BLASTX nr result

ID: Panax25_contig00023529 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00023529
         (587 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BAI67716.1 nuclear matrix constituent protein 2 [Apium graveolens]     89   3e-17
KZM88757.1 hypothetical protein DCAR_025832 [Daucus carota subsp...    80   6e-14
XP_017218673.1 PREDICTED: protein CROWDED NUCLEI 4-like [Daucus ...    80   6e-14
BAI67718.1 nuclear matrix constituent protein 2 [Daucus carota]        80   6e-14
CDP02647.1 unnamed protein product [Coffea canephora]                  71   5e-11
XP_016496683.1 PREDICTED: protein CROWDED NUCLEI 4-like [Nicotia...    71   7e-11
XP_009592891.1 PREDICTED: protein CROWDED NUCLEI 4 [Nicotiana to...    70   9e-11
XP_019267373.1 PREDICTED: protein CROWDED NUCLEI 4 [Nicotiana at...    67   1e-09
XP_016560902.1 PREDICTED: protein CROWDED NUCLEI 4 [Capsicum ann...    64   1e-08
XP_016474415.1 PREDICTED: protein CROWDED NUCLEI 4-like [Nicotia...    64   2e-08
XP_009776304.1 PREDICTED: putative nuclear matrix constituent pr...    64   2e-08
XP_006363793.1 PREDICTED: protein CROWDED NUCLEI 4-like [Solanum...    62   5e-08
XP_012854207.1 PREDICTED: protein CROWDED NUCLEI 4 [Erythranthe ...    61   1e-07
XP_004231953.1 PREDICTED: protein CROWDED NUCLEI 4 [Solanum lyco...    60   2e-07
XP_015066072.1 PREDICTED: protein CROWDED NUCLEI 4 [Solanum penn...    60   2e-07

>BAI67716.1 nuclear matrix constituent protein 2 [Apium graveolens]
          Length = 925

 Score = 89.4 bits (220), Expect = 3e-17
 Identities = 49/76 (64%), Positives = 57/76 (75%), Gaps = 3/76 (3%)
 Frame = +1

Query: 1    AVKSLNQTPVRAKETTVYIDKIITIREVTSVDGGGVMGDSQHQEDAISRESDEKLVDNGD 180
            AVKS+NQ PV AKETTVYIDKIITIREVTS + G V G+SQ  E  +S  +DEKL  N D
Sbjct: 842  AVKSVNQAPVHAKETTVYIDKIITIREVTSFNDGRVNGNSQDPEKGLSLSADEKLEGNDD 901

Query: 181  FES---DKNGEVKQKV 219
             +S   +KNGEVKQK+
Sbjct: 902  IKSVKPNKNGEVKQKM 917


>KZM88757.1 hypothetical protein DCAR_025832 [Daucus carota subsp. sativus]
          Length = 899

 Score = 79.7 bits (195), Expect = 6e-14
 Identities = 46/85 (54%), Positives = 63/85 (74%), Gaps = 4/85 (4%)
 Frame = +1

Query: 1    AVKSLNQ-TPVRAKETTVYIDKIITIREVTSVDGGGVMGDSQHQEDAISRESDEKLVDNG 177
            AV S NQ TPV AKETTVYIDKIITIREVTS +   V G++Q+ E+A+S+ ++EKL D+ 
Sbjct: 815  AVISANQQTPVHAKETTVYIDKIITIREVTSFNDAIVDGNNQNLEEALSQRAEEKLEDDN 874

Query: 178  DFES---DKNGEVKQKVERMTRSKQ 243
            + ES   +KNGEV  K+ + + ++Q
Sbjct: 875  NIESEKLEKNGEVDPKIMQASLTEQ 899


>XP_017218673.1 PREDICTED: protein CROWDED NUCLEI 4-like [Daucus carota subsp.
            sativus]
          Length = 927

 Score = 79.7 bits (195), Expect = 6e-14
 Identities = 46/85 (54%), Positives = 63/85 (74%), Gaps = 4/85 (4%)
 Frame = +1

Query: 1    AVKSLNQ-TPVRAKETTVYIDKIITIREVTSVDGGGVMGDSQHQEDAISRESDEKLVDNG 177
            AV S NQ TPV AKETTVYIDKIITIREVTS +   V G++Q+ E+A+S+ ++EKL D+ 
Sbjct: 843  AVISANQQTPVHAKETTVYIDKIITIREVTSFNDAIVDGNNQNLEEALSQRAEEKLEDDN 902

Query: 178  DFES---DKNGEVKQKVERMTRSKQ 243
            + ES   +KNGEV  K+ + + ++Q
Sbjct: 903  NIESEKLEKNGEVDPKIMQASLTEQ 927


>BAI67718.1 nuclear matrix constituent protein 2 [Daucus carota]
          Length = 927

 Score = 79.7 bits (195), Expect = 6e-14
 Identities = 46/85 (54%), Positives = 63/85 (74%), Gaps = 4/85 (4%)
 Frame = +1

Query: 1    AVKSLNQ-TPVRAKETTVYIDKIITIREVTSVDGGGVMGDSQHQEDAISRESDEKLVDNG 177
            AV S NQ TPV AKETTVYIDKIITIREVTS +   V G++Q+ E+A+S+ ++EKL D+ 
Sbjct: 843  AVISANQQTPVHAKETTVYIDKIITIREVTSFNDAIVDGNNQNLEEALSQRAEEKLEDDN 902

Query: 178  DFES---DKNGEVKQKVERMTRSKQ 243
            + ES   +KNGEV  K+ + + ++Q
Sbjct: 903  NIESEKLEKNGEVDPKIMQASLTEQ 927


>CDP02647.1 unnamed protein product [Coffea canephora]
          Length = 910

 Score = 71.2 bits (173), Expect = 5e-11
 Identities = 39/66 (59%), Positives = 48/66 (72%)
 Frame = +1

Query: 1    AVKSLNQTPVRAKETTVYIDKIITIREVTSVDGGGVMGDSQHQEDAISRESDEKLVDNGD 180
            A K +NQTPV A+ETTVYIDKIITIREVTSVD G   GDSQ   + + +ESD+ L +N  
Sbjct: 837  AAKPINQTPVGAEETTVYIDKIITIREVTSVDVGRASGDSQ---EFVPQESDDILDNNNG 893

Query: 181  FESDKN 198
             +S+ N
Sbjct: 894  LKSNDN 899


>XP_016496683.1 PREDICTED: protein CROWDED NUCLEI 4-like [Nicotiana tabacum]
          Length = 937

 Score = 70.9 bits (172), Expect = 7e-11
 Identities = 35/77 (45%), Positives = 57/77 (74%)
 Frame = +1

Query: 16   NQTPVRAKETTVYIDKIITIREVTSVDGGGVMGDSQHQEDAISRESDEKLVDNGDFESDK 195
            +QTP+ A ETTVY+DKI+T+REVT++D   V   ++  ++ +S ES +K+ +NG  ESD+
Sbjct: 865  DQTPIAAAETTVYVDKIVTVREVTTID---VKKATEASQETLSGESGQKVRNNGSLESDQ 921

Query: 196  NGEVKQKVERMTRSKQK 246
            NG+++ +  R TR+K+K
Sbjct: 922  NGKLEGR-SRRTRAKRK 937


>XP_009592891.1 PREDICTED: protein CROWDED NUCLEI 4 [Nicotiana tomentosiformis]
          Length = 937

 Score = 70.5 bits (171), Expect = 9e-11
 Identities = 35/76 (46%), Positives = 56/76 (73%)
 Frame = +1

Query: 19   QTPVRAKETTVYIDKIITIREVTSVDGGGVMGDSQHQEDAISRESDEKLVDNGDFESDKN 198
            QTP+ A ETTVY+DKI+T+REVT++D   V   ++  ++ +S ES +K+ +NG  ESD+N
Sbjct: 866  QTPIAAAETTVYVDKIVTVREVTTID---VKKATEASQETLSGESGQKVRNNGSLESDQN 922

Query: 199  GEVKQKVERMTRSKQK 246
            G+++ +  R TR+K+K
Sbjct: 923  GKLEGR-SRRTRAKRK 937


>XP_019267373.1 PREDICTED: protein CROWDED NUCLEI 4 [Nicotiana attenuata] OIT34422.1
            protein crowded nuclei 4 [Nicotiana attenuata]
          Length = 939

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 37/77 (48%), Positives = 54/77 (70%)
 Frame = +1

Query: 16   NQTPVRAKETTVYIDKIITIREVTSVDGGGVMGDSQHQEDAISRESDEKLVDNGDFESDK 195
            +Q PV A ETTVY+DKI+T+REVT++D   V   SQ   + +S ES +K  +NG  ESD+
Sbjct: 867  DQIPVAAAETTVYVDKIVTVREVTTIDVKKVTEGSQ---ETLSGESGQKAGNNGSLESDQ 923

Query: 196  NGEVKQKVERMTRSKQK 246
            NG+ + + +R TR+K+K
Sbjct: 924  NGKPEGRSQR-TRAKRK 939


>XP_016560902.1 PREDICTED: protein CROWDED NUCLEI 4 [Capsicum annuum]
          Length = 938

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 34/77 (44%), Positives = 53/77 (68%)
 Frame = +1

Query: 16   NQTPVRAKETTVYIDKIITIREVTSVDGGGVMGDSQHQEDAISRESDEKLVDNGDFESDK 195
            +QTP+ A+ETTVYIDKI+T+ EVT ++   V    +   + +SRESD+K+  NG  ES++
Sbjct: 866  DQTPIAAEETTVYIDKIVTVHEVTEIN---VQKVPEGSPEILSRESDKKVGKNGSLESNE 922

Query: 196  NGEVKQKVERMTRSKQK 246
            NG+ + +  R TR+ +K
Sbjct: 923  NGKPEGR-SRRTRATRK 938


>XP_016474415.1 PREDICTED: protein CROWDED NUCLEI 4-like [Nicotiana tabacum]
          Length = 938

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 34/77 (44%), Positives = 53/77 (68%)
 Frame = +1

Query: 16   NQTPVRAKETTVYIDKIITIREVTSVDGGGVMGDSQHQEDAISRESDEKLVDNGDFESDK 195
            +Q P+ A ETTV++DKI+T+REVT++D   V   SQ   + +S ES +K+ +N   ESD+
Sbjct: 866  DQIPIAAAETTVHVDKIVTVREVTTIDVKKVTEGSQ---ETLSEESGQKVGNNDSLESDR 922

Query: 196  NGEVKQKVERMTRSKQK 246
            NG+ + +  R TR+K+K
Sbjct: 923  NGKPEGR-SRRTRAKRK 938


>XP_009776304.1 PREDICTED: putative nuclear matrix constituent protein 1-like protein
            [Nicotiana sylvestris]
          Length = 938

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 34/77 (44%), Positives = 53/77 (68%)
 Frame = +1

Query: 16   NQTPVRAKETTVYIDKIITIREVTSVDGGGVMGDSQHQEDAISRESDEKLVDNGDFESDK 195
            +Q P+ A ETTV++DKI+T+REVT++D   V   SQ   + +S ES +K+ +N   ESD+
Sbjct: 866  DQIPIAAVETTVHVDKIVTVREVTTIDVKKVTEGSQ---ETLSEESGQKVGNNDSLESDR 922

Query: 196  NGEVKQKVERMTRSKQK 246
            NG+ + +  R TR+K+K
Sbjct: 923  NGKPEGR-SRRTRAKRK 938


>XP_006363793.1 PREDICTED: protein CROWDED NUCLEI 4-like [Solanum tuberosum]
          Length = 937

 Score = 62.4 bits (150), Expect = 5e-08
 Identities = 33/77 (42%), Positives = 51/77 (66%)
 Frame = +1

Query: 16   NQTPVRAKETTVYIDKIITIREVTSVDGGGVMGDSQHQEDAISRESDEKLVDNGDFESDK 195
            N TP+ A+ETTVYIDKI+T+ EVT +D   V   ++   + +S ES  K+ +NG  +SDK
Sbjct: 865  NHTPIAAEETTVYIDKIVTVHEVTEID---VRKVTEGSLETLSGESGRKVGNNGSLQSDK 921

Query: 196  NGEVKQKVERMTRSKQK 246
            NG+ + +  R T++ +K
Sbjct: 922  NGKPEGR-SRRTKATRK 937


>XP_012854207.1 PREDICTED: protein CROWDED NUCLEI 4 [Erythranthe guttata] EYU44530.1
            hypothetical protein MIMGU_mgv1a000959mg [Erythranthe
            guttata]
          Length = 932

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 36/68 (52%), Positives = 46/68 (67%)
 Frame = +1

Query: 4    VKSLNQTPVRAKETTVYIDKIITIREVTSVDGGGVMGDSQHQEDAISRESDEKLVDNGDF 183
            V   NQTP    ETTVYIDKIITI+EVT+VD   + GD+   E+A  +  DEKL +NGD 
Sbjct: 869  VTQFNQTP-DGGETTVYIDKIITIQEVTTVDVERITGDN---EEAEFQHKDEKLENNGDV 924

Query: 184  ESDKNGEV 207
            E + NG++
Sbjct: 925  ELEINGKL 932


>XP_004231953.1 PREDICTED: protein CROWDED NUCLEI 4 [Solanum lycopersicum]
          Length = 936

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 33/77 (42%), Positives = 50/77 (64%)
 Frame = +1

Query: 16   NQTPVRAKETTVYIDKIITIREVTSVDGGGVMGDSQHQEDAISRESDEKLVDNGDFESDK 195
            NQT + A+ETTVYIDKI+T+ EVT +D   V   ++     +S +S  K+ +NG  ESD+
Sbjct: 864  NQTHIAAEETTVYIDKIVTVHEVTEID---VRKVTEGSPGTLSGDSGRKVGNNGSLESDQ 920

Query: 196  NGEVKQKVERMTRSKQK 246
            NG+ + +  R TR+ +K
Sbjct: 921  NGKPEGRARR-TRATRK 936


>XP_015066072.1 PREDICTED: protein CROWDED NUCLEI 4 [Solanum pennellii]
          Length = 937

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 33/77 (42%), Positives = 50/77 (64%)
 Frame = +1

Query: 16   NQTPVRAKETTVYIDKIITIREVTSVDGGGVMGDSQHQEDAISRESDEKLVDNGDFESDK 195
            NQT + A+ETTVYIDKI+T+ EVT +D   V   ++     +S +S  K+ +NG  ESD+
Sbjct: 865  NQTHIAAEETTVYIDKIVTVHEVTEID---VRKVTEGSPGTLSGDSGRKVGNNGSLESDQ 921

Query: 196  NGEVKQKVERMTRSKQK 246
            NG+ + +  R TR+ +K
Sbjct: 922  NGKPEGRARR-TRATRK 937


Top