BLASTX nr result

ID: Panax25_contig00025159 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00025159
         (575 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017224569.1 PREDICTED: uncharacterized protein LOC108200820 i...   110   9e-25
XP_017224574.1 PREDICTED: uncharacterized protein LOC108200820 i...    96   1e-19
XP_017224581.1 PREDICTED: uncharacterized protein LOC108200820 i...    88   7e-17
XP_011082045.1 PREDICTED: golgin subfamily B member 1 isoform X1...    64   1e-08
XP_009630989.1 PREDICTED: golgin subfamily B member 1 isoform X1...    62   5e-08
XP_010648850.1 PREDICTED: GRIP and coiled-coil domain-containing...    60   2e-07
XP_009783223.1 PREDICTED: GRIP and coiled-coil domain-containing...    59   6e-07
XP_019236501.1 PREDICTED: GRIP and coiled-coil domain-containing...    59   8e-07
XP_010648849.1 PREDICTED: GRIP and coiled-coil domain-containing...    57   3e-06
XP_018845623.1 PREDICTED: centrosomal protein of 290 kDa isoform...    57   5e-06

>XP_017224569.1 PREDICTED: uncharacterized protein LOC108200820 isoform X1 [Daucus
           carota subsp. sativus] KZN08019.1 hypothetical protein
           DCAR_000688 [Daucus carota subsp. sativus]
          Length = 2730

 Score =  110 bits (276), Expect = 9e-25
 Identities = 76/186 (40%), Positives = 104/186 (55%), Gaps = 8/186 (4%)
 Frame = -2

Query: 568 TSDSFLVPVLAESGIAQTTLPVAVEFPSEVAGIDEVGLSSSVGNEQDVYSSVQNNSGSIC 389
           +S S  VP+++E+G  + +L   V+   + A  DE G  S+V NE+   SSVQN + +  
Sbjct: 114 SSGSIPVPIVSETGEVKASLTGVVKLQLDGAEADEGGQRSNVCNEKGGDSSVQNKAENSA 173

Query: 388 AGDTDAANESSSEKWEMVDSEGKFPHVSEPSPFDLSAPPDLV----AVDDAIEVERAHGA 221
             D D  N+SS E  EM  SE K  HVS  +  D  AP DL+      DDAIEV+  HG 
Sbjct: 174 DIDIDTVNKSSLEILEMASSEKKPHHVSVSTSVDSFAPSDLIDDSGKGDDAIEVKPIHGV 233

Query: 220 DQVPDIGAMQEAECSDSKQIDRSSMMDSEVDKGLAISGLDESA----ETDVSAASVGMDM 53
           DQVPD+GAMQEAE + S+  DRS  ++ + D    I+G D S+    ETD+S +      
Sbjct: 234 DQVPDVGAMQEAEHASSENTDRSRAVEFQGDVTADIAGPDVSSYLHNETDISGS------ 287

Query: 52  DGTFFE 35
           D +F E
Sbjct: 288 DSSFIE 293


>XP_017224574.1 PREDICTED: uncharacterized protein LOC108200820 isoform X2 [Daucus
           carota subsp. sativus]
          Length = 2725

 Score = 95.9 bits (237), Expect = 1e-19
 Identities = 72/186 (38%), Positives = 99/186 (53%), Gaps = 8/186 (4%)
 Frame = -2

Query: 568 TSDSFLVPVLAESGIAQTTLPVAVEFPSEVAGIDEVGLSSSVGNEQDVYSSVQNNSGSIC 389
           +S S  VP+++E+G  + +L   V+   + A  DE G  S+V NE+   SSVQN + +  
Sbjct: 114 SSGSIPVPIVSETGEVKASLTGVVKLQLDGAEADEGGQRSNVCNEKGGDSSVQNKAENSA 173

Query: 388 AGDTDAANESSSEKWEMVDSEGKFPHVSEPSPFDLSAPPDLV----AVDDAIEVERAHGA 221
             D D  N+SS E  EM  SE K  HVS  +  D  AP DL+      DDAIEV+  HG 
Sbjct: 174 DIDIDTVNKSSLEILEMASSEKKPHHVSVSTSVDSFAPSDLIDDSGKGDDAIEVKPIHGV 233

Query: 220 DQVPDIGAMQEAECSDSKQIDRSSMMDSEVDKGLAISGLDESA----ETDVSAASVGMDM 53
           DQVPD     EAE + S+  DRS  ++ + D    I+G D S+    ETD+S +      
Sbjct: 234 DQVPD-----EAEHASSENTDRSRAVEFQGDVTADIAGPDVSSYLHNETDISGS------ 282

Query: 52  DGTFFE 35
           D +F E
Sbjct: 283 DSSFIE 288


>XP_017224581.1 PREDICTED: uncharacterized protein LOC108200820 isoform X3 [Daucus
           carota subsp. sativus]
          Length = 2722

 Score = 88.2 bits (217), Expect = 7e-17
 Identities = 69/186 (37%), Positives = 96/186 (51%), Gaps = 8/186 (4%)
 Frame = -2

Query: 568 TSDSFLVPVLAESGIAQTTLPVAVEFPSEVAGIDEVGLSSSVGNEQDVYSSVQNNSGSIC 389
           +S S  VP+++E+G  + +L   V+   + A  DE G  S+V NE+   SSVQN + +  
Sbjct: 114 SSGSIPVPIVSETGEVKASLTGVVKLQLDGAEADEGGQRSNVCNEKGGDSSVQNKAENSA 173

Query: 388 AGDTDAANESSSEKWEMVDSEGKFPHVSEPSPFDLSAPPDLV----AVDDAIEVERAHGA 221
             D D  N+SS E  EM  SE K  HVS  +  D  AP DL+      DDAIEV+  HG 
Sbjct: 174 DIDIDTVNKSSLEILEMASSEKKPHHVSVSTSVDSFAPSDLIDDSGKGDDAIEVKPIHGV 233

Query: 220 DQVPDIGAMQEAECSDSKQIDRSSMMDSEVDKGLAISGLDESA----ETDVSAASVGMDM 53
           D        QEAE + S+  DRS  ++ + D    I+G D S+    ETD+S +      
Sbjct: 234 D--------QEAEHASSENTDRSRAVEFQGDVTADIAGPDVSSYLHNETDISGS------ 279

Query: 52  DGTFFE 35
           D +F E
Sbjct: 280 DSSFIE 285


>XP_011082045.1 PREDICTED: golgin subfamily B member 1 isoform X1 [Sesamum indicum]
          Length = 2780

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 48/152 (31%), Positives = 73/152 (48%), Gaps = 3/152 (1%)
 Frame = -2

Query: 538 AESGIAQTTLPV-AVEFPSEVAGIDEVGLSSSVGNEQDVYSSV--QNNSGSICAGDTDAA 368
           A+SG+ +  L   AVEFP E +G+ E   + S  N  DV++ V  Q    S+   D    
Sbjct: 103 AKSGVLEVALVAGAVEFPLEGSGVGETRSNQSASNGPDVHTGVPEQGVLSSLVREDVKYD 162

Query: 367 NESSSEKWEMVDSEGKFPHVSEPSPFDLSAPPDLVAVDDAIEVERAHGADQVPDIGAMQE 188
              SS+   + +S             D SA    V +  + E+ER HG +QV D+GAMQE
Sbjct: 163 EPGSSDSMALRESA------------DSSAS---VPIYYSYELERQHGEEQVTDVGAMQE 207

Query: 187 AECSDSKQIDRSSMMDSEVDKGLAISGLDESA 92
              S   QID+  +   E+D  L+ + + E++
Sbjct: 208 VGSSSGDQIDKGMVTQLEIDGSLSSNDISETS 239


>XP_009630989.1 PREDICTED: golgin subfamily B member 1 isoform X1 [Nicotiana
           tomentosiformis]
          Length = 2665

 Score = 62.4 bits (150), Expect = 5e-08
 Identities = 62/189 (32%), Positives = 89/189 (47%), Gaps = 8/189 (4%)
 Frame = -2

Query: 547 PVLAESGIAQTTLPVAV--EFPSEVAGIDEVGLSSSVGNEQDVYSSVQN---NSGSICAG 383
           P L ES   +T   ++   +   E AG  E  L S  G+   V SS  +   N+  +   
Sbjct: 89  PPLDESLNVETVEMISASGKLVKEDAGEPEASLDSDSGDRDIVGSSSISEHANAKMVIED 148

Query: 382 DTDAANESSSEKWEMVDSEGKFPHVSEPSPFDLSAPPDLVAVDDAIEVERAHGADQVPDI 203
            TDA  E+   +    D   K      P  F   +  D  AV   +EVER H ++QV D+
Sbjct: 149 VTDAYLEAP--RILASDVSAKSSTTDVPVDFSSYSSAD-EAVAHQVEVERPHVSEQVSDV 205

Query: 202 GAMQEAECSDSKQIDRSSMMDSEVDKGLAISGLDESAETDVSAASVGMDMDG---TFFEA 32
           G MQE+  S SKQ+D SS ++ E DK L    L+ES ET +S  +  +  +G   T  E 
Sbjct: 206 GTMQESHNSGSKQVDSSSEVEIEGDKKLP---LNESTETSISQTATLVGDEGNEETKAEY 262

Query: 31  MHTSRPHDV 5
           +  S P++V
Sbjct: 263 IQVSEPNNV 271


>XP_010648850.1 PREDICTED: GRIP and coiled-coil domain-containing protein 2 isoform
           X4 [Vitis vinifera]
          Length = 2856

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 59/175 (33%), Positives = 77/175 (44%), Gaps = 20/175 (11%)
 Frame = -2

Query: 466 EVGLSSSVGNEQDVYSSVQNNSGSICAGDTDAANESSSEKWEMVDSEGKFPHVSEPSPFD 287
           E+ L  S   E DV SSV N   SI   + + A   S    EM  S G+  H +   P D
Sbjct: 126 ELPLEGSGVGENDVDSSVSNKGESIPIANPEVAIVGSLGDSEMAVSGGESIHANMREPVD 185

Query: 286 LSAPPDLVAVDDA--------------IEVER--AHGADQVPDIGAM----QEAECSDSK 167
           + APP   +VDDA              +E ER      ++ PD+  +    QEAE   SK
Sbjct: 186 VLAPP--ASVDDAREQLLDTVGTWSPRLEEERELLSSQEEFPDLSLIPRQYQEAESLGSK 243

Query: 166 QIDRSSMMDSEVDKGLAISGLDESAETDVSAASVGMDMDGTFFEAMHTSRPHDVS 2
           Q+DRSS ++ E    LA+S L  S ET    AS    M+    E   +    DVS
Sbjct: 244 QLDRSSEIEIEGGVKLALSELRGSVETLAREASEVTVMEEATHEEEQSGDADDVS 298


>XP_009783223.1 PREDICTED: GRIP and coiled-coil domain-containing protein 2 isoform
           X1 [Nicotiana sylvestris] XP_009783224.1 PREDICTED:
           nuclear-pore anchor isoform X1 [Nicotiana sylvestris]
          Length = 2665

 Score = 59.3 bits (142), Expect = 6e-07
 Identities = 56/167 (33%), Positives = 82/167 (49%), Gaps = 7/167 (4%)
 Frame = -2

Query: 484 EVAGIDEVGLSSSVGNEQDVYSSVQN---NSGSICAGDTDAANESSSEKWEMVDSEGKFP 314
           E AG  E  L+S  G+   V SS  +   N+  +    TDA  E+      ++ S+    
Sbjct: 112 EDAGEPEASLNSDSGDRDIVGSSSISEHANAKMVIEDVTDAYLEAP----RIIASDVSAK 167

Query: 313 HVSEPSPFDLSAPPDL-VAVDDAIEVERAHGADQVPDIGAMQEAECSDSKQIDRSSMMDS 137
             +   P D S+   +  AV   +EVER H  +QV D+G MQE+  S SKQ D SS ++ 
Sbjct: 168 SSATDVPVDFSSYSSVDEAVAHQVEVERPHVPEQVSDVGTMQESHNSGSKQGDSSSEVEI 227

Query: 136 EVDKGLAISGLDESAETDVSAASVGMDMDG---TFFEAMHTSRPHDV 5
           E DK L    L+ES ET +S  +  +  +G   T  E +  S P++V
Sbjct: 228 EGDKKLP---LNESTETSISQTATLVGDEGNEETKAEYIQLSEPNNV 271


>XP_019236501.1 PREDICTED: GRIP and coiled-coil domain-containing protein 2 isoform
           X1 [Nicotiana attenuata] XP_019236502.1 PREDICTED: GRIP
           and coiled-coil domain-containing protein 2 isoform X1
           [Nicotiana attenuata] OIT23084.1 putative web family
           protein, chloroplastic [Nicotiana attenuata]
          Length = 2665

 Score = 58.9 bits (141), Expect = 8e-07
 Identities = 56/167 (33%), Positives = 82/167 (49%), Gaps = 7/167 (4%)
 Frame = -2

Query: 484 EVAGIDEVGLSSSVGNEQDVYSSVQN---NSGSICAGDTDAANESSSEKWEMVDSEGKFP 314
           E AG  E  L+S  G+   V SS  +   N+  +    TDA  E+      ++ S+    
Sbjct: 112 EDAGEPEASLNSDSGDRDIVGSSSISEHANAKMLIEDVTDAYLEAP----RIIASDVSAK 167

Query: 313 HVSEPSPFDLSAPPDL-VAVDDAIEVERAHGADQVPDIGAMQEAECSDSKQIDRSSMMDS 137
             +   P D S+   +  AV   +EVER H  +QV D+G MQE+  S SKQ D SS ++ 
Sbjct: 168 SSATDVPVDFSSYSSVDEAVAHQVEVERPHVPEQVSDVGTMQESHNSGSKQGDSSSEVEI 227

Query: 136 EVDKGLAISGLDESAETDVSAASVGMDMDG---TFFEAMHTSRPHDV 5
           E DK L    L+ES ET +S  +  +  +G   T  E +  S P++V
Sbjct: 228 EGDKKLP---LNESTETSISQTATLVGDEGNEETKAEYIQLSEPNNV 271


>XP_010648849.1 PREDICTED: GRIP and coiled-coil domain-containing protein 2 isoform
           X3 [Vitis vinifera]
          Length = 2859

 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 58/178 (32%), Positives = 76/178 (42%), Gaps = 23/178 (12%)
 Frame = -2

Query: 466 EVGLSSSVGNEQDVYSSVQNNSGSICAGDTDAANESSSEKWEMVDSEGKFPHVSEPSPFD 287
           E+ L  S   E DV SSV N   SI   + + A   S    EM  S G+  H +   P D
Sbjct: 126 ELPLEGSGVGENDVDSSVSNKGESIPIANPEVAIVGSLGDSEMAVSGGESIHANMREPVD 185

Query: 286 LSAPPDLVAVDDA--------------IEVER--AHGADQVPDIGAM-------QEAECS 176
           + APP   +VDDA              +E ER      ++ PD+  +        EAE  
Sbjct: 186 VLAPP--ASVDDAREQLLDTVGTWSPRLEEERELLSSQEEFPDLSLIPRQYQVTDEAESL 243

Query: 175 DSKQIDRSSMMDSEVDKGLAISGLDESAETDVSAASVGMDMDGTFFEAMHTSRPHDVS 2
            SKQ+DRSS ++ E    LA+S L  S ET    AS    M+    E   +    DVS
Sbjct: 244 GSKQLDRSSEIEIEGGVKLALSELRGSVETLAREASEVTVMEEATHEEEQSGDADDVS 301


>XP_018845623.1 PREDICTED: centrosomal protein of 290 kDa isoform X1 [Juglans
           regia]
          Length = 2801

 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 35/73 (47%), Positives = 42/73 (57%)
 Frame = -2

Query: 220 DQVPDIGAMQEAECSDSKQIDRSSMMDSEVDKGLAISGLDESAETDVSAASVGMDMDGTF 41
           DQV DIGAMQEA+  DSKQ DRSS ++ E D+ L  S L ESAE   +  S+   +D   
Sbjct: 101 DQVTDIGAMQEADVLDSKQSDRSSEIELEGDQQLPFSELGESAEALSTIVSLKTYVDEVS 160

Query: 40  FEAMHTSRPHDVS 2
            E   T    DVS
Sbjct: 161 LEPEQTGESGDVS 173


Top