BLASTX nr result
ID: Panax25_contig00023589
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax25_contig00023589
(605 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_019249528.1 PREDICTED: uncharacterized protein LOC109228780 [... 58 2e-06
XP_009800755.1 PREDICTED: uncharacterized protein LOC104246608 [... 58 2e-06
JAU96150.1 E3 ubiquitin-protein ligase MARCH3 [Noccaea caerulesc... 58 2e-06
JAU39302.1 E3 ubiquitin-protein ligase MARCH3 [Noccaea caerulesc... 58 2e-06
JAU18650.1 E3 ubiquitin-protein ligase MARCH3 [Noccaea caerulesc... 58 2e-06
XP_009118228.1 PREDICTED: E3 ubiquitin-protein ligase MARCH1 [Br... 57 3e-06
XP_006417397.1 hypothetical protein EUTSA_v10008262mg [Eutrema s... 57 3e-06
XP_013657418.1 PREDICTED: uncharacterized protein LOC106362131 [... 57 3e-06
AAM65602.1 unknown [Arabidopsis thaliana] 57 3e-06
NP_563883.1 RING/FYVE/PHD zinc finger superfamily protein [Arabi... 57 3e-06
XP_018434753.1 PREDICTED: uncharacterized protein LOC108807018 [... 57 3e-06
XP_009144403.1 PREDICTED: uncharacterized protein LOC103868064 [... 57 4e-06
CDY20976.1 BnaA08g25490D [Brassica napus] 57 4e-06
XP_013749132.1 PREDICTED: uncharacterized protein LOC106451714 [... 57 4e-06
XP_013600727.1 PREDICTED: uncharacterized protein LOC106308143 [... 57 4e-06
CDY20590.1 BnaC08g14680D [Brassica napus] 57 4e-06
XP_010533189.1 PREDICTED: uncharacterized protein LOC104809010 [... 56 5e-06
CDP03400.1 unnamed protein product [Coffea canephora] 56 7e-06
AFK48121.1 unknown [Lotus japonicus] 55 1e-05
XP_017253150.1 PREDICTED: E3 ubiquitin-protein ligase MARCH4-lik... 55 1e-05
>XP_019249528.1 PREDICTED: uncharacterized protein LOC109228780 [Nicotiana
attenuata] XP_019249529.1 PREDICTED: uncharacterized
protein LOC109228780 [Nicotiana attenuata]
XP_019249530.1 PREDICTED: uncharacterized protein
LOC109228780 [Nicotiana attenuata] OIT00238.1
hypothetical protein A4A49_08441 [Nicotiana attenuata]
Length = 306
Score = 57.8 bits (138), Expect = 2e-06
Identities = 29/35 (82%), Positives = 30/35 (85%), Gaps = 3/35 (8%)
Frame = -1
Query: 281 VIAVIAGFAYLLDKDGTFRNSFN---DRILSKHPI 186
VIA+I GF YLLDKDGTFRNSFN DRILSKHPI
Sbjct: 140 VIALIGGFTYLLDKDGTFRNSFNDSWDRILSKHPI 174
>XP_009800755.1 PREDICTED: uncharacterized protein LOC104246608 [Nicotiana
sylvestris] XP_016505230.1 PREDICTED: uncharacterized
protein LOC107823149 [Nicotiana tabacum]
Length = 306
Score = 57.8 bits (138), Expect = 2e-06
Identities = 29/35 (82%), Positives = 30/35 (85%), Gaps = 3/35 (8%)
Frame = -1
Query: 281 VIAVIAGFAYLLDKDGTFRNSFN---DRILSKHPI 186
VIA+I GF YLLDKDGTFRNSFN DRILSKHPI
Sbjct: 140 VIALIGGFTYLLDKDGTFRNSFNDSWDRILSKHPI 174
>JAU96150.1 E3 ubiquitin-protein ligase MARCH3 [Noccaea caerulescens]
Length = 318
Score = 57.8 bits (138), Expect = 2e-06
Identities = 29/35 (82%), Positives = 31/35 (88%), Gaps = 3/35 (8%)
Frame = -1
Query: 281 VIAVIAGFAYLLDKDGTFRNSFN---DRILSKHPI 186
VIAVIAGFAY++DKDG FRNSFN DRILSKHPI
Sbjct: 152 VIAVIAGFAYVMDKDGEFRNSFNDDWDRILSKHPI 186
>JAU39302.1 E3 ubiquitin-protein ligase MARCH3 [Noccaea caerulescens]
Length = 318
Score = 57.8 bits (138), Expect = 2e-06
Identities = 29/35 (82%), Positives = 31/35 (88%), Gaps = 3/35 (8%)
Frame = -1
Query: 281 VIAVIAGFAYLLDKDGTFRNSFN---DRILSKHPI 186
VIAVIAGFAY++DKDG FRNSFN DRILSKHPI
Sbjct: 152 VIAVIAGFAYVMDKDGEFRNSFNDDWDRILSKHPI 186
>JAU18650.1 E3 ubiquitin-protein ligase MARCH3 [Noccaea caerulescens]
JAU69889.1 E3 ubiquitin-protein ligase MARCH3 [Noccaea
caerulescens]
Length = 318
Score = 57.8 bits (138), Expect = 2e-06
Identities = 29/35 (82%), Positives = 31/35 (88%), Gaps = 3/35 (8%)
Frame = -1
Query: 281 VIAVIAGFAYLLDKDGTFRNSFN---DRILSKHPI 186
VIAVIAGFAY++DKDG FRNSFN DRILSKHPI
Sbjct: 152 VIAVIAGFAYVMDKDGEFRNSFNDDWDRILSKHPI 186
>XP_009118228.1 PREDICTED: E3 ubiquitin-protein ligase MARCH1 [Brassica rapa]
CDY34864.1 BnaA09g47900D [Brassica napus]
Length = 312
Score = 57.0 bits (136), Expect = 3e-06
Identities = 28/35 (80%), Positives = 31/35 (88%), Gaps = 3/35 (8%)
Frame = -1
Query: 281 VIAVIAGFAYLLDKDGTFRNSFN---DRILSKHPI 186
VIAV+AGFAY++DKDG FRNSFN DRILSKHPI
Sbjct: 146 VIAVMAGFAYMMDKDGEFRNSFNDNWDRILSKHPI 180
>XP_006417397.1 hypothetical protein EUTSA_v10008262mg [Eutrema salsugineum]
ESQ35750.1 hypothetical protein EUTSA_v10008262mg
[Eutrema salsugineum]
Length = 312
Score = 57.0 bits (136), Expect = 3e-06
Identities = 28/35 (80%), Positives = 31/35 (88%), Gaps = 3/35 (8%)
Frame = -1
Query: 281 VIAVIAGFAYLLDKDGTFRNSFN---DRILSKHPI 186
VIAV+AGFAY++DKDG FRNSFN DRILSKHPI
Sbjct: 146 VIAVMAGFAYMMDKDGEFRNSFNDDWDRILSKHPI 180
>XP_013657418.1 PREDICTED: uncharacterized protein LOC106362131 [Brassica napus]
XP_013657787.1 PREDICTED: uncharacterized protein
LOC106362436 [Brassica napus]
Length = 320
Score = 57.0 bits (136), Expect = 3e-06
Identities = 28/35 (80%), Positives = 31/35 (88%), Gaps = 3/35 (8%)
Frame = -1
Query: 281 VIAVIAGFAYLLDKDGTFRNSFN---DRILSKHPI 186
VIAV+AGFAY++DKDG FRNSFN DRILSKHPI
Sbjct: 154 VIAVMAGFAYIMDKDGEFRNSFNDDWDRILSKHPI 188
>AAM65602.1 unknown [Arabidopsis thaliana]
Length = 320
Score = 57.0 bits (136), Expect = 3e-06
Identities = 28/35 (80%), Positives = 31/35 (88%), Gaps = 3/35 (8%)
Frame = -1
Query: 281 VIAVIAGFAYLLDKDGTFRNSFN---DRILSKHPI 186
VIAV+AGFAY++DKDG FRNSFN DRILSKHPI
Sbjct: 154 VIAVMAGFAYMMDKDGEFRNSFNDDWDRILSKHPI 188
>NP_563883.1 RING/FYVE/PHD zinc finger superfamily protein [Arabidopsis
thaliana] BAC42070.1 unknown protein [Arabidopsis
thaliana] AAO50466.1 unknown protein [Arabidopsis
thaliana] BAD44249.1 unknown protein [Arabidopsis
thaliana] AEE28675.1 RING/FYVE/PHD zinc finger
superfamily protein [Arabidopsis thaliana] OAP17594.1
hypothetical protein AXX17_AT1G11250 [Arabidopsis
thaliana]
Length = 321
Score = 57.0 bits (136), Expect = 3e-06
Identities = 28/35 (80%), Positives = 31/35 (88%), Gaps = 3/35 (8%)
Frame = -1
Query: 281 VIAVIAGFAYLLDKDGTFRNSFN---DRILSKHPI 186
VIAV+AGFAY++DKDG FRNSFN DRILSKHPI
Sbjct: 155 VIAVMAGFAYMMDKDGEFRNSFNDDWDRILSKHPI 189
>XP_018434753.1 PREDICTED: uncharacterized protein LOC108807018 [Raphanus sativus]
Length = 327
Score = 57.0 bits (136), Expect = 3e-06
Identities = 28/35 (80%), Positives = 31/35 (88%), Gaps = 3/35 (8%)
Frame = -1
Query: 281 VIAVIAGFAYLLDKDGTFRNSFN---DRILSKHPI 186
VIAV+AGFAY++DKDG FRNSFN DRILSKHPI
Sbjct: 161 VIAVMAGFAYIMDKDGEFRNSFNDDWDRILSKHPI 195
>XP_009144403.1 PREDICTED: uncharacterized protein LOC103868064 [Brassica rapa]
Length = 320
Score = 56.6 bits (135), Expect = 4e-06
Identities = 28/35 (80%), Positives = 31/35 (88%), Gaps = 3/35 (8%)
Frame = -1
Query: 281 VIAVIAGFAYLLDKDGTFRNSFN---DRILSKHPI 186
VIAV+AGFAY++DKDG FRNSFN DRILSKHPI
Sbjct: 154 VIAVMAGFAYVMDKDGEFRNSFNDDWDRILSKHPI 188
>CDY20976.1 BnaA08g25490D [Brassica napus]
Length = 320
Score = 56.6 bits (135), Expect = 4e-06
Identities = 28/35 (80%), Positives = 31/35 (88%), Gaps = 3/35 (8%)
Frame = -1
Query: 281 VIAVIAGFAYLLDKDGTFRNSFN---DRILSKHPI 186
VIAV+AGFAY++DKDG FRNSFN DRILSKHPI
Sbjct: 154 VIAVMAGFAYVMDKDGEFRNSFNDDWDRILSKHPI 188
>XP_013749132.1 PREDICTED: uncharacterized protein LOC106451714 [Brassica napus]
XP_013702052.1 PREDICTED: uncharacterized protein
LOC106406016 [Brassica napus]
Length = 321
Score = 56.6 bits (135), Expect = 4e-06
Identities = 28/35 (80%), Positives = 31/35 (88%), Gaps = 3/35 (8%)
Frame = -1
Query: 281 VIAVIAGFAYLLDKDGTFRNSFN---DRILSKHPI 186
VIAV+AGFAY++DKDG FRNSFN DRILSKHPI
Sbjct: 155 VIAVMAGFAYVMDKDGEFRNSFNDDWDRILSKHPI 189
>XP_013600727.1 PREDICTED: uncharacterized protein LOC106308143 [Brassica oleracea
var. oleracea]
Length = 322
Score = 56.6 bits (135), Expect = 4e-06
Identities = 28/35 (80%), Positives = 31/35 (88%), Gaps = 3/35 (8%)
Frame = -1
Query: 281 VIAVIAGFAYLLDKDGTFRNSFN---DRILSKHPI 186
VIAV+AGFAY++DKDG FRNSFN DRILSKHPI
Sbjct: 156 VIAVMAGFAYVMDKDGEFRNSFNDDWDRILSKHPI 190
>CDY20590.1 BnaC08g14680D [Brassica napus]
Length = 328
Score = 56.6 bits (135), Expect = 4e-06
Identities = 28/35 (80%), Positives = 31/35 (88%), Gaps = 3/35 (8%)
Frame = -1
Query: 281 VIAVIAGFAYLLDKDGTFRNSFN---DRILSKHPI 186
VIAV+AGFAY++DKDG FRNSFN DRILSKHPI
Sbjct: 155 VIAVMAGFAYVMDKDGEFRNSFNDDWDRILSKHPI 189
>XP_010533189.1 PREDICTED: uncharacterized protein LOC104809010 [Tarenaya
hassleriana]
Length = 316
Score = 56.2 bits (134), Expect = 5e-06
Identities = 28/35 (80%), Positives = 31/35 (88%), Gaps = 3/35 (8%)
Frame = -1
Query: 281 VIAVIAGFAYLLDKDGTFRNSFN---DRILSKHPI 186
VIAV+AGFAYL+DKDG FRNSF+ DRILSKHPI
Sbjct: 150 VIAVMAGFAYLMDKDGAFRNSFDDDWDRILSKHPI 184
>CDP03400.1 unnamed protein product [Coffea canephora]
Length = 315
Score = 55.8 bits (133), Expect = 7e-06
Identities = 27/35 (77%), Positives = 31/35 (88%), Gaps = 3/35 (8%)
Frame = -1
Query: 281 VIAVIAGFAYLLDKDGTFRNSFN---DRILSKHPI 186
VIA+I GFAYL+D+DG+FRNSFN DRILSKHPI
Sbjct: 149 VIAMIGGFAYLMDRDGSFRNSFNDSWDRILSKHPI 183
>AFK48121.1 unknown [Lotus japonicus]
Length = 307
Score = 55.5 bits (132), Expect = 1e-05
Identities = 27/35 (77%), Positives = 30/35 (85%), Gaps = 3/35 (8%)
Frame = -1
Query: 281 VIAVIAGFAYLLDKDGTFRNSFN---DRILSKHPI 186
VIA I GFAY++DKDGTFRNSF+ DRILSKHPI
Sbjct: 141 VIAAIGGFAYIMDKDGTFRNSFDDGWDRILSKHPI 175
>XP_017253150.1 PREDICTED: E3 ubiquitin-protein ligase MARCH4-like [Daucus carota
subsp. sativus] KZM94603.1 hypothetical protein
DCAR_017846 [Daucus carota subsp. sativus]
Length = 313
Score = 55.5 bits (132), Expect = 1e-05
Identities = 28/35 (80%), Positives = 31/35 (88%), Gaps = 3/35 (8%)
Frame = -1
Query: 281 VIAVIAGFAYLLDKDGTFRNSFN---DRILSKHPI 186
VIAVIAG AYLLDKDG+FRNSF+ DR+LSKHPI
Sbjct: 147 VIAVIAGLAYLLDKDGSFRNSFDDSWDRLLSKHPI 181