BLASTX nr result
ID: Panax25_contig00023143
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax25_contig00023143
(595 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_009776250.1 PREDICTED: pentatricopeptide repeat-containing pr... 60 7e-10
XP_009602546.1 PREDICTED: pentatricopeptide repeat-containing pr... 59 3e-09
XP_017253703.1 PREDICTED: pentatricopeptide repeat-containing pr... 54 6e-09
XP_009602545.1 PREDICTED: pentatricopeptide repeat-containing pr... 59 2e-08
XP_012831937.1 PREDICTED: pentatricopeptide repeat-containing pr... 49 2e-07
OIT21153.1 pentatricopeptide repeat-containing protein, chloropl... 57 3e-06
XP_019239264.1 PREDICTED: pentatricopeptide repeat-containing pr... 57 3e-06
>XP_009776250.1 PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
chloroplastic [Nicotiana sylvestris] XP_016463308.1
PREDICTED: pentatricopeptide repeat-containing protein
At5g02830, chloroplastic-like [Nicotiana tabacum]
Length = 857
Score = 60.5 bits (145), Expect(2) = 7e-10
Identities = 27/52 (51%), Positives = 43/52 (82%)
Frame = +3
Query: 294 VKPSQFVALLNSELVSMGVVEMVEKGEIRRLVDALSGAQKLGIGPLELFGGA 449
V ++F ALLN+++VS G+V ++E+G+++ +V+ L+GAQKLGI PL+LF GA
Sbjct: 104 VNAAEFAALLNAKIVSDGIVRLLEEGKLKSVVELLTGAQKLGIEPLKLFDGA 155
Score = 30.4 bits (67), Expect(2) = 7e-10
Identities = 25/82 (30%), Positives = 32/82 (39%), Gaps = 39/82 (47%)
Frame = +2
Query: 467 RECCLIVKRGEVEELVDLMGILGGNLM--------------------------------- 547
REC ++ GE+EE+V LM L G M
Sbjct: 162 RECRRTMECGEIEEVVSLMETLKGCGMPIKDLVKPSEVIRLCISQRKPNTAVRYAHIFPH 221
Query: 548 ------SIILQFGKKGDLVSAL 595
++IL+FGKKGDL SAL
Sbjct: 222 VDIMFCTVILEFGKKGDLASAL 243
>XP_009602546.1 PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
chloroplastic isoform X2 [Nicotiana tomentosiformis]
XP_016469098.1 PREDICTED: pentatricopeptide
repeat-containing protein At5g02830, chloroplastic-like
isoform X2 [Nicotiana tabacum]
Length = 849
Score = 59.3 bits (142), Expect(2) = 3e-09
Identities = 27/52 (51%), Positives = 42/52 (80%)
Frame = +3
Query: 294 VKPSQFVALLNSELVSMGVVEMVEKGEIRRLVDALSGAQKLGIGPLELFGGA 449
V ++F ALLN+++VS G+V ++E+G++R +V+ L+GAQKLGI PL+L GA
Sbjct: 96 VNAAEFAALLNAKIVSDGIVRLLEEGKLRSVVELLTGAQKLGIEPLKLLDGA 147
Score = 29.6 bits (65), Expect(2) = 3e-09
Identities = 25/82 (30%), Positives = 31/82 (37%), Gaps = 39/82 (47%)
Frame = +2
Query: 467 RECCLIVKRGEVEELVDLMGILGGNLM--------------------------------- 547
REC ++ GE+EE V LM L G M
Sbjct: 154 RECRRTMECGEIEEAVSLMETLKGCGMPIKELVKPSEIIRLCISQRKPNTAVRYAHIFPH 213
Query: 548 ------SIILQFGKKGDLVSAL 595
++IL+FGKKGDL SAL
Sbjct: 214 VDIMFCTVILEFGKKGDLASAL 235
>XP_017253703.1 PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
chloroplastic [Daucus carota subsp. sativus] KZM94478.1
hypothetical protein DCAR_017721 [Daucus carota subsp.
sativus]
Length = 827
Score = 53.5 bits (127), Expect(2) = 6e-09
Identities = 25/49 (51%), Positives = 34/49 (69%)
Frame = +3
Query: 294 VKPSQFVALLNSELVSMGVVEMVEKGEIRRLVDALSGAQKLGIGPLELF 440
VK S F L+N +LVS G++ M+ G++ R+V LSGAQKLG+ ELF
Sbjct: 88 VKVSDFANLINVDLVSKGLIRMLRSGDVERVVQVLSGAQKLGLSVAELF 136
Score = 34.3 bits (77), Expect(2) = 6e-09
Identities = 23/82 (28%), Positives = 34/82 (41%), Gaps = 39/82 (47%)
Frame = +2
Query: 467 RECCLIVKRGEVEELVDLMGILGGNLM--------------------------------- 547
+EC L+ +RG VE +VDL+ +L G +
Sbjct: 146 KECSLVAERGNVEAVVDLLEVLSGFQLSVKEIVDPARIIKICVAQRKPNVAIRCARNFPT 205
Query: 548 ------SIILQFGKKGDLVSAL 595
SIIL+FGKKGD++ A+
Sbjct: 206 AHILFCSIILEFGKKGDIMCAM 227
>XP_009602545.1 PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
chloroplastic isoform X1 [Nicotiana tomentosiformis]
XP_016469097.1 PREDICTED: pentatricopeptide
repeat-containing protein At5g02830, chloroplastic-like
isoform X1 [Nicotiana tabacum]
Length = 856
Score = 59.3 bits (142), Expect(2) = 2e-08
Identities = 27/52 (51%), Positives = 42/52 (80%)
Frame = +3
Query: 294 VKPSQFVALLNSELVSMGVVEMVEKGEIRRLVDALSGAQKLGIGPLELFGGA 449
V ++F ALLN+++VS G+V ++E+G++R +V+ L+GAQKLGI PL+L GA
Sbjct: 96 VNAAEFAALLNAKIVSDGIVRLLEEGKLRSVVELLTGAQKLGIEPLKLLDGA 147
Score = 26.9 bits (58), Expect(2) = 2e-08
Identities = 25/89 (28%), Positives = 31/89 (34%), Gaps = 46/89 (51%)
Frame = +2
Query: 467 RECCLIVKRGEVEELVDLMGILGGNLM--------------------------------- 547
REC ++ GE+EE V LM L G M
Sbjct: 154 RECRRTMECGEIEEAVSLMETLKGCGMPIKELVKPSEIIRLCISQRKPNTAVSSIMTLCR 213
Query: 548 -------------SIILQFGKKGDLVSAL 595
++IL+FGKKGDL SAL
Sbjct: 214 YAHIFPHVDIMFCTVILEFGKKGDLASAL 242
>XP_012831937.1 PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
chloroplastic [Erythranthe guttata] EYU41644.1
hypothetical protein MIMGU_mgv1a001284mg [Erythranthe
guttata]
Length = 847
Score = 48.9 bits (115), Expect(2) = 2e-07
Identities = 24/56 (42%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
Frame = +3
Query: 276 VSSGRIVKPSQFVALLNSELVSMGVVEMVEKGEIRRLVDAL-SGAQKLGIGPLELF 440
V+SG VKPS+F+ALLN++ V++GV ++++G + +V L +G +K+GI P+++F
Sbjct: 97 VASG--VKPSEFLALLNAKCVAIGVARVLDEGNLHSVVKMLFNGLEKIGIDPVQMF 150
Score = 33.9 bits (76), Expect(2) = 2e-07
Identities = 27/82 (32%), Positives = 31/82 (37%), Gaps = 39/82 (47%)
Frame = +2
Query: 467 RECCLIVKRGEVEELVDLMGILGG------------------------------------ 538
REC ++KRGEVE+LV M L G
Sbjct: 160 RECRRLLKRGEVEQLVSFMETLAGFKFQIRELVEPSDVISLCISQRDPTAAIRYAQNFPH 219
Query: 539 ---NLMSIILQFGKKGDLVSAL 595
SIIL+FGKK DL SAL
Sbjct: 220 MEIMFCSIILEFGKKRDLASAL 241
>OIT21153.1 pentatricopeptide repeat-containing protein, chloroplastic
[Nicotiana attenuata]
Length = 867
Score = 57.4 bits (137), Expect = 3e-06
Identities = 26/52 (50%), Positives = 41/52 (78%)
Frame = +3
Query: 294 VKPSQFVALLNSELVSMGVVEMVEKGEIRRLVDALSGAQKLGIGPLELFGGA 449
V ++F ALLN+++VS G+V ++E+G++R +V+ L+GA KLGI PL+L GA
Sbjct: 104 VNAAEFAALLNAKIVSDGIVRLLEEGKLRSVVELLTGAHKLGIEPLKLLDGA 155
>XP_019239264.1 PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
chloroplastic [Nicotiana attenuata]
Length = 903
Score = 57.4 bits (137), Expect = 3e-06
Identities = 26/52 (50%), Positives = 41/52 (78%)
Frame = +3
Query: 294 VKPSQFVALLNSELVSMGVVEMVEKGEIRRLVDALSGAQKLGIGPLELFGGA 449
V ++F ALLN+++VS G+V ++E+G++R +V+ L+GA KLGI PL+L GA
Sbjct: 140 VNAAEFAALLNAKIVSDGIVRLLEEGKLRSVVELLTGAHKLGIEPLKLLDGA 191