BLASTX nr result
ID: Panax25_contig00025706
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax25_contig00025706
(422 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_017229404.1 PREDICTED: SWI/SNF complex subunit SWI3C [Daucus ... 77 9e-14
XP_015079362.1 PREDICTED: SWI/SNF complex subunit SWI3C isoform ... 66 7e-10
XP_004242041.1 PREDICTED: SWI/SNF complex subunit SWI3C [Solanum... 66 7e-10
XP_015079361.1 PREDICTED: SWI/SNF complex subunit SWI3C isoform ... 66 7e-10
XP_009803801.1 PREDICTED: SWI/SNF complex subunit SWI3C [Nicotia... 65 1e-09
XP_009596722.1 PREDICTED: SWI/SNF complex subunit SWI3C [Nicotia... 65 2e-09
CAN83645.1 hypothetical protein VITISV_016194 [Vitis vinifera] 64 2e-09
CBI18988.3 unnamed protein product, partial [Vitis vinifera] 64 3e-09
XP_011074832.1 PREDICTED: SWI/SNF complex subunit SWI3C [Sesamum... 64 3e-09
XP_010664183.1 PREDICTED: SWI/SNF complex subunit SWI3C isoform ... 64 3e-09
XP_010664182.1 PREDICTED: SWI/SNF complex subunit SWI3C isoform ... 64 3e-09
XP_006365536.1 PREDICTED: SWI/SNF complex subunit SWI3C [Solanum... 64 4e-09
OIT28631.1 swisnf complex subunit swi3c [Nicotiana attenuata] 64 5e-09
XP_019231580.1 PREDICTED: SWI/SNF complex subunit SWI3C [Nicotia... 64 5e-09
XP_012078282.1 PREDICTED: SWI/SNF complex subunit SWI3C isoform ... 63 6e-09
XP_012078281.1 PREDICTED: SWI/SNF complex subunit SWI3C isoform ... 63 6e-09
XP_012078280.1 PREDICTED: SWI/SNF complex subunit SWI3C isoform ... 63 6e-09
CDP10951.1 unnamed protein product [Coffea canephora] 63 9e-09
XP_016491187.1 PREDICTED: SWI/SNF complex subunit SWI3C-like [Ni... 62 1e-08
OAY58308.1 hypothetical protein MANES_02G166500 [Manihot esculenta] 60 6e-08
>XP_017229404.1 PREDICTED: SWI/SNF complex subunit SWI3C [Daucus carota subsp.
sativus] KZN10909.1 hypothetical protein DCAR_003565
[Daucus carota subsp. sativus]
Length = 733
Score = 77.0 bits (188), Expect = 9e-14
Identities = 43/86 (50%), Positives = 52/86 (60%), Gaps = 2/86 (2%)
Frame = +1
Query: 1 PVMVQNNAGNTRQQVVP--PSQPFISGYGNNQPIHPHVSPMQQQPTFXXXXXXXXXXXXX 174
P M+QNNAGNTRQQ+V PSQP++ GY N++P+HPHVSPM QQ T+
Sbjct: 651 PAMIQNNAGNTRQQIVSDGPSQPYM-GYTNSRPVHPHVSPMSQQQTYGLGPRMPLSAINP 709
Query: 175 XXXXXXXVNTPRAMLRSVSGTRSGLD 252
+T R M R VSG RSGLD
Sbjct: 710 SSASPN--STTRPMSRPVSGARSGLD 733
>XP_015079362.1 PREDICTED: SWI/SNF complex subunit SWI3C isoform X2 [Solanum
pennellii]
Length = 791
Score = 65.9 bits (159), Expect = 7e-10
Identities = 39/89 (43%), Positives = 47/89 (52%), Gaps = 9/89 (10%)
Frame = +1
Query: 10 VQNNAGNTRQQVV-PPSQPFISGYGNNQPIHPHVSPMQQQPTFXXXXXXXXXXXXXXXXX 186
V NN GN+RQQV PP Q FI+GYGNNQP+HP +S MQQQ +
Sbjct: 702 VVNNTGNSRQQVSGPPQQNFIAGYGNNQPMHPQMSFMQQQGIYGFGPRLPLSAIHPSSST 761
Query: 187 XXXVNTP--------RAMLRSVSGTRSGL 249
N P +MLR VSGT++GL
Sbjct: 762 PSMFNAPASSQPALSHSMLRPVSGTKTGL 790
>XP_004242041.1 PREDICTED: SWI/SNF complex subunit SWI3C [Solanum lycopersicum]
Length = 791
Score = 65.9 bits (159), Expect = 7e-10
Identities = 39/89 (43%), Positives = 47/89 (52%), Gaps = 9/89 (10%)
Frame = +1
Query: 10 VQNNAGNTRQQVV-PPSQPFISGYGNNQPIHPHVSPMQQQPTFXXXXXXXXXXXXXXXXX 186
V NN GN+RQQV PP Q FI+GYGNNQP+HP +S MQQQ +
Sbjct: 702 VVNNTGNSRQQVSGPPQQNFIAGYGNNQPMHPQMSFMQQQGIYGFGPRLPLSAIHPSSST 761
Query: 187 XXXVNTP--------RAMLRSVSGTRSGL 249
N P +MLR VSGT++GL
Sbjct: 762 PSMFNAPASSQPALSHSMLRPVSGTKTGL 790
>XP_015079361.1 PREDICTED: SWI/SNF complex subunit SWI3C isoform X1 [Solanum
pennellii]
Length = 798
Score = 65.9 bits (159), Expect = 7e-10
Identities = 39/89 (43%), Positives = 47/89 (52%), Gaps = 9/89 (10%)
Frame = +1
Query: 10 VQNNAGNTRQQVV-PPSQPFISGYGNNQPIHPHVSPMQQQPTFXXXXXXXXXXXXXXXXX 186
V NN GN+RQQV PP Q FI+GYGNNQP+HP +S MQQQ +
Sbjct: 709 VVNNTGNSRQQVSGPPQQNFIAGYGNNQPMHPQMSFMQQQGIYGFGPRLPLSAIHPSSST 768
Query: 187 XXXVNTP--------RAMLRSVSGTRSGL 249
N P +MLR VSGT++GL
Sbjct: 769 PSMFNAPASSQPALSHSMLRPVSGTKTGL 797
>XP_009803801.1 PREDICTED: SWI/SNF complex subunit SWI3C [Nicotiana sylvestris]
Length = 790
Score = 65.5 bits (158), Expect = 1e-09
Identities = 40/90 (44%), Positives = 46/90 (51%), Gaps = 10/90 (11%)
Frame = +1
Query: 10 VQNNAGNTRQQVV--PPSQPFISGYGNNQPIHPHVSPMQQQPTFXXXXXXXXXXXXXXXX 183
V +N GNTRQQV P Q FISGYGNNQP+HPH+S M QQ +
Sbjct: 700 VVSNTGNTRQQVASGPLQQSFISGYGNNQPMHPHMSFMPQQGMYGFGPRLPLSAIHPSSS 759
Query: 184 XXXXVNTP--------RAMLRSVSGTRSGL 249
N P +MLR VSGT+SGL
Sbjct: 760 TPGMFNAPASSQPALSHSMLRPVSGTKSGL 789
>XP_009596722.1 PREDICTED: SWI/SNF complex subunit SWI3C [Nicotiana
tomentosiformis]
Length = 790
Score = 64.7 bits (156), Expect = 2e-09
Identities = 40/90 (44%), Positives = 48/90 (53%), Gaps = 10/90 (11%)
Frame = +1
Query: 10 VQNNAGNTRQQVV--PPSQPFISGYGNNQPIHPHVSPMQQQPTFXXXXXXXXXXXXXXXX 183
V +N GN+RQQVV P Q FISGYGNNQP+HP++S MQQQ +
Sbjct: 700 VVSNIGNSRQQVVSGPLQQSFISGYGNNQPMHPNMSFMQQQGMYGFGPRLPLSAIHPSSS 759
Query: 184 XXXXVNTP--------RAMLRSVSGTRSGL 249
N P +MLR VSGT+SGL
Sbjct: 760 TPGMFNAPASSQPALSHSMLRPVSGTKSGL 789
>CAN83645.1 hypothetical protein VITISV_016194 [Vitis vinifera]
Length = 334
Score = 64.3 bits (155), Expect = 2e-09
Identities = 29/47 (61%), Positives = 35/47 (74%), Gaps = 2/47 (4%)
Frame = +1
Query: 1 PVMVQNNAGNTRQQVVP--PSQPFISGYGNNQPIHPHVSPMQQQPTF 135
P +V NN GN RQQ++ PSQP ISGYGNNQ +HPH+S M +QP F
Sbjct: 238 PALVSNNTGNNRQQIISASPSQPSISGYGNNQQMHPHMSFMPRQPMF 284
>CBI18988.3 unnamed protein product, partial [Vitis vinifera]
Length = 675
Score = 64.3 bits (155), Expect = 3e-09
Identities = 29/47 (61%), Positives = 35/47 (74%), Gaps = 2/47 (4%)
Frame = +1
Query: 1 PVMVQNNAGNTRQQVVP--PSQPFISGYGNNQPIHPHVSPMQQQPTF 135
P +V NN GN RQQ++ PSQP ISGYGNNQ +HPH+S M +QP F
Sbjct: 579 PALVSNNTGNNRQQIISASPSQPSISGYGNNQQMHPHMSFMPRQPMF 625
>XP_011074832.1 PREDICTED: SWI/SNF complex subunit SWI3C [Sesamum indicum]
Length = 771
Score = 64.3 bits (155), Expect = 3e-09
Identities = 37/90 (41%), Positives = 46/90 (51%), Gaps = 9/90 (10%)
Frame = +1
Query: 7 MVQNNAGNTRQQVVPPSQPFISGYGNNQPIHPHVSPMQQQPTFXXXXXXXXXXXXXXXXX 186
+V N GN+RQQV Q F SGYGNNQP+HPH+S MQQQ +
Sbjct: 681 IVNNTPGNSRQQVSGSPQTFASGYGNNQPVHPHMSLMQQQGMYGLGPRLPLSAIHPSSSA 740
Query: 187 XXXVNTPRA---------MLRSVSGTRSGL 249
+ +P + MLR VSGT+SGL
Sbjct: 741 SNTMYSPTSNSQPSLGHPMLRPVSGTKSGL 770
>XP_010664183.1 PREDICTED: SWI/SNF complex subunit SWI3C isoform X2 [Vitis
vinifera]
Length = 779
Score = 64.3 bits (155), Expect = 3e-09
Identities = 29/47 (61%), Positives = 35/47 (74%), Gaps = 2/47 (4%)
Frame = +1
Query: 1 PVMVQNNAGNTRQQVVP--PSQPFISGYGNNQPIHPHVSPMQQQPTF 135
P +V NN GN RQQ++ PSQP ISGYGNNQ +HPH+S M +QP F
Sbjct: 683 PALVSNNTGNNRQQIISASPSQPSISGYGNNQQMHPHMSFMPRQPMF 729
>XP_010664182.1 PREDICTED: SWI/SNF complex subunit SWI3C isoform X1 [Vitis
vinifera]
Length = 794
Score = 64.3 bits (155), Expect = 3e-09
Identities = 29/47 (61%), Positives = 35/47 (74%), Gaps = 2/47 (4%)
Frame = +1
Query: 1 PVMVQNNAGNTRQQVVP--PSQPFISGYGNNQPIHPHVSPMQQQPTF 135
P +V NN GN RQQ++ PSQP ISGYGNNQ +HPH+S M +QP F
Sbjct: 698 PALVSNNTGNNRQQIISASPSQPSISGYGNNQQMHPHMSFMPRQPMF 744
>XP_006365536.1 PREDICTED: SWI/SNF complex subunit SWI3C [Solanum tuberosum]
Length = 790
Score = 63.9 bits (154), Expect = 4e-09
Identities = 38/89 (42%), Positives = 47/89 (52%), Gaps = 9/89 (10%)
Frame = +1
Query: 10 VQNNAGNTRQQVV-PPSQPFISGYGNNQPIHPHVSPMQQQPTFXXXXXXXXXXXXXXXXX 186
V +N GN+RQQV PP Q FI+GYGNNQP+HP +S MQQQ +
Sbjct: 701 VVSNTGNSRQQVSGPPQQNFIAGYGNNQPMHPQMSFMQQQGIYGFGPRLPLSAIHPSSST 760
Query: 187 XXXVNTP--------RAMLRSVSGTRSGL 249
N P +MLR VSGT++GL
Sbjct: 761 PGMFNAPASSQPALNHSMLRPVSGTKTGL 789
>OIT28631.1 swisnf complex subunit swi3c [Nicotiana attenuata]
Length = 576
Score = 63.5 bits (153), Expect = 5e-09
Identities = 39/90 (43%), Positives = 46/90 (51%), Gaps = 10/90 (11%)
Frame = +1
Query: 10 VQNNAGNTRQQVV--PPSQPFISGYGNNQPIHPHVSPMQQQPTFXXXXXXXXXXXXXXXX 183
V +N GN+RQQ V P Q FISGYGNNQP+HPH+S M QQ +
Sbjct: 486 VVSNTGNSRQQAVSGPLQQNFISGYGNNQPMHPHMSFMPQQGMYGFGPRLPLSAIHPSSS 545
Query: 184 XXXXVNTP--------RAMLRSVSGTRSGL 249
N P +MLR VSGT+SGL
Sbjct: 546 TPGMFNAPASSQPALSHSMLRPVSGTKSGL 575
>XP_019231580.1 PREDICTED: SWI/SNF complex subunit SWI3C [Nicotiana attenuata]
Length = 736
Score = 63.5 bits (153), Expect = 5e-09
Identities = 39/90 (43%), Positives = 46/90 (51%), Gaps = 10/90 (11%)
Frame = +1
Query: 10 VQNNAGNTRQQVV--PPSQPFISGYGNNQPIHPHVSPMQQQPTFXXXXXXXXXXXXXXXX 183
V +N GN+RQQ V P Q FISGYGNNQP+HPH+S M QQ +
Sbjct: 646 VVSNTGNSRQQAVSGPLQQNFISGYGNNQPMHPHMSFMPQQGMYGFGPRLPLSAIHPSSS 705
Query: 184 XXXXVNTP--------RAMLRSVSGTRSGL 249
N P +MLR VSGT+SGL
Sbjct: 706 TPGMFNAPASSQPALSHSMLRPVSGTKSGL 735
>XP_012078282.1 PREDICTED: SWI/SNF complex subunit SWI3C isoform X3 [Jatropha
curcas]
Length = 779
Score = 63.2 bits (152), Expect = 6e-09
Identities = 33/49 (67%), Positives = 36/49 (73%), Gaps = 4/49 (8%)
Frame = +1
Query: 1 PVMVQNNAGNTRQQVVPPS-QPFISGYGNNQPIHPHVSPM---QQQPTF 135
P MV NN + RQQV+PPS QP ISGYGNNQ +HPHVS M QQQP F
Sbjct: 683 PSMVNNNISSNRQQVMPPSSQPNISGYGNNQQVHPHVSFMQRGQQQPMF 731
>XP_012078281.1 PREDICTED: SWI/SNF complex subunit SWI3C isoform X2 [Jatropha
curcas]
Length = 782
Score = 63.2 bits (152), Expect = 6e-09
Identities = 33/49 (67%), Positives = 36/49 (73%), Gaps = 4/49 (8%)
Frame = +1
Query: 1 PVMVQNNAGNTRQQVVPPS-QPFISGYGNNQPIHPHVSPM---QQQPTF 135
P MV NN + RQQV+PPS QP ISGYGNNQ +HPHVS M QQQP F
Sbjct: 686 PSMVNNNISSNRQQVMPPSSQPNISGYGNNQQVHPHVSFMQRGQQQPMF 734
>XP_012078280.1 PREDICTED: SWI/SNF complex subunit SWI3C isoform X1 [Jatropha
curcas] KDP32833.1 hypothetical protein JCGZ_12125
[Jatropha curcas]
Length = 783
Score = 63.2 bits (152), Expect = 6e-09
Identities = 33/49 (67%), Positives = 36/49 (73%), Gaps = 4/49 (8%)
Frame = +1
Query: 1 PVMVQNNAGNTRQQVVPPS-QPFISGYGNNQPIHPHVSPM---QQQPTF 135
P MV NN + RQQV+PPS QP ISGYGNNQ +HPHVS M QQQP F
Sbjct: 687 PSMVNNNISSNRQQVMPPSSQPNISGYGNNQQVHPHVSFMQRGQQQPMF 735
>CDP10951.1 unnamed protein product [Coffea canephora]
Length = 791
Score = 62.8 bits (151), Expect = 9e-09
Identities = 39/91 (42%), Positives = 47/91 (51%), Gaps = 10/91 (10%)
Frame = +1
Query: 7 MVQNNAGNTRQQVVPPSQPFISGYGNNQPIHPHVSPM-QQQPTFXXXXXXXXXXXXXXXX 183
MV +N GN RQQV QPFISG+G+NQPIHPH+S M QQQ +
Sbjct: 700 MVNSNVGNNRQQVSNSPQPFISGFGSNQPIHPHMSLMSQQQSMYGIGPRLPLSAIQPSSS 759
Query: 184 XXXXVNTPRA---------MLRSVSGTRSGL 249
+ P A MLR VSG++SGL
Sbjct: 760 SPNVMFNPAATSQAALNHPMLRPVSGSKSGL 790
>XP_016491187.1 PREDICTED: SWI/SNF complex subunit SWI3C-like [Nicotiana tabacum]
Length = 790
Score = 62.4 bits (150), Expect = 1e-08
Identities = 39/90 (43%), Positives = 47/90 (52%), Gaps = 10/90 (11%)
Frame = +1
Query: 10 VQNNAGNTRQQVV--PPSQPFISGYGNNQPIHPHVSPMQQQPTFXXXXXXXXXXXXXXXX 183
V +N GN+RQQVV P Q FISGYGNNQP+HP++S M QQ +
Sbjct: 700 VVSNIGNSRQQVVSGPLQQSFISGYGNNQPMHPNMSFMPQQGMYGFGPRLPLSAIHPSSS 759
Query: 184 XXXXVNTP--------RAMLRSVSGTRSGL 249
N P +MLR VSGT+SGL
Sbjct: 760 TPGMFNAPASSQPALSHSMLRPVSGTKSGL 789
>OAY58308.1 hypothetical protein MANES_02G166500 [Manihot esculenta]
Length = 792
Score = 60.5 bits (145), Expect = 6e-08
Identities = 31/50 (62%), Positives = 36/50 (72%), Gaps = 5/50 (10%)
Frame = +1
Query: 1 PVMVQNNAGNTRQQVVPPS--QPFISGYGNNQPIHPHVSPMQQ---QPTF 135
P MV NN G +RQQV+P S QP ISGYGNNQ +HPH+S MQ+ QP F
Sbjct: 695 PAMVNNNIGTSRQQVMPTSSSQPTISGYGNNQQVHPHMSFMQRGQPQPMF 744