BLASTX nr result
ID: Panax25_contig00024402
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax25_contig00024402
(861 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KZM95102.1 hypothetical protein DCAR_018344 [Daucus carota subsp... 108 1e-22
XP_017253169.1 PREDICTED: homeobox protein LUMINIDEPENDENS isofo... 108 1e-22
XP_017253168.1 PREDICTED: homeobox protein LUMINIDEPENDENS isofo... 108 1e-22
XP_017253167.1 PREDICTED: homeobox protein LUMINIDEPENDENS isofo... 108 1e-22
XP_010652054.1 PREDICTED: homeobox protein LUMINIDEPENDENS [Viti... 88 7e-16
CBI32244.3 unnamed protein product, partial [Vitis vinifera] 88 7e-16
XP_002321023.1 LUMINIDEPENDENS family protein [Populus trichocar... 65 3e-08
OAY49562.1 hypothetical protein MANES_05G065900 [Manihot esculenta] 60 1e-06
>KZM95102.1 hypothetical protein DCAR_018344 [Daucus carota subsp. sativus]
Length = 944
Score = 108 bits (269), Expect = 1e-22
Identities = 88/262 (33%), Positives = 117/262 (44%), Gaps = 5/262 (1%)
Frame = +3
Query: 3 TVNGEVNHMPAVMAATVQSQNPSTSMVAPL--RQVIVPPPAQPITSQFVPSHHGATSTTL 176
TV GE +H+ AV+A TVQ ST V P R VI P PA+PI ++ P + ATS TL
Sbjct: 709 TVYGEESHISAVIA-TVQPHVYSTGTVLPYPQRPVIAPAPAEPIVTE-TPMYQRATSATL 766
Query: 177 PEKLALLEVPSLNQNAPEIFHRKNKFPAGNLPFLPNLSAAASPSMRVETLGNVNPAHFPV 356
PE+ A + VP LNQ A E +N F NL +L+A P+
Sbjct: 767 PER-ARVAVP-LNQTASETLQNQNNFTVSNLAQHNSLAA-------------------PL 805
Query: 357 TQQASYPLPARAQVRQHPSMIHEPRLSTPLWREKQDLXXXXXXXXXXXXXXXXXXXXLQA 536
P AR+Q+RQ + + + R ST WR++ +L QA
Sbjct: 806 QMPNLMPTSARSQMRQPSADVPDARFSTASWRDQPNLTPNSEFHTNYNNYNAYAGGTQQA 865
Query: 537 XXXXXXXXXXXXEMMVDPWYESWSPDNSPIRSQPG-WNYEEPRMNMG--XXXXXXXXXXX 707
E + D WY++WSPDNSP+RSQP W+Y + R G
Sbjct: 866 LIVPPSNRN---ETVGDTWYDTWSPDNSPVRSQPPVWSYGQARTTNGQNYRVDRSRPQLQ 922
Query: 708 XXXXXXXDLGGNENRRWRDQRR 773
D + +RRWRDQRR
Sbjct: 923 PRHPEFRDHARHGDRRWRDQRR 944
>XP_017253169.1 PREDICTED: homeobox protein LUMINIDEPENDENS isoform X3 [Daucus carota
subsp. sativus]
Length = 960
Score = 108 bits (269), Expect = 1e-22
Identities = 88/262 (33%), Positives = 117/262 (44%), Gaps = 5/262 (1%)
Frame = +3
Query: 3 TVNGEVNHMPAVMAATVQSQNPSTSMVAPL--RQVIVPPPAQPITSQFVPSHHGATSTTL 176
TV GE +H+ AV+A TVQ ST V P R VI P PA+PI ++ P + ATS TL
Sbjct: 725 TVYGEESHISAVIA-TVQPHVYSTGTVLPYPQRPVIAPAPAEPIVTE-TPMYQRATSATL 782
Query: 177 PEKLALLEVPSLNQNAPEIFHRKNKFPAGNLPFLPNLSAAASPSMRVETLGNVNPAHFPV 356
PE+ A + VP LNQ A E +N F NL +L+A P+
Sbjct: 783 PER-ARVAVP-LNQTASETLQNQNNFTVSNLAQHNSLAA-------------------PL 821
Query: 357 TQQASYPLPARAQVRQHPSMIHEPRLSTPLWREKQDLXXXXXXXXXXXXXXXXXXXXLQA 536
P AR+Q+RQ + + + R ST WR++ +L QA
Sbjct: 822 QMPNLMPTSARSQMRQPSADVPDARFSTASWRDQPNLTPNSEFHTNYNNYNAYAGGTQQA 881
Query: 537 XXXXXXXXXXXXEMMVDPWYESWSPDNSPIRSQPG-WNYEEPRMNMG--XXXXXXXXXXX 707
E + D WY++WSPDNSP+RSQP W+Y + R G
Sbjct: 882 LIVPPSNRN---ETVGDTWYDTWSPDNSPVRSQPPVWSYGQARTTNGQNYRVDRSRPQLQ 938
Query: 708 XXXXXXXDLGGNENRRWRDQRR 773
D + +RRWRDQRR
Sbjct: 939 PRHPEFRDHARHGDRRWRDQRR 960
>XP_017253168.1 PREDICTED: homeobox protein LUMINIDEPENDENS isoform X2 [Daucus carota
subsp. sativus]
Length = 960
Score = 108 bits (269), Expect = 1e-22
Identities = 88/262 (33%), Positives = 117/262 (44%), Gaps = 5/262 (1%)
Frame = +3
Query: 3 TVNGEVNHMPAVMAATVQSQNPSTSMVAPL--RQVIVPPPAQPITSQFVPSHHGATSTTL 176
TV GE +H+ AV+A TVQ ST V P R VI P PA+PI ++ P + ATS TL
Sbjct: 725 TVYGEESHISAVIA-TVQPHVYSTGTVLPYPQRPVIAPAPAEPIVTE-TPMYQRATSATL 782
Query: 177 PEKLALLEVPSLNQNAPEIFHRKNKFPAGNLPFLPNLSAAASPSMRVETLGNVNPAHFPV 356
PE+ A + VP LNQ A E +N F NL +L+A P+
Sbjct: 783 PER-ARVAVP-LNQTASETLQNQNNFTVSNLAQHNSLAA-------------------PL 821
Query: 357 TQQASYPLPARAQVRQHPSMIHEPRLSTPLWREKQDLXXXXXXXXXXXXXXXXXXXXLQA 536
P AR+Q+RQ + + + R ST WR++ +L QA
Sbjct: 822 QMPNLMPTSARSQMRQPSADVPDARFSTASWRDQPNLTPNSEFHTNYNNYNAYAGGTQQA 881
Query: 537 XXXXXXXXXXXXEMMVDPWYESWSPDNSPIRSQPG-WNYEEPRMNMG--XXXXXXXXXXX 707
E + D WY++WSPDNSP+RSQP W+Y + R G
Sbjct: 882 LIVPPSNRN---ETVGDTWYDTWSPDNSPVRSQPPVWSYGQARTTNGQNYRVDRSRPQLQ 938
Query: 708 XXXXXXXDLGGNENRRWRDQRR 773
D + +RRWRDQRR
Sbjct: 939 PRHPEFRDHARHGDRRWRDQRR 960
>XP_017253167.1 PREDICTED: homeobox protein LUMINIDEPENDENS isoform X1 [Daucus carota
subsp. sativus]
Length = 961
Score = 108 bits (269), Expect = 1e-22
Identities = 88/262 (33%), Positives = 117/262 (44%), Gaps = 5/262 (1%)
Frame = +3
Query: 3 TVNGEVNHMPAVMAATVQSQNPSTSMVAPL--RQVIVPPPAQPITSQFVPSHHGATSTTL 176
TV GE +H+ AV+A TVQ ST V P R VI P PA+PI ++ P + ATS TL
Sbjct: 726 TVYGEESHISAVIA-TVQPHVYSTGTVLPYPQRPVIAPAPAEPIVTE-TPMYQRATSATL 783
Query: 177 PEKLALLEVPSLNQNAPEIFHRKNKFPAGNLPFLPNLSAAASPSMRVETLGNVNPAHFPV 356
PE+ A + VP LNQ A E +N F NL +L+A P+
Sbjct: 784 PER-ARVAVP-LNQTASETLQNQNNFTVSNLAQHNSLAA-------------------PL 822
Query: 357 TQQASYPLPARAQVRQHPSMIHEPRLSTPLWREKQDLXXXXXXXXXXXXXXXXXXXXLQA 536
P AR+Q+RQ + + + R ST WR++ +L QA
Sbjct: 823 QMPNLMPTSARSQMRQPSADVPDARFSTASWRDQPNLTPNSEFHTNYNNYNAYAGGTQQA 882
Query: 537 XXXXXXXXXXXXEMMVDPWYESWSPDNSPIRSQPG-WNYEEPRMNMG--XXXXXXXXXXX 707
E + D WY++WSPDNSP+RSQP W+Y + R G
Sbjct: 883 LIVPPSNRN---ETVGDTWYDTWSPDNSPVRSQPPVWSYGQARTTNGQNYRVDRSRPQLQ 939
Query: 708 XXXXXXXDLGGNENRRWRDQRR 773
D + +RRWRDQRR
Sbjct: 940 PRHPEFRDHARHGDRRWRDQRR 961
>XP_010652054.1 PREDICTED: homeobox protein LUMINIDEPENDENS [Vitis vinifera]
Length = 1078
Score = 88.2 bits (217), Expect = 7e-16
Identities = 89/294 (30%), Positives = 115/294 (39%), Gaps = 54/294 (18%)
Frame = +3
Query: 54 QSQNPSTSMVAPLRQ-VIVPPPAQPIT----------SQFVPSHH-GATSTTLPEKLALL 197
Q Q P+T++V P + ++PPP QP S +PS T++ LPEK
Sbjct: 790 QRQLPATNLVLPPQTPAVIPPPQQPANFPPLSQQPPPSAMLPSFSLPQTTSVLPEKRLPS 849
Query: 198 EVPSLNQN-----------APEIFHRKNKFPAGNLPFLPNLSAAASPSMRVETLGNVNPA 344
VPSL+QN PEI N FPAG +P LP L AAA+PS+RVETL N P
Sbjct: 850 TVPSLHQNPPPNSSVLQSTTPEIVLNMNNFPAGGIP-LPRLLAAAAPSVRVETLSNHKPG 908
Query: 345 ----HFPVTQQASY------PLPARAQVRQHPSMIHEPRLSTPL---------------W 449
+ P SY P P R +Q PS + P PL W
Sbjct: 909 SVVMNAPERGPISYSVPQMLPRPTRPLTQQQPSSMLPPEPPHPLHHTMPMGNLGPVPDSW 968
Query: 450 REKQDLXXXXXXXXXXXXXXXXXXXXLQAXXXXXXXXXXXXEMMVDPWYESWSPDNSPIR 629
R +Q L E + + +E+WSP+ SP R
Sbjct: 969 RGRQGLASNPLNQNNYNLPVGGAL----QHPPLTAPSRERNEYVFEDDFETWSPEGSPSR 1024
Query: 630 SQP----GWNYEEPRMNMGXXXXXXXXXXXXXXXXXXDLGGNE--NRRWRDQRR 773
+ G N EPRM+ G N+ NRRWRD+RR
Sbjct: 1025 TPEYMLGGHNPLEPRMSSGRNYGPERLRHQHRNSSGYRDHNNKYGNRRWRDRRR 1078
>CBI32244.3 unnamed protein product, partial [Vitis vinifera]
Length = 1084
Score = 88.2 bits (217), Expect = 7e-16
Identities = 89/294 (30%), Positives = 115/294 (39%), Gaps = 54/294 (18%)
Frame = +3
Query: 54 QSQNPSTSMVAPLRQ-VIVPPPAQPIT----------SQFVPSHH-GATSTTLPEKLALL 197
Q Q P+T++V P + ++PPP QP S +PS T++ LPEK
Sbjct: 796 QRQLPATNLVLPPQTPAVIPPPQQPANFPPLSQQPPPSAMLPSFSLPQTTSVLPEKRLPS 855
Query: 198 EVPSLNQN-----------APEIFHRKNKFPAGNLPFLPNLSAAASPSMRVETLGNVNPA 344
VPSL+QN PEI N FPAG +P LP L AAA+PS+RVETL N P
Sbjct: 856 TVPSLHQNPPPNSSVLQSTTPEIVLNMNNFPAGGIP-LPRLLAAAAPSVRVETLSNHKPG 914
Query: 345 ----HFPVTQQASY------PLPARAQVRQHPSMIHEPRLSTPL---------------W 449
+ P SY P P R +Q PS + P PL W
Sbjct: 915 SVVMNAPERGPISYSVPQMLPRPTRPLTQQQPSSMLPPEPPHPLHHTMPMGNLGPVPDSW 974
Query: 450 REKQDLXXXXXXXXXXXXXXXXXXXXLQAXXXXXXXXXXXXEMMVDPWYESWSPDNSPIR 629
R +Q L E + + +E+WSP+ SP R
Sbjct: 975 RGRQGLASNPLNQNNYNLPVGGAL----QHPPLTAPSRERNEYVFEDDFETWSPEGSPSR 1030
Query: 630 SQP----GWNYEEPRMNMGXXXXXXXXXXXXXXXXXXDLGGNE--NRRWRDQRR 773
+ G N EPRM+ G N+ NRRWRD+RR
Sbjct: 1031 TPEYMLGGHNPLEPRMSSGRNYGPERLRHQHRNSSGYRDHNNKYGNRRWRDRRR 1084
>XP_002321023.1 LUMINIDEPENDENS family protein [Populus trichocarpa] EEE99338.1
LUMINIDEPENDENS family protein [Populus trichocarpa]
Length = 1136
Score = 65.5 bits (158), Expect = 3e-08
Identities = 77/273 (28%), Positives = 101/273 (36%), Gaps = 36/273 (13%)
Frame = +3
Query: 45 ATVQSQNPSTSMVAPLRQVIVPPPAQPITSQFVPSHHGATSTTLPEKLALLEVPSLNQNA 224
++VQ QN +T++ P +Q ++PI SQ P TS +PE V Q+
Sbjct: 869 SSVQRQNQATNIRTPQQQA-----SRPILSQHHPFSLSQTSIIVPENRQPPMVLQSQQSY 923
Query: 225 P-----------EIFHRKNKFPAGNLPFLPNLSAAASPSMRVETLGNVNPA--------- 344
P EI P N P LPN SAA PSM VET+ NV PA
Sbjct: 924 PTNSSMLHTPSSEIVFTMKNLPV-NTPSLPNPSAAIGPSMWVETMNNVKPAPSISLTSNP 982
Query: 345 --HFPVT-QQASYPLPARAQVRQH---PSMIHEPRLST----PL---WREKQDLXXXXXX 485
+PV +++ +PA Q++ H P +H T P+ WR +Q L
Sbjct: 983 PERWPVPFPRSTSAVPAPTQLQSHINEPPTVHSSWPHTGDVGPMRDSWRVRQSLVSNSPS 1042
Query: 486 XXXXXXXXXXXXXXLQAXXXXXXXXXXXXEMMVDPWYESWSPDNSPIRSQ---PGWNYEE 656
+Q E + D ESWSP+NS SQ G NY
Sbjct: 1043 HVNQNNYVPPYGGPVQPQLRSGPPRERN-EYLGDEGIESWSPENSRFESQEYMSGRNYSG 1101
Query: 657 PRMNMGXXXXXXXXXXXXXXXXXXDLGGNENRR 755
R N G D N NRR
Sbjct: 1102 ARTNSGWDYLPDNRSRQRNSSGYRDRNRNGNRR 1134
>OAY49562.1 hypothetical protein MANES_05G065900 [Manihot esculenta]
Length = 1055
Score = 60.5 bits (145), Expect = 1e-06
Identities = 75/274 (27%), Positives = 104/274 (37%), Gaps = 33/274 (12%)
Frame = +3
Query: 39 MAATVQSQNPSTSMVAPLRQVIVPPPAQPITSQFVP-SHHGATSTTLPEKLALLEVPSLN 215
+ VQ QN ++S P +Q + Q + P S TS+T + L +PS +
Sbjct: 784 LTGLVQPQNQASSTRMPQQQASLQMLPQQVQGAMPPFSWPQTTSSTSENRQPSLVLPS-H 842
Query: 216 QNAPE---IFHRKNK---FPAGNLPF----LPNLSAAASPSMRVETLGNVNPA------- 344
Q+ P + ++ NLPF L N SA A SMR+ET+ NV P
Sbjct: 843 QSFPSKSTVLQTQSSEMGLATKNLPFSSHSLNNFSATAGTSMRIETVNNVKPVPSVSFPM 902
Query: 345 HFPVTQQASYPLPARAQVRQHP-SMIHEPR---------LSTP-LWREKQDLXXXXXXXX 491
+ P +Q S+P+P P S++ EP +S P WR +Q L
Sbjct: 903 NAPDRRQDSFPMPIATPTPTRPHSLVSEPAVVQASTGNLVSVPDSWRARQRLASTSASQV 962
Query: 492 XXXXXXXXXXXXLQAXXXXXXXXXXXXEMMVDPWYESWSPDNSPIRS---QPGWNYE-EP 659
+Q E D +ESWSP+NSP RS G N+
Sbjct: 963 NQTNNDGMFRGSVQ-PQVRSGPPWERNEYKGDEGFESWSPENSPGRSPEYMQGRNHTGSG 1021
Query: 660 RMNMGXXXXXXXXXXXXXXXXXXDLGGNENRRWR 761
R+N G D N NRRWR
Sbjct: 1022 RINTGWKYTPDNGSRQQNHSGRWDHYRNGNRRWR 1055