BLASTX nr result
ID: Panax25_contig00023995
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax25_contig00023995
(1195 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KZM91448.1 hypothetical protein DCAR_021187 [Daucus carota subsp... 81 3e-13
XP_017258571.1 PREDICTED: zinc finger CCCH domain-containing pro... 81 5e-13
XP_017258570.1 PREDICTED: zinc finger CCCH domain-containing pro... 81 5e-13
XP_017258568.1 PREDICTED: zinc finger CCCH domain-containing pro... 81 5e-13
XP_017258569.1 PREDICTED: zinc finger CCCH domain-containing pro... 80 7e-13
XP_010267784.1 PREDICTED: zinc finger CCCH domain-containing pro... 72 6e-10
KVH96610.1 Zinc finger, CCCH-type [Cynara cardunculus var. scoly... 72 6e-10
XP_015572712.1 PREDICTED: zinc finger CCCH domain-containing pro... 64 5e-09
XP_002515733.1 PREDICTED: zinc finger CCCH domain-containing pro... 64 5e-09
XP_015572713.1 PREDICTED: zinc finger CCCH domain-containing pro... 64 5e-09
KDO59845.1 hypothetical protein CISIN_1g042473mg, partial [Citru... 66 3e-08
XP_006447503.1 hypothetical protein CICLE_v10015598mg [Citrus cl... 65 6e-08
XP_006469714.1 PREDICTED: zinc finger CCCH domain-containing pro... 65 7e-08
XP_006447506.1 hypothetical protein CICLE_v10015598mg [Citrus cl... 65 7e-08
XP_006447504.1 hypothetical protein CICLE_v10015598mg [Citrus cl... 65 7e-08
KVH95956.1 hypothetical protein Ccrd_001952 [Cynara cardunculus ... 62 4e-07
XP_012086378.1 PREDICTED: zinc finger CCCH domain-containing pro... 62 7e-07
JAT46315.1 Zinc finger CCCH domain-containing protein 13 [Anthur... 62 8e-07
XP_015061726.1 PREDICTED: zinc finger CCCH domain-containing pro... 49 3e-06
XP_004251510.1 PREDICTED: zinc finger CCCH domain-containing pro... 49 3e-06
>KZM91448.1 hypothetical protein DCAR_021187 [Daucus carota subsp. sativus]
Length = 346
Score = 80.9 bits (198), Expect = 3e-13
Identities = 42/85 (49%), Positives = 55/85 (64%)
Frame = +1
Query: 1 RSQARLHKLGNQLGSDAAKPGTNEEDASINLLKDGETIANHSMRPQPELHKIASPRKKRQ 180
RS+ARL KLG+QLGSD +PG EED IN++ DG+ IAN + PQ E+ +AS KKRQ
Sbjct: 114 RSEARLQKLGDQLGSDVVEPGPIEEDTRINIVSDGDPIANRVVSPQIEVQNLASSSKKRQ 173
Query: 181 RVQLAEEDEQLIHAIPAEGEGSMQE 255
R + E + QL A EGS ++
Sbjct: 174 RSLITEGEGQLKQAATVAEEGSKRK 198
>XP_017258571.1 PREDICTED: zinc finger CCCH domain-containing protein 13 isoform X4
[Daucus carota subsp. sativus]
Length = 444
Score = 80.9 bits (198), Expect = 5e-13
Identities = 42/85 (49%), Positives = 55/85 (64%)
Frame = +1
Query: 1 RSQARLHKLGNQLGSDAAKPGTNEEDASINLLKDGETIANHSMRPQPELHKIASPRKKRQ 180
RS+ARL KLG+QLGSD +PG EED IN++ DG+ IAN + PQ E+ +AS KKRQ
Sbjct: 212 RSEARLQKLGDQLGSDVVEPGPIEEDTRINIVSDGDPIANRVVSPQIEVQNLASSSKKRQ 271
Query: 181 RVQLAEEDEQLIHAIPAEGEGSMQE 255
R + E + QL A EGS ++
Sbjct: 272 RSLITEGEGQLKQAATVAEEGSKRK 296
>XP_017258570.1 PREDICTED: zinc finger CCCH domain-containing protein 13 isoform X3
[Daucus carota subsp. sativus]
Length = 444
Score = 80.9 bits (198), Expect = 5e-13
Identities = 42/85 (49%), Positives = 55/85 (64%)
Frame = +1
Query: 1 RSQARLHKLGNQLGSDAAKPGTNEEDASINLLKDGETIANHSMRPQPELHKIASPRKKRQ 180
RS+ARL KLG+QLGSD +PG EED IN++ DG+ IAN + PQ E+ +AS KKRQ
Sbjct: 214 RSEARLQKLGDQLGSDVVEPGPIEEDTRINIVSDGDPIANRVVSPQIEVQNLASSSKKRQ 273
Query: 181 RVQLAEEDEQLIHAIPAEGEGSMQE 255
R + E + QL A EGS ++
Sbjct: 274 RSLITEGEGQLKQAATVAEEGSKRK 298
>XP_017258568.1 PREDICTED: zinc finger CCCH domain-containing protein 13 isoform X1
[Daucus carota subsp. sativus]
Length = 446
Score = 80.9 bits (198), Expect = 5e-13
Identities = 42/85 (49%), Positives = 55/85 (64%)
Frame = +1
Query: 1 RSQARLHKLGNQLGSDAAKPGTNEEDASINLLKDGETIANHSMRPQPELHKIASPRKKRQ 180
RS+ARL KLG+QLGSD +PG EED IN++ DG+ IAN + PQ E+ +AS KKRQ
Sbjct: 214 RSEARLQKLGDQLGSDVVEPGPIEEDTRINIVSDGDPIANRVVSPQIEVQNLASSSKKRQ 273
Query: 181 RVQLAEEDEQLIHAIPAEGEGSMQE 255
R + E + QL A EGS ++
Sbjct: 274 RSLITEGEGQLKQAATVAEEGSKRK 298
>XP_017258569.1 PREDICTED: zinc finger CCCH domain-containing protein 13 isoform X2
[Daucus carota subsp. sativus]
Length = 445
Score = 80.5 bits (197), Expect = 7e-13
Identities = 44/85 (51%), Positives = 57/85 (67%)
Frame = +1
Query: 1 RSQARLHKLGNQLGSDAAKPGTNEEDASINLLKDGETIANHSMRPQPELHKIASPRKKRQ 180
RS+ARL KLG+QLGSD +PG EED IN++ DG+ IAN + PQ E+ +AS KKRQ
Sbjct: 214 RSEARLQKLGDQLGSDVVEPGPIEEDTRINIVSDGDPIANRVVSPQIEVQNLASSSKKRQ 273
Query: 181 RVQLAEEDEQLIHAIPAEGEGSMQE 255
R + E + QL A AE EGS ++
Sbjct: 274 RSLITEGEGQLKQATVAE-EGSKRK 297
>XP_010267784.1 PREDICTED: zinc finger CCCH domain-containing protein 13 [Nelumbo
nucifera]
Length = 464
Score = 71.6 bits (174), Expect = 6e-10
Identities = 36/70 (51%), Positives = 46/70 (65%)
Frame = +1
Query: 1 RSQARLHKLGNQLGSDAAKPGTNEEDASINLLKDGETIANHSMRPQPELHKIASPRKKRQ 180
RSQARL KLG LGSDA+ P NEED+SIN++ DGE + M P+ +L SP KKR+
Sbjct: 223 RSQARLQKLGELLGSDASGPAINEEDSSINIVSDGEPNDKNRMSPKNDLENQTSPTKKRR 282
Query: 181 RVQLAEEDEQ 210
R L +E+
Sbjct: 283 RFNLETSEEE 292
>KVH96610.1 Zinc finger, CCCH-type [Cynara cardunculus var. scolymus]
Length = 493
Score = 71.6 bits (174), Expect = 6e-10
Identities = 40/94 (42%), Positives = 55/94 (58%)
Frame = +1
Query: 4 SQARLHKLGNQLGSDAAKPGTNEEDASINLLKDGETIANHSMRPQPELHKIASPRKKRQR 183
S+ARL KLG LGSD + TNEED +IN+L + E + NH P+ + H ASP KKR R
Sbjct: 269 SEARLQKLGEHLGSDV-RTATNEEDVNINILSEEEMLGNHLTGPRIKQHNDASPSKKRLR 327
Query: 184 VQLAEEDEQLIHAIPAEGEGSMQETFIQRSFWIP 285
V+ E+ +Q + EG + + F + S W P
Sbjct: 328 VRAYEDLKQAENVTKGEGLSTGRARFEKHSRWDP 361
>XP_015572712.1 PREDICTED: zinc finger CCCH domain-containing protein 13 isoform X1
[Ricinus communis]
Length = 453
Score = 63.9 bits (154), Expect(2) = 5e-09
Identities = 36/108 (33%), Positives = 58/108 (53%)
Frame = +1
Query: 1 RSQARLHKLGNQLGSDAAKPGTNEEDASINLLKDGETIANHSMRPQPELHKIASPRKKRQ 180
RSQ RL KLG+QLGS G NEED+SIN++ DGE +H++ P+ E+ +SPR+
Sbjct: 218 RSQGRLQKLGDQLGSGIITTGGNEEDSSINIVSDGEAPGSHAISPRNEVQNNSSPRENIL 277
Query: 181 RVQLAEEDEQLIHAIPAEGEGSMQETFIQRSFWIPLCIMLLTITRKLI 324
+ +E +G + + +SF + LL I ++++
Sbjct: 278 HAKCDNAEESKKANSTNDGGYHTKTISLGKSFQLNANAALLNINKEVV 325
Score = 26.2 bits (56), Expect(2) = 5e-09
Identities = 20/52 (38%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +3
Query: 324 LKVSESGLLFSSTSMAAHXXXXXXXXXXXXXKFEVVGNSSARVEK-EVEYEV 476
LK SE G L STSMAA EVV +S ++ K YEV
Sbjct: 359 LKGSEIGRLAPSTSMAAFHAIDELVDVEVEESIEVVETASLQIHKGAAAYEV 410
>XP_002515733.1 PREDICTED: zinc finger CCCH domain-containing protein 13 isoform X2
[Ricinus communis] EEF46680.1 conserved hypothetical
protein [Ricinus communis]
Length = 448
Score = 63.9 bits (154), Expect(2) = 5e-09
Identities = 36/108 (33%), Positives = 58/108 (53%)
Frame = +1
Query: 1 RSQARLHKLGNQLGSDAAKPGTNEEDASINLLKDGETIANHSMRPQPELHKIASPRKKRQ 180
RSQ RL KLG+QLGS G NEED+SIN++ DGE +H++ P+ E+ +SPR+
Sbjct: 213 RSQGRLQKLGDQLGSGIITTGGNEEDSSINIVSDGEAPGSHAISPRNEVQNNSSPRENIL 272
Query: 181 RVQLAEEDEQLIHAIPAEGEGSMQETFIQRSFWIPLCIMLLTITRKLI 324
+ +E +G + + +SF + LL I ++++
Sbjct: 273 HAKCDNAEESKKANSTNDGGYHTKTISLGKSFQLNANAALLNINKEVV 320
Score = 26.2 bits (56), Expect(2) = 5e-09
Identities = 20/52 (38%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +3
Query: 324 LKVSESGLLFSSTSMAAHXXXXXXXXXXXXXKFEVVGNSSARVEK-EVEYEV 476
LK SE G L STSMAA EVV +S ++ K YEV
Sbjct: 354 LKGSEIGRLAPSTSMAAFHAIDELVDVEVEESIEVVETASLQIHKGAAAYEV 405
>XP_015572713.1 PREDICTED: zinc finger CCCH domain-containing protein 13 isoform X3
[Ricinus communis]
Length = 396
Score = 63.9 bits (154), Expect(2) = 5e-09
Identities = 36/108 (33%), Positives = 58/108 (53%)
Frame = +1
Query: 1 RSQARLHKLGNQLGSDAAKPGTNEEDASINLLKDGETIANHSMRPQPELHKIASPRKKRQ 180
RSQ RL KLG+QLGS G NEED+SIN++ DGE +H++ P+ E+ +SPR+
Sbjct: 161 RSQGRLQKLGDQLGSGIITTGGNEEDSSINIVSDGEAPGSHAISPRNEVQNNSSPRENIL 220
Query: 181 RVQLAEEDEQLIHAIPAEGEGSMQETFIQRSFWIPLCIMLLTITRKLI 324
+ +E +G + + +SF + LL I ++++
Sbjct: 221 HAKCDNAEESKKANSTNDGGYHTKTISLGKSFQLNANAALLNINKEVV 268
Score = 26.2 bits (56), Expect(2) = 5e-09
Identities = 20/52 (38%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +3
Query: 324 LKVSESGLLFSSTSMAAHXXXXXXXXXXXXXKFEVVGNSSARVEK-EVEYEV 476
LK SE G L STSMAA EVV +S ++ K YEV
Sbjct: 302 LKGSEIGRLAPSTSMAAFHAIDELVDVEVEESIEVVETASLQIHKGAAAYEV 353
>KDO59845.1 hypothetical protein CISIN_1g042473mg, partial [Citrus sinensis]
Length = 408
Score = 66.2 bits (160), Expect = 3e-08
Identities = 35/62 (56%), Positives = 40/62 (64%)
Frame = +1
Query: 1 RSQARLHKLGNQLGSDAAKPGTNEEDASINLLKDGETIANHSMRPQPELHKIASPRKKRQ 180
RSQARL KLG LG DA K G NEED+SIN++ D ET H + PQ E I SP KK+
Sbjct: 214 RSQARLQKLGYHLGLDATKVGGNEEDSSINIMSDEETTNYHLVDPQNEKQTIPSPNKKKL 273
Query: 181 RV 186
V
Sbjct: 274 HV 275
>XP_006447503.1 hypothetical protein CICLE_v10015598mg [Citrus clementina]
XP_006447505.1 hypothetical protein CICLE_v10015598mg
[Citrus clementina] XP_006447507.1 hypothetical protein
CICLE_v10015598mg [Citrus clementina] XP_006469715.1
PREDICTED: zinc finger CCCH domain-containing protein 13
isoform X3 [Citrus sinensis] ESR60743.1 hypothetical
protein CICLE_v10015598mg [Citrus clementina] ESR60745.1
hypothetical protein CICLE_v10015598mg [Citrus
clementina] ESR60747.1 hypothetical protein
CICLE_v10015598mg [Citrus clementina]
Length = 383
Score = 65.1 bits (157), Expect = 6e-08
Identities = 34/62 (54%), Positives = 40/62 (64%)
Frame = +1
Query: 1 RSQARLHKLGNQLGSDAAKPGTNEEDASINLLKDGETIANHSMRPQPELHKIASPRKKRQ 180
RSQARL KLG LG DA K G NEED+SIN++ D ET H + PQ + I SP KK+
Sbjct: 177 RSQARLQKLGYHLGLDATKVGGNEEDSSINIMSDEETTNYHLVDPQNDKQTIPSPNKKKL 236
Query: 181 RV 186
V
Sbjct: 237 HV 238
>XP_006469714.1 PREDICTED: zinc finger CCCH domain-containing protein 13 isoform X2
[Citrus sinensis]
Length = 409
Score = 65.1 bits (157), Expect = 7e-08
Identities = 34/62 (54%), Positives = 40/62 (64%)
Frame = +1
Query: 1 RSQARLHKLGNQLGSDAAKPGTNEEDASINLLKDGETIANHSMRPQPELHKIASPRKKRQ 180
RSQARL KLG LG DA K G NEED+SIN++ D ET H + PQ + I SP KK+
Sbjct: 214 RSQARLQKLGYHLGLDATKVGGNEEDSSINIMSDEETTNYHLVDPQNDKQTIPSPNKKKL 273
Query: 181 RV 186
V
Sbjct: 274 HV 275
>XP_006447506.1 hypothetical protein CICLE_v10015598mg [Citrus clementina]
XP_006469713.1 PREDICTED: zinc finger CCCH
domain-containing protein 13 isoform X1 [Citrus
sinensis] ESR60746.1 hypothetical protein
CICLE_v10015598mg [Citrus clementina]
Length = 420
Score = 65.1 bits (157), Expect = 7e-08
Identities = 34/62 (54%), Positives = 40/62 (64%)
Frame = +1
Query: 1 RSQARLHKLGNQLGSDAAKPGTNEEDASINLLKDGETIANHSMRPQPELHKIASPRKKRQ 180
RSQARL KLG LG DA K G NEED+SIN++ D ET H + PQ + I SP KK+
Sbjct: 214 RSQARLQKLGYHLGLDATKVGGNEEDSSINIMSDEETTNYHLVDPQNDKQTIPSPNKKKL 273
Query: 181 RV 186
V
Sbjct: 274 HV 275
>XP_006447504.1 hypothetical protein CICLE_v10015598mg [Citrus clementina]
XP_006447508.1 hypothetical protein CICLE_v10015598mg
[Citrus clementina] ESR60744.1 hypothetical protein
CICLE_v10015598mg [Citrus clementina] ESR60748.1
hypothetical protein CICLE_v10015598mg [Citrus
clementina]
Length = 433
Score = 65.1 bits (157), Expect = 7e-08
Identities = 34/62 (54%), Positives = 40/62 (64%)
Frame = +1
Query: 1 RSQARLHKLGNQLGSDAAKPGTNEEDASINLLKDGETIANHSMRPQPELHKIASPRKKRQ 180
RSQARL KLG LG DA K G NEED+SIN++ D ET H + PQ + I SP KK+
Sbjct: 214 RSQARLQKLGYHLGLDATKVGGNEEDSSINIMSDEETTNYHLVDPQNDKQTIPSPNKKKL 273
Query: 181 RV 186
V
Sbjct: 274 HV 275
>KVH95956.1 hypothetical protein Ccrd_001952 [Cynara cardunculus var. scolymus]
Length = 349
Score = 62.4 bits (150), Expect = 4e-07
Identities = 39/87 (44%), Positives = 49/87 (56%), Gaps = 18/87 (20%)
Frame = +1
Query: 4 SQARLHKLGNQLGSDAAKPGTNEEDASINLLKDGET------------------IANHSM 129
SQARL KLG+QLGSD A+ NEED SIN+L D +T + NH M
Sbjct: 99 SQARLQKLGDQLGSD-ARAAANEEDISINILSDEDTLGNMIPKNDKVSPRKDEMLGNHLM 157
Query: 130 RPQPELHKIASPRKKRQRVQLAEEDEQ 210
PQ + +K +SP KKR R + E DE+
Sbjct: 158 GPQKDQYK-SSPSKKRMRFHMVEADEK 183
>XP_012086378.1 PREDICTED: zinc finger CCCH domain-containing protein 13 [Jatropha
curcas] KDP25864.1 hypothetical protein JCGZ_22894
[Jatropha curcas]
Length = 449
Score = 62.0 bits (149), Expect = 7e-07
Identities = 32/63 (50%), Positives = 42/63 (66%)
Frame = +1
Query: 1 RSQARLHKLGNQLGSDAAKPGTNEEDASINLLKDGETIANHSMRPQPELHKIASPRKKRQ 180
RSQ RL KLG+QLGS +A G NE+D+SIN++ DGE H+ Q E+ +SP KK
Sbjct: 214 RSQVRLQKLGDQLGSGSATAGGNEDDSSINIVSDGEAPGYHATSLQNEVQNNSSPGKKGL 273
Query: 181 RVQ 189
RV+
Sbjct: 274 RVK 276
>JAT46315.1 Zinc finger CCCH domain-containing protein 13 [Anthurium amnicola]
Length = 389
Score = 61.6 bits (148), Expect = 8e-07
Identities = 28/69 (40%), Positives = 45/69 (65%)
Frame = +1
Query: 1 RSQARLHKLGNQLGSDAAKPGTNEEDASINLLKDGETIANHSMRPQPELHKIASPRKKRQ 180
RSQ RL +LG+Q G++ ++P N ED+SIN + DG + + P+ E+H SP K++Q
Sbjct: 220 RSQIRLQRLGDQFGTENSRPSNNGEDSSINAISDGGPNGDGCLSPRHEMHNHTSPIKRKQ 279
Query: 181 RVQLAEEDE 207
R++ A +E
Sbjct: 280 RLESAAAEE 288
>XP_015061726.1 PREDICTED: zinc finger CCCH domain-containing protein 13 isoform X1
[Solanum pennellii]
Length = 448
Score = 48.5 bits (114), Expect(2) = 3e-06
Identities = 35/88 (39%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Frame = +1
Query: 1 RSQARLHKLGNQLGSDAAKPGTNEEDASINLLKDGETIANHSMRPQPELHKIASPRKKRQ 180
RS+A+L KL +L SD + G +EED++IN + DG NH E K SP KKR
Sbjct: 248 RSEAQLQKLAYKLSSDFIRTGASEEDSAIN-ISDGGMAGNH-FSSLVEQQKNTSPTKKRP 305
Query: 181 RVQLAEEDEQLIHAIP-AEGEGSMQETF 261
RV E DE A+ A+G G+ + ++
Sbjct: 306 RVH-HEVDETSNQALTRAKGNGAQRISY 332
Score = 32.3 bits (72), Expect(2) = 3e-06
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = +3
Query: 327 KVSESGLLFSSTSMAAHXXXXXXXXXXXXXKFEVVGNSSARVEKEV 464
K SES ++ TSMAAH K EV GN++ R K V
Sbjct: 357 KASESAVVLPPTSMAAHAKDEDAEVGETEEKLEVAGNATRRAGKGV 402
>XP_004251510.1 PREDICTED: zinc finger CCCH domain-containing protein 13 isoform X1
[Solanum lycopersicum]
Length = 448
Score = 48.5 bits (114), Expect(2) = 3e-06
Identities = 34/88 (38%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Frame = +1
Query: 1 RSQARLHKLGNQLGSDAAKPGTNEEDASINLLKDGETIANHSMRPQPELHKIASPRKKRQ 180
RS+A+L KL +L SD + G +EED++IN + DG NH E K SP KKR
Sbjct: 248 RSEAQLQKLAYKLSSDFIRTGASEEDSAIN-ISDGGMAGNH-FSSLVEQQKNTSPTKKRP 305
Query: 181 RVQLAEEDEQLIHAIP-AEGEGSMQETF 261
R+ E DE A+ A+G G+ + ++
Sbjct: 306 RIH-HEADETSNQALTRAKGNGAQRISY 332
Score = 32.3 bits (72), Expect(2) = 3e-06
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = +3
Query: 327 KVSESGLLFSSTSMAAHXXXXXXXXXXXXXKFEVVGNSSARVEKEV 464
K SES ++ TSMAAH K EV GN++ R K V
Sbjct: 357 KASESAVVLPPTSMAAHAKDEDAEVGETEEKLEVAGNATRRAGKGV 402