGSK-GNLLKLVQHSMCLGLQHSLV 829

Query: 2064 PLSFRIPRQLSCAAWNSQKTLDSLNIAHDHPEYTKSYIPYAVVPSSFLTGLNPLECFVHS 1885
            PLSFRIP QLSCAAWN+QK   S+  A D+PE+ ++YIPYAVV +SFLTGLNPLECFVHS
Sbjct: 830  PLSFRIPHQLSCAAWNNQKVYGSVQDADDNPEHVRTYIPYAVVENSFLTGLNPLECFVHS 889

Query: 1884 LTTRDSSFGGHADISGTLTRRLMFFMRDLCIRYDGTVRNAYGNQVVQFSYNSK--ASSPN 1711
            +T+RDSSF  +AD+ GTL RRLMF MRD+   YDGTVRNAYGNQ++QF YN    AS+P 
Sbjct: 890  VTSRDSSFSDNADLPGTLNRRLMFLMRDVYTAYDGTVRNAYGNQLIQFYYNHNKDASTPT 949

Query: 1710 NNPDGSLNDSAYA-CAMGGQPVGXXXXXXXXXXXXXALDQPISALEASPLLNLKEILECG 1534
            ++ D    +S  A   +GGQPVG             ALDQPIS LE SPLLNLK++LE G
Sbjct: 950  SSIDDLFGESVDAHYGIGGQPVGSLSASAISEAAYSALDQPISVLETSPLLNLKKVLESG 1009

Query: 1533 GNKR--NNTISLFLSKKLRRWAHGFEYGALEVKSHLERVQLLDIVSTVMIMFSPKTSRHT 1360
              KR  N T+S++LS+KL R  HGFEYGALE+K+HLER+   +IVSTVMI+FSP+T    
Sbjct: 1010 TRKRSANKTMSIYLSEKLGRQRHGFEYGALEIKNHLERLIFSEIVSTVMIIFSPQTCSKM 1069

Query: 1359 L--PWVCHFHISKDMVKRKQIIVQSIIDALCMKCKSTQLKSKVYFPNLQITSKDCSEG-- 1192
               PWVCHFHI K++ + + + V SII++L  + +    ++K   PNLQI SKDCS    
Sbjct: 1070 SFSPWVCHFHICKEIARMRGLKVHSIINSL--QKRYDYFRTKFKLPNLQIRSKDCSVNEA 1127

Query: 1191 --NDATICITVSIVRSSKNSSIQLDTLKETVIPFLLGTVIKGSSNVKKVDILWKDPPNVS 1018
              +D   CI V I   S+NSS+ LDT+++ VIPFLLGTVIKG   +KKV+ILW D   V 
Sbjct: 1128 REDDDIFCINVMIAEVSRNSSLPLDTVRDLVIPFLLGTVIKGYPEIKKVNILWNDWSKVP 1187

Query: 1017 TSHKGSSGELYLRVFMSETCDRTRFWGVLMDDCLQLMDMIDWKRSHPEDIHAATLALGID 838
                GSSGELYLRV MS     T  W +L +DCLQ+MDMI+W RSHP+ +H   LA GID
Sbjct: 1188 RCQHGSSGELYLRVAMSGDSQMTDLWSLLKNDCLQIMDMINWSRSHPDSVHDFCLAYGID 1247

Query: 837  VARKLFLSKLESAISDTGKTILPEHLLLVSDCLSSTGEYVALSANGLARQRKQTSVSSPF 658
               K FL++L+SAISDTGK++LP+HLLLV+D LS+TGE+V L+A G+A+QR+   VSSPF
Sbjct: 1248 AGWKYFLNRLDSAISDTGKSVLPQHLLLVADSLSATGEFVGLNAKGIAQQREHALVSSPF 1307

Query: 657  TQACFSSPADCFVNAAKMGIVDDLQGSLDALSWGNTPSLGTGGQFDILYSGKGHEPDKPE 478
             Q+CFS+P+ CF+ AAK GI+DDL+G +DAL+WG  PS GTG  FDI+YSGKG+E  +PE
Sbjct: 1308 MQSCFSNPSACFIKAAKAGIMDDLKGHIDALAWGKVPSTGTGSHFDIMYSGKGYELAQPE 1367

Query: 477  NIYNLLGSHINGHEQNV--KLPDEGNSMSIK----YLAKEG---------------EILR 361
            ++YNLLGS I   EQNV  K P   +S+S K    ++ K G                +LR
Sbjct: 1368 DVYNLLGSQIISDEQNVKTKTPVVHHSISAKCGTQFVYKYGGLAPKELKKMESISKSLLR 1427

Query: 360  KHFNANHFWWMSKKLKDILRNYDINQQLSDLDEKMVTVALYFHPRSIEKIGSGPQEIK-I 184
                +N    +S  LK IL  Y IN +L + D+  + +ALYFHPR  EKIGSG Q+IK I
Sbjct: 1428 SVLTSNDVHKLSHVLKGILHKYPINHRLDEKDKSTLMMALYFHPRRDEKIGSGAQDIKDI 1487

Query: 183  GLSS--KGGNSRCFQLVRTDGSVEEFSYHKCIHHALELINPESAAEYQSLRSRWL 25
             +SS  K  N+RCF+LVR DG+VE+FSYHKC+  ALE+I+P  A  Y   +S+WL
Sbjct: 1488 KVSSHPKYQNTRCFELVRMDGTVEDFSYHKCVLGALEMIDPRRAKSY---KSKWL 1539


>XP_004245657.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1
            [Solanum lycopersicum] XP_010325435.1 PREDICTED:
            DNA-directed RNA polymerase IV subunit 1 isoform X1
            [Solanum lycopersicum]
          Length = 1446

 Score = 1572 bits (4071), Expect = 0.0
 Identities = 840/1475 (56%), Positives = 1045/1475 (70%), Gaps = 38/1475 (2%)
 Frame = -3

Query: 4332 VEQQVPLGFLTGMEFNIVTEEDAEKISVKEIGAANDVTHPMLGLPNPTSSQCLTCDAKDV 4153
            +EQQVP G L G+ F+I++E DA K+S K IGA N+VT P LG PNP   QC TC A D 
Sbjct: 7    IEQQVPDGILRGINFSILSETDAAKLSAKVIGAVNEVTDPALGFPNPIF-QCTTCGANDG 65

Query: 4152 KTCEGHFGLIKFPFTILHPYFISDVAKVLNRICPGCKSVRR-RVKSASPTSTHHRPVPCK 3976
            K CEGHFGL+ FP+TIL+PYF+S+VA++L +ICPGCKSVRR +VK +  TS       CK
Sbjct: 66   KKCEGHFGLVNFPYTILNPYFVSEVAQILKKICPGCKSVRRDKVKVSDRTSA------CK 119

Query: 3975 YCDVHLKNKYPRMNFKVSTKEIFGRTAIFAQINERLWIK-----SLSLASDYWDFIPNDP 3811
            YCD  L+  YP   FKVS K++FGRTAI A++NE L  K      +SLASDYWDFIP D 
Sbjct: 120  YCDGVLRG-YPPTKFKVSPKDMFGRTAIIAEVNENLLKKVQKTTGVSLASDYWDFIPYDA 178

Query: 3810 QQEENSLQPN-KRVLSHLQVYHLLKDVDPRLLKDFVQDNKNSMFLSSFPVTPNSHRVNEF 3634
            QQE +    N KRVLSH QVY +LKD+DP  L+  ++  KNS+FL S  +TPNSHRV EF
Sbjct: 179  QQEASVNSSNYKRVLSHAQVYSILKDIDPGFLEGLLR-RKNSIFLKSCLLTPNSHRVTEF 237

Query: 3633 GQHMRFDERTRAYRKLVDFRGSANELSTRVLDCLKISKLRSEKSSSKAYAPKMFIQNEDA 3454
            GQHM FDE  R YRKL+DFRG+AN+LS  VLD +K+SK+R+++S          + N+  
Sbjct: 238  GQHMIFDESNRLYRKLIDFRGTANDLSMCVLDRIKVSKIRADRS----------VINDPN 287

Query: 3453 APKMSGLKYIKELILGKRTDHAFRMVVVGDPNIKVDEIGVPRHIAEAMQVSERLNSRNWT 3274
            AP  +GLKY+KEL+L KRT+HAFRMVVVGDPNI++ EIG+P H+AE + ++E L+ RNW 
Sbjct: 288  APA-TGLKYVKELVLAKRTNHAFRMVVVGDPNIELGEIGIPCHVAENLHMAETLSLRNWE 346

Query: 3273 TL----GVRILAKGRTFIRREGGLVRVTLQNDTLQVGDTIYRPLRDRDIVLINRPPSIHP 3106
             +     + IL +G   +RR G LVR+++  D LQ GD I+RPL D D+V+INRPPSIH 
Sbjct: 347  RMTDLCDLMILQRGGILVRRNGVLVRISVM-DGLQKGDIIHRPLVDGDVVMINRPPSIHQ 405

Query: 3105 HSLIALHVKILPINSVLSLNPLICSPFRGDFDGDCYHGYVPQSVDSRVELHELVALNKQL 2926
            HSLIAL V+ILPINSVLS+NPL+CSPFRGDFDGDC HGY+PQS+DS +EL ELVAL +QL
Sbjct: 406  HSLIALSVRILPINSVLSINPLVCSPFRGDFDGDCLHGYIPQSIDSTIELSELVALKQQL 465

Query: 2925 INGQTGQNLLSLSHDSLTAAQLVIEDGVLLDRFQMQQLQMFCTCPQQLQFPAVVKVPSPN 2746
            ++GQ GQNLLSLSHDSLTAA L++E GV LDRFQMQQLQMFC  P+QL   A+VK P  N
Sbjct: 466  LDGQNGQNLLSLSHDSLTAAHLILEPGVFLDRFQMQQLQMFC--PRQLGMTAIVKAPPGN 523

Query: 2745 NYSNATSSDSCLWTGKQLFSLLLPPDFHYDFPSTGVHVSKGEVISSTGASSWLCDTNENL 2566
                      C WTGKQLFSLLLP D  Y FPS GV +S+GE+++S+G SSWL D ++NL
Sbjct: 524  ---------ICYWTGKQLFSLLLPSDLEYVFPSNGVCISEGEIVTSSGGSSWLRDASDNL 574

Query: 2565 LYRLVKHCQEEFLDFLNAAQGVLCEWLSMRGXXXXXXXXXXXXXXXSRKNMIDEVSCALR 2386
             Y LVKH   + LD L AAQ VLCEWLSMRG               SR+NMIDEV   L+
Sbjct: 575  FYSLVKHNGGDTLDLLYAAQTVLCEWLSMRGLSVSLSDLYISADSYSRENMIDEVCSGLQ 634

Query: 2385 EAEHVSHIKLLMVDSNQDFLIGSFQESESSKDFGVDHMFYERQKSAALSQVSVSAFKQVF 2206
            EAE +S+I+LLM+  N+DFL G+ +ES++S  F  + M   +QKSA+LSQ S SAFK+VF
Sbjct: 635  EAERLSYIQLLMIKYNKDFLSGNLEESKNSMGFDFEFMSIMQQKSASLSQASASAFKKVF 694

Query: 2205 RDIQNLFYQYANEDNSFLAMLKAGSKKSNLTRAVQHGMCLGLQHSLVPLSFRIPRQLSCA 2026
            RDIQNL Y YA+ DNS LAMLKAGSK  NL + VQH MCLGLQ SLVP+SFR+PRQLSC 
Sbjct: 695  RDIQNLVYNYASNDNSLLAMLKAGSK-GNLLKLVQHNMCLGLQQSLVPVSFRMPRQLSCD 753

Query: 2025 AWNSQKTLDSLNIAHDHPEYTKSYIPYAVVPSSFLTGLNPLECFVHSLTTRDSSFGGHAD 1846
            AWN+ K+   +   H  PE   SYIP AVV SSFL GLNPLECFVHSLTTRDSSF GHAD
Sbjct: 754  AWNNHKSHLVIEKPHKVPECPGSYIPSAVVKSSFLAGLNPLECFVHSLTTRDSSFSGHAD 813

Query: 1845 ISGTLTRRLMFFMRDLCIRYDGTVRNAYGNQVVQFSYNSKASSPNNNPDGSLNDSAYACA 1666
            +SGTL R+LMFFMRDL + YDGTVRNAYGNQ+VQFSY       +    G   +S +  A
Sbjct: 814  VSGTLNRKLMFFMRDLYVGYDGTVRNAYGNQIVQFSYYEAEQIASTKVTGEALES-HNHA 872

Query: 1665 MGGQPVGXXXXXXXXXXXXXALDQPISALEASPLLNLKEILECGGNKRNN--TISLFLSK 1492
            +GG PVG             ALDQP+SALE+SPLLNLK+ILE G   R    T S+FLSK
Sbjct: 873  IGGHPVGSLAACAISEAAYCALDQPVSALESSPLLNLKKILESGAGSRTGEKTASMFLSK 932

Query: 1491 KLRRWAHGFEYGALEVKSHLERVQLLDIVSTVMIMFSPKT--SRHTLPWVCHFHISKDMV 1318
            +L RWAHGFEYGALEVK HLER+ L ++VSTVMI FSP+T  S H  PWVCHFHI K+ V
Sbjct: 933  RLGRWAHGFEYGALEVKGHLERLLLSEVVSTVMICFSPETRKSTHNCPWVCHFHIDKENV 992

Query: 1317 KRKQIIVQSIIDALCMKCKSTQLKSKVYFPNLQITSKDCS----EGNDATICITVSIVRS 1150
            K +++ ++S++DAL M+ ++   K+    PNL IT KDCS    +   + ICITVS+V +
Sbjct: 993  KTRRLKLRSVLDALNMRYRAATTKAGNDLPNLHITCKDCSVAEVQKEKSEICITVSVVET 1052

Query: 1149 SKNSSIQLDTLKETVIPFLLGTVIKGSSNVKKVDILWKDPPNVSTSHKGSSGELYLRVFM 970
            SK+ S  LDTL++ VIPFLL TVIKG S  KKVDILWK+ P+ S S +G +GELYL+VFM
Sbjct: 1053 SKDPSSLLDTLRDVVIPFLLETVIKGFSAFKKVDILWKELPSPSKSSRGPTGELYLQVFM 1112

Query: 969  SETCDRTRFWGVLMDDCLQLMDMIDWKRSHPEDIHAATLALGIDVARKLFLSKLESAISD 790
            SE+CDR +FW  L+D CLQ+ D+IDW+RS+P+D+H  T+A GIDVA + FL KL SA+S+
Sbjct: 1113 SESCDRIKFWNALVDSCLQIRDLIDWERSYPDDVHDLTVAYGIDVAWEYFLCKLHSAVSE 1172

Query: 789  TGKTILPEHLLLVSDCLSSTGEYVALSANGLARQRKQTSVSSPFTQACFSSPADCFVNAA 610
            TGK ILPEHL+L +D L++TGE+V LSA GL  QRK   V SPF QACF++P D FV AA
Sbjct: 1173 TGKKILPEHLVLAADSLTTTGEFVPLSAKGLTLQRKAAGVVSPFMQACFTNPGDSFVRAA 1232

Query: 609  KMGIVDDLQGSLDALSWGNTPSLGTGGQFDILYSGKGHEPDKPENIYNLLGSHINGHEQN 430
            KMG+ DDLQGSL++L+WG TPS+GTG  FDI+YSGKG+E  +  N+Y LL + +     N
Sbjct: 1233 KMGLSDDLQGSLESLAWGKTPSIGTGSSFDIMYSGKGYELAEQINVYTLLRNLVTVDTPN 1292

Query: 429  VK--LPDEGNSMSIKYLAKEGEI----------------LRKHFNANHFWWMSKKLKDIL 304
            VK  L  +G    +  + +   +                LR +F+ N    +S+ LK +L
Sbjct: 1293 VKVTLGKDGGMDGMSLVRRLDRLDDLDKKSCKSELSFTKLRSYFSFNDIKKLSQSLKQML 1352

Query: 303  RNYDINQQLSDLDEKMVTVALYFHPRSIEKIGSG-PQEIKIGLSSKGGNSRCFQLVRTDG 127
              YDI ++L++ D+ +  +AL FHPR  EKIG G P+EIKIG   +   SRCF +VR+D 
Sbjct: 1353 SKYDIGRELNEADKCLAMMALQFHPRRNEKIGKGAPKEIKIGYHQEFEGSRCFMVVRSDD 1412

Query: 126  SVEEFSYHKCIHHALELINPESAAEYQSLRSRWLN 22
            +VE+FSY KC+ HALELI P+ A       SRWLN
Sbjct: 1413 TVEDFSYRKCMQHALELIAPQKAK-----TSRWLN 1442


>XP_015085574.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1 [Solanum
            pennellii] XP_015085575.1 PREDICTED: DNA-directed RNA
            polymerase IV subunit 1 [Solanum pennellii]
            XP_015085576.1 PREDICTED: DNA-directed RNA polymerase IV
            subunit 1 [Solanum pennellii] XP_015085577.1 PREDICTED:
            DNA-directed RNA polymerase IV subunit 1 [Solanum
            pennellii]
          Length = 1446

 Score = 1571 bits (4069), Expect = 0.0
 Identities = 840/1475 (56%), Positives = 1050/1475 (71%), Gaps = 38/1475 (2%)
 Frame = -3

Query: 4332 VEQQVPLGFLTGMEFNIVTEEDAEKISVKEIGAANDVTHPMLGLPNPTSSQCLTCDAKDV 4153
            +EQQVP G L G+ F+I++E DA K+S K IGA N+VT P LG PNP   QC TC A D 
Sbjct: 7    IEQQVPDGILRGINFSILSETDAAKLSAKVIGAVNEVTDPALGFPNPIF-QCTTCGANDG 65

Query: 4152 KTCEGHFGLIKFPFTILHPYFISDVAKVLNRICPGCKSVRR-RVKSASPTSTHHRPVPCK 3976
            K CEGHFGL+ FP+TIL+PYF+S+VA++L +ICPGCKSVRR +VK +  TS       CK
Sbjct: 66   KKCEGHFGLVNFPYTILNPYFVSEVAQILKKICPGCKSVRRDKVKVSDRTSA------CK 119

Query: 3975 YCDVHLKNKYPRMNFKVSTKEIFGRTAIFAQINERLWIK-----SLSLASDYWDFIPNDP 3811
            YCD  L+  YP   FKVS K++FGRTAI A++NE L  K      +SLASDYWDFIP D 
Sbjct: 120  YCDGVLRG-YPPTKFKVSPKDMFGRTAIIAEVNENLLKKVQKTTGVSLASDYWDFIPYDA 178

Query: 3810 QQEENSLQPN-KRVLSHLQVYHLLKDVDPRLLKDFVQDNKNSMFLSSFPVTPNSHRVNEF 3634
            QQE +    N KRVLSH QVY +LKD+DP  L+  ++  KNS+FL S  +TPNSHRV EF
Sbjct: 179  QQEASVNSSNYKRVLSHAQVYSILKDIDPGFLEGLLR-RKNSIFLKSCLLTPNSHRVTEF 237

Query: 3633 GQHMRFDERTRAYRKLVDFRGSANELSTRVLDCLKISKLRSEKSSSKAYAPKMFIQNEDA 3454
            GQHM FDE  R YRKL+DFRG+AN+LS  VLD +K+SK+R+++S          + N+  
Sbjct: 238  GQHMIFDESNRLYRKLIDFRGTANDLSMCVLDRIKVSKIRADRS----------VINDPN 287

Query: 3453 APKMSGLKYIKELILGKRTDHAFRMVVVGDPNIKVDEIGVPRHIAEAMQVSERLNSRNWT 3274
            AP  +GLKY+KEL+L KRT+HAFRMVVVGDPNI++ EIG+P H+AE + ++E L+ RNW 
Sbjct: 288  APA-TGLKYVKELVLAKRTNHAFRMVVVGDPNIELGEIGIPCHVAENLHMAETLSLRNWE 346

Query: 3273 TL----GVRILAKGRTFIRREGGLVRVTLQNDTLQVGDTIYRPLRDRDIVLINRPPSIHP 3106
             +     + IL +G   +RR G LVR+++  D LQ GD I+RPL D D+V+INRPPSIH 
Sbjct: 347  RMTDLCDLMILQRGGILVRRNGVLVRISVM-DGLQKGDIIHRPLVDGDVVMINRPPSIHQ 405

Query: 3105 HSLIALHVKILPINSVLSLNPLICSPFRGDFDGDCYHGYVPQSVDSRVELHELVALNKQL 2926
            HSLIAL V+ILPINSVLS+NPL+CSPFRGDFDGDC HGY+PQS+DS +EL ELVAL +QL
Sbjct: 406  HSLIALSVRILPINSVLSINPLVCSPFRGDFDGDCLHGYIPQSIDSTIELSELVALKQQL 465

Query: 2925 INGQTGQNLLSLSHDSLTAAQLVIEDGVLLDRFQMQQLQMFCTCPQQLQFPAVVKVPSPN 2746
            ++GQ GQNLLSLSHDSLTAA L++E GV LDRFQMQQLQMFC  P+QL   A+VK P  N
Sbjct: 466  LDGQNGQNLLSLSHDSLTAAHLILEPGVFLDRFQMQQLQMFC--PRQLGMTAIVKAPPGN 523

Query: 2745 NYSNATSSDSCLWTGKQLFSLLLPPDFHYDFPSTGVHVSKGEVISSTGASSWLCDTNENL 2566
                      C WTGKQLFSLLLP D  Y FPS GV +S+GE+++S+G SSWL D ++NL
Sbjct: 524  ---------ICYWTGKQLFSLLLPSDLEYVFPSNGVCISEGEIVTSSGGSSWLRDASDNL 574

Query: 2565 LYRLVKHCQEEFLDFLNAAQGVLCEWLSMRGXXXXXXXXXXXXXXXSRKNMIDEVSCALR 2386
             Y LVKH   + LD L AAQ VLCEWLSMRG               SR+NMIDEV   L+
Sbjct: 575  FYSLVKHNGGDTLDLLYAAQTVLCEWLSMRGLSVSLSDLYISADSYSRENMIDEVCSGLQ 634

Query: 2385 EAEHVSHIKLLMVDSNQDFLIGSFQESESSKDFGVDHMFYERQKSAALSQVSVSAFKQVF 2206
            EAE +S+I+LLM+  N+DFL G+ +ES++S  F  + M   +QKSA+LSQ S SAFK+VF
Sbjct: 635  EAERLSYIQLLMIKYNKDFLSGNLEESKNSLGFDFEFMSIMQQKSASLSQASASAFKKVF 694

Query: 2205 RDIQNLFYQYANEDNSFLAMLKAGSKKSNLTRAVQHGMCLGLQHSLVPLSFRIPRQLSCA 2026
            RDIQNL Y YA+ DNS LAMLKAGSK  NL + VQH MCLGLQ SLVP+SFR+PRQLSC 
Sbjct: 695  RDIQNLVYNYASNDNSLLAMLKAGSK-GNLLKLVQHSMCLGLQQSLVPVSFRMPRQLSCD 753

Query: 2025 AWNSQKTLDSLNIAHDHPEYTKSYIPYAVVPSSFLTGLNPLECFVHSLTTRDSSFGGHAD 1846
            AWN+ K+   +   H  PE   SYIP AVV +SFL GLNPLECFVHSLTTRDSSF GHAD
Sbjct: 754  AWNNHKSHLVIEKPHKVPECPGSYIPSAVVKNSFLAGLNPLECFVHSLTTRDSSFSGHAD 813

Query: 1845 ISGTLTRRLMFFMRDLCIRYDGTVRNAYGNQVVQFSYNSKASSPNNNPDGSLNDSAYACA 1666
            +SGTL R+LMFFMRDL + YDGTVRNAYGNQ+VQFSY       +    G   +S +  A
Sbjct: 814  VSGTLNRKLMFFMRDLYVGYDGTVRNAYGNQIVQFSYYEAEQIASTKVTGEALES-HNHA 872

Query: 1665 MGGQPVGXXXXXXXXXXXXXALDQPISALEASPLLNLKEILECGGNKRNN--TISLFLSK 1492
            +GG PVG             ALDQP+SALE+SPLLNLK+ILE G   R    T S+FLSK
Sbjct: 873  IGGHPVGSLAACAISEAAYSALDQPVSALESSPLLNLKKILESGAGSRTGEKTASMFLSK 932

Query: 1491 KLRRWAHGFEYGALEVKSHLERVQLLDIVSTVMIMFSPKT--SRHTLPWVCHFHISKDMV 1318
            +L RWAHGFEYGALEVK HLER+ L ++VSTVMI FSP+T  S H  PWVCHFHI K+ V
Sbjct: 933  RLGRWAHGFEYGALEVKGHLERLLLSEVVSTVMICFSPETRKSTHNCPWVCHFHIDKENV 992

Query: 1317 KRKQIIVQSIIDALCMKCKSTQLKSKVYFPNLQITSKDCS----EGNDATICITVSIVRS 1150
            K +++ ++S++DAL M+ ++   K+    PNL IT KDCS    +   + ICITVS+V +
Sbjct: 993  KTRRLKLRSVLDALNMRYRAATTKAGNDLPNLHITCKDCSVAEAQKEKSEICITVSVVET 1052

Query: 1149 SKNSSIQLDTLKETVIPFLLGTVIKGSSNVKKVDILWKDPPNVSTSHKGSSGELYLRVFM 970
            SK+ S  LDTL++ VIPFLL TVIKG S  KKVDILWK+ P+ S S +GS+GELYL+VFM
Sbjct: 1053 SKDPSSLLDTLRDVVIPFLLDTVIKGFSAFKKVDILWKELPSPSKSSRGSTGELYLQVFM 1112

Query: 969  SETCDRTRFWGVLMDDCLQLMDMIDWKRSHPEDIHAATLALGIDVARKLFLSKLESAISD 790
            SE+CDR +FW  L+D CLQ+ D+IDW+RS+P+D+H  T+A GID+A + FL KL SA+S+
Sbjct: 1113 SESCDRIKFWNALVDSCLQIRDLIDWERSYPDDVHDLTVAYGIDLAWEYFLCKLHSAVSE 1172

Query: 789  TGKTILPEHLLLVSDCLSSTGEYVALSANGLARQRKQTSVSSPFTQACFSSPADCFVNAA 610
            TGK ILPEHL+L +D L++TGE+V LSA GL  QRK   V SPF QACF++P D FV AA
Sbjct: 1173 TGKKILPEHLVLAADSLTATGEFVPLSAKGLTLQRKAAGVVSPFMQACFTNPGDSFVRAA 1232

Query: 609  KMGIVDDLQGSLDALSWGNTPSLGTGGQFDILYSGKGHEPDKPENIYNLLGSHINGHEQN 430
            KMG+ DDLQGSL++L+WG TPS+GTG  FDI+YSGKG+E  +  N+Y LL + +     N
Sbjct: 1233 KMGLSDDLQGSLESLAWGKTPSIGTGSSFDIMYSGKGYELAEQINVYTLLRNLVTVDTPN 1292

Query: 429  VKLP------DEGNSMS--------IKYLAKEGEI----LRKHFNANHFWWMSKKLKDIL 304
            VK+        +G S++        +   + + E+    LR +F+ N    +S+ LK +L
Sbjct: 1293 VKVTLGKDGGMDGTSLARRLDRLDDLDKKSCKSELSFTKLRSYFSFNDIKKLSQSLKQML 1352

Query: 303  RNYDINQQLSDLDEKMVTVALYFHPRSIEKIGSG-PQEIKIGLSSKGGNSRCFQLVRTDG 127
              YDI ++L++ D+ +  +AL FHPR  EKIG G P+EIKIG   +   SRCF +VR+D 
Sbjct: 1353 SKYDIGRELNEADKCLAMMALQFHPRRNEKIGKGAPKEIKIGYHQEYEGSRCFMVVRSDD 1412

Query: 126  SVEEFSYHKCIHHALELINPESAAEYQSLRSRWLN 22
            +VE+FSY KC+ HALELI P+ A       SRWLN
Sbjct: 1413 TVEDFSYRKCMQHALELIAPQKAK-----TSRWLN 1442


>XP_016567800.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
            [Capsicum annuum]
          Length = 1449

 Score = 1547 bits (4005), Expect = 0.0
 Identities = 839/1481 (56%), Positives = 1044/1481 (70%), Gaps = 44/1481 (2%)
 Frame = -3

Query: 4332 VEQQVPLGFLTGMEFNIVTEEDAEKISVKEIGAANDVTHPMLGLPNPTSSQCLTCDAKDV 4153
            +EQQVP G L G+ F+I+TE DA K++ K IGA N+VT P LG PNP   QC TC A D 
Sbjct: 7    IEQQVPEGILKGINFSILTETDAVKLAAKVIGAVNEVTDPALGFPNPIF-QCSTCGASDG 65

Query: 4152 KTCEGHFGLIKFPFTILHPYFISDVAKVLNRICPGCKSVRR-RVKSASPTSTHHRPVPCK 3976
            K CEGHFGLIKFP+TIL+PYF+S+VA++L ++CPGCKS+RR +VK A  TS       CK
Sbjct: 66   KKCEGHFGLIKFPYTILNPYFVSEVAQILKKVCPGCKSLRRDKVKGADKTSA------CK 119

Query: 3975 YCDVHLKNKYPRMNFKVSTKEIFGRTAIFAQINERLW-----IKSLSLASDYWDFIPNDP 3811
            YCD  L   YP   FKVS K++FG+TAI A++NE        I  +SLASDYWDFIP+D 
Sbjct: 120  YCDGTLG--YPPTKFKVSPKDMFGKTAIIAEVNENALKKQREITGVSLASDYWDFIPHDA 177

Query: 3810 QQEENSLQPN-KRVLSHLQVYHLLKDVDPRLLKDFVQDNKNSMFLSSFPVTPNSHRVNEF 3634
            QQ+ +    N KRVLSH QVY +LKDVDP  L+  ++  KNS+F+ +  +TPN HRV EF
Sbjct: 178  QQDASLSSSNYKRVLSHAQVYSILKDVDPGFLEGLLK-RKNSIFMQNCLLTPNCHRVTEF 236

Query: 3633 GQHMRFDERTRAYRKLVDFRGSANELSTRVLDCLKISKLRSEKSSSKAYAPKMFIQNEDA 3454
            GQHM FDE  R YRKL+DFRG+AN+LS  V D +K+SK+R+E+S          I N+ A
Sbjct: 237  GQHMIFDESNRLYRKLIDFRGTANDLSVCVFDRIKVSKIRAERS----------IINDPA 286

Query: 3453 APKMSGLKYIKELILGKRTDHAFRMVVVGDPNIKVDEIGVPRHIAEAMQVSERLNSRNWT 3274
            AP  +GLKY+KEL+L KRT+HAFRMVVVGDPNI++ EIG+P H+AE + ++E L+SRNW 
Sbjct: 287  APA-TGLKYVKELVLAKRTNHAFRMVVVGDPNIELGEIGIPCHVAENLHMAEPLSSRNWE 345

Query: 3273 TL----GVRILAKGRTFIRREGGLVRVTLQNDTLQVGDTIYRPLRDRDIVLINRPPSIHP 3106
             +     + IL KG   +RR+G L+RV++  D LQ GD I+RPL D D+VLINRPPSIH 
Sbjct: 346  KMTDLCDLMILQKGGILVRRKGVLIRVSVM-DQLQRGDVIHRPLVDGDVVLINRPPSIHQ 404

Query: 3105 HSLIALHVKILPINSVLSLNPLICSPFRGDFDGDCYHGYVPQSVDSRVELHELVALNKQL 2926
            HSLIAL V+ILP+NSVLS+NPL+CSPFRGDFDGD  HGYVPQS+DSR+EL ELVALN+QL
Sbjct: 405  HSLIALSVRILPVNSVLSINPLVCSPFRGDFDGDSLHGYVPQSIDSRIELSELVALNQQL 464

Query: 2925 INGQTGQNLLSLSHDSLTAAQLVIEDGVLLDRFQMQQLQMFCTCPQQLQFPAVVKVPSPN 2746
            I+GQ GQNLLSLSHDSLTAA L++E  V LDR QMQQLQMFC  P+Q+   A+++ PS  
Sbjct: 465  IDGQNGQNLLSLSHDSLTAANLILEPTVFLDRVQMQQLQMFC--PRQMGMNAIIRAPSGK 522

Query: 2745 NYSNATSSDSCLWTGKQLFSLLLPPDFHYDFPSTGVHVSKGEVISSTGASSWLCDTNENL 2566
            +Y          WTGKQLFSLLLP D  Y FPS GV +S+GE+++S+  SSWL D +ENL
Sbjct: 523  SY----------WTGKQLFSLLLPSDLEYVFPSNGVCISEGEILTSSSGSSWLRDASENL 572

Query: 2565 LYRLVKHCQEEFLDFLNAAQGVLCEWLSMRGXXXXXXXXXXXXXXXSRKNMIDEVSCALR 2386
             Y LVKH   + LD L AAQ VL EWLSMRG               SR+NMIDEV   L+
Sbjct: 573  FYSLVKHHGGDTLDLLYAAQAVLGEWLSMRGLSVSLSDLYISSDLFSRENMIDEVISGLQ 632

Query: 2385 EAEHVSHIKLLMVDSNQDFLIGSFQESESSKDFGVDHMFYERQKSAALSQVSVSAFKQVF 2206
            EAE +S+I+LLMV  N+DFL G+ +ES++S  F ++ M   +QKSA+LSQ S +AFK VF
Sbjct: 633  EAERLSYIQLLMVKYNKDFLAGNLEESKNSMGFDLEFMSIMQQKSASLSQASATAFKHVF 692

Query: 2205 RDIQNLFYQYANEDNSFLAMLKAGSKKSNLTRAVQHGMCLGLQHSLVPLSFRIPRQLSCA 2026
            R+ QNL Y YA+ DNSFLAMLKAGSK  NL + VQH MCLGLQ SLVPLSFRIPRQLSC 
Sbjct: 693  RNTQNLVYNYASNDNSFLAMLKAGSK-GNLLKLVQHSMCLGLQQSLVPLSFRIPRQLSCD 751

Query: 2025 AWNSQKTLDSLNIAHDHPEYTKSYIPYAVVPSSFLTGLNPLECFVHSLTTRDSSFGGHAD 1846
             WNS +T      AH  PE    YIP AVV SSFL GLNPLECFVHSL +RDSSF GHAD
Sbjct: 752  GWNSHRTNLVFEKAHKVPECPGPYIPCAVVESSFLAGLNPLECFVHSLISRDSSFSGHAD 811

Query: 1845 ISGTLTRRLMFFMRDLCIRYDGTVRNAYGNQVVQFSYNSKASSPNNNPDGSLNDSAYAC- 1669
            +SGTL R+LMFFMRDL + YDGTVRNAYGNQ+VQFSYN           G   +S     
Sbjct: 812  VSGTLNRKLMFFMRDLYVGYDGTVRNAYGNQIVQFSYNEADQISCTTGTGETVESHNHAT 871

Query: 1668 -AMGGQPVGXXXXXXXXXXXXXALDQPISALEASPLLNLKEILECGGNKRNN--TISLFL 1498
             A+GG PVG             ALDQP+SALE+SPLLNLK+ILE G   R+   T SLFL
Sbjct: 872  HAIGGHPVGSLAACAISEAAYSALDQPVSALESSPLLNLKKILESGVGSRSGEKTASLFL 931

Query: 1497 SKKLRRWAHGFEYGALEVKSHLERVQLLDIVSTVMIMFSPKT--SRHTLPWVCHFHISKD 1324
            S+ L RWAHGFEYGALEVK HLER+ L D+VSTVMI +SP+T  S H+ PWVC+FHI K+
Sbjct: 932  SESLERWAHGFEYGALEVKGHLERLLLSDVVSTVMICYSPETCKSPHS-PWVCYFHIDKE 990

Query: 1323 MVKRKQIIVQSIIDALCMK---CKSTQLKSKVYFPNLQITSKDCS--EGND--ATICITV 1165
             VK +++ ++S++DAL M+    K T+ K+    P+L+IT KDCS  EG +  + ICITV
Sbjct: 991  NVKTRRLKMRSVVDALNMRYRAAKPTKPKAGTDLPDLRITCKDCSVAEGGNKKSKICITV 1050

Query: 1164 SIVRSSKNSSIQLDTLKETVIPFLLGTVIKGSSNVKKVDILWKDPPNVSTSHKGSS--GE 991
            S V +SKNS    DTL++ VIPFLL TVIKG S  KKVDILW++ P+   S + S+  GE
Sbjct: 1051 SAVETSKNSLSLRDTLRDLVIPFLLRTVIKGFSAFKKVDILWRELPSPLKSSRSSTSPGE 1110

Query: 990  LYLRVFMSETCDRTRFWGVLMDDCLQLMDMIDWKRSHPEDIHAATLALGIDVARKLFLSK 811
            LYL+VFMSE+CDR +FW  L+D CLQ+ D+IDW+RS+P+D+H  T+A G+DVA + FL K
Sbjct: 1111 LYLQVFMSESCDRIKFWNALVDSCLQIRDLIDWERSYPDDVHDLTVAYGLDVAWESFLCK 1170

Query: 810  LESAISDTGKTILPEHLLLVSDCLSSTGEYVALSANGLARQRKQTSVSSPFTQACFSSPA 631
            L SA+S+TGK ILPEHL+LV+DCL++TGE+  LSA GL+ QRK   V SPF QACFS+P 
Sbjct: 1171 LHSAVSETGKKILPEHLVLVADCLTATGEFAPLSAKGLSMQRKAAGVVSPFMQACFSNPG 1230

Query: 630  DCFVNAAKMGIVDDLQGSLDALSWGNTPSLGTGGQFDILYSGKGHEPDKPENIYNLLGSH 451
            D FV AAKM + DDLQGSL++L+WG TPS+GTG  FD+++S KG++P KP ++Y  L SH
Sbjct: 1231 DSFVRAAKMRLSDDLQGSLESLAWGKTPSIGTGSSFDLMFSAKGYQPAKPMDVYARLSSH 1290

Query: 450  INGHEQNVKL-PDEGNSMSIKYLAKE-----------------GEILRKHFNANHFWWMS 325
            +   +  V + PD+   M  K LA+                     LR   + N    +S
Sbjct: 1291 VTADKPKVMVTPDDDIEMDGKSLARRLYKLDDLNKKSCKSQWAIAKLRSLLSFNDIKKLS 1350

Query: 324  KKLKDILRNYDINQQLSDLDEKMVTVALYFHPRSIEKIGSGPQEIKIGLSSKGGNSRCFQ 145
            + LK +L  Y I+ +LS+ D+ +V +AL FHPR  EKIG+G QEIKIG   +  +SRCF 
Sbjct: 1351 QSLKQMLSKYAIDGELSEADKSIVMMALQFHPRRNEKIGTGAQEIKIGYHKEYEDSRCFM 1410

Query: 144  LVRTDGSVEEFSYHKCIHHALELINPESAAEYQSLRSRWLN 22
            LVR DG+VE+FSY KC+ HALELI P+ A       S+WLN
Sbjct: 1411 LVRPDGTVEDFSYRKCMQHALELIAPQKAK-----TSKWLN 1446


>XP_016567789.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
            [Capsicum annuum] XP_016567795.1 PREDICTED: DNA-directed
            RNA polymerase IV subunit 1-like isoform X1 [Capsicum
            annuum]
          Length = 1450

 Score = 1546 bits (4002), Expect = 0.0
 Identities = 838/1481 (56%), Positives = 1043/1481 (70%), Gaps = 44/1481 (2%)
 Frame = -3

Query: 4332 VEQQVPLGFLTGMEFNIVTEEDAEKISVKEIGAANDVTHPMLGLPNPTSSQCLTCDAKDV 4153
            +EQQVP G L G+ F+I+TE DA K++ K IGA N+VT P LG PNP   QC TC A D 
Sbjct: 7    IEQQVPEGILKGINFSILTETDAVKLAAKVIGAVNEVTDPALGFPNPIF-QCSTCGASDG 65

Query: 4152 KTCEGHFGLIKFPFTILHPYFISDVAKVLNRICPGCKSVRR-RVKSASPTSTHHRPVPCK 3976
            K CEGHFGLIKFP+TIL+PYF+S+VA++L ++CPGCKS+RR +VK A  TS       CK
Sbjct: 66   KKCEGHFGLIKFPYTILNPYFVSEVAQILKKVCPGCKSLRRDKVKGADKTSA------CK 119

Query: 3975 YCDVHLKNKYPRMNFKVSTKEIFGRTAIFAQINERLW-----IKSLSLASDYWDFIPNDP 3811
            YCD      YP   FKVS K++FG+TAI A++NE        I  +SLASDYWDFIP+D 
Sbjct: 120  YCDQGTLG-YPPTKFKVSPKDMFGKTAIIAEVNENALKKQREITGVSLASDYWDFIPHDA 178

Query: 3810 QQEENSLQPN-KRVLSHLQVYHLLKDVDPRLLKDFVQDNKNSMFLSSFPVTPNSHRVNEF 3634
            QQ+ +    N KRVLSH QVY +LKDVDP  L+  ++  KNS+F+ +  +TPN HRV EF
Sbjct: 179  QQDASLSSSNYKRVLSHAQVYSILKDVDPGFLEGLLK-RKNSIFMQNCLLTPNCHRVTEF 237

Query: 3633 GQHMRFDERTRAYRKLVDFRGSANELSTRVLDCLKISKLRSEKSSSKAYAPKMFIQNEDA 3454
            GQHM FDE  R YRKL+DFRG+AN+LS  V D +K+SK+R+E+S          I N+ A
Sbjct: 238  GQHMIFDESNRLYRKLIDFRGTANDLSVCVFDRIKVSKIRAERS----------IINDPA 287

Query: 3453 APKMSGLKYIKELILGKRTDHAFRMVVVGDPNIKVDEIGVPRHIAEAMQVSERLNSRNWT 3274
            AP  +GLKY+KEL+L KRT+HAFRMVVVGDPNI++ EIG+P H+AE + ++E L+SRNW 
Sbjct: 288  APA-TGLKYVKELVLAKRTNHAFRMVVVGDPNIELGEIGIPCHVAENLHMAEPLSSRNWE 346

Query: 3273 TL----GVRILAKGRTFIRREGGLVRVTLQNDTLQVGDTIYRPLRDRDIVLINRPPSIHP 3106
             +     + IL KG   +RR+G L+RV++  D LQ GD I+RPL D D+VLINRPPSIH 
Sbjct: 347  KMTDLCDLMILQKGGILVRRKGVLIRVSVM-DQLQRGDVIHRPLVDGDVVLINRPPSIHQ 405

Query: 3105 HSLIALHVKILPINSVLSLNPLICSPFRGDFDGDCYHGYVPQSVDSRVELHELVALNKQL 2926
            HSLIAL V+ILP+NSVLS+NPL+CSPFRGDFDGD  HGYVPQS+DSR+EL ELVALN+QL
Sbjct: 406  HSLIALSVRILPVNSVLSINPLVCSPFRGDFDGDSLHGYVPQSIDSRIELSELVALNQQL 465

Query: 2925 INGQTGQNLLSLSHDSLTAAQLVIEDGVLLDRFQMQQLQMFCTCPQQLQFPAVVKVPSPN 2746
            I+GQ GQNLLSLSHDSLTAA L++E  V LDR QMQQLQMFC  P+Q+   A+++ PS  
Sbjct: 466  IDGQNGQNLLSLSHDSLTAANLILEPTVFLDRVQMQQLQMFC--PRQMGMNAIIRAPSGK 523

Query: 2745 NYSNATSSDSCLWTGKQLFSLLLPPDFHYDFPSTGVHVSKGEVISSTGASSWLCDTNENL 2566
            +Y          WTGKQLFSLLLP D  Y FPS GV +S+GE+++S+  SSWL D +ENL
Sbjct: 524  SY----------WTGKQLFSLLLPSDLEYVFPSNGVCISEGEILTSSSGSSWLRDASENL 573

Query: 2565 LYRLVKHCQEEFLDFLNAAQGVLCEWLSMRGXXXXXXXXXXXXXXXSRKNMIDEVSCALR 2386
             Y LVKH   + LD L AAQ VL EWLSMRG               SR+NMIDEV   L+
Sbjct: 574  FYSLVKHHGGDTLDLLYAAQAVLGEWLSMRGLSVSLSDLYISSDLFSRENMIDEVISGLQ 633

Query: 2385 EAEHVSHIKLLMVDSNQDFLIGSFQESESSKDFGVDHMFYERQKSAALSQVSVSAFKQVF 2206
            EAE +S+I+LLMV  N+DFL G+ +ES++S  F ++ M   +QKSA+LSQ S +AFK VF
Sbjct: 634  EAERLSYIQLLMVKYNKDFLAGNLEESKNSMGFDLEFMSIMQQKSASLSQASATAFKHVF 693

Query: 2205 RDIQNLFYQYANEDNSFLAMLKAGSKKSNLTRAVQHGMCLGLQHSLVPLSFRIPRQLSCA 2026
            R+ QNL Y YA+ DNSFLAMLKAGSK  NL + VQH MCLGLQ SLVPLSFRIPRQLSC 
Sbjct: 694  RNTQNLVYNYASNDNSFLAMLKAGSK-GNLLKLVQHSMCLGLQQSLVPLSFRIPRQLSCD 752

Query: 2025 AWNSQKTLDSLNIAHDHPEYTKSYIPYAVVPSSFLTGLNPLECFVHSLTTRDSSFGGHAD 1846
             WNS +T      AH  PE    YIP AVV SSFL GLNPLECFVHSL +RDSSF GHAD
Sbjct: 753  GWNSHRTNLVFEKAHKVPECPGPYIPCAVVESSFLAGLNPLECFVHSLISRDSSFSGHAD 812

Query: 1845 ISGTLTRRLMFFMRDLCIRYDGTVRNAYGNQVVQFSYNSKASSPNNNPDGSLNDSAYAC- 1669
            +SGTL R+LMFFMRDL + YDGTVRNAYGNQ+VQFSYN           G   +S     
Sbjct: 813  VSGTLNRKLMFFMRDLYVGYDGTVRNAYGNQIVQFSYNEADQISCTTGTGETVESHNHAT 872

Query: 1668 -AMGGQPVGXXXXXXXXXXXXXALDQPISALEASPLLNLKEILECGGNKRNN--TISLFL 1498
             A+GG PVG             ALDQP+SALE+SPLLNLK+ILE G   R+   T SLFL
Sbjct: 873  HAIGGHPVGSLAACAISEAAYSALDQPVSALESSPLLNLKKILESGVGSRSGEKTASLFL 932

Query: 1497 SKKLRRWAHGFEYGALEVKSHLERVQLLDIVSTVMIMFSPKT--SRHTLPWVCHFHISKD 1324
            S+ L RWAHGFEYGALEVK HLER+ L D+VSTVMI +SP+T  S H+ PWVC+FHI K+
Sbjct: 933  SESLERWAHGFEYGALEVKGHLERLLLSDVVSTVMICYSPETCKSPHS-PWVCYFHIDKE 991

Query: 1323 MVKRKQIIVQSIIDALCMK---CKSTQLKSKVYFPNLQITSKDCS--EGND--ATICITV 1165
             VK +++ ++S++DAL M+    K T+ K+    P+L+IT KDCS  EG +  + ICITV
Sbjct: 992  NVKTRRLKMRSVVDALNMRYRAAKPTKPKAGTDLPDLRITCKDCSVAEGGNKKSKICITV 1051

Query: 1164 SIVRSSKNSSIQLDTLKETVIPFLLGTVIKGSSNVKKVDILWKDPPNVSTSHKGSS--GE 991
            S V +SKNS    DTL++ VIPFLL TVIKG S  KKVDILW++ P+   S + S+  GE
Sbjct: 1052 SAVETSKNSLSLRDTLRDLVIPFLLRTVIKGFSAFKKVDILWRELPSPLKSSRSSTSPGE 1111

Query: 990  LYLRVFMSETCDRTRFWGVLMDDCLQLMDMIDWKRSHPEDIHAATLALGIDVARKLFLSK 811
            LYL+VFMSE+CDR +FW  L+D CLQ+ D+IDW+RS+P+D+H  T+A G+DVA + FL K
Sbjct: 1112 LYLQVFMSESCDRIKFWNALVDSCLQIRDLIDWERSYPDDVHDLTVAYGLDVAWESFLCK 1171

Query: 810  LESAISDTGKTILPEHLLLVSDCLSSTGEYVALSANGLARQRKQTSVSSPFTQACFSSPA 631
            L SA+S+TGK ILPEHL+LV+DCL++TGE+  LSA GL+ QRK   V SPF QACFS+P 
Sbjct: 1172 LHSAVSETGKKILPEHLVLVADCLTATGEFAPLSAKGLSMQRKAAGVVSPFMQACFSNPG 1231

Query: 630  DCFVNAAKMGIVDDLQGSLDALSWGNTPSLGTGGQFDILYSGKGHEPDKPENIYNLLGSH 451
            D FV AAKM + DDLQGSL++L+WG TPS+GTG  FD+++S KG++P KP ++Y  L SH
Sbjct: 1232 DSFVRAAKMRLSDDLQGSLESLAWGKTPSIGTGSSFDLMFSAKGYQPAKPMDVYARLSSH 1291

Query: 450  INGHEQNVKL-PDEGNSMSIKYLAKE-----------------GEILRKHFNANHFWWMS 325
            +   +  V + PD+   M  K LA+                     LR   + N    +S
Sbjct: 1292 VTADKPKVMVTPDDDIEMDGKSLARRLYKLDDLNKKSCKSQWAIAKLRSLLSFNDIKKLS 1351

Query: 324  KKLKDILRNYDINQQLSDLDEKMVTVALYFHPRSIEKIGSGPQEIKIGLSSKGGNSRCFQ 145
            + LK +L  Y I+ +LS+ D+ +V +AL FHPR  EKIG+G QEIKIG   +  +SRCF 
Sbjct: 1352 QSLKQMLSKYAIDGELSEADKSIVMMALQFHPRRNEKIGTGAQEIKIGYHKEYEDSRCFM 1411

Query: 144  LVRTDGSVEEFSYHKCIHHALELINPESAAEYQSLRSRWLN 22
            LVR DG+VE+FSY KC+ HALELI P+ A       S+WLN
Sbjct: 1412 LVRPDGTVEDFSYRKCMQHALELIAPQKAK-----TSKWLN 1447