BLASTX nr result
ID: Panax25_contig00023500
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax25_contig00023500
(3353 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_007013126.1 PREDICTED: transcription initiation factor TFIID ... 50 2e-10
CDP03310.1 unnamed protein product [Coffea canephora] 55 2e-10
KHG16411.1 TATA-binding-associated factor 2N [Gossypium arboreum] 55 3e-10
XP_017625866.1 PREDICTED: transcription initiation factor TFIID ... 55 3e-10
XP_016720465.1 PREDICTED: transcription initiation factor TFIID ... 55 3e-10
XP_017222747.1 PREDICTED: RNA-binding protein EWS isoform X1 [Da... 51 5e-10
KZM83882.1 hypothetical protein DCAR_028696 [Daucus carota subsp... 51 5e-10
XP_017222748.1 PREDICTED: uncharacterized protein LOC108199448 i... 51 5e-10
XP_016728314.1 PREDICTED: transcription initiation factor TFIID ... 53 1e-09
XP_012477193.1 PREDICTED: transcription initiation factor TFIID ... 53 1e-09
XP_002514277.2 PREDICTED: LOW QUALITY PROTEIN: RNA-binding prote... 48 1e-09
EEF48231.1 conserved hypothetical protein [Ricinus communis] 48 1e-09
XP_018815140.1 PREDICTED: transcription initiation factor TFIID ... 47 4e-09
GAV78425.1 zf-RanBP domain-containing protein [Cephalotus follic... 46 9e-09
OAY53780.1 hypothetical protein MANES_03G023100 [Manihot esculenta] 47 1e-08
OAY53778.1 hypothetical protein MANES_03G023100 [Manihot esculen... 47 1e-08
XP_011009952.1 PREDICTED: polyadenylation factor subunit 2-like ... 46 2e-08
XP_006381723.1 RNA-binding family protein [Populus trichocarpa] ... 46 2e-08
XP_002284247.1 PREDICTED: transcription initiation factor TFIID ... 48 2e-08
XP_008462733.1 PREDICTED: uncharacterized protein LOC103501026 i... 50 5e-08
>XP_007013126.1 PREDICTED: transcription initiation factor TFIID subunit 15
[Theobroma cacao] EOY30745.1 RNA-binding protein-related
[Theobroma cacao]
Length = 373
Score = 50.4 bits (119), Expect(2) = 2e-10
Identities = 25/42 (59%), Positives = 31/42 (73%), Gaps = 1/42 (2%)
Frame = +2
Query: 725 DRPDYLEDDFRERSRLDRPMPQLDWG-RDRGRDNMNIS*VGY 847
DR D+L+DD+R R+R DRPMP +DWG RDRGR+N GY
Sbjct: 267 DRLDFLDDDYRGRNRFDRPMP-MDWGHRDRGRENFFNERKGY 307
Score = 46.6 bits (109), Expect(2) = 2e-10
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = +3
Query: 654 SPPRSWARDGPRELGLGGPPHPR 722
SPPR WAR+GPRE G GGPP PR
Sbjct: 232 SPPRGWAREGPREFGAGGPPPPR 254
>CDP03310.1 unnamed protein product [Coffea canephora]
Length = 318
Score = 54.7 bits (130), Expect(2) = 2e-10
Identities = 27/42 (64%), Positives = 31/42 (73%), Gaps = 1/42 (2%)
Frame = +2
Query: 725 DRPDYLEDDFRERSRLDRPMPQLDWG-RDRGRDNMNIS*VGY 847
DRPDY EDD+RER+R DRP+P LDW RDR RDN+ GY
Sbjct: 218 DRPDYAEDDYRERNRFDRPIP-LDWAHRDRARDNLFNERKGY 258
Score = 42.4 bits (98), Expect(2) = 2e-10
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = +3
Query: 654 SPPRSWARDGPRELGLGGPPHPR 722
SPPR WARD PR+ GGPP+PR
Sbjct: 183 SPPRGWARDEPRDFRAGGPPYPR 205
>KHG16411.1 TATA-binding-associated factor 2N [Gossypium arboreum]
Length = 388
Score = 54.7 bits (130), Expect(2) = 3e-10
Identities = 28/42 (66%), Positives = 32/42 (76%), Gaps = 1/42 (2%)
Frame = +2
Query: 725 DRPDYLEDDFRERSRLDRPMPQLDWG-RDRGRDNMNIS*VGY 847
DR +YL+DD+R RSR DRPMP +DWG RDRGRDN S GY
Sbjct: 282 DRLEYLDDDYRGRSRFDRPMP-MDWGQRDRGRDNFFNSRKGY 322
Score = 41.6 bits (96), Expect(2) = 3e-10
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = +3
Query: 654 SPPRSWARDGPRELGLGGPPHPR 722
SPPRSWAR+GPR+ GPP PR
Sbjct: 247 SPPRSWAREGPRDFRAAGPPPPR 269
>XP_017625866.1 PREDICTED: transcription initiation factor TFIID subunit 15
[Gossypium arboreum]
Length = 376
Score = 54.7 bits (130), Expect(2) = 3e-10
Identities = 28/42 (66%), Positives = 32/42 (76%), Gaps = 1/42 (2%)
Frame = +2
Query: 725 DRPDYLEDDFRERSRLDRPMPQLDWG-RDRGRDNMNIS*VGY 847
DR +YL+DD+R RSR DRPMP +DWG RDRGRDN S GY
Sbjct: 270 DRLEYLDDDYRGRSRFDRPMP-MDWGQRDRGRDNFFNSRKGY 310
Score = 41.6 bits (96), Expect(2) = 3e-10
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = +3
Query: 654 SPPRSWARDGPRELGLGGPPHPR 722
SPPRSWAR+GPR+ GPP PR
Sbjct: 235 SPPRSWAREGPRDFRAAGPPPPR 257
>XP_016720465.1 PREDICTED: transcription initiation factor TFIID subunit 15-like
[Gossypium hirsutum]
Length = 376
Score = 54.7 bits (130), Expect(2) = 3e-10
Identities = 28/42 (66%), Positives = 32/42 (76%), Gaps = 1/42 (2%)
Frame = +2
Query: 725 DRPDYLEDDFRERSRLDRPMPQLDWG-RDRGRDNMNIS*VGY 847
DR +YL+DD+R RSR DRPMP +DWG RDRGRDN S GY
Sbjct: 270 DRLEYLDDDYRGRSRFDRPMP-MDWGQRDRGRDNFFNSRKGY 310
Score = 41.6 bits (96), Expect(2) = 3e-10
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = +3
Query: 654 SPPRSWARDGPRELGLGGPPHPR 722
SPPRSWAR+GPR+ GPP PR
Sbjct: 235 SPPRSWAREGPRDFRAAGPPPPR 257
>XP_017222747.1 PREDICTED: RNA-binding protein EWS isoform X1 [Daucus carota subsp.
sativus]
Length = 391
Score = 51.2 bits (121), Expect(2) = 5e-10
Identities = 23/41 (56%), Positives = 30/41 (73%)
Frame = +2
Query: 725 DRPDYLEDDFRERSRLDRPMPQLDWGRDRGRDNMNIS*VGY 847
D PDY+ED FR+R R++RPMP LDW R+R RD++ GY
Sbjct: 248 DHPDYIEDRFRDRPRIERPMP-LDWDRERERDHLLSDRKGY 287
Score = 44.3 bits (103), Expect(2) = 5e-10
Identities = 17/23 (73%), Positives = 19/23 (82%)
Frame = +3
Query: 654 SPPRSWARDGPRELGLGGPPHPR 722
SPPR WAR GPR+ GLGGPP+ R
Sbjct: 213 SPPRGWARSGPRDFGLGGPPNRR 235
>KZM83882.1 hypothetical protein DCAR_028696 [Daucus carota subsp. sativus]
Length = 382
Score = 51.2 bits (121), Expect(2) = 5e-10
Identities = 23/41 (56%), Positives = 30/41 (73%)
Frame = +2
Query: 725 DRPDYLEDDFRERSRLDRPMPQLDWGRDRGRDNMNIS*VGY 847
D PDY+ED FR+R R++RPMP LDW R+R RD++ GY
Sbjct: 239 DHPDYIEDRFRDRPRIERPMP-LDWDRERERDHLLSDRKGY 278
Score = 44.3 bits (103), Expect(2) = 5e-10
Identities = 17/23 (73%), Positives = 19/23 (82%)
Frame = +3
Query: 654 SPPRSWARDGPRELGLGGPPHPR 722
SPPR WAR GPR+ GLGGPP+ R
Sbjct: 204 SPPRGWARSGPRDFGLGGPPNRR 226
>XP_017222748.1 PREDICTED: uncharacterized protein LOC108199448 isoform X2 [Daucus
carota subsp. sativus] XP_017222749.1 PREDICTED:
uncharacterized protein LOC108199448 isoform X2 [Daucus
carota subsp. sativus]
Length = 353
Score = 51.2 bits (121), Expect(2) = 5e-10
Identities = 23/41 (56%), Positives = 30/41 (73%)
Frame = +2
Query: 725 DRPDYLEDDFRERSRLDRPMPQLDWGRDRGRDNMNIS*VGY 847
D PDY+ED FR+R R++RPMP LDW R+R RD++ GY
Sbjct: 210 DHPDYIEDRFRDRPRIERPMP-LDWDRERERDHLLSDRKGY 249
Score = 44.3 bits (103), Expect(2) = 5e-10
Identities = 17/23 (73%), Positives = 19/23 (82%)
Frame = +3
Query: 654 SPPRSWARDGPRELGLGGPPHPR 722
SPPR WAR GPR+ GLGGPP+ R
Sbjct: 175 SPPRGWARSGPRDFGLGGPPNRR 197
>XP_016728314.1 PREDICTED: transcription initiation factor TFIID subunit 15-like
[Gossypium hirsutum]
Length = 376
Score = 52.8 bits (125), Expect(2) = 1e-09
Identities = 27/42 (64%), Positives = 32/42 (76%), Gaps = 1/42 (2%)
Frame = +2
Query: 725 DRPDYLEDDFRERSRLDRPMPQLDWG-RDRGRDNMNIS*VGY 847
DR +YL+DD+R RSR DRPMP +DWG RDRGRD+ S GY
Sbjct: 270 DRLEYLDDDYRGRSRFDRPMP-MDWGQRDRGRDHFFNSRKGY 310
Score = 41.6 bits (96), Expect(2) = 1e-09
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = +3
Query: 654 SPPRSWARDGPRELGLGGPPHPR 722
SPPRSWAR+GPR+ GPP PR
Sbjct: 235 SPPRSWAREGPRDFRAAGPPPPR 257
>XP_012477193.1 PREDICTED: transcription initiation factor TFIID subunit 15
[Gossypium raimondii] KJB27147.1 hypothetical protein
B456_004G280600 [Gossypium raimondii]
Length = 375
Score = 52.8 bits (125), Expect(2) = 1e-09
Identities = 27/42 (64%), Positives = 32/42 (76%), Gaps = 1/42 (2%)
Frame = +2
Query: 725 DRPDYLEDDFRERSRLDRPMPQLDWG-RDRGRDNMNIS*VGY 847
DR +YL+DD+R RSR DRPMP +DWG RDRGRD+ S GY
Sbjct: 269 DRLEYLDDDYRGRSRFDRPMP-MDWGQRDRGRDHFFNSRKGY 309
Score = 41.6 bits (96), Expect(2) = 1e-09
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = +3
Query: 654 SPPRSWARDGPRELGLGGPPHPR 722
SPPRSWAR+GPR+ GPP PR
Sbjct: 234 SPPRSWAREGPRDFRAAGPPPPR 256
>XP_002514277.2 PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein EWS [Ricinus
communis]
Length = 361
Score = 47.8 bits (112), Expect(2) = 1e-09
Identities = 21/34 (61%), Positives = 29/34 (85%), Gaps = 1/34 (2%)
Frame = +2
Query: 728 RPDYLEDDFRERSRLDRPMPQLDWG-RDRGRDNM 826
RPD+ ED++R R++ DRPMP ++WG RDRGRDN+
Sbjct: 264 RPDFPEDEYRGRNKFDRPMP-MEWGHRDRGRDNV 296
Score = 46.2 bits (108), Expect(2) = 1e-09
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = +3
Query: 654 SPPRSWARDGPRELGLGGPPHPR 722
SPPR WARDGPR+ G GGPP PR
Sbjct: 228 SPPRGWARDGPRDFGPGGPPPPR 250
>EEF48231.1 conserved hypothetical protein [Ricinus communis]
Length = 346
Score = 47.8 bits (112), Expect(2) = 1e-09
Identities = 21/34 (61%), Positives = 29/34 (85%), Gaps = 1/34 (2%)
Frame = +2
Query: 728 RPDYLEDDFRERSRLDRPMPQLDWG-RDRGRDNM 826
RPD+ ED++R R++ DRPMP ++WG RDRGRDN+
Sbjct: 264 RPDFPEDEYRGRNKFDRPMP-MEWGHRDRGRDNV 296
Score = 46.2 bits (108), Expect(2) = 1e-09
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = +3
Query: 654 SPPRSWARDGPRELGLGGPPHPR 722
SPPR WARDGPR+ G GGPP PR
Sbjct: 228 SPPRGWARDGPRDFGPGGPPPPR 250
>XP_018815140.1 PREDICTED: transcription initiation factor TFIID subunit 15-like
[Juglans regia]
Length = 374
Score = 46.6 bits (109), Expect(2) = 4e-09
Identities = 19/27 (70%), Positives = 21/27 (77%)
Frame = +3
Query: 654 SPPRSWARDGPRELGLGGPPHPREIDQ 734
SPPR WARDGPRE G GG P PR+ D+
Sbjct: 232 SPPRGWARDGPREFGAGGLPPPRQEDR 258
Score = 45.8 bits (107), Expect(2) = 4e-09
Identities = 22/33 (66%), Positives = 26/33 (78%), Gaps = 1/33 (3%)
Frame = +2
Query: 725 DRPDYLEDDFRERSRLDRPMPQLDWG-RDRGRD 820
DR DY EDD+R R + DRP+P +DWG RDRGRD
Sbjct: 267 DRLDYPEDDYRGRHKFDRPIP-MDWGHRDRGRD 298
>GAV78425.1 zf-RanBP domain-containing protein [Cephalotus follicularis]
Length = 366
Score = 45.8 bits (107), Expect(2) = 9e-09
Identities = 17/23 (73%), Positives = 19/23 (82%)
Frame = +3
Query: 654 SPPRSWARDGPRELGLGGPPHPR 722
SPPR WA+DGPR+ G GGPP PR
Sbjct: 227 SPPRGWAKDGPRDFGAGGPPPPR 249
Score = 45.4 bits (106), Expect(2) = 9e-09
Identities = 21/34 (61%), Positives = 28/34 (82%), Gaps = 1/34 (2%)
Frame = +2
Query: 725 DRPDYLEDDFRERSRLDRPMPQLDWG-RDRGRDN 823
DR DY ED++R R++ DRPMP ++WG RDRGRD+
Sbjct: 262 DRLDYPEDEYRGRNKFDRPMP-MEWGHRDRGRDS 294
>OAY53780.1 hypothetical protein MANES_03G023100 [Manihot esculenta]
Length = 371
Score = 47.4 bits (111), Expect(2) = 1e-08
Identities = 22/33 (66%), Positives = 27/33 (81%), Gaps = 1/33 (3%)
Frame = +2
Query: 728 RPDYLEDDFRERSRLDRPMPQLDWG-RDRGRDN 823
RPDY +DD+R R++ DR MP +DWG RDRGRDN
Sbjct: 264 RPDYPDDDYRGRNKFDRAMP-VDWGHRDRGRDN 295
Score = 43.1 bits (100), Expect(2) = 1e-08
Identities = 17/23 (73%), Positives = 18/23 (78%)
Frame = +3
Query: 654 SPPRSWARDGPRELGLGGPPHPR 722
SPPR WARDGPR+ G GGPP R
Sbjct: 228 SPPRGWARDGPRDFGPGGPPPAR 250
>OAY53778.1 hypothetical protein MANES_03G023100 [Manihot esculenta] OAY53779.1
hypothetical protein MANES_03G023100 [Manihot esculenta]
Length = 303
Score = 47.4 bits (111), Expect(2) = 1e-08
Identities = 22/33 (66%), Positives = 27/33 (81%), Gaps = 1/33 (3%)
Frame = +2
Query: 728 RPDYLEDDFRERSRLDRPMPQLDWG-RDRGRDN 823
RPDY +DD+R R++ DR MP +DWG RDRGRDN
Sbjct: 196 RPDYPDDDYRGRNKFDRAMP-VDWGHRDRGRDN 227
Score = 43.1 bits (100), Expect(2) = 1e-08
Identities = 17/23 (73%), Positives = 18/23 (78%)
Frame = +3
Query: 654 SPPRSWARDGPRELGLGGPPHPR 722
SPPR WARDGPR+ G GGPP R
Sbjct: 160 SPPRGWARDGPRDFGPGGPPPAR 182
>XP_011009952.1 PREDICTED: polyadenylation factor subunit 2-like [Populus
euphratica]
Length = 370
Score = 45.8 bits (107), Expect(2) = 2e-08
Identities = 17/24 (70%), Positives = 20/24 (83%)
Frame = +3
Query: 654 SPPRSWARDGPRELGLGGPPHPRE 725
SPPR W+RDGPR+ G GGPP PR+
Sbjct: 229 SPPRGWSRDGPRDFGPGGPPPPRQ 252
Score = 44.3 bits (103), Expect(2) = 2e-08
Identities = 19/35 (54%), Positives = 28/35 (80%), Gaps = 1/35 (2%)
Frame = +2
Query: 725 DRPDYLEDDFRERSRLDRPMPQLDWG-RDRGRDNM 826
+R DY +D++R R++ DRPMP +DWG +DRGRD +
Sbjct: 264 ERSDYPDDEYRGRNKFDRPMP-MDWGHKDRGRDGL 297
>XP_006381723.1 RNA-binding family protein [Populus trichocarpa] ERP59520.1
RNA-binding family protein [Populus trichocarpa]
Length = 333
Score = 45.8 bits (107), Expect(2) = 2e-08
Identities = 17/24 (70%), Positives = 20/24 (83%)
Frame = +3
Query: 654 SPPRSWARDGPRELGLGGPPHPRE 725
SPPR W+RDGPR+ G GGPP PR+
Sbjct: 192 SPPRGWSRDGPRDFGPGGPPPPRQ 215
Score = 44.3 bits (103), Expect(2) = 2e-08
Identities = 19/35 (54%), Positives = 28/35 (80%), Gaps = 1/35 (2%)
Frame = +2
Query: 725 DRPDYLEDDFRERSRLDRPMPQLDWG-RDRGRDNM 826
+R DY +D++R R++ DRPMP +DWG +DRGRD +
Sbjct: 227 ERSDYPDDEYRVRNKFDRPMP-MDWGHKDRGRDGL 260
>XP_002284247.1 PREDICTED: transcription initiation factor TFIID subunit 15b [Vitis
vinifera]
Length = 360
Score = 47.8 bits (112), Expect(2) = 2e-08
Identities = 23/34 (67%), Positives = 27/34 (79%), Gaps = 1/34 (2%)
Frame = +2
Query: 725 DRPDYLEDDFRERSRLDRPMPQLDWG-RDRGRDN 823
DR DY EDD+RER++ DRP P DWG RDRGRD+
Sbjct: 255 DRLDYPEDDYRERNKFDRPAPP-DWGHRDRGRDS 287
Score = 42.0 bits (97), Expect(2) = 2e-08
Identities = 17/23 (73%), Positives = 17/23 (73%)
Frame = +3
Query: 654 SPPRSWARDGPRELGLGGPPHPR 722
SPPR WARDGPRE G G P H R
Sbjct: 220 SPPRGWARDGPREFGGGAPSHRR 242
>XP_008462733.1 PREDICTED: uncharacterized protein LOC103501026 isoform X1 [Cucumis
melo]
Length = 385
Score = 50.4 bits (119), Expect(2) = 5e-08
Identities = 24/43 (55%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Frame = +2
Query: 698 ARGSSTSQGDRPDYLEDDFRERSRLDRPMPQLDWG-RDRGRDN 823
+R S + DR DYLED FR RS+ DRP+P DW RD GRD+
Sbjct: 255 SRYSDHLRRDRVDYLEDSFRGRSKFDRPLPSADWALRDNGRDD 297
Score = 38.1 bits (87), Expect(2) = 5e-08
Identities = 16/23 (69%), Positives = 17/23 (73%)
Frame = +3
Query: 654 SPPRSWARDGPRELGLGGPPHPR 722
SPPRSWARDG RE+ GG PR
Sbjct: 230 SPPRSWARDGSREMAAGGLAPPR 252