BLASTX nr result

ID: Panax25_contig00023318 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00023318
         (352 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_015058477.1 PREDICTED: zinc finger CCCH domain-containing pro...    60   5e-08
XP_006365193.1 PREDICTED: zinc finger CCCH domain-containing pro...    60   5e-08
XP_010313261.1 PREDICTED: zinc finger CCCH domain-containing pro...    57   3e-07
XP_019242234.1 PREDICTED: uncharacterized protein LOC109222324 i...    54   1e-06
XP_016547915.1 PREDICTED: zinc finger CCCH domain-containing pro...    56   1e-06
XP_015058476.1 PREDICTED: zinc finger CCCH domain-containing pro...    55   2e-06
XP_015058475.1 PREDICTED: zinc finger CCCH domain-containing pro...    55   2e-06
XP_006365192.1 PREDICTED: zinc finger CCCH domain-containing pro...    55   2e-06
XP_006365191.1 PREDICTED: zinc finger CCCH domain-containing pro...    55   2e-06
XP_010313262.1 PREDICTED: zinc finger CCCH domain-containing pro...    54   7e-06
XP_004250919.1 PREDICTED: zinc finger CCCH domain-containing pro...    54   7e-06
XP_010313260.1 PREDICTED: zinc finger CCCH domain-containing pro...    54   7e-06

>XP_015058477.1 PREDICTED: zinc finger CCCH domain-containing protein 53 isoform X3
           [Solanum pennellii]
          Length = 686

 Score = 59.7 bits (143), Expect = 5e-08
 Identities = 29/43 (67%), Positives = 37/43 (86%)
 Frame = +2

Query: 5   AESDDSIPITTKSTSSNNVPVLPTTSSLHMASLKSCYFEMSSH 133
           AE+  S PITT +TS+NN+P+LPTT++L+MASLKSCYF M SH
Sbjct: 645 AEAGVSSPITT-ATSNNNIPMLPTTTTLNMASLKSCYFHMPSH 686


>XP_006365193.1 PREDICTED: zinc finger CCCH domain-containing protein 23 isoform X3
           [Solanum tuberosum]
          Length = 692

 Score = 59.7 bits (143), Expect = 5e-08
 Identities = 29/43 (67%), Positives = 37/43 (86%)
 Frame = +2

Query: 5   AESDDSIPITTKSTSSNNVPVLPTTSSLHMASLKSCYFEMSSH 133
           AE+  S PITT +TS+NN+P+LPTT++L+MASLKSCYF M SH
Sbjct: 651 AEAGISSPITT-ATSNNNIPMLPTTTTLNMASLKSCYFHMPSH 692


>XP_010313261.1 PREDICTED: zinc finger CCCH domain-containing protein 23 isoform X3
           [Solanum lycopersicum]
          Length = 688

 Score = 57.4 bits (137), Expect = 3e-07
 Identities = 28/43 (65%), Positives = 36/43 (83%)
 Frame = +2

Query: 5   AESDDSIPITTKSTSSNNVPVLPTTSSLHMASLKSCYFEMSSH 133
           AE+  S PITT +TS+NN+P+LPTT++L+MASLKSCYF   SH
Sbjct: 647 AEAGVSSPITT-ATSNNNIPMLPTTTTLNMASLKSCYFHRPSH 688


>XP_019242234.1 PREDICTED: uncharacterized protein LOC109222324 isoform X2
           [Nicotiana attenuata]
          Length = 125

 Score = 53.5 bits (127), Expect = 1e-06
 Identities = 27/43 (62%), Positives = 34/43 (79%)
 Frame = +2

Query: 5   AESDDSIPITTKSTSSNNVPVLPTTSSLHMASLKSCYFEMSSH 133
           AE+  S PITT  T++ N+ +LPTTS+L+MASLKSCYF M SH
Sbjct: 85  AEAGVSSPITT--TTTTNISMLPTTSTLNMASLKSCYFHMPSH 125


>XP_016547915.1 PREDICTED: zinc finger CCCH domain-containing protein 22-like
           isoform X6 [Capsicum annuum]
          Length = 697

 Score = 55.8 bits (133), Expect = 1e-06
 Identities = 28/43 (65%), Positives = 34/43 (79%)
 Frame = +2

Query: 5   AESDDSIPITTKSTSSNNVPVLPTTSSLHMASLKSCYFEMSSH 133
           AE+  S PIT    +SNN+P+LPTTS+L+MASLKSCYF M SH
Sbjct: 657 AEAGVSSPITI--ATSNNIPMLPTTSTLNMASLKSCYFHMPSH 697


>XP_015058476.1 PREDICTED: zinc finger CCCH domain-containing protein 23 isoform X2
           [Solanum pennellii]
          Length = 689

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 27/40 (67%), Positives = 35/40 (87%)
 Frame = +2

Query: 5   AESDDSIPITTKSTSSNNVPVLPTTSSLHMASLKSCYFEM 124
           AE+  S PITT +TS+NN+P+LPTT++L+MASLKSCYF M
Sbjct: 645 AEAGVSSPITT-ATSNNNIPMLPTTTTLNMASLKSCYFHM 683


>XP_015058475.1 PREDICTED: zinc finger CCCH domain-containing protein 53 isoform X1
           [Solanum pennellii]
          Length = 695

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 27/40 (67%), Positives = 35/40 (87%)
 Frame = +2

Query: 5   AESDDSIPITTKSTSSNNVPVLPTTSSLHMASLKSCYFEM 124
           AE+  S PITT +TS+NN+P+LPTT++L+MASLKSCYF M
Sbjct: 645 AEAGVSSPITT-ATSNNNIPMLPTTTTLNMASLKSCYFHM 683


>XP_006365192.1 PREDICTED: zinc finger CCCH domain-containing protein 23 isoform X2
           [Solanum tuberosum]
          Length = 695

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 27/40 (67%), Positives = 35/40 (87%)
 Frame = +2

Query: 5   AESDDSIPITTKSTSSNNVPVLPTTSSLHMASLKSCYFEM 124
           AE+  S PITT +TS+NN+P+LPTT++L+MASLKSCYF M
Sbjct: 651 AEAGISSPITT-ATSNNNIPMLPTTTTLNMASLKSCYFHM 689


>XP_006365191.1 PREDICTED: zinc finger CCCH domain-containing protein 53 isoform X1
           [Solanum tuberosum]
          Length = 701

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 27/40 (67%), Positives = 35/40 (87%)
 Frame = +2

Query: 5   AESDDSIPITTKSTSSNNVPVLPTTSSLHMASLKSCYFEM 124
           AE+  S PITT +TS+NN+P+LPTT++L+MASLKSCYF M
Sbjct: 651 AEAGISSPITT-ATSNNNIPMLPTTTTLNMASLKSCYFHM 689


>XP_010313262.1 PREDICTED: zinc finger CCCH domain-containing protein 22 isoform X4
           [Solanum lycopersicum]
          Length = 682

 Score = 53.5 bits (127), Expect = 7e-06
 Identities = 26/38 (68%), Positives = 34/38 (89%)
 Frame = +2

Query: 5   AESDDSIPITTKSTSSNNVPVLPTTSSLHMASLKSCYF 118
           AE+  S PITT +TS+NN+P+LPTT++L+MASLKSCYF
Sbjct: 632 AEAGVSSPITT-ATSNNNIPMLPTTTTLNMASLKSCYF 668


>XP_004250919.1 PREDICTED: zinc finger CCCH domain-containing protein 23 isoform X2
           [Solanum lycopersicum]
          Length = 691

 Score = 53.5 bits (127), Expect = 7e-06
 Identities = 26/38 (68%), Positives = 34/38 (89%)
 Frame = +2

Query: 5   AESDDSIPITTKSTSSNNVPVLPTTSSLHMASLKSCYF 118
           AE+  S PITT +TS+NN+P+LPTT++L+MASLKSCYF
Sbjct: 647 AEAGVSSPITT-ATSNNNIPMLPTTTTLNMASLKSCYF 683


>XP_010313260.1 PREDICTED: zinc finger CCCH domain-containing protein 23 isoform X1
           [Solanum lycopersicum]
          Length = 697

 Score = 53.5 bits (127), Expect = 7e-06
 Identities = 26/38 (68%), Positives = 34/38 (89%)
 Frame = +2

Query: 5   AESDDSIPITTKSTSSNNVPVLPTTSSLHMASLKSCYF 118
           AE+  S PITT +TS+NN+P+LPTT++L+MASLKSCYF
Sbjct: 647 AEAGVSSPITT-ATSNNNIPMLPTTTTLNMASLKSCYF 683


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