BLASTX nr result
ID: Panax25_contig00023160
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax25_contig00023160
(583 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_017240287.1 PREDICTED: DNA-directed RNA polymerases II and IV... 193 3e-59
XP_012076737.1 PREDICTED: DNA-directed RNA polymerases II and IV... 193 3e-59
XP_011014255.1 PREDICTED: DNA-directed RNA polymerases II and IV... 192 6e-59
XP_006381734.1 DNA-directed RNA polymerase family protein [Popul... 192 6e-59
XP_015571646.1 PREDICTED: DNA-directed RNA polymerases II and IV... 192 8e-59
CBI28035.3 unnamed protein product, partial [Vitis vinifera] 191 9e-59
XP_013688168.1 PREDICTED: DNA-directed RNA polymerases II and IV... 189 1e-58
XP_010107375.1 DNA-directed RNA polymerases I, II, and III subun... 193 1e-58
EEF48219.1 DNA-directed RNA polymerase II, putative [Ricinus com... 192 1e-58
OAY27272.1 hypothetical protein MANES_16G112700 [Manihot esculen... 191 2e-58
XP_011097502.1 PREDICTED: DNA-directed RNA polymerases II and IV... 191 2e-58
XP_002284107.1 PREDICTED: DNA-directed RNA polymerases II and IV... 191 2e-58
XP_010047920.1 PREDICTED: DNA-directed RNA polymerases II and IV... 191 2e-58
XP_012080620.1 PREDICTED: DNA-directed RNA polymerases II and IV... 191 2e-58
XP_006451215.1 hypothetical protein CICLE_v10009504mg [Citrus cl... 191 2e-58
KVI11582.1 DNA-directed RNA polymerase, RPB5 subunit [Cynara car... 190 4e-58
XP_016448618.1 PREDICTED: DNA-directed RNA polymerases II and IV... 187 7e-58
XP_006298572.1 hypothetical protein CARUB_v10014656mg [Capsella ... 189 9e-58
XP_012841243.1 PREDICTED: DNA-directed RNA polymerases II and IV... 189 9e-58
NP_188871.1 Eukaryotic rpb5 RNA polymerase subunit family protei... 189 1e-57
>XP_017240287.1 PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
[Daucus carota subsp. sativus] XP_017240288.1 PREDICTED:
DNA-directed RNA polymerases II and IV subunit 5A-like
[Daucus carota subsp. sativus] XP_017240289.1 PREDICTED:
DNA-directed RNA polymerases II and IV subunit 5A-like
[Daucus carota subsp. sativus] KZN03304.1 hypothetical
protein DCAR_012060 [Daucus carota subsp. sativus]
Length = 206
Score = 193 bits (490), Expect = 3e-59
Identities = 96/102 (94%), Positives = 99/102 (97%)
Frame = +1
Query: 1 NLTPFARTCIAEISTKFQLEVFQEAELLVNIKEHVLVPEHQVLTNEEKKTLLERYTVKET 180
NLTPFARTCIAEIS+KF LEVFQEAELLVNIKEHVLVPEHQVLT +EKKTLLERYTVKET
Sbjct: 105 NLTPFARTCIAEISSKFNLEVFQEAELLVNIKEHVLVPEHQVLTKDEKKTLLERYTVKET 164
Query: 181 QLPRIQLSDPIARYYGLTRGQVVKIIRPSETAGRYVTYRYVV 306
QLPRIQLSDP+ARYYGL RGQVVKIIRPSETAGRYVTYRYVV
Sbjct: 165 QLPRIQLSDPVARYYGLQRGQVVKIIRPSETAGRYVTYRYVV 206
>XP_012076737.1 PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
[Jatropha curcas] KDP33706.1 hypothetical protein
JCGZ_07277 [Jatropha curcas]
Length = 206
Score = 193 bits (490), Expect = 3e-59
Identities = 94/102 (92%), Positives = 101/102 (99%)
Frame = +1
Query: 1 NLTPFARTCIAEISTKFQLEVFQEAELLVNIKEHVLVPEHQVLTNEEKKTLLERYTVKET 180
NLTPFARTCIAEI++KFQLEVFQEAELLVNIKEHVLVPEHQVLTNEEKKTLLERYTVKET
Sbjct: 105 NLTPFARTCIAEIASKFQLEVFQEAELLVNIKEHVLVPEHQVLTNEEKKTLLERYTVKET 164
Query: 181 QLPRIQLSDPIARYYGLTRGQVVKIIRPSETAGRYVTYRYVV 306
QLPR+Q++DPIARYYGL RGQVVKIIRPSETAGRY+TYR+VV
Sbjct: 165 QLPRVQVTDPIARYYGLKRGQVVKIIRPSETAGRYITYRFVV 206
>XP_011014255.1 PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A
[Populus euphratica]
Length = 206
Score = 192 bits (488), Expect = 6e-59
Identities = 95/102 (93%), Positives = 99/102 (97%)
Frame = +1
Query: 1 NLTPFARTCIAEISTKFQLEVFQEAELLVNIKEHVLVPEHQVLTNEEKKTLLERYTVKET 180
NLTPFARTCI EISTKF LEVFQEAELLVNIKEHVLVPEHQVL+NEEKKTLLERYTVKET
Sbjct: 105 NLTPFARTCINEISTKFHLEVFQEAELLVNIKEHVLVPEHQVLSNEEKKTLLERYTVKET 164
Query: 181 QLPRIQLSDPIARYYGLTRGQVVKIIRPSETAGRYVTYRYVV 306
QLPRIQ++DPIARYYGL RGQVVKIIRPSETAGRYVTYRYV+
Sbjct: 165 QLPRIQITDPIARYYGLKRGQVVKIIRPSETAGRYVTYRYVI 206
>XP_006381734.1 DNA-directed RNA polymerase family protein [Populus trichocarpa]
ERP59531.1 DNA-directed RNA polymerase family protein
[Populus trichocarpa]
Length = 206
Score = 192 bits (488), Expect = 6e-59
Identities = 95/102 (93%), Positives = 99/102 (97%)
Frame = +1
Query: 1 NLTPFARTCIAEISTKFQLEVFQEAELLVNIKEHVLVPEHQVLTNEEKKTLLERYTVKET 180
NLTPFARTCI EISTKF LEVFQEAELLVNIKEHVLVPEHQVL+NEEKKTLLERYTVKET
Sbjct: 105 NLTPFARTCINEISTKFHLEVFQEAELLVNIKEHVLVPEHQVLSNEEKKTLLERYTVKET 164
Query: 181 QLPRIQLSDPIARYYGLTRGQVVKIIRPSETAGRYVTYRYVV 306
QLPRIQ++DPIARYYGL RGQVVKIIRPSETAGRYVTYRYV+
Sbjct: 165 QLPRIQITDPIARYYGLKRGQVVKIIRPSETAGRYVTYRYVI 206
>XP_015571646.1 PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A
[Ricinus communis]
Length = 205
Score = 192 bits (487), Expect = 8e-59
Identities = 95/102 (93%), Positives = 100/102 (98%)
Frame = +1
Query: 1 NLTPFARTCIAEISTKFQLEVFQEAELLVNIKEHVLVPEHQVLTNEEKKTLLERYTVKET 180
+LTPFARTCIAEI++KF LEVFQE+ELLVNIKEHVLVPEHQVLTNEEKKTLLERYTVKET
Sbjct: 104 SLTPFARTCIAEIASKFHLEVFQESELLVNIKEHVLVPEHQVLTNEEKKTLLERYTVKET 163
Query: 181 QLPRIQLSDPIARYYGLTRGQVVKIIRPSETAGRYVTYRYVV 306
QLPRIQ+SDPIARYYGL RGQVVKIIRPSETAGRYVTYRYVV
Sbjct: 164 QLPRIQISDPIARYYGLKRGQVVKIIRPSETAGRYVTYRYVV 205
>CBI28035.3 unnamed protein product, partial [Vitis vinifera]
Length = 186
Score = 191 bits (485), Expect = 9e-59
Identities = 95/102 (93%), Positives = 99/102 (97%)
Frame = +1
Query: 1 NLTPFARTCIAEISTKFQLEVFQEAELLVNIKEHVLVPEHQVLTNEEKKTLLERYTVKET 180
NLTPFARTCI EISTKF LEVFQEAELLVNIKEHVLVPEHQVLT+EEKKTLLERYTVKET
Sbjct: 85 NLTPFARTCINEISTKFHLEVFQEAELLVNIKEHVLVPEHQVLTSEEKKTLLERYTVKET 144
Query: 181 QLPRIQLSDPIARYYGLTRGQVVKIIRPSETAGRYVTYRYVV 306
QLPRIQ+SDPIARY+GL RGQVVKIIRPSETAGRY+TYRYVV
Sbjct: 145 QLPRIQVSDPIARYFGLKRGQVVKIIRPSETAGRYITYRYVV 186
>XP_013688168.1 PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A
[Brassica napus]
Length = 124
Score = 189 bits (479), Expect = 1e-58
Identities = 93/102 (91%), Positives = 99/102 (97%)
Frame = +1
Query: 1 NLTPFARTCIAEISTKFQLEVFQEAELLVNIKEHVLVPEHQVLTNEEKKTLLERYTVKET 180
NLTPFARTCI+EIS+KF LEVFQEAE+LVNIKEHVLVPEHQVLT EEKKTLLERYTVKET
Sbjct: 23 NLTPFARTCISEISSKFHLEVFQEAEMLVNIKEHVLVPEHQVLTTEEKKTLLERYTVKET 82
Query: 181 QLPRIQLSDPIARYYGLTRGQVVKIIRPSETAGRYVTYRYVV 306
QLPRIQ++DPIARY+GL RGQVVKIIRPSETAGRYVTYRYVV
Sbjct: 83 QLPRIQVTDPIARYFGLKRGQVVKIIRPSETAGRYVTYRYVV 124
>XP_010107375.1 DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Morus
notabilis] EXC15864.1 DNA-directed RNA polymerases I,
II, and III subunit RPABC1 [Morus notabilis]
Length = 253
Score = 193 bits (490), Expect = 1e-58
Identities = 95/101 (94%), Positives = 99/101 (98%)
Frame = +1
Query: 1 NLTPFARTCIAEISTKFQLEVFQEAELLVNIKEHVLVPEHQVLTNEEKKTLLERYTVKET 180
NLTPFARTCI+EISTKF LEVFQEAELLVNIKEHVLVPEHQVLTNEEKKTLLERYTVKET
Sbjct: 105 NLTPFARTCISEISTKFHLEVFQEAELLVNIKEHVLVPEHQVLTNEEKKTLLERYTVKET 164
Query: 181 QLPRIQLSDPIARYYGLTRGQVVKIIRPSETAGRYVTYRYV 303
QLPRIQ++DPIARYYGL RGQVVKIIRPSETAGRY+TYRYV
Sbjct: 165 QLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRYITYRYV 205
>EEF48219.1 DNA-directed RNA polymerase II, putative [Ricinus communis]
Length = 225
Score = 192 bits (487), Expect = 1e-58
Identities = 95/102 (93%), Positives = 100/102 (98%)
Frame = +1
Query: 1 NLTPFARTCIAEISTKFQLEVFQEAELLVNIKEHVLVPEHQVLTNEEKKTLLERYTVKET 180
+LTPFARTCIAEI++KF LEVFQE+ELLVNIKEHVLVPEHQVLTNEEKKTLLERYTVKET
Sbjct: 124 SLTPFARTCIAEIASKFHLEVFQESELLVNIKEHVLVPEHQVLTNEEKKTLLERYTVKET 183
Query: 181 QLPRIQLSDPIARYYGLTRGQVVKIIRPSETAGRYVTYRYVV 306
QLPRIQ+SDPIARYYGL RGQVVKIIRPSETAGRYVTYRYVV
Sbjct: 184 QLPRIQISDPIARYYGLKRGQVVKIIRPSETAGRYVTYRYVV 225
>OAY27272.1 hypothetical protein MANES_16G112700 [Manihot esculenta] OAY27273.1
hypothetical protein MANES_16G112700 [Manihot esculenta]
Length = 206
Score = 191 bits (485), Expect = 2e-58
Identities = 94/102 (92%), Positives = 100/102 (98%)
Frame = +1
Query: 1 NLTPFARTCIAEISTKFQLEVFQEAELLVNIKEHVLVPEHQVLTNEEKKTLLERYTVKET 180
NLTPFARTCI+EI+ KFQLEVFQEAELLVNIKEHVLVPEHQVLT+EEKKTLLERYTVKET
Sbjct: 105 NLTPFARTCISEIAAKFQLEVFQEAELLVNIKEHVLVPEHQVLTSEEKKTLLERYTVKET 164
Query: 181 QLPRIQLSDPIARYYGLTRGQVVKIIRPSETAGRYVTYRYVV 306
QLPRIQ+SDPIARYYGL RGQVVKIIRPSETAGRY+TYR+VV
Sbjct: 165 QLPRIQVSDPIARYYGLKRGQVVKIIRPSETAGRYITYRFVV 206
>XP_011097502.1 PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A
[Sesamum indicum] XP_011097515.1 PREDICTED: DNA-directed
RNA polymerases II and IV subunit 5A [Sesamum indicum]
Length = 206
Score = 191 bits (485), Expect = 2e-58
Identities = 95/102 (93%), Positives = 99/102 (97%)
Frame = +1
Query: 1 NLTPFARTCIAEISTKFQLEVFQEAELLVNIKEHVLVPEHQVLTNEEKKTLLERYTVKET 180
NLTPFARTCI+EISTKF LEVFQEAELLVNIKEHVLVP+HQVLT EEKKTLLERYTVKET
Sbjct: 105 NLTPFARTCISEISTKFHLEVFQEAELLVNIKEHVLVPQHQVLTPEEKKTLLERYTVKET 164
Query: 181 QLPRIQLSDPIARYYGLTRGQVVKIIRPSETAGRYVTYRYVV 306
QLPRIQ++DPIARYYGL RGQVVKIIRPSETAGRYVTYRYVV
Sbjct: 165 QLPRIQITDPIARYYGLKRGQVVKIIRPSETAGRYVTYRYVV 206
>XP_002284107.1 PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A [Vitis
vinifera] XP_002284110.1 PREDICTED: DNA-directed RNA
polymerases II and IV subunit 5A [Vitis vinifera]
Length = 206
Score = 191 bits (485), Expect = 2e-58
Identities = 95/102 (93%), Positives = 99/102 (97%)
Frame = +1
Query: 1 NLTPFARTCIAEISTKFQLEVFQEAELLVNIKEHVLVPEHQVLTNEEKKTLLERYTVKET 180
NLTPFARTCI EISTKF LEVFQEAELLVNIKEHVLVPEHQVLT+EEKKTLLERYTVKET
Sbjct: 105 NLTPFARTCINEISTKFHLEVFQEAELLVNIKEHVLVPEHQVLTSEEKKTLLERYTVKET 164
Query: 181 QLPRIQLSDPIARYYGLTRGQVVKIIRPSETAGRYVTYRYVV 306
QLPRIQ+SDPIARY+GL RGQVVKIIRPSETAGRY+TYRYVV
Sbjct: 165 QLPRIQVSDPIARYFGLKRGQVVKIIRPSETAGRYITYRYVV 206
>XP_010047920.1 PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A
[Eucalyptus grandis] XP_018726012.1 PREDICTED:
DNA-directed RNA polymerases II and IV subunit 5A
[Eucalyptus grandis] KCW79948.1 hypothetical protein
EUGRSUZ_C01278 [Eucalyptus grandis]
Length = 220
Score = 191 bits (486), Expect = 2e-58
Identities = 94/102 (92%), Positives = 99/102 (97%)
Frame = +1
Query: 1 NLTPFARTCIAEISTKFQLEVFQEAELLVNIKEHVLVPEHQVLTNEEKKTLLERYTVKET 180
NLTPFARTCI+EISTKF LEVFQEAELLVNIKEHVLVPEHQVL NEEKKTLL+RYTVKET
Sbjct: 119 NLTPFARTCISEISTKFHLEVFQEAELLVNIKEHVLVPEHQVLANEEKKTLLQRYTVKET 178
Query: 181 QLPRIQLSDPIARYYGLTRGQVVKIIRPSETAGRYVTYRYVV 306
QLPRIQ++DP+ARYYGL RGQVVKIIRPSETAGRYVTYRYVV
Sbjct: 179 QLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTYRYVV 220
>XP_012080620.1 PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
[Jatropha curcas] XP_012080621.1 PREDICTED: DNA-directed
RNA polymerases II and IV subunit 5A-like [Jatropha
curcas] KDP30787.1 hypothetical protein JCGZ_13730
[Jatropha curcas]
Length = 206
Score = 191 bits (484), Expect = 2e-58
Identities = 93/102 (91%), Positives = 101/102 (99%)
Frame = +1
Query: 1 NLTPFARTCIAEISTKFQLEVFQEAELLVNIKEHVLVPEHQVLTNEEKKTLLERYTVKET 180
NLTPFARTCI+EI++KFQLEVFQEAELLVNIKEHVLVPEHQVLTNEEKKTLLERYTVKET
Sbjct: 105 NLTPFARTCISEIASKFQLEVFQEAELLVNIKEHVLVPEHQVLTNEEKKTLLERYTVKET 164
Query: 181 QLPRIQLSDPIARYYGLTRGQVVKIIRPSETAGRYVTYRYVV 306
QLPRIQ++DPIARY+GL RGQVVKIIRPSETAGRY+TYR+VV
Sbjct: 165 QLPRIQVTDPIARYFGLKRGQVVKIIRPSETAGRYITYRFVV 206
>XP_006451215.1 hypothetical protein CICLE_v10009504mg [Citrus clementina]
XP_006451216.1 hypothetical protein CICLE_v10009504mg
[Citrus clementina] XP_006475671.1 PREDICTED:
DNA-directed RNA polymerases II and IV subunit 5A
[Citrus sinensis] XP_006475672.1 PREDICTED: DNA-directed
RNA polymerases II and IV subunit 5A [Citrus sinensis]
ESR64455.1 hypothetical protein CICLE_v10009504mg
[Citrus clementina] ESR64456.1 hypothetical protein
CICLE_v10009504mg [Citrus clementina]
Length = 206
Score = 191 bits (484), Expect = 2e-58
Identities = 95/102 (93%), Positives = 98/102 (96%)
Frame = +1
Query: 1 NLTPFARTCIAEISTKFQLEVFQEAELLVNIKEHVLVPEHQVLTNEEKKTLLERYTVKET 180
NLTPFARTCI EIS KF LEVFQEAELLVNIKEHVLVPEHQVLTNEEKKTLL+RYTVKET
Sbjct: 105 NLTPFARTCIQEISAKFHLEVFQEAELLVNIKEHVLVPEHQVLTNEEKKTLLKRYTVKET 164
Query: 181 QLPRIQLSDPIARYYGLTRGQVVKIIRPSETAGRYVTYRYVV 306
QLPRIQ++DPIARYYGL RGQVVKIIRPSETAGRYVTYRYVV
Sbjct: 165 QLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRYVTYRYVV 206
>KVI11582.1 DNA-directed RNA polymerase, RPB5 subunit [Cynara cardunculus var.
scolymus]
Length = 208
Score = 190 bits (483), Expect = 4e-58
Identities = 93/102 (91%), Positives = 98/102 (96%)
Frame = +1
Query: 1 NLTPFARTCIAEISTKFQLEVFQEAELLVNIKEHVLVPEHQVLTNEEKKTLLERYTVKET 180
NLTPFARTCI+EISTKF LEVFQEAELLVN+K HVLVPEHQVL NEEKKTLLERYTVKET
Sbjct: 107 NLTPFARTCISEISTKFHLEVFQEAELLVNVKNHVLVPEHQVLANEEKKTLLERYTVKET 166
Query: 181 QLPRIQLSDPIARYYGLTRGQVVKIIRPSETAGRYVTYRYVV 306
QLPRIQ++DP+ARYYGL RGQVVKIIRPSETAGRYVTYRYVV
Sbjct: 167 QLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTYRYVV 208
>XP_016448618.1 PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like,
partial [Nicotiana tabacum]
Length = 151
Score = 187 bits (476), Expect = 7e-58
Identities = 93/102 (91%), Positives = 97/102 (95%)
Frame = +1
Query: 1 NLTPFARTCIAEISTKFQLEVFQEAELLVNIKEHVLVPEHQVLTNEEKKTLLERYTVKET 180
NLTPFARTCI+EISTKF LEVFQEAELLVNIK HVLVPEHQ LT EEKKTLLERYTVKET
Sbjct: 50 NLTPFARTCISEISTKFHLEVFQEAELLVNIKNHVLVPEHQPLTPEEKKTLLERYTVKET 109
Query: 181 QLPRIQLSDPIARYYGLTRGQVVKIIRPSETAGRYVTYRYVV 306
QLPRIQ++DPIARYYGL RGQVVKIIRPSETAGRY+TYRYVV
Sbjct: 110 QLPRIQITDPIARYYGLKRGQVVKIIRPSETAGRYITYRYVV 151
>XP_006298572.1 hypothetical protein CARUB_v10014656mg [Capsella rubella]
EOA31470.1 hypothetical protein CARUB_v10014656mg
[Capsella rubella]
Length = 205
Score = 189 bits (480), Expect = 9e-58
Identities = 93/102 (91%), Positives = 100/102 (98%)
Frame = +1
Query: 1 NLTPFARTCIAEISTKFQLEVFQEAELLVNIKEHVLVPEHQVLTNEEKKTLLERYTVKET 180
NLTPFARTCI+EIS+KF LEVFQEAE+LVNIKEHVLVPEHQVLT+EEKKTLLERYTVKET
Sbjct: 104 NLTPFARTCISEISSKFHLEVFQEAEMLVNIKEHVLVPEHQVLTSEEKKTLLERYTVKET 163
Query: 181 QLPRIQLSDPIARYYGLTRGQVVKIIRPSETAGRYVTYRYVV 306
QLPRIQ++DPIARY+GL RGQVVKIIRPSETAGRYVTYRYVV
Sbjct: 164 QLPRIQVTDPIARYFGLKRGQVVKIIRPSETAGRYVTYRYVV 205
>XP_012841243.1 PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A
[Erythranthe guttata] XP_012841244.1 PREDICTED:
DNA-directed RNA polymerases II and IV subunit 5A
[Erythranthe guttata] EYU34199.1 hypothetical protein
MIMGU_mgv1a013932mg [Erythranthe guttata]
Length = 206
Score = 189 bits (480), Expect = 9e-58
Identities = 93/102 (91%), Positives = 98/102 (96%)
Frame = +1
Query: 1 NLTPFARTCIAEISTKFQLEVFQEAELLVNIKEHVLVPEHQVLTNEEKKTLLERYTVKET 180
NLTPFARTCI+EISTKF LEVFQEAE+L+NIKEHVLVPEHQVLT EEKKTLLERYTVKET
Sbjct: 105 NLTPFARTCISEISTKFHLEVFQEAEMLINIKEHVLVPEHQVLTPEEKKTLLERYTVKET 164
Query: 181 QLPRIQLSDPIARYYGLTRGQVVKIIRPSETAGRYVTYRYVV 306
QLPRIQ++DPIARYYGL RG VVKIIRPSETAGRYVTYRYVV
Sbjct: 165 QLPRIQITDPIARYYGLKRGHVVKIIRPSETAGRYVTYRYVV 206
>NP_188871.1 Eukaryotic rpb5 RNA polymerase subunit family protein [Arabidopsis
thaliana] O81098.1 RecName: Full=DNA-directed RNA
polymerases II and IV subunit 5A; Short=RPB5a; AltName:
Full=DNA-directed RNA polymerase II subunit E; AltName:
Full=RNA polymerase I, II and III 24.3 kDa subunit;
Short=AtRPB24.3 AAK48978.1 RNA polymerase I, II and III
24.3 kDa subunit [Arabidopsis thaliana] AAL06554.1
AT3g22320/MCB17_5 [Arabidopsis thaliana] AAC28253.1 RNA
polymerase I, II and III 24.3 kDa subunit [Arabidopsis
thaliana] BAB01769.1 RNA polymerase I, II and III 24.3
kDa subunit [Arabidopsis thaliana] AAM63355.1 RNA
polymerase I, II and III 24.3 kDa subunit [Arabidopsis
thaliana] AAN72141.1 RNA polymerase I, II and III 24.3
kDa subunit [Arabidopsis thaliana] AEE76621.1 Eukaryotic
rpb5 RNA polymerase subunit family protein [Arabidopsis
thaliana] OAP06120.1 RPB5A [Arabidopsis thaliana]
Length = 205
Score = 189 bits (479), Expect = 1e-57
Identities = 93/102 (91%), Positives = 99/102 (97%)
Frame = +1
Query: 1 NLTPFARTCIAEISTKFQLEVFQEAELLVNIKEHVLVPEHQVLTNEEKKTLLERYTVKET 180
NLTPFARTCI+EIS+KF LEVFQEAE+LVNIKEHVLVPEHQVLT EEKKTLLERYTVKET
Sbjct: 104 NLTPFARTCISEISSKFHLEVFQEAEMLVNIKEHVLVPEHQVLTTEEKKTLLERYTVKET 163
Query: 181 QLPRIQLSDPIARYYGLTRGQVVKIIRPSETAGRYVTYRYVV 306
QLPRIQ++DPIARY+GL RGQVVKIIRPSETAGRYVTYRYVV
Sbjct: 164 QLPRIQVTDPIARYFGLKRGQVVKIIRPSETAGRYVTYRYVV 205