BLASTX nr result

ID: Panax25_contig00023850 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00023850
         (363 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_015168018.1 PREDICTED: DNA repair helicase UVH6 isoform X2 [S...    55   3e-06
XP_015077445.1 PREDICTED: DNA repair helicase UVH6 [Solanum penn...    55   3e-06
XP_006355794.1 PREDICTED: DNA repair helicase UVH6 isoform X1 [S...    55   3e-06
XP_004240533.1 PREDICTED: DNA repair helicase XPD [Solanum lycop...    55   3e-06
KNA08988.1 hypothetical protein SOVF_157750, partial [Spinacia o...    54   8e-06
XP_002277634.1 PREDICTED: DNA repair helicase XPD [Vitis vinifera]     54   8e-06

>XP_015168018.1 PREDICTED: DNA repair helicase UVH6 isoform X2 [Solanum tuberosum]
          Length = 732

 Score = 54.7 bits (130), Expect = 3e-06
 Identities = 26/28 (92%), Positives = 26/28 (92%)
 Frame = +3

Query: 96  SVVSVENRDSVDAGCRKLTASWVRAFAV 179
           SVVS ENRDSVDAGCRKLTASWVRA AV
Sbjct: 120 SVVSAENRDSVDAGCRKLTASWVRAIAV 147


>XP_015077445.1 PREDICTED: DNA repair helicase UVH6 [Solanum pennellii]
          Length = 758

 Score = 54.7 bits (130), Expect = 3e-06
 Identities = 26/28 (92%), Positives = 26/28 (92%)
 Frame = +3

Query: 96  SVVSVENRDSVDAGCRKLTASWVRAFAV 179
           SVVS ENRDSVDAGCRKLTASWVRA AV
Sbjct: 120 SVVSAENRDSVDAGCRKLTASWVRAIAV 147


>XP_006355794.1 PREDICTED: DNA repair helicase UVH6 isoform X1 [Solanum tuberosum]
           XP_015168017.1 PREDICTED: DNA repair helicase UVH6
           isoform X1 [Solanum tuberosum]
          Length = 758

 Score = 54.7 bits (130), Expect = 3e-06
 Identities = 26/28 (92%), Positives = 26/28 (92%)
 Frame = +3

Query: 96  SVVSVENRDSVDAGCRKLTASWVRAFAV 179
           SVVS ENRDSVDAGCRKLTASWVRA AV
Sbjct: 120 SVVSAENRDSVDAGCRKLTASWVRAIAV 147


>XP_004240533.1 PREDICTED: DNA repair helicase XPD [Solanum lycopersicum]
          Length = 758

 Score = 54.7 bits (130), Expect = 3e-06
 Identities = 26/28 (92%), Positives = 26/28 (92%)
 Frame = +3

Query: 96  SVVSVENRDSVDAGCRKLTASWVRAFAV 179
           SVVS ENRDSVDAGCRKLTASWVRA AV
Sbjct: 120 SVVSAENRDSVDAGCRKLTASWVRAIAV 147


>KNA08988.1 hypothetical protein SOVF_157750, partial [Spinacia oleracea]
          Length = 758

 Score = 53.5 bits (127), Expect = 8e-06
 Identities = 25/28 (89%), Positives = 26/28 (92%)
 Frame = +3

Query: 96  SVVSVENRDSVDAGCRKLTASWVRAFAV 179
           +VVS ENRDSVDAGCRKLTASWVRA AV
Sbjct: 120 AVVSAENRDSVDAGCRKLTASWVRALAV 147


>XP_002277634.1 PREDICTED: DNA repair helicase XPD [Vitis vinifera]
          Length = 758

 Score = 53.5 bits (127), Expect = 8e-06
 Identities = 25/28 (89%), Positives = 26/28 (92%)
 Frame = +3

Query: 96  SVVSVENRDSVDAGCRKLTASWVRAFAV 179
           +VVS ENRDSVDAGCRKLTASWVRA AV
Sbjct: 120 AVVSAENRDSVDAGCRKLTASWVRALAV 147


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